mRNA_A-nodosum_M_contig818.9.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig818.9.1
Unique NamemRNA_A-nodosum_M_contig818.9.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig818.9.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 498 bits (1283), Expect = 4.260e-164
Identity = 237/441 (53.74%), Postives = 309/441 (70.07%), Query Frame = 1
Query:    4 SFHSNAFSCQRGEFLGYHLSNSVFEALCNGCKEPCEGCHFERPSVSPFCSKTIENSDSPGGLTTLERVMINPGYWRATPLGKQALPCYNTDACLGGLTGEPDFCLKGYEGPYCAICSDGFSASLGFICKICSNSIGGIFVAIVFVLVLLVALILAVSYLLSTELDRGTQRRACVERLMRCIPMQSVKIVIVTWQIVIQFVSVANVQYPHEYQRFLEGVKLLDFDLGWMLSASCVVDIDFHDRLFFATIGPIVVILLLAMTYYIAARRDHRSEGAVQNLQHKHLSAVLLLTFFVYSNVSSMLFQTFACDHLEDGELYLRADYRIECDSATHEKLQAYAAIMIIMYTFGIPVFYATLLFKNQDILKADESSRNNCSRVITTSSLWRPYKPRVFYFEAIECIRRALLVGVTLFFNPNTASQIAVTLILAFTFVVISESLDPYAS 1326
            SF  N + CQ G FL    S +++EA+C+GC   CEGC FE P + P CS  +E+S+S GG  TL+ ++I PGYWRATP  +  L CYN DACLGG+TG   +CL+GYEGPYCA+CS G++A LG  C  CS+  G I + +   +  L+  +  VSY +S E +   + R  VER  R +P+QSVKIVIV WQI+ QF SVAN+++PH YQRFL+ ++L +FDLGW+LSA CV D+DFHDRL  +TI PIV +L LA  Y  AAR  HRS   +Q + HKH+S VLLLTF VY++VS++LFQTFAC+ L+D + YLRADYRIECDS  H   Q YA  MI++YT GIP  Y   LF++ D+L+ DE+ R   +R+  T+ LW+PY+P VFY+E IEC RR LL GV +F  PNTA+QIAV L++A  F +ISE+L PYAS
Sbjct:  454 SFSRNVYGCQEGMFLECEESGTLYEAICDGCPVECEGCSFEEPQLVPKCSDALEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEG--RARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYAS 892          
BLAST of mRNA_A-nodosum_M_contig818.9.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 505 bits (1300), Expect = 2.250e-161
Identity = 245/442 (55.43%), Postives = 318/442 (71.95%), Query Frame = 1
Query:    4 SFHSNAFSCQRGEFLGYHLSNSVFEALCNGCKEPCEGCHFERPSVSPFCSKTIENSDSPGGLTTLERVMINPGYWRATPLGKQALPCYNTDACLGGLTGEPDFCLKGYEGPYCAICSDGFSASLGFICKICSNSIGGIFVAIVFVLVLLVALILAVSYLLSTELDRGTQRRACVERLMRCIPMQSVKIVIVTWQIVIQFVSVANVQYPHEYQRFLEGVKLLDFDLGWMLSASCVVDIDFHDRLFFATIGPIVVILLLAMTYYIAARRDHRSEGAVQNLQHKHLSAVLLLTFFVYSNVSSMLFQTFACDHLEDGELYLRADYRIECDSATHEKLQAYAAIMIIMYTFGIPVFYATLLFKNQDILKADESSRNNC-SRVITTSSLWRPYKPRVFYFEAIECIRRALLVGVTLFFNPNTASQIAVTLILAFTFVVISESLDPYAS 1326
            SF +N F C  G FLGY+ S  +FEA+CNGC+  C GC F  P + P C+  +E+S S  G  TLE + I  GYWRAT  G + L CY+ DACLGG+TG   +CL+GYEGPYCAICS+G+SA + F C+ CS++ GGI +A    +V LV L+  VSY+ S E  R  + R  VER+ R IP+QSVKIV+V WQI+ QF +VANV YPH YQ FL G+++ +FDL WMLSA CVVD+DFHDRL  ATIGPI   LLL  TY  A R    +   ++N++HKH+  VLLLTFFVYS+VS+ LF+TFAC+ LEDG+ YL ADYRIECDS+ H++ + YA  M+++YT GIP  Y+ LLF+++D+LK  E++  +  SR  +TS LW+PYKP VFY+E +EC RR LL GV +F  PN+++QIA+TLI+AFTFV+ISE L PYAS
Sbjct: 1088 SFSANGFDCPSGTFLGYNASADLFEAVCNGCQTACVGCAFADPLLVPTCTDLLEHSTSSDGRDTLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGE--RNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYAS 1527          
