mRNA_A-nodosum_M_contig821.20.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig821.20.1 vs. uniprot
Match: D7FUB8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUB8_ECTSI) HSP 1 Score: 283 bits (724), Expect = 2.240e-91 Identity = 136/173 (78.61%), Postives = 156/173 (90.17%), Query Frame = 2
Query: 98 PLSMAIKAVESYNADFELEEKTATTLDGYLRHPDMIAEVCKQFDCERAEYMGEIFQPVPYSSATPRGMPTDIEDKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYRIDGMSDAARQAFQERAGRVRENDRQKKDESELESEWDDIGSAFAEVHKMSLGSQDDDLDLDSMVV 616
PLSMAI+AVES+NADFELEEKTA TLDGYLRH DMIAEVCKQFDCE AEY+GEIFQPVPYS ATP+GMP DIE+K+FLNEQYGIANIPPVVMFNAKIFKPSRLCAVY++DG+S+ A+ ER R+REN+++KK+E+ELE+ WDDIGSAF EVH M +GS DDD+DLDSMVV
Sbjct: 58 PLSMAIRAVESFNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPKDIEEKFFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLSEDAKAVLNERILRLRENEKRKKEEAELETPWDDIGSAFTEVHNMPVGSDDDDVDLDSMVV 230
BLAST of mRNA_A-nodosum_M_contig821.20.1 vs. uniprot
Match: A0A836CAF1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAF1_9STRA) HSP 1 Score: 149 bits (376), Expect = 2.780e-39 Identity = 89/192 (46.35%), Postives = 113/192 (58.85%), Query Frame = 2
Query: 77 QRIRSSGPLSMAIKAVESYNADFELEEKTATTLDGYLRHPDMIAEVCKQFDCERAEYM-GEIFQPVPYSSATPRGMPTDIEDKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYRIDGMSDAARQAFQERAGRVREN--DRQKKDESELESE---------WDDIGSAFAEVHKMSLGSQDDDLDLDSMVV 616
+R + LSM IKAV Y++ F L E+ L YL+HPDM EVCKQFD AEY+ GEIFQPVPYS TP GMP E +Y ++ Y IAN+PPVVMF AKIFKPSRLCAV+R+ G S AA A +E + N R D+SE + W+ +G + G DDD +LD++V+
Sbjct: 40 RRTAPATALSMGIKAVRDYDSSFTLSEECTALLTAYLQHPDMAKEVCKQFDLTSAEYVDGEIFQPVPYSPNTPHGMPLAFE-RYLNHDDYVIANVPPVVMFKAKIFKPSRLCAVFRVAGRSAAAVAALREAREHAQNNAVPRGAADQSEGSAGAGQSDSGEVWEGLGDVIRASFEEGDGDYDDDDELDALVL 230
BLAST of mRNA_A-nodosum_M_contig821.20.1 vs. uniprot
Match: W7TX51_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TX51_9STRA) HSP 1 Score: 125 bits (314), Expect = 3.550e-30 Identity = 76/198 (38.38%), Postives = 104/198 (52.53%), Query Frame = 2
Query: 89 SSGPLSMAIKAVESYNADFELEEKTATTLDGYLRHPDMIAEVCKQFDCERAEYMGEIFQPVPYSSATPRGMPTDIEDKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYRIDGMS--------DAARQAFQERAGRVRENDRQKKDE-------------SELESEWDDIGSAFAEVHK-MSLGSQDDDLDLDSMVV 616
SS L ++ VE+++ F L ++ L GY+ DM EVCKQ C A + G++FQPVPYS TP GMP + ED + LN Y I N+PP VMF AKIFKP RLCAV+ I+G+ + AR +A ++KD+ S E W+ +G A EV G ++D+ LD+MVV
Sbjct: 40 SSSTLFGGLRGVETFDGAFTLSPESEGVLVGYMECEDMKKEVCKQAKCTSARFTGQLFQPVPYSPGTPLGMPREFED-FHLNPSYAICNVPPTVMFKAKIFKPPRLCAVFTIEGLDPDEEKKILEKARARMDLQAQAAAHQPMEEKDDGSEEKRPVTVLKGSPKEENWNGVGKALHEVALGEKAGEEEDEAALDAMVV 236
BLAST of mRNA_A-nodosum_M_contig821.20.1 vs. uniprot
Match: A0A6U4Q2X6_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4Q2X6_HEMAN) HSP 1 Score: 123 bits (309), Expect = 1.870e-29 Identity = 75/172 (43.60%), Postives = 93/172 (54.07%), Query Frame = 2
