mRNA_A-nodosum_M_contig8.99.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig8.99.1 vs. uniprot
Match: A0A6H5K768_9PHAE (FPL domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K768_9PHAE) HSP 1 Score: 732 bits (1890), Expect = 7.670e-239 Identity = 552/1101 (50.14%), Postives = 607/1101 (55.13%), Query Frame = 1
Query: 1 SLFYLLSNNHVNDMIMFDFRLGDEEVLSHFASFLKTLSLRLNPNTVQFFLCSPRRR-RHRDDPTGRAENSHSNGREEIRNDGDSEDRRNRGKGGGGXXTRXXXXXXXXXAEATGVRREEXXXXXXXXXXXXXXXXXXXXXE-----------------------ATFPLYTKALEYICHSDFHVRIAALTVVLNIYKQRDPLVRAYLNGPAARSASLPDRLVGALRSQCLVLADRAMSAGM----------MGGASGKMAPAKGGAAMAVVDPGICRDSIAGLQDQVFYLEDVFSSGQGELNAQLCEALLSRLVRPMLLGDWLSGRPGAMFAQVALCALAQLFIVVTYPPLVRLLVLETLASE----------------------------------------------GDGSYPSLLALLQGDREELCLGALVVIQALAQNRVVRVDLGLAHD--------FDDXXXXXAGGISAFDRSETLG--DEGVEASEA-----CPAAPGEGNRCSRAGNIEMRPLGPEILGSTVDALCRMLVP----------GDFSSLSDAAAVAKAG----------------------------------------------------PRRHHLVLRLCGKVLASLAPPPSTSPDQDFGNPNVNMNAHVNLRQSAATAATGALPTIDEQRRTGGMEEGDGRGNLALDDPEAKGSASFARREAAAASDGMALRKASGQRETVLRRIGEAHSAAAAMVLRGLGGAEGASCVVVFEEEIREWSKRTDLDGAITNLPKMSSLILRWSLDNTSLSQRHQSADDSQPPLGASQD--ARVEESEVMRRQRELRGSLQAFLEIRQVRRLLSGKGKIDPWVLRIAGLGPEAEEEPREGGSLDLGGRECLACSIPNPAPRLPAAAAGEDDRAGKVRKRRNGGAAALSVTAGAGRRGRSELYLVLDAKAFLLATPDRHRLSNGEVRSAAPLIHLAVAPDPADETRLHIRALSDRPVALMRHVTPPRLLKTTTSPGKPGAVSASGSQDKKAXXXXXXXXXXXXXXXXXXAGSMCDKQAWACELVFENARSCRLARKHMEGRRLRLRSEKMKLITDLLEACVQG 2826
SLFYLLSNNHVNDMIMFDFRL DEEVLSHFASFLKTLSLRLN +TVQFFL PRR+ R + P XX XXXXXXXXX XXXXXXXXXXXXXXXXXXXXX ++FPLYT+ALEYICH DFHVRIAALTVVLNIY QRDPLVRAYLN PAARSASLPDRLVGALRSQCLVLAD AM+AG+ VDP ICRDSIAGLQDQVFYLEDVF+SGQ ELNA+LCE+LL RLVRPMLLGDWLSGR GAMF QVALCALAQLFIVVT+PPLVRLLVLETL SE G G P LLALLQGDREELCLGALVV+QALAQN+VVR DLGL D + AGG A D G +EG + + A A ++ RPLG E+L + VDALC ML P G S + A V G PRRHHLVLRLCGKVLASLAPP +P G A + R G +P + E R + + A P G+ A A G+R+ +LRRIG+AH+AAAA VLRG+G AEGA+ +V FEEEIREW KR LDGAITNLPKMSSLILRWSLDN+ SQR +A PP + A + RQRELR SLQAFLE+RQV RLLSG+G+ DP VL IAGLGP+A E P E GSLDLGGRECLACS P L + +GRRGRSE+YLVLD KAFLLATPDR+RL NGE++S+APL+HLA A DPAD+ RL IRALS PVALMR V PR S A AGSMCD QAWACEL FEN RSCRLARKHME RRL LRSEK K ITDLLEACVQG
