mRNA_A-nodosum_M_contig1261.39.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1261.39.1
Unique NamemRNA_A-nodosum_M_contig1261.39.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig1261.39.1 vs. uniprot
Match: A0A6H5JPB9_9PHAE (ABC1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPB9_9PHAE)

HSP 1 Score: 421 bits (1081), Expect = 1.040e-135
Identity = 210/293 (71.67%), Postives = 247/293 (84.30%), Query Frame = 3 
Query:    3 MMPLNQLYKQLEKSFGEDWRSKLSSFNETPIAAASIGQVHRARLLDGTEVAMKIQYPGVADSVESDLRNLQLLVKLTNILPPGLYIDEIIKVGREELSEECDYEKEAAHQERFRKLIEADEHLRKWATVPKVVPELLSKEVLTTHLAPGVPVDQILDMPQEVRNHVAKLMLRCTMYELFEWRFMQTDPN*GNFLFDRATGKMTLIDFGACREYNKKFVDGYFRLVWAAANRDEETILEARSLENDQ*KLLYGTLLHRIQVSQKLKFLTGDESRSMMDAHVKARLVVGEPFVNK 881
            +MPL QL++QLEK+ G DWRSKL++F+ETPIAAASIGQVHRA+L DGT+VAMKIQYPGVADSVESDL+NLQ LV+LTNILPPGLYI+EII+V REEL EECDYE+EAA+QERF+KL+ +DE LRKW +VP VV EL+SKEVLTTHLAPGVPVDQ+L MPQEVRNHVA+LMLRCT+ ELF+WRFMQTDPN GNFLFDR TGKM+LIDFGACREY K FVD Y RLVW+AAN+DE  I+                     +VSQ+LKFLTGDE++ MM AH++A LVVGEPF+++
Sbjct:  340 VMPLKQLHRQLEKNLGMDWRSKLAAFDETPIAAASIGQVHRAKLPDGTDVAMKIQYPGVADSVESDLKNLQRLVQLTNILPPGLYIEEIIRVAREELGEECDYEREAANQERFKKLVGSDESLRKWVSVPTVVHELVSKEVLTTHLAPGVPVDQVLPMPQEVRNHVARLMLRCTINELFDWRFMQTDPNWGNFLFDRETGKMSLIDFGACREYRKGFVDDYLRLVWSAANQDEAEIM---------------------RVSQELKFLTGDETQMMMKAHLQAGLVVGEPFIDR 611
[Close]
BLAST of mRNA_A-nodosum_M_contig1261.39.1 vs. uniprot
Match: A0A835YMK7_9STRA (Protein required for ubiquinone biosynthesis and for respiratory growth n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMK7_9STRA)

HSP 1 Score: 322 bits (824), Expect = 2.530e-97
Identity = 161/289 (55.71%), Postives = 209/289 (72.32%), Query Frame = 3 
Query:    6 MPLNQLYKQLEKSFGEDWRSKLSSFNETPIAAASIGQVHRARLLDGTEVAMKIQYPGVADSVESDLRNLQLLVKLTNILPPGLYIDEIIKVGREELSEECDYEKEAAHQERFRKLIEADEHLRKWATVPKVVPELLSKEVLTTHLAPGVPVDQILDMPQEVRNHVAKLMLRCTMYELFEWRFMQTDPN*GNFLFDRATGKMTLIDFGACREYNKKFVDGYFRLVWAAANRDEETILEARSLENDQ*KLLYGTLLHRIQVSQKLKFLTGDESRSMMDAHVKARLVVGEPF 872
            MP  QL+ QL  + G+ WR++L+ F+E P+AAASIGQVHRA+LLDGTEVAMKIQYPGVADS+ESDL NL+ LV +TN+LPPGL+++EI++V REEL  ECDY  EAA+QERFR L++ D  L K  +VP VV EL++ +VLTTH+  GV +D++  + Q+ RN VA+L+LR T+ ELF WRFMQTDPN GN+L+D     + LIDFGACR Y+K+FVD Y +LVWAAAN D +T+                      ++S+ L+FLTG E+  M+ AH  A LVVGEPF
Sbjct:  348 MPAKQLHAQLRAALGDGWRARLAEFDEAPLAAASIGQVHRAKLLDGTEVAMKIQYPGVADSIESDLSNLERLVTMTNLLPPGLFVEEIVEVAREELKLECDYTLEAANQERFRALVQQDPELSKHVSVPAVVHELVTPQVLTTHMVRGVHIDRVAALGQDARNAVARLLLRLTLRELFAWRFMQTDPNWGNYLYDADAATLHLIDFGACRAYDKRFVDAYLKLVWAAANGDADTLT---------------------RISRDLEFLTGAETPEMLAAHAGAGLVVGEPF 615
[Close]
BLAST of mRNA_A-nodosum_M_contig1261.39.1 vs. uniprot
