mRNA_A-nodosum_M_contig821.17.3 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig821.17.3 vs. uniprot
Match: D7FUB3_ECTSI (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUB3_ECTSI) HSP 1 Score: 304 bits (778), Expect = 1.050e-97 Identity = 148/193 (76.68%), Postives = 173/193 (89.64%), Query Frame = 2
Query: 302 MAEAAAPETARMETVTLAAGCFWCVEAVYQRVIGVSTVESGYMGGVVDNPSYGQVCTGQTGHAEAIQLEFDPSKVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFYHTQDQKRAAEEVIAAVQPKFPTKIVTEVNAASKWYPADKSHQDFYRRNKASNGYCRRVIHPKLSKVKHAKFKTSDGIMPKLLG 880
MAEA++ A +ET+TL AGCFWCVEAVYQRV+GV +VESGYMGG+V+NPSYGQ+CTG+TGHAE IQL++ PSKVS T+LLEIFFKMHDPTTKNRQGADVGTQYRSAIFYH+++QK+AAEEVIAAVQPKF +KIVTEV AAS ++ ADK HQD+Y RNK+SNGYCR VIHPKLSKVKH K+K S G+M K+LG
Sbjct: 1 MAEASST-AAGLETITLGAGCFWCVEAVYQRVVGVESVESGYMGGIVNNPSYGQICTGETGHAEVIQLKYKPSKVSPTDLLEIFFKMHDPTTKNRQGADVGTQYRSAIFYHSEEQKQAAEEVIAAVQPKFGSKIVTEVTAASDFFVADKGHQDYYSRNKSSNGYCRLVIHPKLSKVKHDKYK-SPGVMSKVLG 191
BLAST of mRNA_A-nodosum_M_contig821.17.3 vs. uniprot
Match: A0A840V7S4_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Haloferula luteola TaxID=595692 RepID=A0A840V7S4_9BACT) HSP 1 Score: 216 bits (550), Expect = 1.420e-63 Identity = 102/171 (59.65%), Postives = 129/171 (75.44%), Query Frame = 2
Query: 320 PETARMETVTLAAGCFWCVEAVYQRVIGVSTVESGYMGGVVDNPSYGQVCTGQTGHAEAIQLEFDPSKVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFYHTQDQKRAAEEVIAAVQPKFPTKIVTEVNAASKWYPADKSHQDFYRRNKASNGYCRRVIHPKLSKVK 832
PE A E +TL AGCFWCVEAV+ ++ GV + SGYMGG ++P+Y QVCTG+TGHAE +Q+ FDP+K SA +L+ F+++HDPTT NRQGADVGTQYRSAIFYH+++QK+ AE A Q +F IVTE+ AS +YPA+ HQDFY +NK N YCR VI PKL K+K
Sbjct: 33 PENA--EVITLGAGCFWCVEAVFAQIEGVQSATSGYMGGTTESPTYQQVCTGETGHAEVVQIVFDPAKTSAARILDWFWELHDPTTLNRQGADVGTQYRSAIFYHSEEQKKVAEASKEAAQKEFTDPIVTEITPASTFYPAENYHQDFYFQNKTKNPYCRAVIEPKLRKLK 201
BLAST of mRNA_A-nodosum_M_contig821.17.3 vs. uniprot
Match: UPI001B8B6857 (Peptide-methionine (S)-S-oxide reductase MsrA n=2 Tax=Luteolibacter ambystomatis TaxID=2824561 RepID=UPI001B8B6857) HSP 1 Score: 208 bits (529), Expect = 2.080e-60 Identity = 100/165 (60.61%), Postives = 122/165 (73.94%), Query Frame = 2
Query: 338 ETVTLAAGCFWCVEAVYQRVIGVSTVESGYMGGVVDNPSYGQVCTGQTGHAEAIQLEFDPSKVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFYHTQDQKRAAEEVIAAVQPKFPTKIVTEVNAASKWYPADKSHQDFYRRNKASNGYCRRVIHPKLSKVK 832
E VTL AGCFWCVEAV++++ GV++V SGYMGG V NP+Y QVC TGHAE +Q+ +DP KVS ++L+ F+K+HDPTT NRQG DVGTQYRSAIFYHT QK AAE A Q F IVTE+ A ++PA+ HQD+Y +NK NGYCR VI PKL K+K