BLAST of mRNA_A-nodosum_M_contig818.9.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 478 bits (1229), Expect = 1.250e-152
Identity = 228/442 (51.58%), Postives = 313/442 (70.81%), Query Frame = 1
Query:    4 SFHSNAFSCQRGEFLGYHLS-NSVFEALCNGCKEPCEGCHFERPSVSPFCSKTIENSDSPGGLTTLERVMINPGYWRATPLGKQALPCYNTDACLGGLTGEPDFCLKGYEGPYCAICSDGFSASLGFICKICSNSIGGIFVAIVFVLVLLVALILAVSYLLSTELDRGTQRRACVERLMRCIPMQSVKIVIVTWQIVIQFVSVANVQYPHEYQRFLEGVKLLDFDLGWMLSASCVVDIDFHDRLFFATIGPIVVILLLAMTYYIAARRDHRSEGAVQNLQHKHLSAVLLLTFFVYSNVSSMLFQTFACDHLEDGELYLRADYRIECDSATHEKLQAYAAIMIIMYTFGIPVFYATLLFKNQDILKADESSRNNCSRVITTSSLWRPYKPRVFYFEAIECIRRALLVGVTLFFNPNTASQIAVTLILAFTFVVISESLDPYAS 1326
            SF  N F+C    FL Y  + N  FEA+C+GC+  C+GC F+ P   P CS  +++  S GG  TLE + I+PGYWRAT   K+ LPCYN DACLGG+TG   +CL+ YEGPYC+ICSDG++++LG+ C  C +  GGI  A+   ++ L   ++ + Y++S E   G +R   +ERL   +P+QSVKIVIV+WQI+ QF S ANV YP  YQ+FL+G+K+  FDLGW++SA CV+D+ FH RL  ATIGPI  +LLLA TY  A R +  +   ++ +  KH+   LLLTF VYS+VSS LF+TFACD LEDG+ YLR DYRIECDS+ H+  Q YA  MI++Y  GIP+ Y+ LLFK++++LK D++ R++ +RV +TS LW+PYKP VFY+E IEC RR LL G+ +F  PNTA+Q+A+TL++AF F ++SE++ PY+S
Sbjct:  903 SFTGNGFTCGPDLFLEYDATDNGTFEAVCDGCRVACDGCSFDEPPAVPTCSDVMDHGTSTGGKVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGE--AGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSS 1342          
BLAST of mRNA_A-nodosum_M_contig818.9.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 483 bits (1242), Expect = 4.200e-151
Identity = 235/443 (53.05%), Postives = 309/443 (69.75%), Query Frame = 1
Query:    4 SFHSNAFSCQRGEFLGYHLSNSVFEALCNGCKEPCE--GCHFERPSVSPFCSKTIENSDSPGGLTTLERVMINPGYWRATPLGKQALPCYNTDACLGGLTGEPDFCLKGYEGPYCAICSDGFSASLGFICKICSNSIGGIFVAIVFVLVLLVALILAVSYLLSTELDRGTQRRACVERLMRCIPMQSVKIVIVTWQIVIQFVSVANVQYPHEYQRFLEGVKLLDFDLGWMLSASCVVDIDFHDRLFFATIGPIVVILLLAMTYYIAARRDHRSEGAVQNLQHKHLSAVLLLTFFVYSNVSSMLFQTFACDHLEDGELYLRADYRIECDSATHEKLQAYAAIMIIMYTFGIPVFYATLLFKNQDILKADESSRNNCSRVITTSSLWRPYKPRVFYFEAIECIRRALLVGVTLFFNPNTASQIAVTLILAFTFVVISESLDPYAS 1326
            S+  N FSC  G FL ++ S    EA C+GC+ PC+  GC FE P + P C+  +E++ S GG   +  + ++ G+WRATP     LPCYN +ACL G+T     CL GYEGPYC+ICSDG++A L F C  CS+S GGI +A    +V L+  +  VSY++S ++  G+  R  VERL R IP+QS KIV+V+WQI+ QF +VANV YP  YQRFL+G+ + +FDL W+LSA C+V +DFHDRL  +TIGPIV +L L  TY  A R +  +   +Q + ++H+S VLLLT FVYS+VSS LFQTFAC+ L DGE YLRADYRI CDS+ H+ LQ YA +M+++YT GIP  Y  LLF+++D+LK   + R   +RVI+TS LW+PYKP VFY+E IEC RR LL GV +F  PNTA QIA+TL++AF FVV+SE L PYAS
Sbjct: 1543 SYRGNVFSCALGMFLDFNASGDPNEAACDGCQTPCDDDGC-FEEPPLVPICALAMEHTGSAGGTNNITLLRVDDGFWRATPYAIDVLPCYNANACLAGVTNSSGSCLDGYEGPYCSICSDGYTAGLSFKCSECSDSAGGIILASFLAVVALLVAVAVVSYVVSDKVGEGS--RGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYAS 1982          
