mRNA_A-nodosum_M_contig82.74.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig82.74.1 vs. uniprot
Match: A0A329RB62_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RB62_9STRA) HSP 1 Score: 129 bits (324), Expect = 5.150e-33 Identity = 72/167 (43.11%), Postives = 98/167 (58.68%), Query Frame = 1
Query: 4 DLGEVSYYLGCHITRDRKARTVRFDQQRYAQTVAERFEVWKTSVIPIST-GKAPLSNADGPQNDAEIAEMRGIPYREAVGALMWVANMTRPDLVFTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGAT-----EDNMKLTAWVDADHASCPDTRRSVSG 486
DLGE Y LG ITR+RK R++ Q++YA V +RF + + T G L+ PQ +A+ AEM+ IPYREAVG+ M++ TRPDL + +++F NPG HW AV + L YL T +LG+T GG + LT + DAD+A+ DTRRSV G
Sbjct: 3 DLGEAQYLLGWSITRNRKNRSIFIHQEKYATKVLDRFSHLDSHPVGTPTDGSLKLTQDMCPQIEADKAEMKAIPYREAVGSFMYLMMGTRPDLAYFLREVSQFLANPGQAHWNAVKRGLNYLNGTRNLGITLGGIQNLEQYQSQNYLTVFTDADYANYQDTRRSVGG 169
BLAST of mRNA_A-nodosum_M_contig82.74.1 vs. uniprot
Match: A0A6G0W6P6_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W6P6_9STRA) HSP 1 Score: 134 bits (338), Expect = 7.440e-32 Identity = 75/165 (45.45%), Postives = 101/165 (61.21%), Query Frame = 1
Query: 1 KDLGEVSYYLGCHITRDRKARTVRFDQQRYAQTVAERFEVWKTSVI--PISTGKAPLSNADGPQNDAEIAEMRGIPYREAVGALMWVANMTRPDLVFTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATE-DNMKLTAWVDADHASCPDTRRSVSG 486
KDLGE LG I R+R RT+ Q RY +TV ERF++ ++ + P + K LS + +I+ M PYR VG+ M++A TRPDL F L++F DNPGP HW+A +AL+YL T S G+ GG+ N L+A+VDAD+A+CPDTRR VSG
Sbjct: 556 KDLGEARDILGWQIERNRSERTLFLHQTRYCETVVERFDMASSNPVHTPFESSKT-LSKSQCATTPEDISFMASKPYRSLVGSPMYLAMGTRPDLAFPLQQLSQFLDNPGPAHWRAAKRALRYLNGTRSRGLLLGGSDSVHNPFLSAYVDADYANCPDTRRCVSG 719
BLAST of mRNA_A-nodosum_M_contig82.74.1 vs. uniprot
Match: A0A2P4X6C4_9STRA (Integrase catalytic core protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X6C4_9STRA) HSP 1 Score: 134 bits (336), Expect = 9.130e-32 Identity = 76/169 (44.97%), Postives = 105/169 (62.13%), Query Frame = 1
Query: 4 DLGEVSYYLGCHITRDRKARTVRFDQQRYAQTVAERFEVWKTSVIPISTG---KAPLSNADGPQNDAEIAEMRGIPYREAVGALMWVANMTRPDLVFTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGA---TEDNM--KLTAWVDADHASCPDTRRSVSG 486
DLGEV Y LG I RDRK RT+ Q +YA V +RF + PI+T A LS + P ++ E M IPYR+AVG++M++ TRPD+ F +++F NPG EHWKAV++ L+YL T G+ GG+ T +N+ +L A+ D+D+A+CPDTRRSV G
Sbjct: 438 DLGEVKYLLGWSIQRDRKNRTIFIHQHKYATKVIDRFSDYIP--YPIATPAERNAKLSVSSQPSSEQEKDAMSSIPYRQAVGSVMYLMVGTRPDMAFYMREVSQFLANPGMEHWKAVIRGLKYLSGTKEYGLLLGGSSDITSENLADQLVAYSDSDYANCPDTRRSVGG 604
BLAST of mRNA_A-nodosum_M_contig82.74.1 vs. uniprot
Match: A0A5D6XRE8_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRE8_9STRA) HSP 1 Score: 128 bits (321), Expect = 1.810e-31 Identity = 67/167 (40.12%), Postives = 96/167 (57.49%), Query Frame = 1
Query: 4 DLGEVSYYLGCHITRDRKARTVRFDQQRYAQTVAERFEVWKTSVIPISTGKA-PLSNADGPQNDAEIAEMRGIPYREAVGALMWVANMTRPDLVFTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGAT-----EDNMKLTAWVDADHASCPDTRRSVSG 486