Sbjct: 42 EVVTLGAGCFWCVEAVFKQIDGVASVTSGYMGGKVKNPTYQQVCEENTGHAEVVQIVYDPKKVSLEKILDWFWKLHDPTTLNRQGNDVGTQYRSAIFYHTDAQKTAAEAAKKAAQKDFTDPIVTEITKAGDFWPAENYHQDYYFQNKNKNGYCRVVIEPKLKKLK 206
BLAST of mRNA_A-nodosum_M_contig821.17.3 vs. uniprot
Match: A0A3D4H9R9_9BACT (Peptide methionine sulfoxide reductase MsrA n=2 Tax=Opitutae TaxID=414999 RepID=A0A3D4H9R9_9BACT) HSP 1 Score: 206 bits (525), Expect = 3.370e-60 Identity = 105/176 (59.66%), Postives = 129/176 (73.30%), Query Frame = 2
Query: 308 EAAAPETARMETVTLAAGCFWCVEAVYQRVIGVSTVESGYMGGVVDNPSYGQVCTGQTGHAEAIQLEFDPSKVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFYHTQDQKRAAEEVIA--AVQPKFPTKIVTEVNAASKWYPADKSHQDFYRRNKASNGYCRRVIHPKLSKV 829
E+ + ++ME++ L AGCFWC EAV QRV GV + SGYMGG V NP+Y QV TG+TGHAE ++ FDPS S ELLEIF+ MHDPTT NRQGADVGTQYRSAIFY++++QKR AE IA A +P IVTEV A +YPA++ HQ++Y NK + GYCR VIHPKL K+
Sbjct: 4 ESLGADKSKMESIILGAGCFWCTEAVMQRVEGVESAVSGYMGGHVKNPTYRQVVTGETGHAEVAKITFDPSVTSLEELLEIFWLMHDPTTLNRQGADVGTQYRSAIFYNSEEQKRIAEASIAKLAATKTYPDPIVTEVTAIEPFYPAEEYHQEYYELNKNA-GYCRYVIHPKLKKL 178
BLAST of mRNA_A-nodosum_M_contig821.17.3 vs. uniprot
Match: A0A1M6J340_9BACT (Peptide methionine sulfoxide reductase MsrA n=2 Tax=Rubritalea squalenifaciens TaxID=407226 RepID=A0A1M6J340_9BACT) HSP 1 Score: 207 bits (528), Expect = 3.890e-60 Identity = 96/165 (58.18%), Postives = 121/165 (73.33%), Query Frame = 2
Query: 338 ETVTLAAGCFWCVEAVYQRVIGVSTVESGYMGGVVDNPSYGQVCTGQTGHAEAIQLEFDPSKVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFYHTQDQKRAAEEVIAAVQPKFPTKIVTEVNAASKWYPADKSHQDFYRRNKASNGYCRRVIHPKLSKVK 832
E +TL AGCFWCVEAVY R+ GV + SGYMGG NP+Y ++CTG TGHAE + + +DP K+S E+L F+++HDPTT NRQG DVGTQYRSAI+Y++ QK AE+ + Q F KIVTE+ AS+ YPA+ HQD+YR NK SNGYCR VI PK+ K+K
Sbjct: 45 EQITLGAGCFWCVEAVYNRIDGVKSAVSGYMGGKTKNPTYEEICTGSTGHAEVVHVTYDPKKISTEEILAWFWQLHDPTTLNRQGNDVGTQYRSAIYYYSDKQKDVAEKSLKEAQKNFKDKIVTEITKASELYPAEVYHQDYYRLNKNSNGYCRLVIAPKMKKLK 209
BLAST of mRNA_A-nodosum_M_contig821.17.3 vs. uniprot
Match: A0A841I2R3_9DEIO (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Deinobacterium chartae TaxID=521158 RepID=A0A841I2R3_9DEIO) HSP 1 Score: 206 bits (523), Expect = 6.430e-60 Identity = 101/172 (58.72%), Postives = 131/172 (76.16%), Query Frame = 2
Query: 323 ETARMETVTLAAGCFWCVEAVYQRVIGVSTVESGYMGGVVDNPSYGQVCTGQTGHAEAIQLEFDPSKVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFYHTQDQKRAAEEVIAAV--QPKFPTKIVTEVNAASKWYPADKSHQDFYRRNKASNGYCRRVIHPKLSKVK 832