BLAST of mRNA_A-nodosum_M_contig818.9.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE)

HSP 1 Score: 473 bits (1218), Expect = 1.410e-150
Identity = 229/442 (51.81%), Postives = 313/442 (70.81%), Query Frame = 1
Query:    4 SFHSNAFSCQRGEFLGYHLS-NSVFEALCNGCKEPCEGCHFERPSVSPFCSKTIENSDSPGGLTTLERVMINPGYWRATPLGKQALPCYNTDACLGGLTGEPDFCLKGYEGPYCAICSDGFSASLGFICKICSNSIGGIFVAIVFVLVLLVALILAVSYLLSTELDRGTQRRACVERLMRCIPMQSVKIVIVTWQIVIQFVSVANVQYPHEYQRFLEGVKLLDFDLGWMLSASCVVDIDFHDRLFFATIGPIVVILLLAMTYYIAARRDHRSEGAVQNLQHKHLSAVLLLTFFVYSNVSSMLFQTFACDHLEDGELYLRADYRIECDSATHEKLQAYAAIMIIMYTFGIPVFYATLLFKNQDILKADESSRNNCSRVITTSSLWRPYKPRVFYFEAIECIRRALLVGVTLFFNPNTASQIAVTLILAFTFVVISESLDPYAS 1326
            SF  N F+C    FL +  S +  FEA+C+GC+  C+GC F+     P CS  +++S SPGG  TLE ++I+PGYWRAT   K+ LPCYN DACLGG+TG   +CL+ YEGPYC+ICS+G++++LG+ C  C +  GGI  A+   +V +   ++ + Y++S E   G +R    ERL   +P+QSVKIVIV+WQIV QF S ANV YP  YQ+F++G+K+  FDLGW+LS  CV+D+DFH RL  ATIGPI  +LLLA TY  A R +  +   ++ +  KH+   LLLTF VYS+VSS LF+TFACD LEDG  YLR DYRIECDS+ H+  Q YA  MI++Y  GIPV Y+ LLF+++++LK D++ RN+ +RV +TS LW+PYKP VFY+E IEC RR LL G+ +F  PNTA+Q+A+TL++AF F ++SE++ PY+S
Sbjct:  963 SFTGNGFTCGPDLFLEFDTSGDGTFEAVCDGCRVACDGCSFDEQPAVPTCSDVMDHSTSPGGNVTLETLLIDPGYWRATSSSKKILPCYNADACLGGVTGTAGYCLESYEGPYCSICSNGYASNLGYSCSKCFSRSGGIAFAVGLAVVAVFVAVVVIRYIMSGE--AGERRIYVFERLGWYVPLQSVKIVIVSWQIVTQFASAANVVYPGVYQQFIDGLKVFGFDLGWLLSVGCVLDMDFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGN-YLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVFIYPNTAAQLAITLMMAFFFALLSEAVSPYSS 1401          
BLAST of mRNA_A-nodosum_M_contig818.9.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI)

HSP 1 Score: 469 bits (1208), Expect = 4.330e-150
Identity = 233/448 (52.01%), Postives = 312/448 (69.64%), Query Frame = 1
Query:    4 SFHSNAFSCQRGEFLGYHLSNSVFEALCNGCKEPCEGCHFERPSVSPFCSKTIENSDSPGGLTTLERVMINPGYWRATPLGKQALPCYNTDACLGGLTGEPDFCLKGYEGPYCAICSDGFSASLGFICKICSNSIGGIFVAIVFVLVLLVALILAVSYLLSTELDRGTQRRACVERLMRCIPMQSVKIVIVTWQIVIQFVSVANVQYPHEYQRFLEGVKLLDFDLGWMLSASCVVDIDFHDRLFFATIGPIVVILLLAMTYYIAARRDHR--SEGAVQNLQHKHLSAVLLLTFFVYSNVSSMLFQTFACDHLEDGELYLRADYRIECDSATHEKLQAYAAIMIIMYTFGIPVFYATLLFKNQDILKADESSRNNC-----SRVITTSSLWRPYKPRVFYFEAIECIRRALLVGVTLFFNPNTASQIAVTLILAFTFVVISESLDPYAS 1326
            +F  N F C  G FL Y+ S+ +FE +C+GC+       F  P + P C   +E+S SP G  TLE + I  GYWRAT   ++ L CY+ +ACLGG+TG   +CL+GY+GPYCA+CS GFSA  GF C+ CS+S GGI +A+   +  + A ++ VSY+ S +  R  + +  VER+   IP+QSVKIV+V WQ+V QF  VAN+ YP  YQ FL+G+KL +FDLGW+LSA CV D+DFHDRL  +TIGPI+ +++LA TY  AA R HR  ++  +QN+  KH+  VLLL+FFVYS+VSS LF+TFAC+ L DG+ YLRADYRIECDS+ H+  + YA IM+++YT GIP  Y  LL++++D LK     R+ C     SRV +TS LW+PY+P VFY+E IEC RR LL GV +F  PN+ +QIA+TL++AF FV+ISESL PYAS