Match: A0A3M6VPM4_9STRA (ABC1 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VPM4_9STRA)

HSP 1 Score: 310 bits (793), Expect = 3.990e-94
Identity = 162/290 (55.86%), Postives = 206/290 (71.03%), Query Frame = 3 
Query:    3 MMPLNQLYKQLEKSFGEDWRSKLSSFNETPIAAASIGQVHRARLLDGTEVAMKIQYPGVADSVESDLRNLQLLVKLTNILPPGLYIDEIIKVGREELSEECDYEKEAAHQERFRKLIEADEHLRKWATVPKVVPELLSKEVLTTHLAPGVPVDQILDMPQEVRNHVAKLMLRCTMYELFEWRFMQTDPN*GNFLFDRATGKMTLIDFGACREYNKKFVDGYFRLVWAAANRDEETILEARSLENDQ*KLLYGTLLHRIQVSQKLKFLTGDESRSMMDAHVKARLVVGEPF 872
            +MP NQL++QLE  FGEDW+SK   F++ PIAAASIGQVHRA L++   VA+KIQYPGVADS+ SDL NL+ LV  TNILP GLYIDEII+VG EEL+ ECDY KEA +QERFR+LIE    + +   VP+V PEL +  +LTT L  GV VD+ + + Q+VRN + + +L  T++ELF WRFMQTDPN  NF+++ +T K+ L+DFGA REY K FVD YF +VWAAAN DE+T++++                     S KL FLTGDES +MM AH+ A +VVGEPF
Sbjct:  242 VMPKNQLHQQLETEFGEDWQSKFLEFDDVPIAAASIGQVHRATLVNRDRVAIKIQYPGVADSIGSDLLNLKRLVTYTNILPRGLYIDEIIRVGEEELTAECDYIKEAENQERFRELIEQS-GMGEQYVVPRVYPELSTARILTTQLISGVAVDKAVHLSQDVRNSIGRRLLELTIHELFNWRFMQTDPNWSNFMYNASTDKIGLVDFGAAREYPKSFVDEYFNVVWAAANEDEKTMIDS---------------------SIKLHFLTGDESPAMMRAHIAAGMVVGEPF 509
[Close]
BLAST of mRNA_A-nodosum_M_contig1261.39.1 vs. uniprot
Match: A0A4D9DI78_9STRA (ABC1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DI78_9STRA)

HSP 1 Score: 306 bits (785), Expect = 2.150e-92
Identity = 158/292 (54.11%), Postives = 201/292 (68.84%), Query Frame = 3 
Query:    3 MMPLNQLYKQLEKSFGEDWRSKLSSFNETPIAAASIGQVHRARLLDGTEVAMKIQYPGVADSVESDLRNLQLLVKLTNILPPGLYIDEIIKVGREELSEECDYEKEAAHQERFRKLIEADEHLRKWATVPKVVPELLSKEVLTTHLAPGVPVDQILDMPQEVRNHVAKLMLRCTMYELFEWRFMQTDPN*GNFLFDRATGKMTLIDFGACREYNKKFVDGYFRLVWAAANRDEETILEARSLENDQ*KLLYGTLLHRIQVSQKLKFLTGDESRSMMDAHVKARLVVGEPFVN 878
            +MP  QL+ QLE   G  WR++  +F E P+AAASIGQVHRAR +DG +VA+K+QYPGV DS+ESDL+NL+ LV   N+LPPGLY+DEI+ V REEL  ECDY+ EA +QERF+ L+E+D  L    +VP VV +L S++VLT+    G PVD+++ + Q+ RN VA+L+L  T+ ELF+WRFMQTDPN  NFL+D +TGK+ L+DFGA R Y K FVD Y  LVWAAANRD   ++ A                     S +L FLTGDES  M+ AH  A LVVGEPFVN
Sbjct:  282 VMPRAQLHAQLEAELGAGWRARFRTFGEKPVAAASIGQVHRARTIDGRDVAVKVQYPGVGDSIESDLKNLKRLVTYLNVLPPGLYVDEILDVAREELILECDYKLEAQNQERFKLLVESDPALIPHMSVPGVVSDLSSRQVLTSEWMTGEPVDRVVALDQDTRNRVARLILLLTLRELFDWRFMQTDPNWSNFLYDGSTGKLALLDFGASRSYQKAFVDKYLELVWAAANRDTSKLMIA---------------------SHQLGFLTGDESTQMLRAHESAGLVVGEPFVN 552
[Close]
BLAST of mRNA_A-nodosum_M_contig1261.39.1 vs. uniprot
Match: H3GJS1_PHYRM (ABC1 domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=H3GJS1_PHYRM)

HSP 1 Score: 301 bits (772), Expect = 2.640e-91
Identity = 157/290 (54.14%), Postives = 204/290 (70.34%), Query Frame = 3 
