mRNA_A-nodosum_M_contig8.72.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig8.72.1
Unique NamemRNA_A-nodosum_M_contig8.72.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig8.72.1 vs. uniprot
Match: D8LE28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE28_ECTSI)

HSP 1 Score: 415 bits (1067), Expect = 5.120e-136
Identity = 218/336 (64.88%), Postives = 258/336 (76.79%), Query Frame = 3
Query:  348 LLNLARSEGDPFHAITLYKKALEAKPEDTLIIGEAAELLLQIGDTSTAKEVLTRSISLAPEEGPDKYLNMAQLHEGREALEFYHKGLAIMQKQL----GNGDDNNKRQHLKQRLCIAYCSVGELFLTDLCFEEDAEKRCQDALNKSMMYDYGGPEPPHSLANLRLSQGNVEEAAQSAEESFRRMCLCESPPEHEFRVSLAKVLLECSTTNDECSEKALEVLSGLMQEDDENVEVWYLTAVAFNSLRPPDFESARTYLNRADDMLSKIKQAQEEMGENFAYEDQVQLVREQLEVTASAAAERNSGKDRDAG-SEDSSLSRTDMMSGTERSEVEMDCA 1340
            LL  AR  GDPF A+TLY+K LEA+P+DT I+GEAA+L+L  G+ + AKEVL RSI L PEEGPDKYL MAQLHEGREAL  Y KGL +++KQL    G G        L+QR C+AYCSV ELF+TDLCFEEDAE RCQDAL+ S+ YDYGGPEP +++ANLRLSQ   EEAAQSAEE+FRR+ LCE PP+HEFRVSLAKVL+ECS+ N  CS+KAL+VLSGLMQEDDENVE+WYL AVAFNSL+PPD ESAR +LN A +MLSKI+ AQE+MGE FA+EDQVQLV+EQLE TA   ++ +  KD D    EDS  S +      +    EMDCA
Sbjct:   45 LLEQARKAGDPFLAVTLYQKVLEARPDDTSIMGEAADLMLHAGEPAAAKEVLARSILLGPEEGPDKYLYMAQLHEGREALGHYEKGLELLRKQLADGGGAGGTKEAEAALRQRACMAYCSVAELFMTDLCFEEDAETRCQDALDGSIRYDYGGPEPLNAVANLRLSQSRPEEAAQSAEEAFRRLALCEPPPDHEFRVSLAKVLMECSSVNKSCSDKALQVLSGLMQEDDENVELWYLMAVAFNSLQPPDCESARAHLNTAAEMLSKIRTAQEDMGEEFAFEDQVQLVQEQLEATALLESKDDCEKDEDTDMGEDSKPSTSKAADVVKEGPTEMDCA 380          
BLAST of mRNA_A-nodosum_M_contig8.72.1 vs. uniprot
Match: A0A835ZAV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAV8_9STRA)

HSP 1 Score: 231 bits (588), Expect = 5.480e-65
Identity = 148/363 (40.77%), Postives = 203/363 (55.92%), Query Frame = 3
Query:  243 KTNRKKSKHNSRGKTAAREKPSPSSEVPQAEDVADLLNLARSEGDPFHAITLYKKALEAKPEDTLIIGEAAELLLQIGDTSTAKEVLTRSISLAPEEGPDKYLNMAQLHEGREALEFYHKGLAIMQKQLGN----------GDDNNKRQHLKQRLCIAYCSVGELFLTDLCFEEDAEKRCQDALNKSMMYDYGGPEPPHSLANLRLSQGNVEEAAQSAEESFRRMCLCESP--------------PEHEFRVSLAKVLLECSTTNDECSEKALEVLSGLMQEDDENVEVWYLTAVAFNSLRPPDFESARTYLNRADDMLSKIKQ--AQEEMGEN---------FAYEDQVQLVREQLEVTASA 1226
            K  R   +H  +G TAA  + S  +E    ED      L     +P  A+  YK+AL+  P+D  ++ EAA+LLLQ+G    AK +L+RSI +AP+    K+L MAQLHEG EAL+ Y++GL +++  L                     L+Q+L  A C+V EL++TDLCF  DAE  C  AL++++ +D GGPE   ++A+LRLSQG   +A   A+E+ RR+    +               P++ FRVS AKVLLEC+  +  C E AL VL+GLMQEDDE+VE W+L   AF    PPD E AR +L RA +ML KI++   +E    N         F YE QV LVREQL + A A
Sbjct:   15 KARRLDQRHKQQGATAAAAEQSDEAEA-SGEDA-----LVHDSVEPELALKFYKRALDLCPQDPALLDEAADLLLQLGAADDAKALLSRSIEVAPDASAGKWLYMAQLHEGEEALKLYNRGLTLLEAALAQPAAXXXXXXXXSTLTSIPELRQQLSAACCAVAELYMTDLCFAPDAEAACAAALDRALRHDAGGPEAHQAMAHLRLSQGRAADAVPFAKEAARRVGAALAALEGDVMGGGEGGPGPDYGFRVSAAKVLLECADADASCCEDALAVLAGLMQEDDEDVETWFLMGAAFFKQDPPDLELARAHLERAAEMLEKIREHMRKERRSGNRGGGSAQFVFPYEGQVALVREQLALVAEA 371          
BLAST of mRNA_A-nodosum_M_contig8.72.1 vs. uniprot
Match: A0A7S2CWS8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CWS8_9STRA)

HSP 1 Score: 202 bits (515), Expect = 4.150e-55
Identity = 118/312 (37.82%), Postives = 180/312 (57.69%), Query Frame = 3
