mRNA_A-nodosum_M_contig820.3.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig820.3.2 vs. uniprot
Match: D8LBR6_ECTSI (Rab-GAP TBC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBR6_ECTSI) HSP 1 Score: 637 bits (1642), Expect = 1.170e-214 Identity = 388/632 (61.39%), Postives = 422/632 (66.77%), Query Frame = 1
Query: 1 MEGSLSSANKAEPSS-GTASNLDSFFKRLGQGQGSRLWTGPGRASRAVPGSLRT-HFQPR--SDDVTNTPASTVASGSAAGHSKAGRIPSGSDRRPGALAAPVNNNETAHSVGFGTDDGLLSPLGTSRGWKELEGGVSIGRTGPPGHRGVMSSSFASGSGGGSEIGGRHGSSGSNGDALAGDNTLISAPVSSSPAPPPSTNSVQPPKPTGAGAV-TGAATPRKPAXXXXXXXXXXX--------AISTTPS---PVLANRPSYRDKRFAEVLGEDIVKLDELRKLSWNGVPQVHRAAVWQLLVGYMPANRSRRAVAMERKRREYREAVPQYFDVPDAARSHQEQNILRQILVDVPRTCPDVPFFHQDKVQRAMERILYIWAIRHPASGYVQGINDIMTPLYVVFLSAHVGPAVESKDVGKVEEVLLDEVEADVYWCLTKLLDNIQ----------------------------------------------DHYTAMQPGLQRMVLRLEELVQRIDADLHRHITEQGLMYIQFAFRWMNCLLMRELPLRAVVRAWDTYLTEENGFESFHVYVSAALLCHFSSTLREMDFQTMVMFLQDMPTKEWGEEQVEPLLSQAYILSMLFEGSPNHLGA 1710
MEGS K SS G+ SNLDSFFKRLGQGQ SRLW GPGR S AVPGSLRT QPR S D++ A+ N+ +G D LSP GT +GW EL G G TG G S+ + G PP+ + P + A A+ G+A+ ++ + XXXXXXXXXX A + P+ P LA RPSYRDKRF +VLGE++V+LDELRKLSWNGVP VHRAAVWQLLVGYMPANR+RR A+ERKRREY EAVPQYFDVPDAARS QEQNILRQILVDVPRTCPDVPFFHQDKVQRAMERILYIWAIRHPASGYVQGIND++TPLYVVFLSAHVGP+VESKDV KV+E LLDEVEADVYWCLTKLLDNIQ DHYTAMQPGLQRMVLRLEELVQRIDADLHRHIT++GLMYIQFAFRWMNCLLMRELP RAVVRAWDTYL+EENGFESFHVYVSAALLCHFS TLREMDFQTMVMFLQDMPTKEWGEE+VEPLLSQAYILS LFEGSPNHLGA
Sbjct: 1 MEGSPPEPQKPLASSPGSVSNLDSFFKRLGQGQSSRLWAGPGR-SGAVPGSLRTSRLQPRNNSGDISRPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAENDRGRRIGTAED---LSPFGTRQGWSELTGSGG-GGTGGVNRPGGGGSAXXTPFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRPPNATTGSPQTLSAATAIGAGSASTKQQSKXXXXXXXXXXXXXXXXXXAAAQAPAAAAPALATRPSYRDKRFEDVLGEEVVELDELRKLSWNGVPPVHRAAVWQLLVGYMPANRARREAALERKRREYWEAVPQYFDVPDAARSLQEQNILRQILVDVPRTCPDVPFFHQDKVQRAMERILYIWAIRHPASGYVQGINDLLTPLYVVFLSAHVGPSVESKDVSKVDEALLDEVEADVYWCLTKLLDNIQSLTGLVFVRRPPGLPDFYPGFMFLCRSLLLCTAVGVGCGGNRERSQDHYTAMQPGLQRMVLRLEELVQRIDADLHRHITDEGLMYIQFAFRWMNCLLMRELPQRAVVRAWDTYLSEENGFESFHVYVSAALLCHFSGTLREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSTLFEGSPNHLGA 627
BLAST of mRNA_A-nodosum_M_contig820.3.2 vs. uniprot
Match: A0A836C8P8_9STRA (Rab-GTPase-TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8P8_9STRA) HSP 1 Score: 444 bits (1143), Expect = 8.650e-144 Identity = 222/338 (65.68%), Postives = 257/338 (76.04%), Query Frame = 1
Query: 721 LANRPSYRDKRFAEVLGEDIVKLDELRKLSWNGVPQVHRAAVWQLLVGYMPANRSRRAVAMERKRREYREAVPQYFDVP-DAARSHQEQNILRQILVDVPRTCPDVPFFHQ-DKVQRAMERILYIWAIRHPASGYVQGINDIMTPLYVVFLSAHV-------GPAVESKDVGKVEEVLLDEVEADVYWCLTKLLDNIQDHYTAMQPGLQRMVLRLEELVQRIDADLHRHITEQGLMYIQFAFRWMNCLLMRELPLRAVVRAWDTYLTEENG-FESFHVYVSAALLCHFSSTLREMDFQTMVMFLQDMPTKEWGEEQVEPLLSQAYILSMLFEGSPNHL 1704
L +RPS+RD +++E+LG D+V L +LR+L+WNGVP +R VW+LL GYMPANR RRA A+ RKRREY EAV +F DAARS QEQ +LRQILVD+PRT PD P F + VQR+M R LY+WA RHPASGYVQGIND++TP YVVFL HV + E L E+EAD YWCLTKLLDNIQDHYTAMQPGLQRMVLRLEELV+RID DLH H+ +G+ +IQFAFRWMNCLLMRELPL A+VRAWDTYL+EE+G FESFHVYV AALLC FS L +DF +V+FLQDMPT+ W E VEPLLSQAYILS LFE S HL
Sbjct: 44 LQSRPSFRDSKYSEILGADVVSLPDLRRLAWNGVPPAYRPTVWKLLCGYMPANRDRRAAALARKRREYAEAVAAHFAAAADAARSAQEQALLRQILVDIPRTAPDAPLFAEVAAVQRSMTRALYVWAQRHPASGYVQGINDLLTPFYVVFLGEHVVGGEGXXXXXXXXXXXXXLPEEALKEIEADAYWCLTKLLDNIQDHYTAMQPGLQRMVLRLEELVRRIDLDLHAHLAAEGVQFIQFAFRWMNCLLMRELPLPAIVRAWDTYLSEEDGGFESFHVYVCAALLCKFSPALLRLDFAALVLFLQDMPTRAWSEADVEPLLSQAYILSTLFENSSAHL 381
BLAST of mRNA_A-nodosum_M_contig820.3.2 vs. uniprot
Match: A0A7S1U894_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U894_9STRA) HSP 1 Score: 434 bits (1117), Expect = 1.520e-140 Identity = 201/327 (61.47%), Postives = 252/327 (77.06%), Query Frame = 1
Query: 730 RPSYRDKRFAEVLGEDIVKLDELRKLSWNGVPQVHRAAVWQLLVGYMPANRSRRAVAMERKRREYREAVPQYFDVPDAARSHQEQNILRQILVDVPRTCPDVPFFHQDKVQRAMERILYIWAIRHPASGYVQGINDIMTPLYVVFLSAHVGPAVESKDVGKVEEVLLDEVEADVYWCLTKLLDNIQDHYTAMQPGLQRMVLRLEELVQRIDADLHRHITEQGLMYIQFAFRWMNCLLMRELPLRAVVRAWDTYLTEENGFESFHVYVSAALLCHFSSTLREMDFQTMVMFLQDMPTKEWGEEQVEPLLSQAYILSMLFEGSPNHLGA 1710
R SY+D +FAE+L ++V L+ L+ L+WNGVP HR+ VW+L++GY+P+N SRR ++RKRREY E+VPQYFD+PD R+ QEQ++LRQ+LVDVPRT P VP FH +++ R MERILYIWAIRHPASGYVQGIN ++TP ++VFLS +G DVG+V+ +LDEVEAD YWC+TKLLD I DHYT PGL RM LE LV+RID L H ++ L +QFAFRWMNCLLMREL + A++R WDTYL+E++GFE+FH YV A LLCHFS LR M FQ +V+FLQD+PTKEWGE QVEPLLSQA+ILS F + HL +