Query:    3 MMPLNQLYKQLEKSFGEDWRSKLSSFNETPIAAASIGQVHRARLLDGTEVAMKIQYPGVADSVESDLRNLQLLVKLTNILPPGLYIDEIIKVGREELSEECDYEKEAAHQERFRKLIEADEHLRKWATVPKVVPELLSKEVLTTHLAPGVPVDQILDMPQEVRNHVAKLMLRCTMYELFEWRFMQTDPN*GNFLFDRATGKMTLIDFGACREYNKKFVDGYFRLVWAAANRDEETILEARSLENDQ*KLLYGTLLHRIQVSQKLKFLTGDESRSMMDAHVKARLVVGEPF 872
            +MP +QL++QLE   GEDWRSK   F++ PIAAASIGQVHRA LL+G  VA+KIQYPGVA+S+ SDL NL+ LV  TNILP GLYIDEII+VG+EEL+ EC+Y  EA +QERF+KLI A   + +   VP+V  EL +  +LTT L  GV VD+ + + Q+VRN + + +L  T++ELF WRFMQTDPN  NF+++ +T  + L+DFGA REY K FVD YF +VWAAAN DE+T++++                     S K+ FLTGDES +MM AH+ A +VVGEPF
Sbjct:  218 VMPKDQLHQQLESELGEDWRSKFQEFDDVPIAAASIGQVHRATLLNGDRVAIKIQYPGVAESIGSDLLNLKRLVTYTNILPRGLYIDEIIRVGKEELTAECNYANEAENQERFKKLI-AQHGMGEKYVVPRVYRELSTSRILTTQLISGVAVDKAVHLSQDVRNSIGRRILDLTIHELFNWRFMQTDPNWSNFMYNASTDTIGLVDFGAAREYPKSFVDDYFNVVWAAANEDEKTLVDS---------------------SIKMHFLTGDESPAMMRAHIAAGMVVGEPF 485
[Close]
BLAST of mRNA_A-nodosum_M_contig1261.39.1 vs. uniprot
Match: A0A0P1AZD8_PLAHL (Atypical abc1 abc1-a protein kinase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AZD8_PLAHL)

HSP 1 Score: 301 bits (771), Expect = 7.020e-91
Identity = 154/290 (53.10%), Postives = 203/290 (70.00%), Query Frame = 3 
Query:    3 MMPLNQLYKQLEKSFGEDWRSKLSSFNETPIAAASIGQVHRARLLDGTEVAMKIQYPGVADSVESDLRNLQLLVKLTNILPPGLYIDEIIKVGREELSEECDYEKEAAHQERFRKLIEADEHLRKWATVPKVVPELLSKEVLTTHLAPGVPVDQILDMPQEVRNHVAKLMLRCTMYELFEWRFMQTDPN*GNFLFDRATGKMTLIDFGACREYNKKFVDGYFRLVWAAANRDEETILEARSLENDQ*KLLYGTLLHRIQVSQKLKFLTGDESRSMMDAHVKARLVVGEPF 872
            +MP +QL++QLE   G +WRS+   F++ PIAAASIGQVHRA LL+G  VA+KIQYPGVA+S+ SDL NL+ LV  TNILP GLYIDEII+VG+EEL+ ECDY  EA +QERF+KLI+     RK+  VP+V  EL +  +LTT L  GV +D+ + + QEVR+ +A+ +L  T++ELF W FMQTDPN  NF+++ +T  + L+DFGA REY K FVD YF +VWAAAN DE+T+++                      S K++FLTGDES  M+ AH+ A +VVGEPF
Sbjct:  241 VMPKDQLHRQLENELGHEWRSRFQEFDDVPIAAASIGQVHRATLLNGDRVAIKIQYPGVAESISSDLLNLKRLVTYTNILPRGLYIDEIIRVGKEELTAECDYVSEAHNQERFKKLIDESGMNRKYV-VPRVYRELSTSRILTTQLISGVAIDKAVHLSQEVRDSIARRILELTIFELFNWHFMQTDPNWSNFMYNASTDTIGLVDFGAAREYAKSFVDDYFNIVWAAANEDEKTLID---------------------YSIKMRFLTGDESPGMLRAHIAAGMVVGEPF 508
[Close]
BLAST of mRNA_A-nodosum_M_contig1261.39.1 vs. uniprot
Match: M4B4X6_HYAAE (ABC1 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B4X6_HYAAE)

HSP 1 Score: 301 bits (772), Expect = 9.560e-91
Identity = 157/290 (54.14%), Postives = 203/290 (70.00%), Query Frame = 3 
Query:    3 MMPLNQLYKQLEKSFGEDWRSKLSSFNETPIAAASIGQVHRARLLDGTEVAMKIQYPGVADSVESDLRNLQLLVKLTNILPPGLYIDEIIKVGREELSEECDYEKEAAHQERFRKLIEADEHLRKWATVPKVVPELLSKEVLTTHLAPGVPVDQILDMPQEVRNHVAKLMLRCTMYELFEWRFMQTDPN*GNFLFDRATGKMTLIDFGACREYNKKFVDGYFRLVWAAANRDEETILEARSLENDQ*KLLYGTLLHRIQVSQKLKFLTGDESRSMMDAHVKARLVVGEPF 872