Query:  333 EDVADLLNLARSEGDPFHAITLYKKALEAKPEDTLIIGEAAELLLQIGDTSTAKEVLTRSISLAPEEGPD----KYLNMAQLHEGREALEFYHKGLAIMQKQLGN------GDDNNKRQHLKQRLCIAYCSVGELFLTDLCFEEDAEKRCQDALNKSMMYDYG-GPEPPHSLANLRLSQGNVEEAAQSAEESFRRMCLCESPPEHEFRVSLAKVLLECSTTNDECSEKALEVLSGLMQEDDENVEVWYLTAVAFNSLRPPDFESARTYLNRADDMLSKIKQAQEEMGENFAYEDQVQLVREQLEVTASAAAE 1235
            ED+ D    A    +P  A+   ++A EA PED  I+ + AE+ + +G+T  A     R+I ++     D    ++L +AQL EG  A E Y  GL ++  +L         ++ +    ++ ++C AYC+V EL+LTDLC EE AE+ CQ+ALNK+M ++     EP   LA+LRLSQG   EAA     ++ R+  C    + E R+S A++LLEC+    +C++ AL++L    +EDDENVE+W+L  V F    PPD   A  YL RA +ML K+++A  +  E F YE Q++LV EQ+++  +AA E
Sbjct:   26 EDLMDRAQKAIDVCEPELAVRFMRRASEAAPEDASILDQLAEVEMGVGETERAGRAWMRAIEVSGNPDHDANAERWLYVAQLREGNGARESYEHGLRLLTARLQAMQASMVHEEGSSESDIRAQMCTAYCAVAELYLTDLCLEESAEEACQNALNKAMEFNANESHEPMQGLASLRLSQGMHAEAANLMHSAYERIKSCGHAMDPELRISTARLLLECAPNVSQCADDALDLLMDSKREDDENVEIWFLMGVGFYQQSPPDLTLAYEYLERAKEMLEKVREALLQENEPFPYEVQLRLVGEQMKLVEAAALE 337          
BLAST of mRNA_A-nodosum_M_contig8.72.1 vs. uniprot
Match: A0A1V9Z8H4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z8H4_9STRA)

HSP 1 Score: 187 bits (475), Expect = 5.780e-50
Identity = 109/279 (39.07%), Postives = 171/279 (61.29%), Query Frame = 3
Query:  378 PFHAITLYKKALEAKPEDTLIIGEAAELLLQIGDTSTAKEVLTRSISLAPEEGPDKYLNMAQLHEGREALEFYHKGLAIMQK---QLGNGDDNNKRQHLKQRLCIAYCSVGELFLTDLCFEEDAEKRCQDALNKSMMYDYGGPEPPHSLANLRLSQGNVEEAAQSAEESFRRMCLCE--SPPEHEFRVSLAKVLLECSTTNDECSEKALEVLSGLMQEDDENVEVWYLTAVAFNSLRPPDFESARTYLNRADDMLSKIKQAQEEMGENFAYEDQVQLVR 1199
            P  AI  ++KA   +P ++ I+    EL  +I D  TA +   RSI LAP+  P KYL  AQL +G E+ ++  +G+ IM++    L   +  ++ + L++++C AYCS+GEL+++DLC  +DAE +C+  L ++M YD G PEP  +LANLRL+Q   +EA    +E+++R+  C+  + P  EFR    K+L+E      E  E+A +VL G+MQEDDEN E+WYL    + +L   D++SA  +L R + ML+KIK+   +MG +F  + Q+  VR
Sbjct:   25 PELAIKFFQKAAALEPNNSEILDAIGELATEIDDPETALQAFHRSIELAPKSNPGKYLYAAQLLQGEESEQYTLQGINIMKELMPALPGIESTDESKLLRKQVCDAYCSLGELYMSDLCDADDAEAKCEFYLQEAMKYDMGLPEPTQALANLRLTQQRKDEACVCLDETYKRLSACDENTMPSLEFRTFTGKLLIEV-----EKYEQACDVLEGVMQEDDENAELWYLVGSCYKALE--DYDSALEFLERCEKMLAKIKK---DMGADFHLDAQLDDVR 293          
BLAST of mRNA_A-nodosum_M_contig8.72.1 vs. uniprot
Match: W4GVT1_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GVT1_9STRA)

HSP 1 Score: 185 bits (470), Expect = 3.340e-49
Identity = 113/303 (37.29%), Postives = 176/303 (58.09%), Query Frame = 3
Query:  321 VPQAEDVADLLNLARSEGD---PFHAITLYKKALEAKPEDTLIIGEAAELLLQIGDTSTAKEVLTRSISLAPEEGPDKYLNMAQLHEGREALEFYHKGLAIMQKQLGNGDDN-NKRQHLKQRLCIAYCSVGELFLTDLCFEEDAEKRCQDALNKSMMYDYGGPEPPHSLANLRLSQGNVEEAAQSAEESFRRMCLCE--SPPEHEFRVSLAKVLLECSTTNDECSEKALEVLSGLMQEDDENVEVWYLTAVAFNSLRPPDFESARTYLNRADDMLSKIKQAQEEMGENFAYEDQVQLVREQLE 1211
            V Q    A LL  A +  D   P  AI  ++KA   +P ++ I     EL  +IGD  TA +   +SI +AP+  P KYL  AQL +G E+ +F  +G+  M   L +  D+ ++ + LK+++C AYCS+GEL+++DLC   DAE +C+  L +++ +D G P+   ++AN RL Q   +EA    +E+ +R+  C+  + P  EFR+   K+L+E      E  E+A  VL G+MQEDDEN EVW+L    +N+L   D+++A  +L R D MLSK+   Q++MG+ F  + Q+  VR  +E