Sbjct: 18 RMSYKDAQFAELLQAEVVDLERLKSLAWNGVPLGHRSMVWKLILGYLPSNASRRPGTLKRKRREYAESVPQYFDIPDQQRTSQEQDLLRQVLVDVPRTAPGVPLFHNERIHRCMERILYIWAIRHPASGYVQGINGLLTPFFLVFLSGLIGENAAYCDVGRVDAAVLDEVEADTYWCITKLLDAILDHYTEGTPGLTRMCRNLEHLVRRIDRPLAEHFDDEQLSTVQFAFRWMNCLLMRELNVNAIIRMWDTYLSEKDGFEAFHTYVCATLLCHFSEDLRGMKFQELVLFLQDLPTKEWGEAQVEPLLSQAFILSQAFTDAQKHLAS 344
BLAST of mRNA_A-nodosum_M_contig820.3.2 vs. uniprot
Match: A0A7S2S4T0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4T0_9STRA) HSP 1 Score: 406 bits (1044), Expect = 1.810e-127 Identity = 199/344 (57.85%), Postives = 259/344 (75.29%), Query Frame = 1
Query: 694 AISTTPSPVLANRPSYRDKRFAEVLGE-DIVKLDELRKLSWNGVPQVHRAAVWQLLVGYMPANRSRRAVAMERKRREYREAVPQYFDVPDAARSHQEQNILRQILVDVPRTCPDVPFFHQDKVQRAMERILYIWAIRHPASGYVQGINDIMTPLYVVFLSAHV---GPAVESKDVGKVEEVLLDEVEADVYWCLTKLLDNIQDHYTAMQPGLQRMVLRLEELVQRIDADLHRHITEQGLMYIQFAFRWMNCLLMRELPLRAVVRAWDTYLTEEN---GFESFHVYVSAALLCHFSSTLREMDFQTMVMFLQDMPTKEWGEEQVEPLLSQAYILSMLFEGSPNHL 1704
A + T +PV +YR++RF E+L + ++V L+EL+KLSW+GVP R VWQLL+ Y+P++R RR + RKR+EY +AVP +FDVP A+R+ QEQ +LRQILVDVPRT PDVP FHQ +QR MER+LYIW+IRHPASGYVQG+ND+ TPL+VVFLSA V +VE+ D ++ + L VEAD YWCLTKLLDNIQDHYTA QPGLQR + RLEEL +RID+DLH H+ +G+++ FAFRWMN LLMRELPL+A++R WDT +E+ GFE FHV+V AA L FSS ++ + + ++ FLQ PT+EWG +VE LLS+A+ILS L+ SP+HL
Sbjct: 153 AAAATAAPV-----TYRERRFRELLFDSEVVNLEELKKLSWSGVPSKWRPMVWQLLLAYLPSDRKRREATLTRKRKEYADAVPAFFDVPSASRTMQEQKMLRQILVDVPRTSPDVPLFHQAVIQRCMERLLYIWSIRHPASGYVQGMNDLATPLFVVFLSAAVERSSASVEAMDAARLSKEALTNVEADTYWCLTKLLDNIQDHYTAGQPGLQRQIFRLEELTRRIDSDLHLHLQNEGIVFSFFAFRWMNNLLMRELPLQAIIRLWDTLFSEDESGCGFEDFHVFVCAAFLKSFSSKIQTLAGEELMCFLQAFPTREWGGTEVETLLSEAFILSTLYRNSPSHL 491
BLAST of mRNA_A-nodosum_M_contig820.3.2 vs. uniprot
Match: A0A024G9G9_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G9G9_9STRA) HSP 1 Score: 399 bits (1026), Expect = 3.030e-125 Identity = 187/324 (57.72%), Postives = 246/324 (75.93%), Query Frame = 1