            +MP +QLY+QLE   GEDWRSK   F++ PIAAASIGQVHRA LL+G  VA+KIQYPGVA S+ SDL NL+ LV  TNILP GLYIDEII+VG EEL+ ECDY +EAA+QERF++LI+      ++  VP+V  EL +  +LTT L  GV VD+ + + Q+VRN + + +L  T++ELF WRFMQTDPN  NF+++ +T  + L+DFGA REY K FVD YF +VWAAAN D++T+++                      S K++FLTGDES +MM AHV A + VGEPF
Sbjct:  267 VMPKDQLYRQLEVELGEDWRSKFQEFDDVPIAAASIGQVHRATLLNGDRVAIKIQYPGVAQSIGSDLLNLKRLVTYTNILPRGLYIDEIIRVGEEELTAECDYVQEAANQERFKELIQQTGMAEQFI-VPRVYRELSTARILTTQLISGVAVDKAVHLSQDVRNSIGRRLLELTIHELFNWRFMQTDPNWSNFMYNASTDTIGLVDFGAAREYPKSFVDDYFNIVWAAANEDKKTLVD---------------------YSIKMRFLTGDESPAMMRAHVAAGMAVGEPF 534
[Close]
BLAST of mRNA_A-nodosum_M_contig1261.39.1 vs. uniprot
Match: A0A662XG01_9STRA (ABC1 domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XG01_9STRA)

HSP 1 Score: 301 bits (770), Expect = 1.120e-90
Identity = 160/294 (54.42%), Postives = 208/294 (70.75%), Query Frame = 3 
Query:    3 MMPLNQLYKQLEKSFGEDWRSKLSSFNETPIAAASIGQVHRARLLDGTEVAMKIQYPGVADSVESDLRNLQLLVKLTNILPPGLYIDEIIKVGREELSEECDYEKEAAHQERFRKLIE----ADEHLRKWATVPKVVPELLSKEVLTTHLAPGVPVDQILDMPQEVRNHVAKLMLRCTMYELFEWRFMQTDPN*GNFLFDRATGKMTLIDFGACREYNKKFVDGYFRLVWAAANRDEETILEARSLENDQ*KLLYGTLLHRIQVSQKLKFLTGDESRSMMDAHVKARLVVGEPF 872
            +MP +QL+KQLE   G+DWRS    F++ PIAAASIGQVHRA LL+G  VA+KIQYPGVA+S+ SDL NL+ LV  TNILP GLYIDEII+VG+EEL+ ECDY +EA +QE F +LIE    AD ++     VP+V  EL +  +LTT L  GV VD+ +++ Q+VRN +A+ +L+ T+ ELF+WRFMQTDPN  NF+++ +T  + L+DFGA REY K+FVD YF +VWAAAN DE+T+++A                     S KL FLTGDES +MM AH+ A +VVGEPF
Sbjct:  247 VMPKDQLHKQLESELGKDWRSNFQEFDDVPIAAASIGQVHRATLLNGDRVAIKIQYPGVAESISSDLLNLKRLVTYTNILPRGLYIDEIIRVGKEELTAECDYVQEADNQELFTQLIEQSGMADAYV-----VPRVYRELSTARILTTQLISGVAVDKAVNLSQDVRNGIARRILQLTIRELFDWRFMQTDPNWSNFMYNASTDTIGLVDFGAAREYPKEFVDDYFNVVWAAANNDEKTLMDA---------------------SLKLHFLTGDESPAMMRAHMAAGMVVGEPF 514
[Close]
BLAST of mRNA_A-nodosum_M_contig1261.39.1 vs. uniprot
Match: A0A329T3W1_9STRA (Protein ABC transporter 1 n=12 Tax=Phytophthora TaxID=4783 RepID=A0A329T3W1_9STRA)

HSP 1 Score: 300 bits (768), Expect = 1.990e-90
Identity = 158/290 (54.48%), Postives = 204/290 (70.34%), Query Frame = 3 
Query:    3 MMPLNQLYKQLEKSFGEDWRSKLSSFNETPIAAASIGQVHRARLLDGTEVAMKIQYPGVADSVESDLRNLQLLVKLTNILPPGLYIDEIIKVGREELSEECDYEKEAAHQERFRKLIEADEHLRKWATVPKVVPELLSKEVLTTHLAPGVPVDQILDMPQEVRNHVAKLMLRCTMYELFEWRFMQTDPN*GNFLFDRATGKMTLIDFGACREYNKKFVDGYFRLVWAAANRDEETILEARSLENDQ*KLLYGTLLHRIQVSQKLKFLTGDESRSMMDAHVKARLVVGEPF 872
            +MP +QL+ QL+   G+DWRS+   F++ PIAAASIGQVHRA LL+G  VA+KIQYPGVA+S+ SDL NL+ LV  TNILP GLYIDEII+VG+EEL+ ECDY  EA +QERF+KLIE +    K+  VP+V  EL +  +LTT L  GV VD+ + + Q+VR+ +A+ +L  T++ELF WRFMQTDPN  NF+++ +T  + L+DFGA REY K FVD YF +VWAAAN DE+T+++                      S K+ FLTGDES SMM AHV A +VVGEPF