Sbjct: 374 SLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNQHTVQFFLRGPRRKSRAQPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSFPLYTRALEYICHGDFHVRIAALTVVLNIYNQRDPLVRAYLNSPAARSASLPDRLVGALRSQCLVLADSAMAAGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDPTICRDSIAGLQDQVFYLEDVFASGQRELNAELCESLLGRLVRPMLLGDWLSGRSGAMFPQVALCALAQLFIVVTHPPLVRLLVLETLGSEATQELRPVGAVAXXXXXXXXXXXXXXXTAEVDNIGAAAGGEERAGSGVGRAPPLLALLQGDREELCLGALVVLQALAQNQVVRTDLGLTQDTAYNSAQYHEGLPDAAAGGTGAADGQPNGGYAEEGGQQTAAPXXXXXXXXXXXXXXXXAAADLSARPLGMEMLDAAVDALCCMLAPSTATQAVRGEGAGESGEETAGVVAVGTAAGAKXXXXXXALESGGEGGVHPKGGREEAAGSERGHESTVPVPPTPFLPRPRRHHLVLRLCGKVLASLAPPLPPAPLSSGGADGDPATATPSPR--------GEMPPLPEPRTPSASGDTEAAAGTAAGMPVNSGADGGEGGSAVARRKXXXXXXXXGRRDAMLRRIGDAHAAAAAAVLRGMGAAEGAA-IVAFEEEIREWLKRVGLDGAITNLPKMSSLILRWSLDNSPPSQRVPAAPPRPPPSSPTSQGCAEADAGSGRARQRELRSSLQAFLEVRQVLRLLSGRGEADPSVLSIAGLGPQAAEHPWEDGSLDLGGRECLACSFSEP---LEGGSXXXXXXXXXXXXXXXXXXXXXXXXXXSGRRGRSEMYLVLDDKAFLLATPDRNRLMNGEIKSSAPLLHLAAAVDPADDKRLLIRALSHSPVALMRPVAAPRASTPXXXXXXXXXXXXXXSSSNVATTEGAVSGASVESSGGGDAGSMCDMQAWACELAFENERSCRLARKHMEDRRLWLRSEKTKCITDLLEACVQG 1462
BLAST of mRNA_A-nodosum_M_contig8.99.1 vs. uniprot
Match: D7FXA7_ECTSI (FPL domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA7_ECTSI) HSP 1 Score: 676 bits (1743), Expect = 1.370e-222 Identity = 544/1077 (50.51%), Postives = 596/1077 (55.34%), Query Frame = 1
Query: 1 SLFYLLSNNHVNDMIMFDFRLGDEEVLSHFASFLKTLSLRLNPNTVQFFLCSPRRR-RHRDDPTGRAENSHSN--------------------------------GREEIRNDGDSEDRRNRGKGGGGXXTRXXXXXXXXXAEATGVRREEXXXXXXXXXXXXXXXXXXXXXE-ATFPLYTKALEYICHSDFHVRIAALTVVLNIYKQRDPLVRAYLNGPAARSASLPDRLVGALRSQCLVLADRAMSAGMMGGASGKM--------APAKGGAAMAVVDPGICRDSIAGLQDQVFYLEDVFSSGQGELNAQLCEALLSRLVRPMLLGDWLSGRPGAMFAQVALCALAQLFIVVTYPPLVRLLVLETLASEGDGSYPSLLALLQGDREELCLGALVVIQALAQNRVVRVDLGL--------AHDFDDXXXXXAGGISAFDRSETLGDEGVEASEACPAAPGEGNRC-----------SRAGNIEMRPLGPEILGSTVDALCRMLVP----------GDFSSLSDAAAVAKAG----------------------------------------------------PRRHHLVLRLCGKVLASLAPPPSTSPDQDFGNPNVNMNAHVNLRQSAATAATGALPTIDEQRRTGGMEEGDGRG-----NLALDDPEAKGSASFARREAAAASDGMALRKASGQRETVLRRIGEAHSAAAAMVLRGLGGAEGASCVVVFEEEIREWSKRTDLDGAITNLPKMSSLILRWSLDNTSLSQRHQSADDSQPPLGA------SQD-ARVEESEVMRRQRELRGSLQAFLEIRQVRRLLSGKGKIDPWVLRIAGLGPEAEEEPREGGSLDLGGRECLACSIPNPAPRLPAAAAGEDDRAGKVRKRRNGGAAALSVTAGAGRRGRSELYLVLDAKAFLLATPDRHRLSNGEVRSAAPLIHLAVAPDPADETRLHIRALSDRPVALMRHVTPPRLLKTTTSPGKPGAVSASGSQDKKAXXXXXXXXXXXXXXXXXXAGSMCDKQAWACELVFENARSCRLARKHMEGRRLRLRSEKMKLITDLLEACVQG 2826