D G+ Y +G + RDRK RT+ Q+ YA TV +RF + I T K+ L+ A P + EM +PYR+AVG++M++ TRPD + +++F NPG E+W AV L+YLK T +LG+T GG E L+A+ DA +A+C DTRRS+ G
Sbjct: 116 DFGDAHYLIGWNTVRDRKQRTIHIHQENYANTVFKRFNHLDAQTVSIPTDKSIVLTQAMCPSTKEKTEEMANVPYRDAVGSVMYLIMSTRPDHAYFLREVSQFHVNPGREYWNAVKHGLKYLKGTTALGITLGGRENLTLLEKKTFLSAYTDASYANCKDTRRSIGG 282
BLAST of mRNA_A-nodosum_M_contig82.74.1 vs. uniprot
Match: A0A4S4K4A0_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4K4A0_9AGAM) HSP 1 Score: 124 bits (311), Expect = 3.310e-31 Identity = 66/163 (40.49%), Postives = 91/163 (55.83%), Query Frame = 1
Query: 4 DLGEVSYYLGCHITRDRKARTVRFDQQRYAQTVAERFEVWKTSVI--PISTGKAPLSNADGPQNDAEIAEMRGIPYREAVGALMWVANMTRPDLVFTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDNMKLTAWVDADHASCPDTRRSVSG 486
DLG S+ LG + RDR R + Q++Y + ERFE+ + + P+ G LS A P++ EIA M+ +PYR+ VGALM++A TRPD+ + LA+F NPGP HWKA +YL+ T + +TY T + DADH D RRS SG
Sbjct: 26 DLGPTSFLLGVRVERDRSKRLLSLSQRQYITDILERFEMSNCTTVTTPLPDGHR-LSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRRSTSG 187
BLAST of mRNA_A-nodosum_M_contig82.74.1 vs. uniprot
Match: A0A6H5JRE7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE7_9PHAE) HSP 1 Score: 128 bits (322), Expect = 5.730e-31 Identity = 69/163 (42.33%), Postives = 94/163 (57.67%), Query Frame = 1
Query: 1 KDLGEVSYYLGCHITRDRKARTVRFDQQRYAQTVAERFEVWKTSVIPISTGKAPLSNADGPQNDAEIAEMRGIPYREAVGALMWVANMTRPDLVFTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDNMKLTAWVDADHASCPDTRRSVSGS 489
K+LGEV ++LGC I+RDR+A T+ Q+ Y + V ERF + +TS IP S P +++ D E + +P+RE VG LMW+AN TRP+ T+A+ P WKA K L YLK TA L + Y T ++ +VDAD AS RRSVSG+
Sbjct: 96 KNLGEVRFFLGCEISRDREAGTIEISQESYIRNVLERFNICRTSSIPAS----PANDSRSVMEDEEAGD---VPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGA 251
BLAST of mRNA_A-nodosum_M_contig82.74.1 vs. uniprot
Match: A0A8H5M255_9AGAR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tricholomella constricta TaxID=117010 RepID=A0A8H5M255_9AGAR) HSP 1 Score: 125 bits (313), Expect = 6.040e-30 Identity = 68/163 (41.72%), Postives = 96/163 (58.90%), Query Frame = 1
Query: 4 DLGEVSYYLGCHITRDRKARTVRFDQQRYAQTVAER--FEVWKTSVIPISTGKAPLSNADGPQNDAEIAEMRGIPYREAVGALMWVANMTRPDLVFTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDNMKLTAWVDADHASCPDTRRSVSG 486
DLGE+ + LG I RDR RT+ Q+ Y ++ R F+ K IP+ T A LS+A P AE A+MR +PY EAVG+LM+ A TRPD+ F T+++F PGP HW+AV + +YLK + L + YGG + +L + DAD + D R ++SG
Sbjct: 60 DLGELHWLLGIEIKRDRDRRTISLSQRSYLDSILRRYGFQDLKPVSIPMDTN-ARLSSAQSPATTAEFAQMRDVPYLEAVGSLMYAALGTRPDIAFAVQTVSRFSKKPGPAHWEAVKRIFRYLKGSTELWLVYGG---NQKELVGYADADGSMAED-RHAISG 217
BLAST of mRNA_A-nodosum_M_contig82.74.1 vs. uniprot
Match: A0A4S4LBP1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4LBP1_9AGAM) HSP 1 Score: 124 bits (311), Expect = 1.220e-29 Identity = 66/163 (40.49%), Postives = 91/163 (55.83%), Query Frame = 1
Query: 4 DLGEVSYYLGCHITRDRKARTVRFDQQRYAQTVAERFEVWKTSVI--PISTGKAPLSNADGPQNDAEIAEMRGIPYREAVGALMWVANMTRPDLVFTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDNMKLTAWVDADHASCPDTRRSVSG 486