Sbjct:    8 VKQVATAAQLLERAETLVDQLQPELAIKFFQKAAALEPNNSEIYDAIGELATEIGDPHTALQAFLKSIDVAPKHNPGKYLYAAQLVQGEESEKFALQGIEHMSASLAHVPDHLDESKLLKKQICDAYCSLGELYMSDLCDAHDAEAKCEHYLQEALKFDLGLPDATQAMANFRLVQQRTDEAIAFLDETLKRLNACDEHTMPSLEFRIVTGKLLVEV-----EKFEQAAYVLEGVMQEDDENAEVWFLVGSCYNALE--DYDTALEFLERCDAMLSKL---QKDMGDEFELDQQLDTVRSLIE 300          
BLAST of mRNA_A-nodosum_M_contig8.72.1 vs. uniprot
Match: A0A1W0ABN5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABN5_9STRA)

HSP 1 Score: 184 bits (468), Expect = 5.550e-49
Identity = 107/279 (38.35%), Postives = 170/279 (60.93%), Query Frame = 3
Query:  378 PFHAITLYKKALEAKPEDTLIIGEAAELLLQIGDTSTAKEVLTRSISLAPEEGPDKYLNMAQLHEGREALEFYHKGLAIMQK---QLGNGDDNNKRQHLKQRLCIAYCSVGELFLTDLCFEEDAEKRCQDALNKSMMYDYGGPEPPHSLANLRLSQGNVEEAAQSAEESFRRMCLCE--SPPEHEFRVSLAKVLLECSTTNDECSEKALEVLSGLMQEDDENVEVWYLTAVAFNSLRPPDFESARTYLNRADDMLSKIKQAQEEMGENFAYEDQVQLVR 1199
            P  AI  ++KA   +P  + I     EL  +IGD  TA +   RSI LAP+  P K+L  AQL +G E+ ++  +G+A M++    +   ++ ++ + L++++C AYCS+GEL+++DLC  +DAE +C+  L ++M YD G PEP  +LANLRL+Q   ++A    +E+++R+  C+  + P  EFR    K+L+E      E  E+A +VL G+MQEDDEN E+W+L    + +L   D++SA  +L R + MLSK+K+   EMG  F  + Q+  VR
Sbjct:   25 PELAIKFFQKAAAMEPNRSEIFDAIGELATEIGDPDTAAQAFGRSIELAPKSNPGKWLYFAQLVQGEESEKYTLQGIAYMKELMPAMPGIENTDESKLLRKQICDAYCSLGELYMSDLCDLDDAEAKCEFYLQEAMKYDMGLPEPTQALANLRLTQQRKDDACACLDETYKRLGQCDENTMPSLEFRTFTGKMLIEV-----EKFEQACDVLEGVMQEDDENPELWFLVGTCYKALE--DYDSALEFLERCESMLSKLKK---EMGNEFHLDVQLDEVR 293          
BLAST of mRNA_A-nodosum_M_contig8.72.1 vs. uniprot
Match: A0A2D4BGB7_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BGB7_PYTIN)

HSP 1 Score: 185 bits (470), Expect = 5.710e-49
Identity = 109/312 (34.94%), Postives = 182/312 (58.33%), Query Frame = 3
Query:  324 PQAEDVADLLNLARSEGD---PFHAITLYKKALEAKPEDTLIIGEAAELLLQIGDTSTAKEVLTRSISLAPEEGPDKYLNMAQLHEGREALEFYHKGLAIMQKQL-GNGDDNNKRQHLKQRLCIAYCSVGELFLTDLCFEEDAEKRCQDALNKSMMYDYGGPEPPHSLANLRLSQGNVEEAAQSAEESFRRM---CLCESPPEHEFRVSLAKVLLECSTTNDECSEKALEVLSGLMQEDDENVEVWYLTAVAFNSLRPPDFESARTYLNRADDMLSKIKQAQEEMGENFAYEDQVQLVREQLEVTASAAAER 1238
            P+    A+L+  A S  D   P  A+  ++KAL  +P +T+++    EL  ++ +   A  V  +SI LAP + P K+L +AQL  G +A+++  +G+  +Q++L G   ++ + Q +K+++C AYCS+GEL++TDLC E+DAE RC++    ++ +D G PEP  +LANLRL+Q   +EA    EE++RR+   C   S P  EFR+   K+L+E      E  E+A +VL G+MQEDDEN E+W+L    + ++   D   +  +  + ++ML K+K+   E+ + F  + Q++ V E +       A R
Sbjct:    9 PKDYTAAELIAKAESLVDQCQPELAVKFFEKALLKEPTNTMLLDTIGELSTELDNPERALAVFQQSIQLAPAQNPSKWLYLAQLVGGEDAVKYTTQGITYLQQELQGVAAESQEAQVIKKQICXAYCSLGELYMTDLCDEDDAEARCENYFQSALQFDIGTPEPTQALANLRLTQQRRDEAVPLLEETYRRLAENCDENSTPSLEFRIFTGKLLIEV-----EKYEEACDVLEGVMQEDDENAELWFLVGTCYRAM--DDLSLSLEFFQKCEEMLQKLKK---ELRDEFHLDAQLESVTETIAELQQTIASR 310          
BLAST of mRNA_A-nodosum_M_contig8.72.1 vs. uniprot
Match: A0A6G0XGW0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XGW0_9STRA)

HSP 1 Score: 184 bits (468), Expect = 5.870e-49
Identity = 112/296 (37.84%), Postives = 177/296 (59.80%), Query Frame = 3