SLFYLLSNNHVNDMIMFDFRL DEEVLSHFASFLKTLSLRLN +TVQFFL PRR+ R + P G ++ N G G XX R XXX G XXXXXXXXXXXXXXXXXXXXX ++FPLYT+ALEYICH DFH+RIAALTVVLNIY QRDPLVRAYLN PAARSASLPDRLVGALRSQCLVLAD AM+AG+ GG APA AA A VDP ICRDSIAGLQDQVFYLEDVF+SGQ ELNA+LCE+LL RLVRPMLLGDWLSGR GAMF QVALCALAQLFIVVT+PPLVRLLVLETL SE ALAQN+VVR DLGL A D + A G A D G E A GEG + A + RPLG E+L + VDALC ML P G S + V G PRRHHLVLRLCGKVLASLAP G + R T +P +GG E+ G N A D E A + +L+RIGEAH+AAAA VLRG+G AEGA+ R + KR LDGAITNLPKMSSLILRWSLDN+ SQR + PP SQ A + RQRELR SLQAFLE+RQV RLLSG+G+ DP VL IAGLGP+AEE P E GSLDLGGRECLACSI + L ++G +GRRGRSE+YLVLD KAFLLATPDR+RL NGE++S+APL+HLA A DPAD+ RL IRALS PVALMR V PR +S G XXX XXXXXXXXXX AGSMCD QAWACEL FEN RSCRLARKHMEGRRLRLRSEK K ITDLLEACVQG
Sbjct: 8 SLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNQDTVQFFLRGPRRKSRAQPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRDLEN----------GAFSGXXXARDGAPQKXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSFPLYTRALEYICHGDFHIRIAALTVVLNIYNQRDPLVRAYLNSPAARSASLPDRLVGALRSQCLVLADSAMAAGVGGGXXXXXXXXXXXEGAPA---AAAAAVDPTICRDSIAGLQDQVFYLEDVFASGQRELNAELCESLLGRLVRPMLLGDWLSGRSGAMFPQVALCALAQLFIVVTHPPLVRLLVLETLGSE----------------------------ALAQNQVVRTDLGLTQDAAEDSAQDHEGLPGAAAAGTGAADGQPN---GGCAEEEKQQTAAGEGXXXXXXXXXXXXXPAPAVDPSARPLGMEMLDAAVDALCCMLAPSTATQAVGGEGAGESGEETTGVVAVGTAAGTKEGAPSSALGSGGGAGVHPEGGRKEAAGSERGHESTVPVPPTPFLPRPRRHHLVLRLCGKVLASLAPXXXXXXXXXXGADGDPATVTPSPR-----GETPPVPEPGTPSASGGTEDAAGTAAGMPVNSAADGEEGA--------SAXXXXXXXXXXXXXXXXDAMLKRIGEAHAAAAAAVLRGMGAAEGAAP--------RRFRKRR-LDGAITNLPKMSSLILRWSLDNSPPSQRVPA-----PPXXXXXXXXXSQGCAEADGGNGRARQRELRSSLQAFLEVRQVLRLLSGRGEADPSVLSIAGLGPQAEEHPWEDGSLDLGGRECLACSI---SESLEGGSSGRXXXXXXXXXXXXXXXXXXXXXXXSGRRGRSEMYLVLDDKAFLLATPDRNRLMNGEIKSSAPLLHLAAAVDPADDKRLLIRALSHSPVALMRPVAAPRASTPRSSTGXXXXXXXX--XXXXXXXXGAVSXXXXXXXXXXDAGSMCDMQAWACELTFENERSCRLARKHMEGRRLRLRSEKTKCITDLLEACVQG 1008
BLAST of mRNA_A-nodosum_M_contig8.99.1 vs. uniprot
Match: A0A7R9AV84_TIMSH (Hypothetical protein n=1 Tax=Timema shepardi TaxID=629360 RepID=A0A7R9AV84_TIMSH) HSP 1 Score: 84.0 bits (206), Expect = 1.430e-12 Identity = 90/331 (27.19%), Postives = 141/331 (42.60%), Query Frame = 1
Query: 1 SLFYLLSNNHVNDMIMFDFRLGDEEVLSHFASFLKTLSLRLNPNTVQFFLCSPRRRRHRDDPTGRAENSHSNGREEIRNDGDSEDRRNRGKGGGGXXTRXXXXXXXXXAEATGVRREEXXXXXXXXXXXXXXXXXXXXXEAT--FPLYTKALEYICHSDFHVRIAALTVVLNIYKQRDPLVRAYLNGPAARSASLPDRLVGALRSQCLVLADRAMSAGMMGGASGKMAPAKGGAAMAVVDPGICRDSIAGLQDQVFYLEDVFSSGQGELNAQLCEALLSRLVRPMLLGDWLSGRPGAMFAQ--------VALCALAQLFIVVTYPPLVRLL 963
SL+YLLSNNHVN +I+ F DEEV++++ SFLKTLSL+LN +T+ FF E+ N S + G GG TR TG R + + T FPLYT+A+++ H + VRIA T+ LN+Y+ D + ++ A A LV + + L L D + + +++ D +A D + YL D+ +LN L + LL++L+ P+ + R + V+L L+Q+F+++T+ PLVR+L