Query: 736 SYRDKRFAEVLGEDIVKLDELRKLSWNGVPQVHRAAVWQLLVGYMPANRSRRAVAMERKRREYREAVPQYFDVPDAARSHQEQNILRQILVDVPRTCPDVPFFHQDKVQRAMERILYIWAIRHPASGYVQGINDIMTPLYVVFLSAHVGPAVESKDVGKVEEVLLDEVEADVYWCLTKLLDNIQDHYTAMQPGLQRMVLRLEELVQRIDADLHRHITE-QGLMYIQFAFRWMNCLLMRELPLRAVVRAWDTYLTEENGFESFHVYVSAALLCHFSSTLREMDFQTMVMFLQDMPTKEWGEEQVEPLLSQAYILSMLFEGSPNHL 1704
S R ++ +++ D++ LD+LR+LSW G+PQ R+ W+LL+GYMP + RR ++RKR+EY + + QY+ +PD R +EQN LRQILVD+PRT DVP F +++ +MERILYIWAIRHPASGYVQGIND++TP VVFL+ V + + + E L +VEAD YWCLTKLLD IQDHYT QPGLQRMV R+E+LV R D+DL++HI E + + ++QFAFRWMNCLLMRE+PL+A+VR WDTYL E+NGFESFHVYV AA+L F L+EM+FQ +V+FLQ +PTK+W EEQ++PLLS+A+IL F +PNHL
Sbjct: 149 SLRAEQLSQLFENDVIDLDKLRELSWGGIPQEFRSNAWKLLLGYMPTKKDRREGMIQRKRQEYIDLLRQYYFIPDTDRGLKEQNTLRQILVDIPRTNADVPLFKNERIHHSMERILYIWAIRHPASGYVQGINDLLTPFLVVFLTPFVDKPLYAA-LDDFPEKSLQQVEADSYWCLTKLLDGIQDHYTFAQPGLQRMVQRMEDLVNRCDSDLYKHIVEKEAVQFVQFAFRWMNCLLMREIPLQAIVRVWDTYLCEDNGFESFHVYVCAAILMTFGEKLKEMEFQELVLFLQSLPTKDWTEEQIDPLLSRAFILQTYFADAPNHL 471
BLAST of mRNA_A-nodosum_M_contig820.3.2 vs. uniprot
Match: A0A5D6Y7I2_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7I2_9STRA) HSP 1 Score: 399 bits (1025), Expect = 5.690e-125 Identity = 187/324 (57.72%), Postives = 246/324 (75.93%), Query Frame = 1
Query: 736 SYRDKRFAEVLGEDIVKLDELRKLSWNGVPQVHRAAVWQLLVGYMPANRSRRAVAMERKRREYREAVPQYFDVPDAARSHQEQNILRQILVDVPRTCPDVPFFHQDKVQRAMERILYIWAIRHPASGYVQGINDIMTPLYVVFLSAHVGPAVESKDVGKVEEVLLDEVEADVYWCLTKLLDNIQDHYTAMQPGLQRMVLRLEELVQRIDADLHRHITE-QGLMYIQFAFRWMNCLLMRELPLRAVVRAWDTYLTEENGFESFHVYVSAALLCHFSSTLREMDFQTMVMFLQDMPTKEWGEEQVEPLLSQAYILSMLFEGSPNHL 1704
++R ++F +L D+V LD+LR+LSW GVP HR A W+LL+GYMP+ RR ++RKR+EY + QY+ +PD R +EQ LRQILVD+PRT DV F ++++ + MER+LY WAIRHPASGYVQGIND++TP VVFLSA+V ++ ++ +V + L VEAD YWCLTKLLD IQDHYT QPGLQRMV R+EELV R D+DL +HI E +G+ ++QFAFRWMNCLLMRE+PL A+VR WDTYL E+NGFESFHVYV AA+L F L+ ++FQ +V+FLQ +PTK+W E++++PLLS+A+IL F SP+HL
Sbjct: 158 NHRSEQFRAMLQSDVVDLDKLRELSWGGVPVHHRPAAWRLLLGYMPSKLDRREPMLQRKRQEYGNLLQQYYYIPDTDRGDKEQTTLRQILVDIPRTNADVKLFKEERIHQLMERVLYTWAIRHPASGYVQGINDLLTPFLVVFLSAYVDEP-QTCELAEVSDEALQTVEADSYWCLTKLLDGIQDHYTFAQPGLQRMVQRMEELVHRCDSDLFKHIVEREGVQFVQFAFRWMNCLLMREVPLDAIVRLWDTYLCEDNGFESFHVYVCAAILMTFGEQLKALEFQDLVVFLQHLPTKDWAEDEIDPLLSRAFILQTYFADSPSHL 480