Sbjct:  243 VMPKDQLHHQLKTELGDDWRSRFQEFDDVPIAAASIGQVHRATLLNGDRVAIKIQYPGVAESIGSDLLNLKRLVTYTNILPRGLYIDEIIRVGKEELTAECDYLTEADNQERFKKLIEQNGMGEKYV-VPRVYRELSTARILTTQLISGVAVDKAVHLSQDVRDSIARRILELTIHELFNWRFMQTDPNWSNFMYNASTDTIGLVDFGAAREYPKSFVDDYFNIVWAAANEDEKTLVD---------------------YSIKMHFLTGDESPSMMRAHVAAGMVVGEPF 510
[Close]
BLAST of mRNA_A-nodosum_M_contig1261.39.1 vs. uniprot
Match: A0A2D4BCP6_PYTIN (Atypical/ABC1/ABC1-A protein kinase n=3 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BCP6_PYTIN)

HSP 1 Score: 299 bits (765), Expect = 2.330e-89
Identity = 156/290 (53.79%), Postives = 202/290 (69.66%), Query Frame = 3 
Query:    3 MMPLNQLYKQLEKSFGEDWRSKLSSFNETPIAAASIGQVHRARLLDGTEVAMKIQYPGVADSVESDLRNLQLLVKLTNILPPGLYIDEIIKVGREELSEECDYEKEAAHQERFRKLIEADEHLRKWATVPKVVPELLSKEVLTTHLAPGVPVDQILDMPQEVRNHVAKLMLRCTMYELFEWRFMQTDPN*GNFLFDRATGKMTLIDFGACREYNKKFVDGYFRLVWAAANRDEETILEARSLENDQ*KLLYGTLLHRIQVSQKLKFLTGDESRSMMDAHVKARLVVGEPF 872
            +MP  QL+ QL    GEDWRS    F++ PIAAASIGQVHR  L  G  VA+KIQYPGVA+S+ESDL NL+ LV  TNILP GLYIDEII+VG+EEL+ EC+Y +EA +Q+RFR L+ A   +     VPKV  E  +  +LTT L  GVPVD+++++PQ VR+ +A+ +L  T+ ELFEWRFMQTDPN  NF+++ +T K+ L+DFGA REY K+FVD YF +VWAAAN DE+T+++                      S ++KFLTGDES +MM AH+ A +VVGEPF
Sbjct:  294 VMPKAQLHAQLADELGEDWRSLFKEFDDVPIAAASIGQVHRGTLATGERVAVKIQYPGVAESIESDLLNLKRLVTYTNILPKGLYIDEIIRVGQEELTLECNYSQEADNQDRFRNLVHASA-MSDAFVVPKVHREASTSRILTTELISGVPVDKVVNLPQPVRDSIARRILELTVRELFEWRFMQTDPNWSNFMYNSSTDKIGLVDFGAAREYPKEFVDDYFNIVWAAANEDEKTMMD---------------------YSIRMKFLTGDESPAMMRAHMMAGMVVGEPF 561
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1261.39.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPB9_9PHAE1.040e-13571.67ABC1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835YMK7_9STRA2.530e-9755.71Protein required for ubiquinone biosynthesis and f... [more]
A0A3M6VPM4_9STRA3.990e-9455.86ABC1 domain-containing protein n=1 Tax=Peronospora... [more]
A0A4D9DI78_9STRA2.150e-9254.11ABC1 domain-containing protein n=2 Tax=Monodopsida... [more]
H3GJS1_PHYRM2.640e-9154.14ABC1 domain-containing protein n=6 Tax=Phytophthor... [more]
A0A0P1AZD8_PLAHL7.020e-9153.10Atypical abc1 abc1-a protein kinase n=1 Tax=Plasmo... [more]
M4B4X6_HYAAE9.560e-9154.14ABC1 domain-containing protein n=1 Tax=Hyaloperono... [more]
A0A662XG01_9STRA1.120e-9054.42ABC1 domain-containing protein n=1 Tax=Nothophytop... [more]
A0A329T3W1_9STRA1.990e-9054.48Protein ABC transporter 1 n=12 Tax=Phytophthora Ta... [more]
A0A2D4BCP6_PYTIN2.330e-8953.79Atypical/ABC1/ABC1-A protein kinase n=3 Tax=Pythiu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1261contigA-nodosum_M_contig1261:222472..226417 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LRI9
Preferred nameADCK3
PFAMsABC1
Model size1833
Max annot lvl2759|Eukaryota
KEGG koko:K08869
