mRNA_A-nodosum_M_contig82.73.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig82.73.1 vs. uniprot
Match: D8LC30_ECTSI (Cytochrome P450 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC30_ECTSI) HSP 1 Score: 152 bits (383), Expect = 3.660e-39 Identity = 75/133 (56.39%), Postives = 88/133 (66.17%), Query Frame = 2
Query: 140 EDHWTKSGLKIEKGAPVMVLNRFASTSEDNFTRGAEFVPERWIESERADALLSKSQGDGVERNVRHVDEAFLVFGSGPRVCPGQDLAKAEATTIIAAVCSRFDVSLAPDQPDPPEEILRFTLGPKAIHLIFKR 538
ED KSG ++KG V+ LNR SED FTRG EFVPERWI SER AL K + + H +EAFL G GPR+CPGQD+AKAE IIAA+C+RFD+SLAP Q DPPEE FT GPK ++I R
Sbjct: 425 EDFTMKSGRVLKKGTAVLTLNRAVGISEDFFTRGDEFVPERWISSEREKALSEKQSTWIGKGGISHEEEAFLSMGHGPRICPGQDMAKAEGAIIIAAICARFDLSLAPGQADPPEEYSSFTCGPKEFNMILTR 557
BLAST of mRNA_A-nodosum_M_contig82.73.1 vs. uniprot
Match: D7FPK1_ECTSI (Cytochrome P450 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK1_ECTSI) HSP 1 Score: 130 bits (328), Expect = 1.550e-31 Identity = 64/139 (46.04%), Postives = 89/139 (64.03%), Query Frame = 2
Query: 125 TQTK*EDHWTKSGLKIEKGAPVMVLNRFASTSEDNFTRGAEFVPERWIESERADALLSKSQGDGVERNVRHVDEAFLVFGSGPRVCPGQDLAKAEATTIIAAVCSRFDVSLAPDQPDPPEEILRFTLGPKAIHLIFKRK 541
T+ E KSGLK+E G +L R+ SE +FTR +FVPERWI++ER +ALL + D +V H +E FG GPR CPG D+A EA I+AA+ +RFD++LAP Q DPPEE+ +FT G +++ L+ +K
Sbjct: 391 TRRSQETTTMKSGLKLEAGTAFTLLLRYPCLSEHSFTRAKDFVPERWIDAEREEALLGQP-ADRKSSDVVHREEVAQAFGGGPRKCPGMDMAHLEAAIILAAISARFDLALAPGQADPPEEVFKFTAGVESLKLVLTKK 528
BLAST of mRNA_A-nodosum_M_contig82.73.1 vs. uniprot
Match: UPI0012BC3AC0 (cytochrome P450 n=1 Tax=Xanthovirga aplysinae TaxID=2529853 RepID=UPI0012BC3AC0) HSP 1 Score: 84.3 bits (207), Expect = 4.890e-15 Identity = 42/122 (34.43%), Postives = 66/122 (54.10%), Query Frame = 2
Query: 170 IEKGAPVMVLNRFASTSEDNFTRGAEFVPERWIESERADALLSKSQGDGVERNVRHVDEAFLVFGSGPRVCPGQDLAKAEATTIIAAVCSRFDVSLAPDQPDPPEEILRFTLGPKAIHLIFK 535
++G +M+ N+ A TS+DNF +F+PERW+++ G + H E FGSGPR CPG++LA E ++ +C FD+ L +P+ +EI FT+ P+ + L FK
Sbjct: 468 FKQGTTIMMQNKVAQTSDDNFAEAGKFIPERWLKT-------------GCPVHGAHKPEMIKAFGSGPRFCPGKNLAMHEMIMSLSMICKNFDLELVV-KPEKVKEIFAFTMYPENLWLRFK 575
BLAST of mRNA_A-nodosum_M_contig82.73.1 vs. uniprot
Match: A0A523NR78_9PROT (Cytochrome P450 n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523NR78_9PROT) HSP 1 Score: 81.3 bits (199), Expect = 4.800e-14 Identity = 44/127 (34.65%), Postives = 64/127 (50.39%), Query Frame = 2
Query: 161 GLKIEKGAPVMVLNRFASTSEDNFTRGAEFVPERWIESERADALLSKSQGDGVERNVRHVDEAFLVFGSGPRVCPGQDLAKAEATTIIAAVCSRFDVSLAPDQPDPPEEILRFTLGPKAIHLIFKRK 541
G + G PV+ L R +T NF F P+RW++ D+ H +AFL FG+GPR CPG++LA E ++A +C FD++LA D EE L FT+ P + + F R+