BLAST of mRNA_A-nodosum_M_contig820.3.2 vs. uniprot
Match: A0A3F2RUN4_9STRA (Rab-GAP TBC domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RUN4_9STRA) HSP 1 Score: 400 bits (1027), Expect = 7.330e-125 Identity = 195/340 (57.35%), Postives = 252/340 (74.12%), Query Frame = 1
Query: 694 AISTTPSPVLANRPS--YRDKRFAEVLGEDIVKLDELRKLSWNGVPQVHRAAVWQLLVGYMPANRSRRAVAMERKRREYREAVPQYFDVPDAARSHQEQNILRQILVDVPRTCPDVPFFHQDKVQRAMERILYIWAIRHPASGYVQGINDIMTPLYVVFLSAHVGPAVESKDVGKVEEVLLDEVEADVYWCLTKLLDNIQDHYTAMQPGLQRMVLRLEELVQRIDADLHRHITE-QGLMYIQFAFRWMNCLLMRELPLRAVVRAWDTYLTEENGFESFHVYVSAALLCHFSSTLREMDFQTMVMFLQDMPTKEWGEEQVEPLLSQAYILSMLFEGSPNHL 1704
A++T P+ + S R +F +L +++V LD+LRKLSW GVP +R VW+LL+GYMP+ + RRA +ERKR+EY E + QY+ +PD R +EQ LRQILVD+PRT DV F +++ + MER+LYIW+IRHPASGYVQGIND+MTP VVFLSA V ++ D+ V + L VEAD YWCLTKLLD+IQDHYT QPGLQRMV R+EELV R DADL +HI E + + ++QFAFRWMNCLLMRELPL +VR WDTYL E++GFESFHVYV AA+L F TL+ ++FQ +V+FLQ +PTK+W E ++EPLLS+A+IL F +P+HL
Sbjct: 171 AVTTAPAANSSRNASGHLRFAQFERLLKKEVVDLDQLRKLSWGGVPTNYRPTVWRLLLGYMPSKQDRRAAMLERKRQEYVELLQQYYYIPDTDRGTREQTTLRQILVDIPRTNADVKLFQNERIHQCMERVLYIWSIRHPASGYVQGINDLMTPFLVVFLSAFVEEP-QTCDLSGVSDENLQIVEADSYWCLTKLLDDIQDHYTFAQPGLQRMVQRMEELVHRCDADLFQHIVERENVQFVQFAFRWMNCLLMRELPLDGIVRIWDTYLCEDSGFESFHVYVCAAILMTFGETLKTLEFQDLVLFLQSLPTKDWVENEIEPLLSRAFILQTYFADAPSHL 509
BLAST of mRNA_A-nodosum_M_contig820.3.2 vs. uniprot
Match: F0WSS9_9STRA (Uncharacterized protein AlNc14C238G9425 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WSS9_9STRA) HSP 1 Score: 399 bits (1024), Expect = 1.170e-124 Identity = 188/339 (55.46%), Postives = 247/339 (72.86%), Query Frame = 1
Query: 742 RDKRFAEVLGEDIVKLDELRKLSWNGVPQVHRAAVWQLLVGYMPANRSRRAVAMERKRREYREAVPQYFDVPDAARSHQEQNILRQILVDVPRTCPDVPFFHQDKVQRAMERILYIWAIRHPASGYVQGINDIMTPLYVVFLSAHVGPAVESKDVG-----------------KVEEVLLDEVEADVYWCLTKLLDNIQDHYTAMQPGLQRMVLRLEELVQRIDADLHRHITE-QGLMYIQFAFRWMNCLLMRELPLRAVVRAWDTYLTEENGFESFHVYVSAALLCHFSSTLREMDFQTMVMFLQDMPTKEWGEEQVEPLLSQAYILSMLFEGSPNHL 1704
