mRNA_A-nodosum_M_contig82.39.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig82.39.1 vs. uniprot
Match: A0A7R9YVQ9_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YVQ9_9CHLO) HSP 1 Score: 206 bits (525), Expect = 2.140e-60 Identity = 96/191 (50.26%), Postives = 119/191 (62.30%), Query Frame = 2
Query: 173 IAPFGIAPGVKRMMRQERAAAEQAIKTGTYVTWRSLKTGLDCARVGLKSRCFCGCSYEMHDFRRGIC-MPVCRRCECRGFDYVPSRPEEIGEWWLSRRGGFDASEWRAKCRCGHPHDAHHPVRRSCTSCKCGEFSSSYGCVACDCHQEDHRTYVESVQERKAAGRPVGQEFVPLSQKPHLSRLAFGRREAS 742
+A G+APG + M+ E AAA AI+ GTY TWRS K G DC RVG +RCFCG ++E H F P C C C GF +VP RPEE+GEWWL RR GF+ WRAKCRCGH HD H P+ + C SC C F S++ C+ CD E+H T E+ +ER AAGRPVG F PL+ L ++ F +S
Sbjct: 15 VAKHGVAPGGRAMIDLEAAAAVHAIENGTYATWRSQK-GEDCTRVGPGARCFCGHAFEEHQFLSSRAPAPRCCSCACGGFSFVPQRPEEVGEWWLPRRKGFNVHTWRAKCRCGHAHDVHEPLYKRCLSCGCSTFQSNFACLVCDGKWEEHETVFETTRERIAAGRPVGDAFKPLADDAELQKMVFSNDTSS 204
BLAST of mRNA_A-nodosum_M_contig82.39.1 vs. uniprot
Match: A0A150FWK8_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150FWK8_GONPE) HSP 1 Score: 206 bits (523), Expect = 3.420e-60 Identity = 98/190 (51.58%), Postives = 120/190 (63.16%), Query Frame = 2
Query: 182 FGIAPGVKRMMRQERAAAEQAIKTGTYVTWRSLKTGLDCARVGLKSRCFCGCSYEMHDFRRGIC-MPVCRRCECRGFDYVPSRPEEIGEWWLSRRGGFDASEWRAKCRCGHPHDAHHPVRRSCTSCKCGEFSSSYGCVACDCHQEDHRTYVESVQERKAAGRPVGQEFVPLSQKPHLSRLAFGRREASSS 748
+G+APG ++M+ E AAA+ A++TG Y WRS K G DC R+ SRCFC SY H F PVC+ C CR F ++PSRPEE+GEWWL RR GF+ WRAKCRCGH HD H P R C C C F S++ C+ACD EDH T E+ QER AGRPVG EF PLS P + + F A++S
Sbjct: 17 YGLAPGARKMIDAEEAAAQMAMETGIYGVWRSSK-GTDCTRIAPTSRCFCNHSYAEHFFVSPKSPYPVCKGCSCRAFAFIPSRPEEVGEWWLPRRKGFNVHTWRAKCRCGHGHDEHDPTHRRCR-CGCPAFISNFACLACDLKWEDHETVFETAQERLIAGRPVGDEFRPLSDDPTIRDMVFPTDHAAAS 204
BLAST of mRNA_A-nodosum_M_contig82.39.1 vs. uniprot
Match: A0A7S3QLF0_DUNTE (Hypothetical protein (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QLF0_DUNTE) HSP 1 Score: 201 bits (510), Expect = 5.890e-59 Identity = 90/179 (50.28%), Postives = 117/179 (65.36%), Query Frame = 2
Query: 143 PPPENVLFLAIAPFGIAPGVKRMMRQERAAAEQAIKTGTYVTWRSLKTGLDCARVGLKSRCFCGCSYEMHDF-RRGICMPVCRRCECRGFDYVPSRPEEIGEWWLSRRGGFDASEWRAKCRCGHPHDAHHPVRRSCTSCKCGEFSSSYGCVACDCHQEDHRTYVESVQERKAAGRPVGQ 676
P N + A++ +G+APG ++MM E AAEQAI TG YVT+RS +DC RVG S+CFCG Y H F + P C CEC GF ++P RPEE+G+WWL RR GF+ WRAKC+CGH H+ HHP R+ C C C +F S++ C+ACD EDH T+ E+ +R AAG PVG+