Sbjct:  897 NFSGNGFDCPTGMFLAYNESDDLFETVCDGCQTXXXXXAFAEPLLVPMCRDLLEHSTSPDGKLTLEALSIQRGYWRATTTSEEVLACYHPEACLGGVTGTAGYCLEGYQGPYCAVCSHGFSAQFGFTCRECSDSAGGIVLAVALAVAGIFAAVVVVSYVTSGK--RNGRGQGIVERVALYIPLQSVKIVVVAWQVVTQFTVVANITYPDVYQTFLDGLKLFNFDLGWILSAGCVTDVDFHDRLLMSTIGPIIAVMVLACTY-AAATRIHRGATDTTLQNVWDKHVLVVLLLSFFVYSSVSSTLFRTFACETLGDGKNYLRADYRIECDSSRHKGFEVYAGIMMLVYTVGIPGLYGFLLYRDRDFLK----ERDTCQEPPPSRVTSTSDLWKPYRPSVFYYEVIECGRRVLLAGVVVFIYPNSGAQIAITLVIAFVFVLISESLSPYAS 1337          
BLAST of mRNA_A-nodosum_M_contig818.9.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 462 bits (1189), Expect = 5.710e-148
Identity = 222/441 (50.34%), Postives = 297/441 (67.35%), Query Frame = 1
Query:    4 SFHSNAFSCQRGEFLGYHLSNSVFEALCNGCKEPCEGCHFERPSVSPFCSKTIENSDSPGGLTTLERVMINPGYWRATPLGKQALPCYNTDACLGGLTGEPDFCLKGYEGPYCAICSDGFSASLGFICKICSNSIGGIFVAIVFVLVLLVALILAVSYLLSTELDRGTQRRACVERLMRCIPMQSVKIVIVTWQIVIQFVSVANVQYPHEYQRFLEGVKLLDFDLGWMLSASCVVDIDFHDRLFFATIGPIVVILLLAMTYYIAARRDHRSEGAVQNLQHKHLSAVLLLTFFVYSNVSSMLFQTFACDHLEDGELYLRADYRIECDSATHEKLQAYAAIMIIMYTFGIPVFYATLLFKNQDILKADESSRNNCSRVITTSSLWRPYKPRVFYFEAIECIRRALLVGVTLFFNPNTASQIAVTLILAFTFVVISESLDPYAS 1326
            +F  N F C  G +L Y+ S + +EA C GC+  C+GC FE P V P C+  +E+  S GG  TLE + +  GYWRA+P  ++   CYN+DACLGG+TG   +CLKGYEGPYCA+CSDG++  L F C  CS   G I +A V  +V+L       SY +S  +  G  R   V RL + IP+QSVKIVIV WQI+ QF SVANV YP  Y+RFL+G+ + +FDL W+LSA C+ DIDFHDRL  +T+ P++ +L LA TY  A   +     ++Q + +KH+S VLLLTF +YS+VS+ LF+ F C+ LEDG  YLRADY I+CDS+ H+  Q YA  M+++Y  GIP  YA LLF+++ +LK   + R   +R  +TS LW+PYKP VFY+E IEC RR LL GV +F  PNTA+QIA+TL++AF FV++SE L P+AS
Sbjct:  734 TFSGNVFDCDPGMYLDYNASGNPYEAACGGCETACDGCFFE-PPVPPTCTDVMEHITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRV--GDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFAS 1171          
BLAST of mRNA_A-nodosum_M_contig818.9.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 451 bits (1161), Expect = 5.830e-146
Identity = 222/440 (50.45%), Postives = 299/440 (67.95%), Query Frame = 1
Query:    4 SFHSNAFSCQRGEFLGYHLSNSVFEALCNGCKEPCEGCHFERPSVSPFCSKTIENSDSPGGLTTLERVMINPGYWRATPLGKQALPCYNTDACLGGLTGEPDFCLKGYEGPYCAICSDGFSASLGFICKICSNSIGGIFVAIVFVLVLLVALILAVSYLLSTELDRGTQRRACVERLMRCIPMQSVKIVIVTWQIVIQFVSVANVQYPHEYQRFLEGVKLLDFDLGWMLSASCVVDIDFHDRLFFATIGPIVVILLLAMTYYIAARRDHRSEGAVQNLQHKHLSAVLLLTFFVYSNVSSMLFQTFACDHLEDGELYLRADYRIECDSATHEKLQAYAAIMIIMYTFGIPVFYATLLFKNQDILKADESSRNNCSRVITTSSLWRPYKPRVFYFEAIECIRRALLVGVTLFFNPNTASQIAVTLILAFTFVVISESLDPYA 1323