R ++ +++ D++ LD+LR+LSW G+PQ +R+ W+LL+GYMP + RR +ERKR+EY + + QY+ +PD R +EQN LRQILVD+PRT DVP F +++ ++MERILYIWAIRHPASGYVQGIND++TP VVFL+ VG + + + E L +VEAD YWCLTKLLD IQDHYT QPGLQRMV R+E+LV R D++L+RHI E + + ++QFAFRWMNCLLMRE+PL A+VR WDTYL E+NGFESFHVYV AA+L F L+EM+FQ +V+FLQ +PTK+W EEQ++PLLS+A+IL F +PNHL
Sbjct: 154 RAEQLSQLFENDVIDLDKLRELSWGGIPQEYRSNAWKLLLGYMPTKKDRREAMIERKRQEYIDLLRQYYYIPDTDRGLKEQNTLRQILVDIPRTNADVPLFKNERIHQSMERILYIWAIRHPASGYVQGINDLLTPFLVVFLTTFVGKFIFISSIAITLTPTRTDKPLYAALDEFPEKSLQQVEADSYWCLTKLLDGIQDHYTFAQPGLQRMVQRMEDLVNRCDSNLYRHIVEKEAVQFVQFAFRWMNCLLMREIPLEAIVRVWDTYLCEDNGFESFHVYVCAAILMTFGEQLKEMEFQELVLFLQSLPTKDWTEEQIDPLLSRAFILQTYFADAPNHL 492
BLAST of mRNA_A-nodosum_M_contig820.3.2 vs. uniprot
Match: K3W8M6_GLOUD (Rab-GAP TBC domain-containing protein n=2 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W8M6_GLOUD) HSP 1 Score: 398 bits (1022), Expect = 1.570e-124 Identity = 184/324 (56.79%), Postives = 246/324 (75.93%), Query Frame = 1
Query: 736 SYRDKRFAEVLGEDIVKLDELRKLSWNGVPQVHRAAVWQLLVGYMPANRSRRAVAMERKRREYREAVPQYFDVPDAARSHQEQNILRQILVDVPRTCPDVPFFHQDKVQRAMERILYIWAIRHPASGYVQGINDIMTPLYVVFLSAHVGPAVESKDVGKVEEVLLDEVEADVYWCLTKLLDNIQDHYTAMQPGLQRMVLRLEELVQRIDADLHRHITE-QGLMYIQFAFRWMNCLLMRELPLRAVVRAWDTYLTEENGFESFHVYVSAALLCHFSSTLREMDFQTMVMFLQDMPTKEWGEEQVEPLLSQAYILSMLFEGSPNHL 1704
++R ++F ++L D+V LD++R+LSW G+P HR W+LL+GYMP+ + RR ++RKR+EY E + QY+ +PD R +EQ LRQILVD+PRT DV F ++++ + MER+LY WAIRHPASGYVQGIND++TP VVFLSA+V ++ D+ V + L VEAD YWCLTKLLD IQDHYT QPGLQRMV R+EELV R D DL +HI E +G+ ++QFAFRWMNCLLMRE+PL A++R WDTYL E++GFESFHVYV AA+L F L+ ++FQ +V+FLQ +PTK+W E++++PLLS+A+IL F SP+HL
Sbjct: 158 NHRSEQFHQMLKSDVVDLDKMRELSWGGIPVHHRPTAWRLLLGYMPSKQDRREAMLQRKRQEYVELLQQYYYIPDTDRGAKEQTTLRQILVDIPRTNADVKLFQEERIHQLMERVLYTWAIRHPASGYVQGINDLLTPFLVVFLSAYVDEP-QTCDLSVVSDESLQTVEADSYWCLTKLLDGIQDHYTFAQPGLQRMVQRMEELVHRCDGDLFKHIVEREGVQFVQFAFRWMNCLLMREVPLNAIIRLWDTYLCEDSGFESFHVYVCAAILMTFGEKLKTLEFQDLVLFLQHLPTKDWVEDEIDPLLSRAFILQTYFADSPSHL 480
BLAST of mRNA_A-nodosum_M_contig820.3.2 vs. uniprot
Match: K0SU51_THAOC (Rab-GAP TBC domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SU51_THAOC) HSP 1 Score: 396 bits (1018), Expect = 3.070e-124 Identity = 189/339 (55.75%), Postives = 249/339 (73.45%), Query Frame = 1