Sbjct: 4 PRDRNAVAAAVSQYGVAPGARKMMDWEEEAAEQAISTGMYVTFRS-SPRMDCTRVGPHSKCFCGHLYSEHSFISKKSVYPRCHNCECTGFQFIPRRPEEVGDWWLVRRKGFNVHTWRAKCKCGHSHEEHHPTRKRC-QCGCPQFQSNFACLACDKKWEDHETFFETTADRMAAGLPVGE 180
BLAST of mRNA_A-nodosum_M_contig82.39.1 vs. uniprot
Match: A0A7S0V496_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0V496_9CHLO) HSP 1 Score: 201 bits (511), Expect = 2.010e-58 Identity = 92/195 (47.18%), Postives = 121/195 (62.05%), Query Frame = 2
Query: 143 PPPENVLFLAIAPFGIAPGVKRMMRQERAAAEQAIKTGTYVTWRSLKTGLDCARVGLKSRCFCGCSYEMHDFR-RGICMPVCRRCECRGFDYVPSRPEEIGEWWLSRRGGFDASEWRAKCRCGHPHDAHHPVRRSCTSCKCGEFSSSYGCVACDCHQEDHRTYVESVQERKAAGRPVGQEFVPLSQKPHLSRLAF 724
P N + AI FG+APG ++M+ E AAE AI+TG Y ++R+ K DC R+G SRCFC ++ H+F + P C C C+ F ++P RPEE+GEWWL RR GFD WRAKCRCGH HD H PV R C+ C CG+F+S + C++CD + E H T ES ER AA +P+G + P S P + L F
Sbjct: 4 PRTRNQVQSAIKQFGVAPGGRKMIDMENEAAEYAIETGIYGSFRNDKKE-DCTRIGPSSRCFCYHNFSQHNFASKKSVFPHCTLCRCKAFSFIPQRPEEVGEWWLPRRKGFDVRTWRAKCRCGHGHDDHDPVARHCSVCGCGQFNSVFACLSCDMNWEHHETVFESEMERAAASKPIGNAYRPFSDDPSMRSLVF 197
BLAST of mRNA_A-nodosum_M_contig82.39.1 vs. uniprot
Match: A0A7S3VH60_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VH60_DUNTE) HSP 1 Score: 206 bits (523), Expect = 6.480e-58 Identity = 93/184 (50.54%), Postives = 119/184 (64.67%), Query Frame = 2
Query: 143 PPPENVLFLAIAPFGIAPGVKRMMRQERAAAEQAIKTGTYVTWRSLKTGLDCARVGLKSRCFCGCSYEMHDF-RRGICMPVCRRCECRGFDYVPSRPEEIGEWWLSRRGGFDASEWRAKCRCGHPHDAHHPVRRSCTSCKCGEFSSSYGCVACDCHQEDHRTYVESVQERKAAGRPVGQEFVPL 691
P N + A++ +G+APG ++MM E AAEQAI TG YVT+RS +DC RVG S+CFCG Y H F + P C CEC GF ++P RPEE+G+WWL RR GF+ WRAKC+CGH H+ HHP R+ C C C +F S++ C+ACD EDH T+ E+ +R AAG PVG F PL
Sbjct: 4 PRDRNAVAAAVSQYGVAPGARKMMDWEEEAAEQAISTGMYVTFRS-SPRMDCTRVGPHSKCFCGHLYSEHSFISKKSVYPRCHNCECTGFQFIPRRPEEVGDWWLVRRKGFNVHTWRAKCKCGHSHEEHHPTRKRC-QCGCPQFQSNFACLACDKKWEDHETFFETTADRMAAGLPVGDAFRPL 185
BLAST of mRNA_A-nodosum_M_contig82.39.1 vs. uniprot
Match: A0A0G4EG44_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EG44_VITBC) HSP 1 Score: 201 bits (510), Expect = 9.740e-58 Identity = 91/190 (47.89%), Postives = 117/190 (61.58%), Query Frame = 2
Query: 161 LFLAIAPFGIAPGVKRMMRQERAAAEQAIKTGTYVTWRSLKTGLDCARVGLKSRCFCGCSYEMHDFRRGICM-PVCRRCECRGFDYVPSRPEEIGEWWLSRRGGFDASEWRAKCRCGHPHDAHHPVRR-SCTSCKCGEFSSSYGCVACDCHQEDHRTYVESVQERKAAGRPVGQEFVPLSQKPHLSRLAF 724