Sbjct: 361 GYYLPPGTPVLALTRQVATDPTNFGAAERFDPDRWLDPASPDS-------------APHNTQAFLPFGTGPRFCPGRNLALVEIKIVLAMLCRNFDIALA-DPSRAVEEKLSFTMQPTNLTVNFSRR 473
BLAST of mRNA_A-nodosum_M_contig82.73.1 vs. uniprot
Match: A0A6L8G436_9RHOB (Cytochrome P450 n=2 Tax=unclassified Boseongicola TaxID=2634418 RepID=A0A6L8G436_9RHOB) HSP 1 Score: 79.3 bits (194), Expect = 2.220e-13 Identity = 46/134 (34.33%), Postives = 69/134 (51.49%), Query Frame = 2
Query: 143 DHWTKSGLKIEKGAPVMVLNRFASTSEDNFTRGAEFVPERWIESERADALLSKSQGDGVERNVRHVDEAFLVFGSGPRVCPGQDLAKAEATTIIAAVCSRFDVSLAPDQPDPPEEILRFTLGPKAIHLIFKRKE 544
D W G +I KG + +L R +T E++F G F PERW+ + A R+ H AF+ FG GPR CPG++LA E T++A +CS FDV P +E + FT+ P + + +R++
Sbjct: 359 DTWIL-GCRIPKGTTIFMLLRHLATREEHFVNGDCFDPERWLLRQEA-------------RHGPHDHRAFVPFGGGPRFCPGRNLAMLEIKTVLAMLCSNFDV--LPVNRTRVKEQIAFTMFPTNLFVRMRRRK 476
BLAST of mRNA_A-nodosum_M_contig82.73.1 vs. uniprot
Match: A0A171DFC1_9SYNE (Cytochrome P450 n=2 Tax=Candidatus Synechococcus spongiarum TaxID=431041 RepID=A0A171DFC1_9SYNE) HSP 1 Score: 79.0 bits (193), Expect = 3.140e-13 Identity = 45/127 (35.43%), Postives = 66/127 (51.97%), Query Frame = 2
Query: 161 GLKIEKGAPVMVLNRFASTSEDNFTRGAEFVPERWIESERADALLSKSQGDGVERNVRHVDEAFLVFGSGPRVCPGQDLAKAEATTIIAAVCSRFDVSLAPDQPDPPEEILRFTLGPKAIHLIFKRK 541
G + KG + VL R+A+T E++F G F PERW L + G G N H +AF+ FG+GPR+CPGQ LA E ++A +C FD+ + E+ + + P +HL KR+
Sbjct: 368 GCLMPKGTKLFVLLRYAATREEHFAGGDCFDPERW---------LPQPAGHG---NQPHNTQAFVPFGAGPRICPGQHLAMLEIRAVLAMLCRNFDLRPVSHGKEVKEK-MAVVMRPDHLHLRLKRR 481
BLAST of mRNA_A-nodosum_M_contig82.73.1 vs. uniprot
Match: A0A482SGT4_9ARCH (Cytochrome P450 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SGT4_9ARCH) HSP 1 Score: 78.2 bits (191), Expect = 5.790e-13 Identity = 48/121 (39.67%), Postives = 62/121 (51.24%), Query Frame = 2
Query: 164 LKIEKGAPVMVLNRFASTSEDNFTRGAEFVPERWIESERADALLSKSQGDGVERNVRHVDEAFLVFGSGPRVCPGQDLAKAEATTIIAAVCSRFDVSLAPDQPDPPEEILRFTLGPKAIHL 526
L +E+G V V SED F + A+F+PERW+ LSK++ EAFL FGSGPRVCPG LA EA IA++ FDV LA D + ++ TL P + L
Sbjct: 397 LILERGDVVWVYAEGVMQSEDIFQQPADFIPERWLCDHTDATKLSKTE------------EAFLAFGSGPRVCPGMHLALLEAVLAIASLVRNFDVCLACDAAEI-HRVINLTLAPNKMPL 504
BLAST of mRNA_A-nodosum_M_contig82.73.1 vs. uniprot
Match: A0A0F0G040_9BURK (Cytochrome P450 n=2 Tax=Burkholderiaceae TaxID=119060 RepID=A0A0F0G040_9BURK) HSP 1 Score: 77.8 bits (190), Expect = 8.470e-13 Identity = 42/127 (33.07%), Postives = 66/127 (51.97%), Query Frame = 2
Query: 161 GLKIEKGAPVMVLNRFASTSEDNFTRGAEFVPERWIESERADALLSKSQGDGVERNVRHVDEAFLVFGSGPRVCPGQDLAKAEATTIIAAVCSRFDVSLAPDQPDPPEEILRFTLGPKAIHLIFKRK 541