Query: 700 STTPSPVLANRP--SYRDKRFAEVLGEDIVKLDELRKLSWNGVPQVHRAAVWQLLVGYMPANRSRRAVAMERKRREYREAVPQYFDVPDAARSHQEQNILRQILVDVPRTCPDVPFFHQDKVQRAMERILYIWAIRHPASGYVQGINDIMTPLYVVFLSAHVG--PAVESKDVGKVEEVLLDEVEADVYWCLTKLLDNIQDHYTAMQPGLQRMVLRLEELVQRIDADLHRHITEQGLMYIQFAFRWMNCLLMRELPLRAVVRAWDTYLTEENGFESFHVYVSAALLCHFSSTLREMDFQTMVMFLQDMPTKEWGEEQVEPLLSQAYILSMLFEGSPNHL 1704
STTP N P +YR+++F +L IV + ELRKLSWNGVP R VW++L+GY+PAN SR +R+RREY++++ Q++D+PD +R++ EQ LRQ+LVDVPRT PDVP FH D+V+R + R+LYIWA+RHPAS YVQGIND+ TPL VFLS + ++ + + V + +L+EVEAD YWCLT LL IQDHYT+ QPG+QRMV+ LEELV RIDADL H+ G+ +IQFAF+WMNCLL+RE L V+R WDTYL+EE GFE FHVYV A+ L HFS+ L++M F + F+Q+MPT +WG+ + E LLS A++LS LF+GS HL
Sbjct: 121 STTPR----NYPPITYRERQFDIMLNSPIVPVRELRKLSWNGVPAPLRPKVWKILLGYLPANSSRHETTYKRRRREYKDSIKQHYDIPDDSRTNSEQETLRQVLVDVPRTAPDVPLFHNDRVRRCLSRLLYIWAMRHPASSYVQGINDLATPLISVFLSGYFEGEDCLDGERMQDVTDSILEEVEADTYWCLTNLLAGIQDHYTSDQPGMQRMVMHLEELVSRIDADLASHLKNTGIEFIQFAFKWMNCLLLREFKLSCVMRLWDTYLSEERGFEEFHVYVCASFLVHFSAELQQMGFDELFQFMQNMPTHDWGDRECEILLSSAFVLSTLFKGSEAHL 455 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig820.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig820.3.2 >prot_A-nodosum_M_contig820.3.2 ID=prot_A-nodosum_M_contig820.3.2|Name=mRNA_A-nodosum_M_contig820.3.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=571bp MEGSLSSANKAEPSSGTASNLDSFFKRLGQGQGSRLWTGPGRASRAVPGSback to top mRNA from alignment at A-nodosum_M_contig820:58748..64600- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig820.3.2 ID=mRNA_A-nodosum_M_contig820.3.2|Name=mRNA_A-nodosum_M_contig820.3.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5853bp|location=Sequence derived from alignment at A-nodosum_M_contig820:58748..64600- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig820:58748..64600- >mRNA_A-nodosum_M_contig820.3.2 ID=mRNA_A-nodosum_M_contig820.3.2|Name=mRNA_A-nodosum_M_contig820.3.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1713bp|location=Sequence derived from alignment at A-nodosum_M_contig820:58748..64600- (Ascophyllum nodosum dioecious)back to top |