Query:  342 ADLLNLARS---EGDPFHAITLYKKALEAKPEDTLIIGEAAELLLQIGDTSTAKEVLTRSISLAPEEGPDKYLNMAQLHEGREALEFYHKGLAIMQKQLGNGDDN-NKRQHLKQRLCIAYCSVGELFLTDLCFEEDAEKRCQDALNKSMMYDYGGPEPPHSLANLRLSQGNVEEAAQSAEESFRRMCLCE--SPPEHEFRVSLAKVLLECSTTNDECSEKALEVLSGLMQEDDENVEVWYLTAVAFNSLRPPDFESARTYLNRADDMLSKIKQAQEEMGENFAYEDQVQLVREQLE 1211
            A LL  A +   E +P  AI  ++KA   +P ++ I     EL  +I D  TA +   RSI LAP+  P K+L  AQL +G E+ +F  +G+A M +QL +  D+ +  + LK+++C AYCS+GEL++TDLC  ++AE +C+  L +++ YD G PE   ++AN RL Q   +EA    +E+ +R+  C+  + P  EFR    K+L+E      E  E+A ++L G+MQEDDEN E+W+L    +N++   D+++A  +L R D ML+K+   Q EMG++F  + Q+  VR  +E
Sbjct:   12 AQLLERAEALVDECNPELAIKFFQKAAALEPNNSEIFDAIGELATEIRDPETALQAFLRSIELAPKHNPGKWLYAAQLVQGEESEKFALQGIAHMTEQLASIPDHLDTAKLLKKQICDAYCSLGELYMTDLCDLDEAESKCEQYLLEALKYDLGLPEATQAMANFRLVQQRKDEAISYLDETVKRLNACDEHTMPSLEFRTFTGKLLVEV-----EKYEQAADILEGVMQEDDENAELWFLVGSCYNAME--DYDTALEFLERCDAMLTKL---QTEMGDDFNLDQQLDTVRSLIE 297          
BLAST of mRNA_A-nodosum_M_contig8.72.1 vs. uniprot
Match: A0A0P1AV38_PLAHL (Tetratricopeptide TPR1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AV38_PLAHL)

HSP 1 Score: 184 bits (466), Expect = 1.770e-48
Identity = 115/338 (34.02%), Postives = 191/338 (56.51%), Query Frame = 3
Query:  339 VADLLNLARSEGD---PFHAITLYKKALEAKPEDTLIIGEAAELLLQIGDTSTAKEVLTRSISLAPEEGPDKYLNMAQLHEGREALEFYHKGLAIMQKQLGNGDDNN--KRQHLKQRLCIAYCSVGELFLTDLCFEEDAEKRCQDALNKSMMYDYGGPEPPHSLANLRLSQGNVEEAAQSAEESFRRM---CLCESPPEHEFRVSLAKVLLECSTTNDECSEKALEVLSGLMQEDDENVEVWYLTAVAFNSLRPPDFESARTYLNRADDMLSKIKQAQEEMGENFAYEDQVQLVREQLEVTASAAAERNSGKDRDAGSEDSSLSRTDMMSGTERSEVE 1328
            VADL+  A +  D   P  A+  Y++AL   P +T ++    EL  ++ +   A     +S+ L+P + P KY  ++QL  G+EA ++  +G+  +Q++L    D N  +   +K+++C AYCS+GEL++TDLC++E+AE RC+ +  ++M YD G PEP  +LANLRL Q N E A     E++RR+   C  ES P  +FR +  K+L+E      E  E+A +VL G+MQEDDEN E+W+L    + ++   D  +A  +  +   ML+ +K+   E+ + F   DQ++ V E +     + A R     +++ SE+   + TD + G E  ++E
Sbjct:   10 VADLVAKAEALVDQCQPELAVQFYERALLQDPSNTSLLDSIGELSTELDNPERALSAFQQSVRLSPSQNPTKYFYLSQLVVGKEAEQYMTQGITFLQQELQRQADPNSFEAMTIKKQICDAYCSLGELYMTDLCYDEEAEGRCEKSFEEAMKYDVGLPEPTQALANLRLVQQNKEGADSLLNETYRRLNENCDDESMPSLDFRTATGKMLIEV-----ERYEEACDVLEGVMQEDDENAELWFLVGTCYRAM--DDLPNALEFFEKCQQMLNNLKK---ELRDEFYLHDQLESVNETIAELLDSIANR---PPKESDSEEEKDAETDTI-GQEDVDME 333          
BLAST of mRNA_A-nodosum_M_contig8.72.1 vs. uniprot
Match: A0A6A3UGW2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UGW2_9STRA)

HSP 1 Score: 181 bits (458), Expect = 2.440e-47
Identity = 114/322 (35.40%), Postives = 182/322 (56.52%), Query Frame = 3
Query:  339 VADLLNLARSEGD---PFHAITLYKKALEAKPEDTLIIGEAAELLLQIGDTSTAKEVLTRSISLAPEEGPDKYLNMAQLHEGREALEFYHKGLAIMQKQLGNGDDNNKRQHL--KQRLCIAYCSVGELFLTDLCFEEDAEKRCQDALNKSMMYDYGGPEPPHSLANLRLSQGNVEEAAQSAEESFRRM---CLCESPPEHEFRVSLAKVLLECSTTNDECSEKALEVLSGLMQEDDENVEVWYLTAVAFNSLRPPDFESARTYLNRADDMLSKIKQAQEEMGENFAYEDQVQLVREQLEVTASAAAERNSGKDRDAGSEDSS 1280
            VADL+  A +  D   P  A+  ++KAL  +P +  ++    EL  ++ +   A     +S++LAP + P KY  ++QL  G EA  +  +G+  +Q++L    D +    L  K+++C A+CS+GEL++TDLC  E+AE RC++   +SM +D G PEP  +LANLRL Q N E A    EE+ RR+   C  +S P  EFR +  K+L+E      E  E+A +VL G+MQEDDEN E+W+L    + ++   D  +A  +  +   ML+K K+   E+ + F  +DQ++ V E +    ++ A R    D ++GSE+ S