L + +G APG K M+ ER AA AI+TG Y WRS TG DC R+ S+CFCG H+F+ + P C CEC+ + +VP+RPEE+GEWWL RR GFD WRAKC+C H H+ H P R C C C F+S++ C+ACD H EDH T ES ER+AAGRPV ++FVP ++ P +
Sbjct: 16 LLAGVRQYGPAPGAKVMLENERTAANTAIETGQYAVWRSC-TGNDCFRIAPHSKCFCGHPLSSHEFKNSRALWPHCTMCECKAYAFVPTRPEEVGEWWLPRRPGFDVRTWRAKCKCKHTHEEHMPNRPYRCRKCPCSTFTSAFLCIACDKHWEDHETVFESEAERRAAGRPVNEDFVPFAEMPEFYEAVY 204
BLAST of mRNA_A-nodosum_M_contig82.39.1 vs. uniprot
Match: A0A7S0WIW7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WIW7_9CHLO) HSP 1 Score: 195 bits (496), Expect = 7.860e-57 Identity = 91/172 (52.91%), Postives = 112/172 (65.12%), Query Frame = 2
Query: 182 FGIAPGVKRMMRQERAAAEQAIKTGTYVTWRSLKTGLDCARVGLKSRCFCGCSYEMHDFR-RGICMPVCRRCECRGFDYVPSRPEEIGEWWLSRRGGFDASEWRAKCRCGHPHDAHHPVRRSCTSCKCGEFSSSYGCVACDCHQEDHRTYVESVQERKAAGRPVGQEFVPLS 694
FG+APG ++MM E AA+QAI+TG YV +R+ G DC RVG S+CFCG Y H F R P C C CR F +VP RPEE+G+WWL RR GF+ WRAKCRCGHPH+ H P + C C C F S++ C+ACD EDH T E+ QER AAGR G++F PL+
Sbjct: 18 FGVAPGARKMMDMEEEAAQQAIETGLYVVYRN-NNGQDCTRVGPSSKCFCGHYYRDHAFATRKSVYPHCASCACRAFAFVPQRPEEVGDWWLVRRKGFNVHTWRAKCRCGHPHEEHDPNTKRCR-CGCAVFVSNFACLACDKKWEDHETVFETTQERLAAGRTAGEDFRPLA 187
BLAST of mRNA_A-nodosum_M_contig82.39.1 vs. uniprot
Match: A0A7S1RQ14_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RQ14_ALECA) HSP 1 Score: 194 bits (492), Expect = 7.430e-56 Identity = 91/194 (46.91%), Postives = 125/194 (64.43%), Query Frame = 2
Query: 170 AIAPFGIAPGVKRMMRQERAAAEQAIKTGTYVTWRSLKTGLD-CARVGLKSRCFCGCSYEMHDFR--RGICMPVCRRCECRGFDYVPSRPEEIGEWWLSRRGGFDASEWRAKCRCGHPHDAHHPVRRSCTSC--KCGEFSSSYGCVACDCHQEDHRTYVESVQERKAAGRPVGQEFVPLSQKPHLSRLAFGRRE 736
A+ FG +PG K+MM E+AAAE+A++TG Y WR+ G D C R+G +SRCFCG Y H++ R P C +C CR F Y+P RPEE+GEWWL RR GFD + WRAKC+CG+ HD H P +C C G+++S++ CV+C+ EDH + ES +ER+ RPVGQ F+PL+ P + + F +E
Sbjct: 12 AVQQFGPSPGAKKMMAAEQAAAEEAVRTGLYGIWRNASNGSDFCGRIGPQSRCFCGHGYGQHEWTAARKEQAPACTKCPCRKFKYIPRRPEEVGEWWLPRRRGFDINLWRAKCKCGYGHDEHDP---NCLRCPGSGGKYTSAWLCVSCEGKWEDHESLWESEEERRLTNRPVGQAFMPLASTPGIRQAVFEHQE 202
BLAST of mRNA_A-nodosum_M_contig82.39.1 vs. uniprot
Match: A0A835SDR5_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835SDR5_9CHLO) HSP 1 Score: 191 bits (486), Expect = 2.060e-55 Identity = 90/173 (52.02%), Postives = 112/173 (64.74%), Query Frame = 2
Query: 209 MMRQERAAAEQAIKTGTYVTWRSLKTGLDCARVGLKSRCFCGCSYEMHDFRRGIC-MPVCRRCECRGFDYVPSRPEEIGEWWLSRRGGFDASEWRAKCRCGHPHDAHHPVRRSCTSCKCGEFSSSYGCVACDCHQEDHRTYVESVQERKAAGRPVGQEFVPLSQKPHLSRLAF 724
