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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1454 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 756 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866699.7136965-UTR-A-nodosum_M_contig1263:88663..88742 | 1680866699.7136965-UTR-A-nodosum_M_contig1263:88663..88742 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1263 88664..88742 + |
| 1680866699.7257724-UTR-A-nodosum_M_contig1263:89476..89573 | 1680866699.7257724-UTR-A-nodosum_M_contig1263:89476..89573 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1263 89477..89573 + |
| 1680866699.745147-UTR-A-nodosum_M_contig1263:90329..90851 | 1680866699.745147-UTR-A-nodosum_M_contig1263:90329..90851 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1263 90330..90851 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866699.733524-CDS-A-nodosum_M_contig1263:89573..90329 | 1680866699.733524-CDS-A-nodosum_M_contig1263:89573..90329 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1263 89574..90329 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1263.8.1 >prot_A-nodosum_M_contig1263.8.1 ID=prot_A-nodosum_M_contig1263.8.1|Name=mRNA_A-nodosum_M_contig1263.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=252bp
MRPPPPAGGSGATPTSAALGGRASRLSTSNRGAGGAEATGGGRASRNAYP
SITPMDVDEGAAERTPAAQSSRRPNTGAASKRTGNAAAGGRTRQTPVGTG
TVGRVPADSRWAIGKNNDGGGINRSVSAGGGGDRGLGGAAVDGRKEKRGD
ATVKMTREQWQRAQYEKTMAFAAVVIRRVSALGGEEEGEKDKETERVVAA
LAVLKAARENTVVGAGAGAWAGDLARLGGCQGASSSRRREEKDEALDECL
V* back to topmRNA from alignment at A-nodosum_M_contig1263:88664..90851+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig1263.8.1 ID=mRNA_A-nodosum_M_contig1263.8.1|Name=mRNA_A-nodosum_M_contig1263.8.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2188bp|location=Sequence derived from alignment at A-nodosum_M_contig1263:88664..90851+ (Ascophyllum nodosum dioecious)
GTGGAGGCGGCGGCGCCAGCGTGGGCGAGGGAGGAACGGAAGACAGGGGA
AGGGTACCTTGGAGATATCAGGGACAGAGGTTAGCATGACCGGATAACGT
CCAGTAATCGTGAGAAGTCCCTTCTTACACACACACACACACACCGCCCC
TCTGCAACGACGCTTCGAGCTCACGTTTCCCCCTTATTTTTAATAGAACA
GTCATATACATATATTATCGCGTAAACGCTCAAAATCTGTCTGGGGGGAA
CGGTATTCTTGGGCTTGAGACGGTACCGTACGGCCCTAGAGTGTTTCTGA
TAGTTGAAAGAGTGTGTGTGTGTTTTCTTCCCATCCATTCTGGACATCAA
GTTCGTTGGACGTACCAGCCGGGGTCACACAGGAGGAAGGTCACACAGGA
TTTCTCATCCACCTTCTTTCTGCGGTGCGTGCCTTAAGTTTTCTCGCGAG
AAGGATTCAGCCATTCCTTTCCCTCGTCGACCGTGAAGTCGAATTTTGTG
TACTAACGATTTAATTGTTCTCCACCCGTTGGGCTTTTTTAGTTTTAGTT
TTTAGTTTTTTAGTGAGAAAAATCCCGTTTGCCGGGATTGAGCTCACGTC
CCAACGTGTCAGAAGGTTATATGGTTACCTCTGAGCTACCGGGGCGAGAA
AGAATTGCTACCCCGTCCTCCCACATAACCACGCGAACATACGTTCCCCC
CGCAGCTTCACCATCGTGAGAGTGGAGCCTGCTTCTGGTACATCTGACTG