            +F  N F+C    FL Y   +++ EA C+GC+  C+GC   +P V P CS  I +S S GGL TLE + I+PGYWRAT    + L CYN DAC+GG+TG  ++C++GYEGPYCAICSD +SA LGF C  C N  GGI +A    ++ L  ++  VSY+ +  +D  T   A    L R +P+Q++KI++V WQIV QF S ANV YP  YQRFL G+ + +FD+ W+LSA CV+D+DFHDRL  +TIGPI+ +L LA TY   +R +  +   +Q +  +H+S VLLL F VYS VSS++FQTFACD LE G  YLRADYRIECDS+ H+  + YA  MI++Y  GIP FY  LL +++D+L+ D   R +  RV + S+LW+PY+P V+Y+E IEC RR LL G+ +F  PNTA+QIA+TLI+   F V+SE+L PYA
Sbjct:  497 TFSGNVFNCAPDTFLNYTSGDALDEA-CSGCQTTCDGC--VQPPVVPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYV-AWRVDPNTGC-AMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYA 931          
BLAST of mRNA_A-nodosum_M_contig818.9.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 459 bits (1180), Expect = 6.390e-145
Identity = 229/442 (51.81%), Postives = 303/442 (68.55%), Query Frame = 1
Query:    4 SFHSNAFSCQRGEFLGYHLSNSVFEALCNGCKEPCEGCHFERPSVSPFCSKTIENSDSPGGLTTLERVMINPGYWRATPLGKQALPCYNTDACLGGLTGEPDFCLKGYEGPYCAICSDGFSASLGFICKICS-NSIGGIFVAIVFVLVLLVALILAVSYLLSTELDRGTQRRACVERLMRCIPMQSVKIVIVTWQIVIQFVSVANVQYPHEYQRFLEGVKLLDFDLGWMLSASCVVDIDFHDRLFFATIGPIVVILLLAMTYYIAARRDHRSEGAVQNLQHKHLSAVLLLTFFVYSNVSSMLFQTFACDHLEDGELYLRADYRIECDSATHEKLQAYAAIMIIMYTFGIPVFYATLLFKNQDILKADESSRNNCSRVITTSSLWRPYKPRVFYFEAIECIRRALLVGVTLFFNPNTASQIAVTLILAFTFVVISESLDPYAS 1326
            SF  N F C  G F     S   FEA+CNGC+  C+GC F   S++P C++ +++S S GG  TL+ + I+ G+WRA+    + L CY+ DACLGG+TG   +C +GYEGPYC ICSDG++  L F C  CS NS GGI VA+V  L+++   +  VSY+ S E+  G ++   VE + R IP+QS+KIVIV+WQI+ QF SVANV YP  YQ  L+ + + +FDL W+LSA CVVD++FH RL  +TI PIV +LLLA TY  AAR +      +  + +KH++ VLLLTFFVYS+VSS LF+ FACD L+  + YLRADY IEC+S+ H  +Q YA  MI++YT GIP  YA LLFK++D+LK ++  R    RV + S+LW PYKP VFY+E IEC RR LL GV +F  PNTA+QIAVTL++AF F ++SE L PYAS
Sbjct:  987 SFDGNGFDCPAGTFRNVTGSVDHFEAICNGCETTCDGCVFAEGSLAPICTEVMDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMG-RKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYAS 1427          
BLAST of mRNA_A-nodosum_M_contig818.9.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI)

HSP 1 Score: 447 bits (1150), Expect = 5.550e-140
Identity = 222/444 (50.00%), Postives = 298/444 (67.12%), Query Frame = 1
Query:    7 FHSNAFSCQRGEFLGY-HLSNSVFEALCNGCKEPCEGCHFERPSVSPFCSKTIENSDSPGGLTTLERVMINPGYWRATPLGKQALPCYNTDACLGGLTGEPDFCLKGYEGPYCAICSDGFSASLGFICKIC-SNSIGGIFVAIVFVLVLLVALILAVSYLLSTELDRGTQRRAC--VERLMRCIPMQSVKIVIVTWQIVIQFVSVANVQYPHEYQRFLEGVKLLDFDLGWMLSASCVVDIDFHDRLFFATIGPIVVILLLAMTYYIAARRDHRSEGAVQNLQHKHLSAVLLLTFFVYSNVSSMLFQTFACDHLEDGELYLRADYRIECDSATHEKLQAYAAIMIIMYTFGIPVFYATLLFKNQDILKADESSRNNCSRVITTSSLWRPYKPRVFYFEAIECIRRALLVGVTLFFNPNTASQIAVTLILAFTFVVISESLDPYAS 1326
            F  N F C+   +L +   S+  FE +C+GC+  CEGC F+   + P C++ +E++ S GG  TLE + I+ GYWRAT   +  L CY+ +ACLGG+T    +CL+GYEGPYC++CS+G+S  LGF+C  C   + GGI + +V  +   + L    SY+ S E   GT    C  +ER+ R IP+QSVKIVI  WQI+ QF S+ANV YP  Y+ FL  + + +FDLGW LS SC +D+DFHDRL  +TI PI  +L LA TY+ A     R    +  +QHKH S VLLLTFFVYS+VSS+LF++FAC+ L D ++YLR+DYRIECDS+ H+  Q YA  MI++YT GIP  YA LLF+++D+LK D S R +  RV + + LW PY    FY+E IEC RR LL GV +F  PNTA+QIAVTL++AF FVV+SE+L+PY S