DLG S+ LG + RDR R + Q++Y + ERFE+ + + P+ G LS A P++ EIA M+ +PYR+ VGALM++A TRPD+ + LA+F NPGP HWKA +YL+ T + +TY T + DADH D RRS SG
Sbjct: 166 DLGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHR-LSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPSHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRRSTSG 327
BLAST of mRNA_A-nodosum_M_contig82.74.1 vs. uniprot
Match: A0A4S4L7S0_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4L7S0_9AGAM) HSP 1 Score: 123 bits (309), Expect = 1.270e-29 Identity = 66/163 (40.49%), Postives = 91/163 (55.83%), Query Frame = 1
Query: 4 DLGEVSYYLGCHITRDRKARTVRFDQQRYAQTVAERFEVWKTSVI--PISTGKAPLSNADGPQNDAEIAEMRGIPYREAVGALMWVANMTRPDLVFTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDNMKLTAWVDADHASCPDTRRSVSG 486
DLG S+ LG + RDR R + Q++Y + ERFE+ + + P+ G LS A P++ EIA M+ +PYR+ VGALM++A TRPD+ + LA+F NPGP HWKA +YL+ T + +TY T + DADH D RRS SG
Sbjct: 26 DLGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHR-LSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRRSTSG 187
BLAST of mRNA_A-nodosum_M_contig82.74.1 vs. uniprot
Match: A0A060S8R4_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S8R4_PYCCI) HSP 1 Score: 122 bits (305), Expect = 2.830e-29 Identity = 70/164 (42.68%), Postives = 96/164 (58.54%), Query Frame = 1
Query: 4 DLGEVSYYLGCHITRDRKARTVRFDQQRYAQTVAERFEVWKTSVIPISTGKAP---LSNADGPQNDAEIAEMRGIPYREAVGALMWVANMTRPDLVFTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDNMKLTAWVDADHASCPDTRRSVSG 486
DLG VS+ LG I+RD +A T Q Y + RF T + P+ST P LS P++ AE+A MR +PYREA+G LM+ A T+PD+VF TLA+F NPG HW AV + +YL T +L YGG + +L +VDAD A+ + RR+++G
Sbjct: 3 DLGPVSWLLGIKISRDLEAGTFSLSQHAYIDALLARFNF--TDLKPMSTPMDPHQLLSKTQCPESPAEVARMRRVPYREAIGVLMYAALGTQPDIVFAVSTLAQFAQNPGQPHWDAVKRVFRYLLGTRTLSRVYGG---EKRELEGFVDADGAT-QEHRRAITG 160 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig82.74.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig82.74.1 >prot_A-nodosum_M_contig82.74.1 ID=prot_A-nodosum_M_contig82.74.1|Name=mRNA_A-nodosum_M_contig82.74.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=172bp KDLGEVSYYLGCHITRDRKARTVRFDQQRYAQTVAERFEVWKTSVIPISTback to top mRNA from alignment at A-nodosum_M_contig82:939545..940397- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig82.74.1 ID=mRNA_A-nodosum_M_contig82.74.1|Name=mRNA_A-nodosum_M_contig82.74.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=853bp|location=Sequence derived from alignment at A-nodosum_M_contig82:939545..940397- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig82:939545..940397- >mRNA_A-nodosum_M_contig82.74.1 ID=mRNA_A-nodosum_M_contig82.74.1|Name=mRNA_A-nodosum_M_contig82.74.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=516bp|location=Sequence derived from alignment at A-nodosum_M_contig82:939545..940397- (Ascophyllum nodosum dioecious)back to top |