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001655,GO:0001822,GO:0002064,GO:0003674,GO:0003824,GO:0004672,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006091,GO:0006119,GO:0006122,GO:0006139,GO:0006163,GO:0006464,GO:0006468,GO:0006725,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006753,GO:0006778,GO:0006787,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009653,GO:0009888,GO:0009987,GO:0010224,GO:0015980,GO:0015994,GO:0015996,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016462,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017144,GO:0019439,GO:0019538,GO:0019637,GO:0019693,GO:0019866,GO:0019898,GO:0021549,GO:0021575,GO:0021587,GO:0021680,GO:0021692,GO:0021695,GO:0021696,GO:0022037,GO:0022900,GO:0022904,GO:0030154,GO:0030198,GO:0030554,GO:0030855,GO:0030902,GO:0031090,GO:0031312,GO:0031314,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032194,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032835,GO:0032836,GO:0033013,GO:0033015,GO:0034641,GO:0035850,GO:0036094,GO:0036211,GO:0042180,GO:0042181,GO:0042440,GO:0042773,GO:0042775,GO:0043062,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043531,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045333,GO:0046034,GO:0046149,GO:0046483,GO:0046700,GO:0046777,GO:0048468,GO:0048513,GO:0048731,GO:0048856,GO:0048869,GO:0050896,GO:0051186,GO:0051187,GO:0051188,GO:0055086,GO:0055114,GO:0060322,GO:0060429,GO:0061005,GO:0061318,GO:0070013,GO:0071704,GO:0071840,GO:0072001,GO:0072006,GO:0072009,GO:0072010,GO:0072015,GO:0072073,GO:0072112,GO:0072310,GO:0072311,GO:0072521,GO:0097159,GO:0097367,GO:0140096,GO:1901004,GO:1901006,GO:1901135,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901661,GO:1901663
Exons9
Evalue3.31e-99
EggNOG OGsCOG0661@1|root,KOG1234@2759|Eukaryota
Descriptionubiquinone biosynthetic process
Cds size570
COG categoryZ
BRITEko00000,ko01001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1261.39.1prot_A-nodosum_M_contig1261.39.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1261 224642..226415 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866698.0539632-UTR-A-nodosum_M_contig1261:222471..2230631680866698.0539632-UTR-A-nodosum_M_contig1261:222471..223063Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1261 222472..223063 -
1680866698.0651855-UTR-A-nodosum_M_contig1261:223526..2239881680866698.0651855-UTR-A-nodosum_M_contig1261:223526..223988Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1261 223527..223988 -
1680866698.0773816-UTR-A-nodosum_M_contig1261:224298..2244771680866698.0773816-UTR-A-nodosum_M_contig1261:224298..224477Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1261 224299..224477 -