E +R E TLA GCFWC+EAVY + GV+ V SGYMGG V NP Y QVCTG TGHAE +Q+ F+P +VS +LLE+FF +HDPTT NRQGADVGTQYRSA+FYH+++Q+R AEEVIA + Q +P IVTE++ AS +YPA++ HQ+++ RN A YC+ VI PK++K +
Sbjct: 2 EPSRFEVATLAGGCFWCLEAVYDDLRGVTDVVSGYMGGHVANPDYRQVCTGDTGHAEVVQITFEPEQVSFRQLLEVFFTIHDPTTLNRQGADVGTQYRSAVFYHSEEQRRTAEEVIAELGAQGVWPAPIVTELSPASTFYPAEEYHQEYFARNPAQP-YCQVVIAPKVAKFR 172
BLAST of mRNA_A-nodosum_M_contig821.17.3 vs. uniprot
Match: A0A858RLV7_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Luteolibacter luteus TaxID=2728835 RepID=A0A858RLV7_9BACT) HSP 1 Score: 206 bits (525), Expect = 8.330e-60 Identity = 100/176 (56.82%), Postives = 123/176 (69.89%), Query Frame = 2
Query: 305 AEAAAPETARMETVTLAAGCFWCVEAVYQRVIGVSTVESGYMGGVVDNPSYGQVCTGQTGHAEAIQLEFDPSKVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFYHTQDQKRAAEEVIAAVQPKFPTKIVTEVNAASKWYPADKSHQDFYRRNKASNGYCRRVIHPKLSKVK 832
A PE A E +TL AGCFWC+EA Y++V GV + SGYMGG NP+Y QVC G TGHAE +Q+ +DP K++ ++LE F+++HDPTT NRQGADVGTQYRSAI+YH QK AAE QP F IVTE+ A +YPA+ HQD+Y +NK NGYCR VI PKL K+K
Sbjct: 34 ATPKVPEGA--EVITLGAGCFWCIEAAYKQVPGVLSATSGYMGGTTANPTYEQVCEGTTGHAEVVQVVYDPKKITTEKVLEWFWELHDPTTLNRQGADVGTQYRSAIYYHNDAQKTAAEASKKEFQPHFKDPIVTEITKAGTFYPAENYHQDYYFQNKTKNGYCRVVIEPKLKKLK 207
BLAST of mRNA_A-nodosum_M_contig821.17.3 vs. uniprot
Match: A0A3M1HQ38_9CHLR (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1HQ38_9CHLR) HSP 1 Score: 205 bits (522), Expect = 9.950e-60 Identity = 102/169 (60.36%), Postives = 128/169 (75.74%), Query Frame = 2
Query: 338 ETVTLAAGCFWCVEAVYQRVIGVSTVESGYMGGVVDNPSYGQVCTGQTGHAEAIQLEFDPSKVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFYHTQDQKRAAEEVIAAVQPK--FPTKIVTEVNAASKWYPADKSHQDFYRRNKASNGYCRRVIHPKLSKVKHA 838
ET TLA GCFWC+EAVYQ+V GV V GY GG V NP+Y +VC+G+TGHAEA+Q+ FDP VS +LL IFF +HDPTT NRQGADVGTQYRSAIFYH ++Q+RAAE +IA ++ + +P IVTEV A +YPA+ H+D++RRN GYCR VI PKL+K + +
Sbjct: 4 ETATLAGGCFWCLEAVYQQVRGVDRVVPGYCGGRVPNPTYKEVCSGRTGHAEAVQITFDPEIVSFRDLLSIFFAIHDPTTLNRQGADVGTQYRSAIFYHDEEQRRAAEAMIAELEARQIWPQPIVTEVTRAGAFYPAEDYHRDYFRRN-PYQGYCRVVIAPKLAKFRQS 171
BLAST of mRNA_A-nodosum_M_contig821.17.3 vs. uniprot
Match: A0A7W1UKI3_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7W1UKI3_9BACT) HSP 1 Score: 203 bits (517), Expect = 5.080e-59 Identity = 102/167 (61.08%), Postives = 126/167 (75.45%), Query Frame = 2