Sbjct:   10 VADLVAKAEALVDQCQPELAVQFFEKALLQEPANASLLDSIGELSTELDNPERALSAFQQSVALAPAQNPSKYFYLSQLVTGEEAERYTMQGITQLQQELQQHVDPSTPAALTIKKQICDAFCSLGELYMTDLCDHEEAESRCENYFQESMKFDVGLPEPTQALANLRLVQQNKEAAEALLEETSRRLNENCDEDSMPSLEFRTATGKMLIEV-----ELYEQACDVLEGVMQEDDENAELWFLVGTCYRAM--DDLPNALEFFEKCQTMLNKFKK---ELRDEFYLQDQLESVEETIAELKTSIANRPPELDEESGSEEES 321          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8.72.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE28_ECTSI5.120e-13664.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZAV8_9STRA5.480e-6540.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2CWS8_9STRA4.150e-5537.82Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1V9Z8H4_9STRA5.780e-5039.07Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
W4GVT1_9STRA3.340e-4937.29Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A1W0ABN5_9STRA5.550e-4938.35Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A2D4BGB7_PYTIN5.710e-4934.94Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A6G0XGW0_9STRA5.870e-4937.84Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A0P1AV38_PLAHL1.770e-4834.02Tetratricopeptide TPR1 n=1 Tax=Plasmopara halstedi... [more]
A0A6A3UGW2_9STRA2.440e-4735.40Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8contigA-nodosum_M_contig8:1167977..1173659 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LE28
PFAMsTPR_16,TPR_8
Model size2234
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0019538,GO:0019941,GO:0030163,GO:0030433,GO:0033554,GO:0034976,GO:0036503,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0050896,GO:0051603,GO:0051716,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901698
Exons8
Evalue1.38e-141
EggNOG OGs28JWA@1|root,2QSAH@2759|Eukaryota
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-05_004280.1
Descriptionribosome biogenesis
Cds size1107
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8.72.1prot_A-nodosum_M_contig8.72.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig8 1168213..1172768 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870083.9363217-UTR-A-nodosum_M_contig8:1167976..11682121680870083.9363217-UTR-A-nodosum_M_contig8:1167976..1168212Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig8 1167977..1168212 +
1680870084.0553772-UTR-A-nodosum_M_contig8:1172768..11736591680870084.0553772-UTR-A-nodosum_M_contig8:1172768..1173659Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig8 1172769..1173659 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870083.9528685-CDS-A-nodosum_M_contig8:1168212..11682971680870083.9528685-CDS-A-nodosum_M_contig8:1168212..1168297Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8 1168213..1168297 +
1680870083.9679701-CDS-A-nodosum_M_contig8:1168421..11685971680870083.9679701-CDS-A-nodosum_M_contig8:1168421..1168597Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8 1168422..1168597 +
1680870083.9776468-CDS-A-nodosum_M_contig8:1169081..11693391680870083.9776468-CDS-A-nodosum_M_contig8:1169081..1169339Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8 1169082..1169339 +