Query: 101 LSMAIKAVESYNADFELEEKTATTLDGYLRHPDMIAEVCKQFDCERAEYMGEIFQPVPYSSATPRGMPTDIEDKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYRIDGMSDAARQAFQERAGRVRENDRQKKDESELESEWDDIGSAFAEVHKMSLGSQDDDLDLDSMVV 616
L M IKAVE + F+L ++ L +L M V KQ AE+ G++FQPVPYS TP GMP D E +YFLN Y I N+PP +MF AK FKPSRLCAVY + G+ R+A + V S W +G A A+ +M DDD DLDSMVV
Sbjct: 69 LRMGIKAVEHFEGGFQLSDEVQAALTEHLTSDKMDLTVEKQAHAAAAEFTGKLFQPVPYSVQTPHGMPADFE-QYFLNPDYAIINVPPQIMFEAKCFKPSRLCAVYALKGVDPVHREAILSQKEAVSRRGVAPAP-PRGGSPWAGMGGAMADASRMD--PVDDDADLDSMVV 236
BLAST of mRNA_A-nodosum_M_contig821.20.1 vs. uniprot
Match: A0A8J7F1K5_9CYAN (Uncharacterized protein n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J7F1K5_9CYAN) HSP 1 Score: 113 bits (283), Expect = 3.120e-27 Identity = 53/105 (50.48%), Postives = 75/105 (71.43%), Query Frame = 2
Query: 107 MAIKAVESYNADFELEEKTATTLDGYLRHPDMIAEVCKQFDCERAEYMGEIFQPVPYSSATPRGMPTDIEDKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYR 421
MA+K ++S++++F LE + TL L + + +VC+Q CE+ E+ +FQPVPYSSATP+GMP + E KY +E+Y I N+PP MF AKIFKPSRLCA+Y+
Sbjct: 1 MALKIIQSFDSNFTLEPQAKATLFELLTNESFLKQVCQQSKCEQVEFTELLFQPVPYSSATPKGMPAEFE-KYHESEEYIILNVPPNFMFQAKIFKPSRLCAIYK 104
BLAST of mRNA_A-nodosum_M_contig821.20.1 vs. uniprot
Match: A0A6P1AAG1_9CYAN (Uncharacterized protein n=1 Tax=Kamptonema sp. SIO1D9 TaxID=2607808 RepID=A0A6P1AAG1_9CYAN) HSP 1 Score: 112 bits (281), Expect = 5.900e-27 Identity = 51/105 (48.57%), Postives = 73/105 (69.52%), Query Frame = 2
Query: 107 MAIKAVESYNADFELEEKTATTLDGYLRHPDMIAEVCKQFDCERAEYMGEIFQPVPYSSATPRGMPTDIEDKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYR 421
MA+K VE+++ F L +T TL +L++ I ++C+Q E+ E+ +FQPVPYS +TP+GMP ++E Y+ NE Y I N+PP +MF KIFKPSRLCA+YR
Sbjct: 1 MALKIVENFDGSFTLPSETQETLFTFLKNEKFIQQICQQVKAEKLEFTELLFQPVPYSISTPKGMPAELES-YYNNEDYAIVNVPPNLMFQCKIFKPSRLCAIYR 104
BLAST of mRNA_A-nodosum_M_contig821.20.1 vs. uniprot
Match: A0A252DFV4_9NOSO (Uncharacterized protein n=3 Tax=unclassified Nostoc TaxID=2593658 RepID=A0A252DFV4_9NOSO) HSP 1 Score: 108 bits (271), Expect = 1.600e-25 Identity = 48/106 (45.28%), Postives = 73/106 (68.87%), Query Frame = 2
Query: 107 MAIKAVESYNADFELEEKTATTLDGYLRHPDMIAEVCKQFDCERAEYMGEIFQPVPYSSATPRGMPTDIEDKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYRI 424
M +K V+++++ F LE + L L + + I+++C+Q C++ E+ +FQPVPYS +TP+GMP D E KY +++Y I N+PP MFNAK+ PSRLCA+YRI
Sbjct: 1 MPLKIVQNFDSSFTLEPQAQENLFKLLTNENFISQICQQLQCQKVEFTELLFQPVPYSLSTPKGMPADFE-KYHTSDEYAIINVPPNFMFNAKVVHPSRLCAIYRI 105
BLAST of mRNA_A-nodosum_M_contig821.20.1 vs. uniprot
Match: A0A1Z4SFE9_9NOSO (Uncharacterized protein n=3 Tax=Nostocaceae TaxID=1162 RepID=A0A1Z4SFE9_9NOSO) HSP 1 Score: 108 bits (271), Expect = 1.640e-25 Identity = 52/105 (49.52%), Postives = 72/105 (68.57%), Query Frame = 2