TCCTTGTTTTATCTGCCACCCACCATGCTTGTTGGTTGCCTCCCCCATCT
CTCCACAACACAGCATTACGCAACACAGGCGGGTAGCAACCCCCGGTACG
ACCACCCCCCCGGCGTCGAGCCATGCTGGGCACGCGGCGAACCCCGCCGC
AAGGAGCTCCATGCGTCCGCCTCCGCCTGCTGGAGGCTCCGGAGCGACGC
CAACGAGCGCTGCCCTAGGCGGCCGAGCGTCGCGACTGTCAACCTCGAAC
AGAGGCGCAGGCGGCGCCGAAGCCACCGGGGGCGGCCGAGCGTCTCGCAA
CGCCTACCCAAGTATAACTCCCATGGATGTAGACGAGGGAGCGGCGGAAA
GGACCCCGGCTGCACAGAGCAGCCGCCGTCCGAACACGGGTGCCGCTTCC
AAGAGGACGGGCAACGCCGCCGCCGGTGGCAGGACTAGGCAAACGCCGGT
AGGGACAGGGACGGTTGGCAGGGTTCCGGCTGATTCGAGGTGGGCGATAG
GGAAAAACAATGATGGCGGCGGTATAAACAGAAGCGTTAGCGCCGGTGGC
GGTGGAGACAGAGGTCTGGGCGGCGCCGCGGTTGACGGCAGGAAAGAGAA
AAGAGGAGACGCGACAGTGAAGATGACCCGTGAGCAGTGGCAGCGCGCGC
AGTACGAGAAGACGATGGCGTTCGCCGCGGTGGTGATCCGGCGGGTGTCG
GCTCTCGGCGGCGAGGAGGAGGGGGAAAAGGACAAGGAGACGGAGAGGGT
GGTTGCCGCGCTGGCCGTCCTCAAGGCCGCGAGAGAAAATACGGTCGTGG
GGGCGGGGGCCGGAGCGTGGGCGGGAGACCTGGCAAGACTGGGCGGTTGC
CAGGGTGCTTCCTCATCAAGAAGGCGGGAAGAGAAGGATGAAGCACTTGA
CGAGTGTTTAGTCTAGTCTAGTGTGCTCACGAATAAACGCGTCGCGAAAT
GATCGCTCCGTGGTCGTAAGACAGTAGACTATTAGACTAAATCGATACCA
GACCAAAATACATTACTCCATATTTAGTACAGTACCAGGTATTAATAGTA
AGTGCGGACAAAAGAGCAAAAAGGGGGGCGCACATCAATTATTTTTATTA
ATGCTGACTGTAGTCCATGATTAGACTACCTGAATAGGCAAAACCCGTAA
CTCAAGTTAGCTTGAGGACTAGACTCTTGTCCCAGTGCCGGTGGCGGGCT
CTCGACGGTGGGCGCCATCGGTACGCAATTGCATGACCTGGTTTGCTGGT
CCCGAAGGCGGTTGACGGTTCCTCTAAGAGAACCTTATTTCTCTAGAGGC
TTCACTGGACCAAAAAGAAAAATGTGAATGAATGAGTGTCCGGTGTCACA
ACGAAGGCCCGAACCACGCATTTTTTTGAGCCGAACGCGCGCGGCGCGAA
AAGCTATCCCATCGCTCACCTCATACGATTGTAGACGC back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig1263:88664..90851+ >mRNA_A-nodosum_M_contig1263.8.1 ID=mRNA_A-nodosum_M_contig1263.8.1|Name=mRNA_A-nodosum_M_contig1263.8.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=756bp|location=Sequence derived from alignment at A-nodosum_M_contig1263:88664..90851+ (Ascophyllum nodosum dioecious)
ATGCGTCCGCCTCCGCCTGCTGGAGGCTCCGGAGCGACGCCAACGAGCGC
TGCCCTAGGCGGCCGAGCGTCGCGACTGTCAACCTCGAACAGAGGCGCAG
GCGGCGCCGAAGCCACCGGGGGCGGCCGAGCGTCTCGCAACGCCTACCCA
AGTATAACTCCCATGGATGTAGACGAGGGAGCGGCGGAAAGGACCCCGGC
TGCACAGAGCAGCCGCCGTCCGAACACGGGTGCCGCTTCCAAGAGGACGG
GCAACGCCGCCGCCGGTGGCAGGACTAGGCAAACGCCGGTAGGGACAGGG
ACGGTTGGCAGGGTTCCGGCTGATTCGAGGTGGGCGATAGGGAAAAACAA
TGATGGCGGCGGTATAAACAGAAGCGTTAGCGCCGGTGGCGGTGGAGACA
GAGGTCTGGGCGGCGCCGCGGTTGACGGCAGGAAAGAGAAAAGAGGAGAC
GCGACAGTGAAGATGACCCGTGAGCAGTGGCAGCGCGCGCAGTACGAGAA
GACGATGGCGTTCGCCGCGGTGGTGATCCGGCGGGTGTCGGCTCTCGGCG
GCGAGGAGGAGGGGGAAAAGGACAAGGAGACGGAGAGGGTGGTTGCCGCG
CTGGCCGTCCTCAAGGCCGCGAGAGAAAATACGGTCGTGGGGGCGGGGGC
CGGAGCGTGGGCGGGAGACCTGGCAAGACTGGGCGGTTGCCAGGGTGCTT
CCTCATCAAGAAGGCGGGAAGAGAAGGATGAAGCACTTGACGAGTGTTTA
GTCTAG back to top
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