1680870083.991174-CDS-A-nodosum_M_contig8:1170331..11704731680870083.991174-CDS-A-nodosum_M_contig8:1170331..1170473Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8 1170332..1170473 +
1680870084.0060291-CDS-A-nodosum_M_contig8:1170692..11707781680870084.0060291-CDS-A-nodosum_M_contig8:1170692..1170778Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8 1170693..1170778 +
1680870084.0200996-CDS-A-nodosum_M_contig8:1171008..11711211680870084.0200996-CDS-A-nodosum_M_contig8:1171008..1171121Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8 1171009..1171121 +
1680870084.0317028-CDS-A-nodosum_M_contig8:1171338..11714261680870084.0317028-CDS-A-nodosum_M_contig8:1171338..1171426Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8 1171339..1171426 +
1680870084.043059-CDS-A-nodosum_M_contig8:1172609..11727681680870084.043059-CDS-A-nodosum_M_contig8:1172609..1172768Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8 1172610..1172768 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig8.72.1

>prot_A-nodosum_M_contig8.72.1 ID=prot_A-nodosum_M_contig8.72.1|Name=mRNA_A-nodosum_M_contig8.72.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=369bp
MAKTNRKKSKHNSRGKTAAREKPSPSSEVPQAEDVADLLNLARSEGDPFH
AITLYKKALEAKPEDTLIIGEAAELLLQIGDTSTAKEVLTRSISLAPEEG
PDKYLNMAQLHEGREALEFYHKGLAIMQKQLGNGDDNNKRQHLKQRLCIA
YCSVGELFLTDLCFEEDAEKRCQDALNKSMMYDYGGPEPPHSLANLRLSQ
GNVEEAAQSAEESFRRMCLCESPPEHEFRVSLAKVLLECSTTNDECSEKA
LEVLSGLMQEDDENVEVWYLTAVAFNSLRPPDFESARTYLNRADDMLSKI
KQAQEEMGENFAYEDQVQLVREQLEVTASAAAERNSGKDRDAGSEDSSLS
RTDMMSGTERSEVEMDCA*
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mRNA from alignment at A-nodosum_M_contig8:1167977..1173659+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig8.72.1 ID=mRNA_A-nodosum_M_contig8.72.1|Name=mRNA_A-nodosum_M_contig8.72.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5683bp|location=Sequence derived from alignment at A-nodosum_M_contig8:1167977..1173659+ (Ascophyllum nodosum dioecious)
AAATACATAGGGTTTGTGTTAGGGATTGAAACTCTTCGACATGATCCAGC AAGTACGAGGCACCGGTATCTACCTGAAAGTAGACGGAGTGCTATATCGC CAGCCGGGAGCCTTCCAATACGTATTCGATTGAAGATTGGTCGATGAATC AAGCCGAAGCAGCTTCAAACCCACCGCATATTTGTCTTCAGGGGATTCGG CCAGCACTCTCCAATCGCAGGGAGTAACAGGACAAGATGGCCAAAACAAA TCGAAAAAAAAGCAAGCACAACAGCCGCGGAAAGACGGCGGCGAGGGAGA AACCTTCCCCTTCTTCTGAAGGTATGGATCGATGTTCCTGTTGTAACAGA TGGGTGGTTTCCGGTACAACTTAGAGGACCTATAAACTTGGCTGCACCTC TGACGCTCCCCACGTATTCAACTGCTCCCTCTGATTGCCACACAGTGCCG CAAGCGGAAGATGTCGCCGATCTATTAAACCTGGCGCGTTCCGAAGGTGA TCCGTTTCACGCCATAACCTTGTACAAAAAGGCTCTTGAGGCAAAACCTG AAGATACCTTAATAATTGGAGAGGCAGCAGAGCTTTTGCTGCAAATTGGG GACACTTCAACGGCGAAAGAGGTATTTGTGTTTTGCGAGAGTCTCGGATC GTACGTAACCGTTCCCCAGTGTGCCCTGATGGACGCCCACGGTGTTGGCT GAATCTTCAAGCGCTATTTTAGTTTTTTGCGTGTGTACCTCGTACCTTTG GCAAGCCAGCTGTCACGTTACCACGGCGTAACAACGGTTCTTGTGGGGAG GCAGAACTACTTACTGGAGCCTGGTCGACGAGTGATGGGCCTCTTGAAGC TGAAGACTTTCAAATAAGTATGTTTTGTCATAACTTATACTTAAGTATTG ACTCACTTCGATAGTTTCACAACTTTACACGAATGCGCACCGTCGGAATT TTAGATGCAGTACGGTTGTTACGCAATCCACTCAGCAGCGCGGATGGACG AGGAATATTTGTTATTGAGGTGTTCTGTACTGATTGTCCGCAAGGGTACG ACTCCACGAAACCTGTACAACGGCGTCAATGTCTACATTACATCCATTTT