Sbjct: 1098 FSGNRFDCRSSMYLDFIQQSDDPFEVMCSGCEVTCEGCVFDEGLLVPACTEVMEHATSDGGNITLEALSIDSGYWRATESSEDVLACYHAEACLGGVTATSGYCLEGYEGPYCSVCSNGYSEQLGFVCSKCPEKNTGGIVILVVLAVGTTIVLAAIYSYVTSGEDGMGT---GCGWIERVTRYIPLQSVKIVIAAWQILTQFTSIANVTYPDVYEDFLGVLDMFNFDLGWALSVSCTIDMDFHDRLLVSTISPIAALLFLACTYFRAWSLYRRKPDTLGAVQHKHASMVLLLTFFVYSSVSSILFRSFACEELADRKIYLRSDYRIECDSSKHKGFQVYAVFMILVYTVGIPALYAGLLFRDRDLLKQDTSKRRDPPRVTSIADLWEPYNRWAFYYEVIECGRRVLLAGVVVFIYPNTAAQIAVTLMIAFAFVVVSEALNPYKS 1538          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig818.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2Z8_ECTSI4.260e-16453.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LSC0_ECTSI2.250e-16155.43Polymorphic Outer membrane protein G/I family n=3 ... [more]
D7G2X5_ECTSI1.250e-15251.58Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
D7G5Y7_ECTSI4.200e-15153.05Polymorphic Outer membrane protein G/I family n=1 ... [more]
A0A6H5K7Z1_9PHAE1.410e-15051.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIY0_ECTSI4.330e-15052.01Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G301_ECTSI5.710e-14850.34Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FHH1_ECTSI5.830e-14650.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0E9_9PHAE6.390e-14551.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FTI5_ECTSI5.550e-14050.00Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig818contigA-nodosum_M_contig818:158191..160624 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LSC0
PFAMsBeta_helix,Chlam_PMP
Model size1329
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue3.69e-162
EggNOG OGs2BFIX@1|root,2S176@2759|Eukaryota
Cds size1326
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870137.2663052-CDS-A-nodosum_M_contig818:158190..1582501680870137.2663052-CDS-A-nodosum_M_contig818:158190..158250Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig818 158191..158250 +
1680870137.2800505-CDS-A-nodosum_M_contig818:158572..1588491680870137.2800505-CDS-A-nodosum_M_contig818:158572..158849Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig818 158573..158849 +
1680870137.289597-CDS-A-nodosum_M_contig818:159360..1596201680870137.289597-CDS-A-nodosum_M_contig818:159360..159620Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig818 159361..159620 +
1680870137.303769-CDS-A-nodosum_M_contig818:159893..1606221680870137.303769-CDS-A-nodosum_M_contig818:159893..160622Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig818 159894..160622 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig818.9.1prot_A-nodosum_M_contig818.9.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig818 158191..160622 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig818.9.1