Query: 107 MAIKAVESYNADFELEEKTATTLDGYLRHPDMIAEVCKQFDCERAEYMGEIFQPVPYSSATPRGMPTDIEDKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYR 421
M IK V+S+++ F LE + TL L + ++C+Q CE+ E+ +FQPVPYS ATP+GMPT+ E +Y ++ Y I N+PP MF+AKIFKPSRLCA+YR
Sbjct: 1 MPIKIVQSFDSSFTLEPELQETLFKLLTSESFVNQMCQQLQCEKVEFTKLLFQPVPYSLATPKGMPTEFE-QYHESDDYIIINVPPNFMFSAKIFKPSRLCAIYR 104
BLAST of mRNA_A-nodosum_M_contig821.20.1 vs. uniprot
Match: A0A7S0VGI5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VGI5_9CRYP) HSP 1 Score: 109 bits (273), Expect = 2.190e-25 Identity = 56/117 (47.86%), Postives = 74/117 (63.25%), Query Frame = 2
Query: 101 LSMAIKAVESYNADFELEEKTATTLDGYLRHPDMIAEVCKQFDCERAEYMGEIFQPVPYSSATPRGMPTDIEDKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYRIDGMSDAARQ 451
L M IKAVE++ F+L ++ L G+L M V KQ AE+ G++FQPVPYS TP GMP D E+ YFL+ Y I N+PP +MF AK FKPSRLCAV+ + G++ R+
Sbjct: 4 LRMGIKAVENFEGGFQLSDEVREALTGHLTSDKMELMVEKQAHAADAEFTGKLFQPVPYSVNTPHGMPADCEE-YFLHPDYLIINVPPQIMFEAKCFKPSRLCAVFALKGVAPEQRE 119
BLAST of mRNA_A-nodosum_M_contig821.20.1 vs. uniprot
Match: A0A846H4X5_9CYAN (Uncharacterized protein n=1 Tax=Hassallia byssoidea VB512170 TaxID=1304833 RepID=A0A846H4X5_9CYAN) HSP 1 Score: 108 bits (269), Expect = 3.380e-25 Identity = 50/105 (47.62%), Postives = 70/105 (66.67%), Query Frame = 2
Query: 107 MAIKAVESYNADFELEEKTATTLDGYLRHPDMIAEVCKQFDCERAEYMGEIFQPVPYSSATPRGMPTDIEDKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYR 421
M K ++++++ F LE + +L L + +VC+Q +CE+ E+ +FQPVPYS TP+GMP + E KY N +Y I N+PP MFNAKIFKPSRLCA+YR
Sbjct: 1 MPFKIIQNFDSSFTLEPELQKSLFSLLTSEAFLKQVCQQLNCEKVEFTELLFQPVPYSLTTPKGMPGEFE-KYHDNSEYAIINVPPNFMFNAKIFKPSRLCAIYR 104 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig821.20.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig821.20.1 >prot_A-nodosum_M_contig821.20.1 ID=prot_A-nodosum_M_contig821.20.1|Name=mRNA_A-nodosum_M_contig821.20.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=171bp MAIKAVESYNADFELEEKTATTLDGYLRHPDMIAEVCKQFDCERAEYMGEback to top mRNA from alignment at A-nodosum_M_contig821:202893..206332- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig821.20.1 ID=mRNA_A-nodosum_M_contig821.20.1|Name=mRNA_A-nodosum_M_contig821.20.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3440bp|location=Sequence derived from alignment at A-nodosum_M_contig821:202893..206332- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig821:202893..206332- >mRNA_A-nodosum_M_contig821.20.1 ID=mRNA_A-nodosum_M_contig821.20.1|Name=mRNA_A-nodosum_M_contig821.20.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=513bp|location=Sequence derived from alignment at A-nodosum_M_contig821:202893..206332- (Ascophyllum nodosum dioecious)back to top |