GTCAGGTTTTGACTCGAAGCATCTCGCTTGCACCGGAGGAAGGACCAGAT AAGTACTTGAACATGGCCCAGCTGCACGAAGGGCGAGAAGCTCTGGAGTT TTACCACAAAGGACTGGCTATAATGCAGAAGCAGCTTGGGAATGGTGATG ACAATAACAAACGGCAACACCTGAAGCAGCGGCTATGTATAGCCTATTGC AGTGTGGGAGAGCTCTTCCTGACAGACCTGTGCTTCGAGGAAGACGCGGA GAAACGGTGTCAGGCACGTCAAACGACAAAATGGGTTGTGTTCAGCAGGC CATACTGCGTATAAGAATCGATGCCAAATCTAGAAAATAGTCGAGAATTA TTGATGTTGAGAAATCTGGTGTGCTAGGTAGGGGAGTTTCCGAGCTTCCC CGTTCGCGTGTTCGGAGGGCCTTGGAGTTTGACTGCTGTGCTAAATTTTT CAATAAAAACTTTTGTCTTTCCAAAAGCGTTGATTCCCTTACTTTCCATG TACAAGTGCCTCCGATCATTTAACATGCCCACTTCATACCATTAGTCGGT GTGGAAAAAGAGAGGCGCATATTAATCGGTCCATGGTGAAACCTGAAAAG GCAGCACTCATTACTGGAACTACCTCGAGGACTACTGGCCCTGTGCCAGC GGACTGTCGGCAGTGAACGTAACGCCATCGGTACGCAATTGCGTGACCTG ATACACTCGGGACTGACTCGATGGCGGTTGGCGATATAAATAAATGGACG CCGCCGCGCAAATCTGGAGGAATCCCGTGAGTAAGCACCGAATTTACCCT GAGTGTGGAGAATAAGCAGGCTGACGCGGGACGGGACGGCCGAACCCGTC TCGAGAGACCAATATCTCAGACCCTAACGGGGACAGGGAAATATTCAATT TCCATGTTCAACTCTGGTGGAAGTTATGACTATACATACACATACATACA AACATAATGTACGAATAAGTTTTCAAGTCAAGTCGTAAGCAAGGTAAAGG AGACCTGAATGTAGGCCTTGTAAACCTTTTATCCAAGGCAGTCAGTTTGC AGTAACCTGGTTGAGTTTGGCTCCTCTCTAAATACAGAACCCGTAATTGA AGGCGCGGCTTCCTTGGATTTGCCGACACTCTAATCTGCGTCTACGCGGG ACCGAGATACGCTGGGTCTTACTGTGAAGGACCCACAAAAGTAGCGAAGT AGCTCAAACGATTATAATACTCCGTAGTTTACTGCTTCCTGGACTGTGTT CGCAGGATGCCTTGAATAAGAGCATGATGTACGATTACGGTGGGCCAGAG CCTCCTCATTCTTTGGCCAATCTTCGCCTGAGCCAAGGCAACGTCGAGGA AGCGGCGCAATCAGCGGAAGAATCTTTTCGGCGTATGTGCCTCTGCGGTA AGTAACTTCAGGGTGGTTCACAGGGCGTGGTGCTGAGCTATAAACCGAGG ACGGACAGCATAGAGAGCCTGCATGGTGAGACATTCACTGTTACACGTAC TACACATGAGACTGTCAGCGCAATTTGTACCGCATTGGTTAAACAAGACT GGATATGTAGAGCTAAGGAGACAGACCTCTCCTTCCGGTGTAACATCGCA ACTCTATTTATCTCAGAATCTCCACCGGAACACGAGTTTCGCGTCTCACT CGCTAAAGTATTGCTGGAGTGCTCGACAACCAACGATGAGTGTTCCGAAA AGGTGGGTCAATTGTACGCCCATTAATGCTCCTGCAATTCGAACAGTGTA GAGCACAGTTGTGGTGGGCAGGTAATTATGAATCGAGAGACGGAACATGC ATGTTTGGTTTCAGTTCACCACGTACATGTTTCAATTAGTATTTCCCACT GGCCGCACACCACAGCACGGACGGGTCATCCTTCTCGCCCTCTTGTTGGC TATTGGCTATTCTCACAACCATGTACTAGCAGGCTCTGGAGGTATTGAGC GGATTGATGCAAGAGGATGATGAGAACGTTGAAGTTTGGTACCTCACAGC TGTTGCCTTCAACAGCTTACGACCTCCCGACTTTGAAAGCGCAAGGTGCG TATTGCCTGGTATTTAAGACTAATATAGTGAGACTGTGGAGGCCCTCGAG TAACTTCGGCCGCGGAGAAAGGGTTGTCGGTATTTTCATCCTGTACCTGG TACAGTAGGCTCTACCGGTATGCCTTAGCAGCACTTTGGCCCTATTCTTT GTGTCGCGTCTTCATTCATCATCCTTTATTCTGAAGATTCACGCTCGCGT TTTGTTCCGCAGGACCTACTTGAATAGAGCCGACGACATGCTCTCCAAGA TAAAACAAGCGCAAGAGGAGATGGGCGAGAACTTCGCTTACGAAGATCAG GTAGCTATAGGCTATAGGCTCCATTACTGAATCGGTGCGGTGAAGCCTTT CTATGAAAGTATCGCGAAAGTCCTCAAACCCTACCGTAACCGAAGTTGTT TCCGATACGGCTGCCGCAGCCTTTCGCCTTTGCTTCGAGGCGATTAACAC CTACAGTACCGTGATTCGTCTTGTCGCATCAGCTGTGAAGAAGTTTTAAG AGCTGAGCTAAACTCAAGAGACTGATGTGACTCCCTTGCTTCGTGTGTAT GACACTTTGCCTATATTTTAAACATGCTATAACCACTTCATACCAATACT GGGTATGGGAAAAGGGAGGCGCACATTATTTCGGTCGCCCCGGTAGCTCA GAGGTACCTCGTAACCCTCTGATACGTTGGGACGTGAGTTCGATCCCGGC AAACGGGATTTTCTCACTAAAAAAATAAAAAACAAAAATAAAAATGCATA ACGGGTGGAGAACGATTAAATCGTTAGTACACAAAATTCGACTTCACGGT CGACGAGGGAAAGGAATGGCTAAATCCTTCTCGCGAGAAAAATTAAGGCA CGCACCGCAGAAAGAAGGTAGATGAGAAGTCCTGTGTGGCCTTCCTCCTG TGTGACCCCGGCTGGTACGTCCAACGAACTTGATGTCCAGAATGAATAGG AAGAAAACATACACAACACGCATTAATTGGTCCATGGTGACCCGCAAAAT