Sbjct: 111 SLYYLLSNNHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNAHTIHFFY------------------------NEVGNRSSSRE----GCGG----TRLGTWD-------TGSRSNQNTYPCVSHRCSGLSVMPLLCWQHTNDFPLYTEAIQFFNHPESMVRIAVRTLTLNVYRVEDRSMLQFIRDKTA--APYFSNLVWFIGNHVLEL-DSCVRNDADHQSQNRLS-----------------DLVAEHLDHLHYLNDILCLDISDLNQVLTDHLLNKLLIPLYVYSLTKRRRDSQLEDAKPHVSSVVSLFLLSQVFLIITHEPLVRVL 382
BLAST of mRNA_A-nodosum_M_contig8.99.1 vs. uniprot
Match: A0A8J2NY37_9HEXA (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2NY37_9HEXA) HSP 1 Score: 80.5 bits (197), Expect = 1.640e-11 Identity = 86/327 (26.30%), Postives = 132/327 (40.37%), Query Frame = 1
Query: 1 SLFYLLSNNHVNDMIMFDFRLGDEEVLSHFASFLKTLSLRLNPNTVQFFLCSPRRRRHRDDPTGRAENSHSNGREEIRNDGDSEDRRNRGKGGGGXXTRXXXXXXXXXAEATGVRREEXXXXXXXXXXXXXXXXXXXXXEATFPLYTKALEYICHSDFHVRIAALTVVLNIYKQRDPLVRAYLNGPAARSASLPDRLVGALRSQCLVLADRAMSAGMMGGASGKMAPAKGGAAMAVVDPGICRDSIAGLQDQVFYLEDVFSSGQGELNAQLCEALLSRLVRPMLL-----GDWLSGRPGAMFAQV-ALCALAQLFIVVTYPPLVRLL 963
SL+YLLSNNHVN +I+ F DEEV++++ SFLKTLSL+LN +T+ FF N H+N FPLYT+A+++ +S+ VRIA T+ LN+YK D + ++ A A LV + + L L D + A ++A D +A D + YL D+ +LN L + LL RL+ P+ + + G+ + + AL L+Q+F+++T+PPLVR+L
Sbjct: 111 SLYYLLSNNHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFY-----------------NEHTN---------------------------------------------------------------------DFPLYTEAIKFFNNSESMVRIAVRTLTLNVYKVDDKSMLKFIRDKTA--APYFTNLVWFIGNHVLEL-DVCIRGNSQYEALPRLA-----------------DLVAEHLDHLHYLNDILLLEIDDLNKVLTDHLLHRLLIPLYVTSLDKASAIQGKSSPKVSSILALFLLSQVFLIMTHPPLVRVL 331
BLAST of mRNA_A-nodosum_M_contig8.99.1 vs. uniprot
Match: UPI00143CEF58 (protein CLEC16A homolog isoform X1 n=5 Tax=Belonocnema kinseyi TaxID=2817044 RepID=UPI00143CEF58) HSP 1 Score: 76.3 bits (186), Expect = 3.320e-10 Identity = 85/339 (25.07%), Postives = 132/339 (38.94%), Query Frame = 1
Query: 1 SLFYLLSNNHVNDMIMFDFRLGDEEVLSHFASFLKTLSLRLNPNTVQFFLCSPRRRRHRDDPTGRAENSHSNGREEIRNDGDSEDRRNRGKGGGGXXTRXXXXXXXXXAEATGVRREEXXXXXXXXXXXXXXXXXXXXXEATFPLYTKALEYICHSDFHVRIAALTVVLNIYKQRDPLVRAYLNGPAARSASLPDRLVGALRSQCLVLADRAMSAGMMGGASGKMAPAKGGAAMAVVDPGICRDSIAGLQDQVFYLEDVFSSGQGELNAQLCEALLSRLVRPMLLGDWLSGRPGA--------MFAQVALCALAQLFIVVTYPPLVRLLVLETLASEGD 993
SL+YLLSNNHVN +I+ F DEEV++++ SFLKTLSL+LN +T+ FF N H+N FPLYT+A+++ HS+ VRIA T+ LN+Y+ D + A++ A A LV + + + L D + + +++ D +A D + YL D+ +LN L E LL +L+ P+ + + + V+L L+Q+F++V+Y PLV+ L L S D