Query: 338 ETVTLAAGCFWCVEAVYQRVIGVSTVESGYMGGVVDNPSYGQVCTGQTGHAEAIQLEFDPSKVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFYHTQDQKRAAEEVIAAVQPK--FPTKIVTEVNAASKWYPADKSHQDFYRRNKASNGYCRRVIHPKLSKVK 832
E TL AGCFWCVEAV+ + GV TVESGY GG V NPSY QVCTG+TGHAE IQ+ FDP VS E+LE+FF +HDPTT NRQGADVGTQYRSAIFYH+ +QK AE+VIA + + IVTEV+ S+++PA + H+D+YRRN + GYC+ VI PK++K +
Sbjct: 8 EVATLGAGCFWCVEAVFDELRGVETVESGYSGGQVPNPSYEQVCTGRTGHAEVIQITFDPEVVSFREVLEVFFTVHDPTTLNRQGADVGTQYRSAIFYHSPEQKATAEQVIAEMNQAGIWNDPIVTEVSEFSEFFPAGEYHRDYYRRN-PNQGYCQIVIAPKVAKFR 173
BLAST of mRNA_A-nodosum_M_contig821.17.3 vs. uniprot
Match: A0A2A2Y5N2_9BACT (Peptide methionine sulfoxide reductase MsrA n=3 Tax=Verrucomicrobiae TaxID=203494 RepID=A0A2A2Y5N2_9BACT) HSP 1 Score: 204 bits (519), Expect = 5.770e-59 Identity = 93/165 (56.36%), Postives = 123/165 (74.55%), Query Frame = 2
Query: 338 ETVTLAAGCFWCVEAVYQRVIGVSTVESGYMGGVVDNPSYGQVCTGQTGHAEAIQLEFDPSKVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFYHTQDQKRAAEEVIAAVQPKFPTKIVTEVNAASKWYPADKSHQDFYRRNKASNGYCRRVIHPKLSKVK 832
E +TL AGCFWC+EA Y+++ GV + SGYMGG + NP+Y Q+C G TGHAE +Q+ +DP K S ++L F+++HDPTT NRQGADVGTQYRSAIFYH + QK+ AE A + F + IVTE+ ++ +YPA+K HQDFY++NK+ N YCR VI PKL K+K
Sbjct: 40 EVLTLGAGCFWCIEAAYRQLDGVYSATSGYMGGTLANPTYEQICNGTTGHAEVVQVVYDPKKTSTEKVLSWFWELHDPTTLNRQGADVGTQYRSAIFYHNEGQKKVAEASKTAAKELFKSPIVTEITESATFYPAEKYHQDFYQQNKSKNPYCRAVITPKLKKLK 204 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig821.17.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig821.17.3 >prot_A-nodosum_M_contig821.17.3 ID=prot_A-nodosum_M_contig821.17.3|Name=mRNA_A-nodosum_M_contig821.17.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=195bp MAEAAAPETARMETVTLAAGCFWCVEAVYQRVIGVSTVESGYMGGVVDNPback to top mRNA from alignment at A-nodosum_M_contig821:186035..192110- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig821.17.3 ID=mRNA_A-nodosum_M_contig821.17.3|Name=mRNA_A-nodosum_M_contig821.17.3|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6076bp|location=Sequence derived from alignment at A-nodosum_M_contig821:186035..192110- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig821:186035..192110- >mRNA_A-nodosum_M_contig821.17.3 ID=mRNA_A-nodosum_M_contig821.17.3|Name=mRNA_A-nodosum_M_contig821.17.3|organism=Ascophyllum nodosum dioecious|type=CDS|length=585bp|location=Sequence derived from alignment at A-nodosum_M_contig821:186035..192110- (Ascophyllum nodosum dioecious)back to top |