1680866698.0896306-UTR-A-nodosum_M_contig1261:224613..2246411680866698.0896306-UTR-A-nodosum_M_contig1261:224613..224641Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1261 224614..224641 -
1680866698.16492-UTR-A-nodosum_M_contig1261:226415..2264171680866698.16492-UTR-A-nodosum_M_contig1261:226415..226417Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1261 226416..226417 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866698.0983286-CDS-A-nodosum_M_contig1261:224641..2247311680866698.0983286-CDS-A-nodosum_M_contig1261:224641..224731Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1261 224642..224731 -
1680866698.109442-CDS-A-nodosum_M_contig1261:224982..2250421680866698.109442-CDS-A-nodosum_M_contig1261:224982..225042Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1261 224983..225042 -
1680866698.121763-CDS-A-nodosum_M_contig1261:225298..2253881680866698.121763-CDS-A-nodosum_M_contig1261:225298..225388Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1261 225299..225388 -
1680866698.1350858-CDS-A-nodosum_M_contig1261:225552..2256091680866698.1350858-CDS-A-nodosum_M_contig1261:225552..225609Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1261 225553..225609 -
1680866698.1441696-CDS-A-nodosum_M_contig1261:225948..2261071680866698.1441696-CDS-A-nodosum_M_contig1261:225948..226107Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1261 225949..226107 -
1680866698.1546414-CDS-A-nodosum_M_contig1261:226301..2264151680866698.1546414-CDS-A-nodosum_M_contig1261:226301..226415Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1261 226302..226415 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1261.39.1

>prot_A-nodosum_M_contig1261.39.1 ID=prot_A-nodosum_M_contig1261.39.1|Name=mRNA_A-nodosum_M_contig1261.39.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=190bp
MMPLNQLYKQLEKSFGEDWRSKLSSFNETPIAAASIGQVHRARLLDGTEV
AMKIQYPGVADSVESDLRNLQLLVKLTNILPPGLYIDEIIKVGREELSEE
CDYEKEAAHQERFRKLIEADEHLRKWATVPKVVPELLSKEVLTTHLAPGV
PVDQILDMPQEVRNHVAKLMLRCTMYELFEWRFMQTDPN*
back to top

mRNA from alignment at A-nodosum_M_contig1261:222472..226417-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1261.39.1 ID=mRNA_A-nodosum_M_contig1261.39.1|Name=mRNA_A-nodosum_M_contig1261.39.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3946bp|location=Sequence derived from alignment at A-nodosum_M_contig1261:222472..226417- (Ascophyllum nodosum dioecious)
ACATGATGCCCTTGAACCAGCTGTACAAGCAACTGGAAAAAAGCTTCGGA
GAAGATTGGAGAAGCAAGCTGTCCTCGTTCAACGAAACACCGATCGCCGC
TGCTAGCATTGGACAGGCGGGTTCACTTGATATTTGTGTAATACAGCGAC
ATACCCGGTACCCGTGACATCGAGGGACTCCCCCCTTCTCTCAGCCGTGT
AGTGCGAGCTTGCCCTGCGCCATTGCCTTTTGACCTACGAGCTTTTCAGC
CATTTAGCCTTTTGAACCTACCCCCCGACACCTGGGCCTCGACGCGGTCT
CACGACACAGGTGCACAGAGCACGCCTGCTTGATGGAACTGAGGTGGCTA
TGAAGATTCAATATCCCGGGGTGGCAGACAGCGTGGAGTCCGACCTTCGC