GGCAGCACCCGTTACAGGAACTACCTTGAGGACTACTGGCCCTGTGCCGG CGGACCCTCGGCAGTGAACGCCATCGGTACGCAATCGGGTGACCCTATTG ACGCGGGACTGACCCAGTGACGTATGGCGGTTTAATGGAATAAACGGACG CCGCGCGGAAACCGGGAGAAATCCCGTGAGTAAGCACCAGATCCAGCCTG AGTATGGAGAACGGGCAGGCTAACGCGAGACGGGGCGGCTGAACCCGTCT CGTGAGACCAAATTTTCAGGCGCGTACGGGGACAAGAAAATATTCATTTT CCCTGTTCAGCTGACCACGAGCAGGATTGGCAACCTTATCTGGTTGATCC ATACTCTGCTATATGTGATGACCATACATACATTCATACTACGCACCACG TACCCGGTAACTGGTTAAAAACAATTAGCCATCGCATTTTGTGCTATCGG GGTCGACACGACACGCCTTGTCCTCCGATGAAGGTGCAACTGGTACGAGA GCAGTTAGAAGTGACGGCAAGTGCAGCAGCAGAAAGGAACAGCGGGAAGG ATAGGGATGCAGGTTCGGAGGACTCATCTTTGAGCAGAACGGACATGATG AGCGGGACAGAAAGATCGGAAGTGGAGATGGATTGCGCGTGATATGCGTG ATATGCGCGGGCATCTAATGGCGCAGCTATATTGCAACTGCACGCGCTTG TTGGACAGCTGCACTGATTTGAGTGTGTGTGTGTGTGTGTGTGTGTGTAT TTATTAAATTGCGCATCACCACGCAATCCGGCCCTGTCATCCTAGTGTGT GTGTGCGTTTTCTTCCCATTCATTCTGGAAACCAAGTTCGTTGGACGTAC CAGCCGGGGTCACACAGGAGGAAGGTCACACAGGATTTCTCATCCACCTT CTTTCTGCGGGGCGTGCCTTAATTTTTCTCGCGAGAAGGATTCAGCCATT CCTTTATCTCGTCGACCGTGAAGTCGAATTTTGTGTACTAACGATTTAAT CGTTCTACACCCGTTGGGCATTTTTAGTTTCATTTTTTAGTTTTTCAGAG AGAAAAATCCCGTTTGCCGGGATCGAACTCAAGTCCCAACGTGTCAGAGG TTACATGGTACCTCTGAGCTACCGGGGCGACCGGCTAACTGATTTGAGTG CAACGGGATTATTTTTTAGTGTAGCAGTACCTCGTTTTATCGAGCAGTTT GCGCTTCGCCCAAGTTGAAACTGACATCGATGGACGCTTTCAGCAGATGA AACACTCATGGGAGGGCAGGATTCGTGTGAGCTGCTACTTCTGTCGGTGC CCGGGCATGGTGAAACCAAACCTTTACAAAAAAGTCTTTATAAACATGTG CATACATGGCATATATATGCACCCATGACGGCACAGCCGCCGCGCGATCT TATCCTTACGTTCAGGTGGAGTCTTTCGCGCTTGCCTCACGTCGCATTAC GGTGTTGATAAACTCGCGTACGGAACGGGTTTTAATAGTTTTGGTTGCCG CTAGTAAAATAAGGTCGACAGCCCAAAGATCAC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig8:1167977..1173659+

>mRNA_A-nodosum_M_contig8.72.1 ID=mRNA_A-nodosum_M_contig8.72.1|Name=mRNA_A-nodosum_M_contig8.72.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1107bp|location=Sequence derived from alignment at A-nodosum_M_contig8:1167977..1173659+ (Ascophyllum nodosum dioecious)
ATGGCCAAAACAAATCGAAAAAAAAGCAAGCACAACAGCCGCGGAAAGAC
GGCGGCGAGGGAGAAACCTTCCCCTTCTTCTGAAGTGCCGCAAGCGGAAG
ATGTCGCCGATCTATTAAACCTGGCGCGTTCCGAAGGTGATCCGTTTCAC
GCCATAACCTTGTACAAAAAGGCTCTTGAGGCAAAACCTGAAGATACCTT
AATAATTGGAGAGGCAGCAGAGCTTTTGCTGCAAATTGGGGACACTTCAA
CGGCGAAAGAGGTTTTGACTCGAAGCATCTCGCTTGCACCGGAGGAAGGA
CCAGATAAGTACTTGAACATGGCCCAGCTGCACGAAGGGCGAGAAGCTCT
GGAGTTTTACCACAAAGGACTGGCTATAATGCAGAAGCAGCTTGGGAATG
GTGATGACAATAACAAACGGCAACACCTGAAGCAGCGGCTATGTATAGCC
TATTGCAGTGTGGGAGAGCTCTTCCTGACAGACCTGTGCTTCGAGGAAGA
CGCGGAGAAACGGTGTCAGGATGCCTTGAATAAGAGCATGATGTACGATT
ACGGTGGGCCAGAGCCTCCTCATTCTTTGGCCAATCTTCGCCTGAGCCAA
GGCAACGTCGAGGAAGCGGCGCAATCAGCGGAAGAATCTTTTCGGCGTAT
GTGCCTCTGCGAATCTCCACCGGAACACGAGTTTCGCGTCTCACTCGCTA
AAGTATTGCTGGAGTGCTCGACAACCAACGATGAGTGTTCCGAAAAGGCT
CTGGAGGTATTGAGCGGATTGATGCAAGAGGATGATGAGAACGTTGAAGT
TTGGTACCTCACAGCTGTTGCCTTCAACAGCTTACGACCTCCCGACTTTG
AAAGCGCAAGGACCTACTTGAATAGAGCCGACGACATGCTCTCCAAGATA
AAACAAGCGCAAGAGGAGATGGGCGAGAACTTCGCTTACGAAGATCAGGT
GCAACTGGTACGAGAGCAGTTAGAAGTGACGGCAAGTGCAGCAGCAGAAA
GGAACAGCGGGAAGGATAGGGATGCAGGTTCGGAGGACTCATCTTTGAGC
AGAACGGACATGATGAGCGGGACAGAAAGATCGGAAGTGGAGATGGATTG
CGCGTGA
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