G+++ +G ++++NR + E NF EF PERW++ G +H F+ FGSGPR+CPG++LA EA I+ VC FD+ AP+ P E FT+ P + ++F +
Sbjct: 493 GVRVPRGTLLVLVNRPNALQERNFPAAREFRPERWLQ--------------GATPAAQH-HSGFVPFGSGPRLCPGRNLALLEAKAAISMVCQNFDIRRAPES-GPVGEAFGFTMMPTDLWVMFSAR 603
BLAST of mRNA_A-nodosum_M_contig82.73.1 vs. uniprot
Match: A0A6L7JQC4_9GAMM (Cytochrome P450 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L7JQC4_9GAMM) HSP 1 Score: 77.4 bits (189), Expect = 1.020e-12 Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 2
Query: 161 GLKIEKGAPVMVLNRFASTSEDNFTRGAEFVPERWIESERADALLSKSQGDGVERNVRHVDEAFLVFGSGPRVCPGQDLAKAEATTIIAAVCSRFDVSLAPDQPDPPEEILRFTLGPKAIHLIFKRK 541
G +I KG + +L R +T + NF F PERW+ SE +R H +AF+ FGSGPR+CPG++LA E +++ +C FD+ D E L FT+ P+ + + +++
Sbjct: 369 GCQIPKGTTIQMLTRKTATKDSNFINANLFEPERWLNSE-------------AQRYRPHERQAFIPFGSGPRICPGRNLALFEIRMVLSMLCHNFDLDTIHGT-DEVNERLAFTMMPENLTVNLRKR 481
BLAST of mRNA_A-nodosum_M_contig82.73.1 vs. uniprot
Match: UPI0015656D9A (cytochrome P450 n=1 Tax=Paraburkholderia sp. NMBU_R16 TaxID=2698676 RepID=UPI0015656D9A) HSP 1 Score: 75.1 bits (183), Expect = 7.000e-12 Identity = 42/128 (32.81%), Postives = 66/128 (51.56%), Query Frame = 2
Query: 161 GLKIEKGAPVMVLNRFASTSEDNFTRGAEFVPERWIESERADALLSKSQGDGVERNVRHVDEAFLVFGSGPRVCPGQDLAKAEATTIIAAVCSRFDVSLAPDQPDPPEEILRFTLGPKAIHLIFKRKE 544
G+ + KG +++L R+ + E ++ R F P+RWI ++G+ N D F+ FGSGPR CPG++LA E IA +C F +S++P EE L FT+ P + L F ++
Sbjct: 489 GVSVPKGTIIILLTRYPNLLEQHYVRAQTFDPDRWI-----------AEGE----NALPRDARFVAFGSGPRYCPGRNLAMLEIKCAIAMLCRNFHLSVSPACASV-EERLSFTMMPHGLRLNFVTRD 600 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig82.73.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig82.73.1 >prot_A-nodosum_M_contig82.73.1 ID=prot_A-nodosum_M_contig82.73.1|Name=mRNA_A-nodosum_M_contig82.73.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=126bp MVLNRFASTSEDNFTRGAEFVPERWIESERADALLSKSQGDGVERNVRHVback to top mRNA from alignment at A-nodosum_M_contig82:934762..937201- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig82.73.1 ID=mRNA_A-nodosum_M_contig82.73.1|Name=mRNA_A-nodosum_M_contig82.73.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2440bp|location=Sequence derived from alignment at A-nodosum_M_contig82:934762..937201- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig82:934762..937201- >mRNA_A-nodosum_M_contig82.73.1 ID=mRNA_A-nodosum_M_contig82.73.1|Name=mRNA_A-nodosum_M_contig82.73.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=378bp|location=Sequence derived from alignment at A-nodosum_M_contig82:934762..937201- (Ascophyllum nodosum dioecious)back to top |