Sbjct: 111 SLYYLLSNNHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNAHTIHFFYNEV--------------NEHTN---------------------------------------------------------------------DFPLYTEAIKFFNHSEGMVRIAVRTLTLNVYRVEDTSMLAFIRDKTA--APYFSNLVWFIGNHIIEL-DTCVRNDADHQSQNRLS-----------------DLVAEHLDHLHYLNDILCLNIQDLNKVLSEHLLHKLLVPLYVYSLMKHNNSCKNQDEKKHVSIVVSLFLLSQVFLIVSYGPLVKTLAAVILKSNLD 346
BLAST of mRNA_A-nodosum_M_contig8.99.1 vs. uniprot
Match: A0A6J8EX83_MYTCO (CLEC16A n=2 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8EX83_MYTCO) HSP 1 Score: 75.1 bits (183), Expect = 8.030e-10 Identity = 83/327 (25.38%), Postives = 129/327 (39.45%), Query Frame = 1
Query: 1 SLFYLLSNNHVNDMIMFDFRLGDEEVLSHFASFLKTLSLRLNPNTVQFFLCSPRRRRHRDDPTGRAENSHSNGREEIRNDGDSEDRRNRGKGGGGXXTRXXXXXXXXXAEATGVRREEXXXXXXXXXXXXXXXXXXXXXEATFPLYTKALEYICHSDFHVRIAALTVVLNIYKQRDPLVRAYLNGPAARSASLPDRLVGALRSQCLVLADRAMSAGMMGGASGKMAPAKGGAAMAVVDPGICRDSIAGLQDQVFYLEDVFSSGQGELNAQLCEALLSRLVRPML-----LGDWLSGRPGA---MFAQVALCALAQLFIVVTYPPLVR 957
SL+YLLSNNH+N +I+ F DEEV++++ SFLKTLSL+LN +T+ FF N H+N F LYT+A+++ HS+ VRIA T+ LN++K D + Y+ A A LV + + L + D + + ++A D +A D + YL D+ LN L + L+RL+ P+ + +GR G + + VAL L+Q+F++++Y PLVR
Sbjct: 112 SLYYLLSNNHINSIIVHKFDFSDEEVMAYYISFLKTLSLKLNKHTIHFFY-----------------NEHTN---------------------------------------------------------------------DFALYTEAIKFFNHSESMVRIAVRTITLNVFKVEDKAMLRYIRDRTA--APYFSNLVWFIGNHILNV-DLCVRHDADHQSRNRLA-----------------DLVAEHLDHLHYLNDILCINIDTLNEVLTDQFLNRLLIPLYVYCLTMRKKHNGRQGDKKHISSVVALYLLSQVFLIISYAPLVR 332
BLAST of mRNA_A-nodosum_M_contig8.99.1 vs. uniprot
Match: A0A0G4J4A4_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J4A4_PLABS) HSP 1 Score: 73.6 bits (179), Expect = 1.270e-9 Identity = 33/49 (67.35%), Postives = 43/49 (87.76%), Query Frame = 1
Query: 1 SLFYLLSNNHVNDMIMFDFRLGDEEVLSHFASFLKTLSLRLNPNTVQFF 147
S++YLLSNNH+ND+IM F GDEEV++++ SFLKTLSL+LN NT+QFF
Sbjct: 107 SMYYLLSNNHINDLIMIRFDFGDEEVIAYYISFLKTLSLKLNRNTLQFF 155
BLAST of mRNA_A-nodosum_M_contig8.99.1 vs. uniprot
Match: A0A3P3Y0C0_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y0C0_PLABS) HSP 1 Score: 73.6 bits (179), Expect = 1.990e-9 Identity = 33/49 (67.35%), Postives = 43/49 (87.76%), Query Frame = 1
Query: 1 SLFYLLSNNHVNDMIMFDFRLGDEEVLSHFASFLKTLSLRLNPNTVQFF 147
S++YLLSNNH+ND+IM F GDEEV++++ SFLKTLSL+LN NT+QFF
Sbjct: 88 SMYYLLSNNHINDLIMIRFDFGDEEVIAYYISFLKTLSLKLNRNTLQFF 136
BLAST of mRNA_A-nodosum_M_contig8.99.1 vs. uniprot
Match: K1QR74_CRAGI (Protein CLEC16A n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1QR74_CRAGI) HSP 1 Score: 73.2 bits (178), Expect = 2.290e-9 Identity = 82/328 (25.00%), Postives = 127/328 (38.72%), Query Frame = 1