>prot_A-nodosum_M_contig818.9.1 ID=prot_A-nodosum_M_contig818.9.1|Name=mRNA_A-nodosum_M_contig818.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=442bp
CSFHSNAFSCQRGEFLGYHLSNSVFEALCNGCKEPCEGCHFERPSVSPFC
SKTIENSDSPGGLTTLERVMINPGYWRATPLGKQALPCYNTDACLGGLTG
EPDFCLKGYEGPYCAICSDGFSASLGFICKICSNSIGGIFVAIVFVLVLL
VALILAVSYLLSTELDRGTQRRACVERLMRCIPMQSVKIVIVTWQIVIQF
VSVANVQYPHEYQRFLEGVKLLDFDLGWMLSASCVVDIDFHDRLFFATIG
PIVVILLLAMTYYIAARRDHRSEGAVQNLQHKHLSAVLLLTFFVYSNVSS
MLFQTFACDHLEDGELYLRADYRIECDSATHEKLQAYAAIMIIMYTFGIP
VFYATLLFKNQDILKADESSRNNCSRVITTSSLWRPYKPRVFYFEAIECI
RRALLVGVTLFFNPNTASQIAVTLILAFTFVVISESLDPYAS
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mRNA from alignment at A-nodosum_M_contig818:158191..160624+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig818.9.1 ID=mRNA_A-nodosum_M_contig818.9.1|Name=mRNA_A-nodosum_M_contig818.9.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2434bp|location=Sequence derived from alignment at A-nodosum_M_contig818:158191..160624+ (Ascophyllum nodosum dioecious)
TGCTCCTTCCACAGCAACGCTTTCAGCTGCCAACGAGGCGAGTTCCTCGG ATATCATTTGGTGAGTCGGATATTGAAGTAGCTACTGTCGTGGCCTTCGA CTTTGACCTGTCGATATCATAATGGATGATACTTCATACTTCTGTGAAGT AAATGGTCCTTTGTCGGTAACAACTTGCGCTGTAAATGGATCATGTGGTT TGACTACTAAGGGTAGTGTTTAGTCGTATGTTTGAATACTGTCTACGTAT ATGAAGCTACTTTATCTATAGGGTTTATTTTGTATTTCTGAATTGAATGA GAAAAAAACAAGAAAACTTAACGAAATGAAGAAATTTATCGGACACTGAC ACTTCTTTGTCATTTTCGTTTGTCTGCTGTAGTCTAACAGTGTATTCGAG GCTCTATGTAACGGATGCAAAGAACCATGCGAGGGATGCCATTTTGAGCG ACCGTCGGTGAGTCCATTTTGCTCCAAGACGATTGAAAACTCCGACAGCC CTGGAGGCTTGACAACGCTTGAGCGGGTGATGATCAACCCAGGCTACTGG CGAGCCACTCCTTTGGGAAAGCAAGCGTTGCCGTGCTATAATACCGACGC CTGCCTCGGAGGACTGACGGGAGAACCGGATTTCTGCCTCAAAGGCTATG AAGGGCCGTGTAAGTAAGCCACATTATTATTGGTGCACATCATTCAACTA AATCAACCCAATAAATTTGGTTGCACTCGACGAAGTTTCTAGCGTGAGCG GCGCTGAGACATTTGGAAACCCTAGCTCTAACTTTAGATCCTATGAAACA TTCTGTAATAAATTTACATCCAGACTTACTGAGGTGTGAGCTAAAGTTAG TCGCAATATATTTTTCGAAAGTATAACTATCAGAACACGGAGTAGCTCTC TGAGGCCTGCATTGTTCCTCTTTTTTACGGATTCGCGAAATCACCAATCT AAACCCGTCAACATTGAACTACTCCTGTATTCGAGTTCGCTTTAAAAAGC GCGTCGACATTATCCCTGGTTGGGAAAGACTGGAGCTGCTGGAACGTCCG CATCTCTTGAGAACTAAGTGACGTTTTTTATGCGATCCCTAGCAATGCCA CTTGAATCGCTGGGTACTCGTCCTTTCGTAAACATCCGCCATTACCGAAA TTGCGCCGTTAATCGAGCAGATTGCGCCATCTGTAGCGATGGTTTCTCGG CGAGCTTAGGTTTCATCTGCAAAATATGCTCCAACAGCATCGGCGGTATT TTTGTGGCGATCGTCTTCGTGTTAGTGCTCTTAGTTGCATTGATATTGGC AGTGTCGTACCTGCTTTCAACGGAGCTGGATCGTGGAACACAAAGAAGAG CGTGCGTCGAGCGCCTGATGCGATGCATTCCAATGCAATCCGTCAAGATT GTTATCGTGACATGGCAGATTGTGATACAGGTACGATGGAGTGGCTTAGT CAATCTTATACCACTGTGTCGAATCAGATAAATGATGCTTTCCGAAGGCA