M+ E AAA+ A++TG Y WRS K G DC R+G K+RCFC + H F P+C+ C CRGF ++PSRPEEIGEWWL RR GF+ WRAKCRCGH HD H P R C C C F+S++ C+ACD EDH T E+ +ER AGRPVG++F PL+ P L + F
Sbjct: 1 MIDAEEAAAQLAMQTGIYGVWRSAKGG-DCTRIGPKARCFCDHPFADHFFVSPKSPYPICKSCNCRGFAFIPSRPEEIGEWWLPRRKGFNVHTWRAKCRCGHGHDEHDPHTRRCR-CGCPAFTSNFACLACDLKWEDHETVFETARERLVAGRPVGEDFRPLADDPALRDMVF 171
BLAST of mRNA_A-nodosum_M_contig82.39.1 vs. uniprot
Match: A0A813HAF7_POLGL (Hypothetical protein (Fragment) n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HAF7_POLGL) HSP 1 Score: 196 bits (498), Expect = 3.050e-55 Identity = 91/202 (45.05%), Postives = 121/202 (59.90%), Query Frame = 2
Query: 152 ENVLFLAIAPFGIAPGVKRMMRQERAAAEQAIKTGTYVTWRSLKTGLD-CARVGLKSRCFCGCSYEMHDFRRGIC--MPVCRRCECRGFDYVPSRPEEIGEWWLSRRGGFDASEWRAKCRCGHPHDAHHPVRRSCTSCKCGEFSSSYGCVACDCHQEDHRTYVESVQERKAAGRPVGQEFVPLSQKPHLSRLAFGRREASSS 748
E + A+ FG PG K+MM ER AAE+A++TG Y WR+ + D C R+G SRCFCG Y H + +G P C C C GF Y+P RPEE+GEWWL RR GFD WRA C+CGH H+ H C C C FSS++ CV+C+ +DH T ES +ER+ GR VGQ F+PLS P + ++ +++ +S
Sbjct: 82 EANILQAVRTFGAPPGAKKMMDAERLAAEEAMRTGLYGIWRNASSSHDFCGRIGPMSRCFCGHDYGAHAWSKGRKEPRPKCGSCGCPGFRYIPRRPEEVGEWWLPRRRGFDVRLWRANCKCGHSHEEHDSSSLRCRGCGCPSFSSAWECVSCEGKWQDHETLWESEEERRHCGRSVGQAFMPLSSTPEVQQIVLSKQQGPTS 283 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig82.39.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig82.39.1 >prot_A-nodosum_M_contig82.39.1 ID=prot_A-nodosum_M_contig82.39.1|Name=mRNA_A-nodosum_M_contig82.39.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=312bp MTSQTPPPENVLFLAIAPFGIAPGVKRMMRQERAAAEQAIKTGTYVTWRSback to top mRNA from alignment at A-nodosum_M_contig82:436925..441239- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig82.39.1 ID=mRNA_A-nodosum_M_contig82.39.1|Name=mRNA_A-nodosum_M_contig82.39.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4315bp|location=Sequence derived from alignment at A-nodosum_M_contig82:436925..441239- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig82:436925..441239- >mRNA_A-nodosum_M_contig82.39.1 ID=mRNA_A-nodosum_M_contig82.39.1|Name=mRNA_A-nodosum_M_contig82.39.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=936bp|location=Sequence derived from alignment at A-nodosum_M_contig82:436925..441239- (Ascophyllum nodosum dioecious)back to top |