Query: 1 SLFYLLSNNHVNDMIMFDFRLGDEEVLSHFASFLKTLSLRLNPNTVQFFLCSPRRRRHRDDPTGRAENSHSNGREEIRNDGDSEDRRNRGKGGGGXXTRXXXXXXXXXAEATGVRREEXXXXXXXXXXXXXXXXXXXXXEATFPLYTKALEYICHSDFHVRIAALTVVLNIYKQRDPLVRAYLNGPAARSASLPDRLVGALRSQCLVLADRAMSAGMMGGASGKMAPAKGGAAMAVVDPGICRDSIAGLQDQVFYLEDVFSSGQGELNAQLCEALLSRLVRPMLL---------GDWLSGRPGAMFAQVALCALAQLFIVVTYPPLVR 957
SL+YLLSNNH+N +I+ F DEEV++++ SFLKTLS +LN +T+ FF N H+N F LYT+A+++ HS+ VRIA T+ LN+Y+ D + Y+ A A LV + + L L D + + ++A D +A D + YL D+ LN L + +L+RL+ P+ + D L R + V+L L+Q+F++++Y PLVR
Sbjct: 112 SLYYLLSNNHINSIIVHKFDFSDEEVMAYYISFLKTLSFKLNRHTIHFFY-----------------NEHTN---------------------------------------------------------------------DFALYTEAIKFFNHSEAMVRIAVRTITLNVYRVDDKAMLRYIRNRTA--APYFSNLVWFIGNHILDL-DMCVRNDADHQSRDRLA-----------------DLVAEHLDHLHYLNDILCLNIDALNDVLTDQILNRLLIPLYVYSLTMRKRAADRLGDRKHVS-SVVSLFLLSQVFLIISYAPLVR 332
BLAST of mRNA_A-nodosum_M_contig8.99.1 vs. uniprot
Match: C1E2B3_MICCC (FPL domain-containing protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E2B3_MICCC) HSP 1 Score: 68.2 bits (165), Expect = 2.800e-9 Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 1
Query: 1 SLFYLLSNNHVNDMIMFDFRLGDEEVLSHFASFLKTLSLRLNPNTVQFF 147
SLFYL SNNHVN++I DF DEEV++++ S LKT+SL+LNP TVQFF
Sbjct: 77 SLFYLFSNNHVNELIECDFDFDDEEVMAYYISLLKTISLKLNPATVQFF 125 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8.99.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig8.99.1 >prot_A-nodosum_M_contig8.99.1 ID=prot_A-nodosum_M_contig8.99.1|Name=mRNA_A-nodosum_M_contig8.99.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=933bp MIMFDFRLGDEEVLSHFASFLKTLSLRLNPNTVQFFLCSPRRRRHRDDPTback to top mRNA from alignment at A-nodosum_M_contig8:1486104..1496485- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig8.99.1 ID=mRNA_A-nodosum_M_contig8.99.1|Name=mRNA_A-nodosum_M_contig8.99.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=10382bp|location=Sequence derived from alignment at A-nodosum_M_contig8:1486104..1496485- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig8:1486104..1496485- >mRNA_A-nodosum_M_contig8.99.1 ID=mRNA_A-nodosum_M_contig8.99.1|Name=mRNA_A-nodosum_M_contig8.99.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=2799bp|location=Sequence derived from alignment at A-nodosum_M_contig8:1486104..1496485- (Ascophyllum nodosum dioecious)back to top |