GGAAGTGAAAAAAAAACACGCGATTATTCTGTTTAATTTATTATATTATC TACCTTCAGACAAGGGGCAGATCGATGATGAAAGACACAAAGGAAACCAA CAACGCATTATTAATAGCAATTGCAACCAGCACAGGAAGCATTTGGCAAC TAAAAACCGGCCTTATCTCATTTTTACTGTGTCCTATCCATCCCGTCGTC CAGTTCGTGTCCGTGGCAAACGTTCAGTACCCCCACGAGTACCAGCGGTT TCTCGAAGGTGTTAAACTACTCGACTTCGACCTCGGCTGGATGCTCTCTG CCTCGTGCGTGGTTGATATCGACTTCCACGACCGGCTATTTTTTGCCACT ATCGGGCCTATAGTCGTCATTTTGTTGCTAGCAATGACGTACTACATCGC GGCGCGTAGGGACCACCGATCTGAAGGGGCAGTTCAAAACCTTCAACACA AACACCTTTCCGCGGTGCTACTGCTGACATTCTTCGTATACTCCAACGTC AGCTCCATGCTTTTCCAGACATTCGCATGCGACCACCTCGAGGATGGTGA ACTATACCTCCGGGCCGATTACCGTATCGAATGCGACTCCGCGACGCACG AGAAGCTCCAAGCATACGCTGCTATCATGATAATCATGTATACATTCGGC ATTCCGGTCTTCTACGCCACGCTCTTGTTCAAGAACCAAGACATTCTTAA AGCCGACGAATCCTCGCGGAACAACTGCTCTCGTGTTATTACAACAAGCA GCTTGTGGAGGCCGTATAAGCCTAGAGTGTTCTACTTCGAGGCAATCGAA TGTATCAGGCGCGCTCTTTTGGTGGGTGTAACATTGTTCTTCAACCCTAA CACGGCGTCCCAGATCGCTGTGACGCTTATACTCGCCTTTACCTTTGTGG TTATATCAGAGAGTCTAGATCCCTACGCTTCGAG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig818:158191..160624+

>mRNA_A-nodosum_M_contig818.9.1 ID=mRNA_A-nodosum_M_contig818.9.1|Name=mRNA_A-nodosum_M_contig818.9.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1326bp|location=Sequence derived from alignment at A-nodosum_M_contig818:158191..160624+ (Ascophyllum nodosum dioecious)
TGCTCCTTCCACAGCAACGCTTTCAGCTGCCAACGAGGCGAGTTCCTCGG
ATATCATTTGTCTAACAGTGTATTCGAGGCTCTATGTAACGGATGCAAAG
AACCATGCGAGGGATGCCATTTTGAGCGACCGTCGGTGAGTCCATTTTGC
TCCAAGACGATTGAAAACTCCGACAGCCCTGGAGGCTTGACAACGCTTGA
GCGGGTGATGATCAACCCAGGCTACTGGCGAGCCACTCCTTTGGGAAAGC
AAGCGTTGCCGTGCTATAATACCGACGCCTGCCTCGGAGGACTGACGGGA
GAACCGGATTTCTGCCTCAAAGGCTATGAAGGGCCGTATTGCGCCATCTG
TAGCGATGGTTTCTCGGCGAGCTTAGGTTTCATCTGCAAAATATGCTCCA
ACAGCATCGGCGGTATTTTTGTGGCGATCGTCTTCGTGTTAGTGCTCTTA
GTTGCATTGATATTGGCAGTGTCGTACCTGCTTTCAACGGAGCTGGATCG
TGGAACACAAAGAAGAGCGTGCGTCGAGCGCCTGATGCGATGCATTCCAA
TGCAATCCGTCAAGATTGTTATCGTGACATGGCAGATTGTGATACAGTTC
GTGTCCGTGGCAAACGTTCAGTACCCCCACGAGTACCAGCGGTTTCTCGA
AGGTGTTAAACTACTCGACTTCGACCTCGGCTGGATGCTCTCTGCCTCGT
GCGTGGTTGATATCGACTTCCACGACCGGCTATTTTTTGCCACTATCGGG
CCTATAGTCGTCATTTTGTTGCTAGCAATGACGTACTACATCGCGGCGCG
TAGGGACCACCGATCTGAAGGGGCAGTTCAAAACCTTCAACACAAACACC
TTTCCGCGGTGCTACTGCTGACATTCTTCGTATACTCCAACGTCAGCTCC
ATGCTTTTCCAGACATTCGCATGCGACCACCTCGAGGATGGTGAACTATA
CCTCCGGGCCGATTACCGTATCGAATGCGACTCCGCGACGCACGAGAAGC
TCCAAGCATACGCTGCTATCATGATAATCATGTATACATTCGGCATTCCG
GTCTTCTACGCCACGCTCTTGTTCAAGAACCAAGACATTCTTAAAGCCGA
CGAATCCTCGCGGAACAACTGCTCTCGTGTTATTACAACAAGCAGCTTGT
GGAGGCCGTATAAGCCTAGAGTGTTCTACTTCGAGGCAATCGAATGTATC
AGGCGCGCTCTTTTGGTGGGTGTAACATTGTTCTTCAACCCTAACACGGC
GTCCCAGATCGCTGTGACGCTTATACTCGCCTTTACCTTTGTGGTTATAT
CAGAGAGTCTAGATCCCTACGCTTCG
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