AACTTGCAGCTACTGGTGAAGCTTACGAACATCCTACCGCCGGGGCTATA
CATTGACGAAATTATCAAGGTACGCGCGTTCCGACCGCGCGATCACGATC
TCGTTTATCTCGTCCAGGCGTGTTTGCTTTACTCTTCGCTCATGACACCA
CCCAACGAAACCCCACCGCAAAATCTGAATCCAAAAGAATACGGCAGTCG
GACGTCGGGCATACTGACTTGTGACACCTGTCGTTAACACACTCATACTG
GTTAAGACACCGCTTTAAACGATTGAAGCAGGACTAGACACGTGTGCAAA
TGGCGAACGATTTCGAGCGGAGGTCGAGCGTTTTGTGACACGTTGGGCGC
TAAATAGAGAGTCGGCTCGAAGGTTCACACGACTTTTCACGTCTGTAACT
CTCACCAGGTCGGCCGAGAAGAGCTTAGCGAGGAGTGTGACTACGAGAAG
GAAGCAGCTCATCAGGTGCAGAACCACCGTCCTCGCGTCTGATAGTTAAG
GCGGTAAATTAGAGAGGGTTGAGGGTGAAATGTCTCCGTTCTTTGTCTCT
GGAAGATGGAAGGGTTTATAATATACCATACATAGAGATGAACTCGACCG
TCGATGTATGGATGCCTGTTTCTCTGCAGGAGCGGTTCAGAAAGCTGATC
GAAGCGGACGAGCACCTCCGAAAATGGGCGACCGTGCCGAAGGTGGTGCC
TGAGCTCCTGAGCAAAGAGGTCAGAGCCTATTGATGCGAAACGCCAGAAA
AGTACTCTTGCGTGGAAGGCATCTTGCGTCTCACTATCGCCCTTCGTTCT
CGCGAAGGCGATTGTCCCCTCCCCCAACCGTTGGCTAGAAGGTTTTCTTG
TCCGCTCTTTTGATTCTTTGCGTCATTAATGATCAATATTGAGGGTACCT
CACCCGGAAGGTCTCGACGAAGGTCTTGACGAAAAGCTTGAGGAATTCGG
TACCTCCTCGGCCTTTGACGTGCAGGTCCTGACGACGCATTTAGCGCCCG
GCGTCCCCGTCGATCAAATATTGGACATGCCTCAGGTCAGTCTCGGTGTC
CAATGTGTTTGTGTAATCGTCGCCTTGTGTCGCCATTACGGGGACGCCTT
GCAATACAAACGGATTGTTGAGTCGCGCAGGCGGAAATGCGACACAAGCT
TCGCTTGCCGAGACCCCACCGATGCCGCTCCAGAGACGGAGATTCAACTG
TGCGCCGTGATGAAATTCTCGACTCCGCACGACACACGAGTGATGTTGAT
ATGTCCTTGGTATCTCAAATGATGTACTCGAGGCAGGAAGTACGAAATCA
CGTGGCGAAGTTGATGTTGCGCTGCACGATGTACGAGCTGTTCGAGTGGC
GCTTCATGCAGACGGACCCCAACTGAGGCAACTTCCTCTTCGACCGCGCC
ACGGGTAAGCGCCCGGTGTCGCCTGACACACCCGGGGTTTCGTATGATAA
TGGTGTGATCGATGATTTGCTTGCGCGAGTGTATTTAAAACAGCATACAC
ACTTGAAGCTGTGTTTTGCGCCCGCTGGCCGTCGTTCCAGGCAAGATGAC
CCTGATCGACTTCGGGGCCTGTCGGGAATACAACAAGAAGTTTGTGGACG
GCTATTTCCGCCTTGTGTGGGCTGCCGCCAATCGCGACGAGGAAACCATC
TTGGAGGCACGTTCACTCGAGAACGATCAGTAAAAACTGCTCTATGGCAC
CTTATTACACAGAATCCAGGTTCGACTCGAACAGGAGTGCTGCCGCGTTT
CTCTCGCAGATCTTGACGCGATGCAACTTCGACTGGCTGTTGTACCCCTT
TTAAGCAAGGGTGCGTCGCCGACTAATGTGTCTCGTTTTTGTATGTAAAA
AAAAAGGTCGGGCGCTATACGAAGGTTTTATACTGCACCTGGTAGGTCTA
TAGCGACGGGAAGTGTATATTGGAAGGTCTCCCTTCGATCACCGCGCCCA
TAAGTTACTGGTGCTCGACTGCTACGTCTGAGCGTGTGGAGTTTGATTTC
GTTTAGTTTTGTGTGATTCAAATCACCAGGTCAGCCAGAAGCTCAAGTTC
TTGACTGGAGACGAATCCCGATCGATGATGGACGCGCACGTCAAAGCCCG
TCTCGTCGTCGGAGAGCCCTTCGTAAACAAGCGGGTGCCCCCTTGATACC
CTTGATGAAGAATCAAAGTGTCTTGTGAATTATTTAACAACGGCGGACAG
GATAGAGAAGAAAATAAATGCCGCTATTAAAGTTTGCCACGCTGATGGCG
TGTATTCCTATCATGCTTTGCAGCTGGACGGTCCGTCATTTTCCATCTCC
TCGAAAAGATCGCATTTGCAATGCTTTCCAATATATGTATTTTTTTTTCA
TGCCTAGAATCGTGATCATCAAAGCGCAACTTCCTCGTGTCCTTCTGTAA
TAACGCGCAGCAGACGAGAGCCGTTCGACTTCCATGGCAGTAACATCACC
TCCAGACTAAGCCAACATGGAGACACGTTCATGAAGCACAGGTGAGGAAT
ACTGTATGATATGATACTGGTACAACCCTAAAATCAACCTCAAAGCGAGT
TATTTTCCCCATCCACTCTCATCCACTCTCCAATCCAACGAAAGGCATAG
AACTACTGCTGTACTTTTTTTAGAACGTTACGTATTGGTTCGAGCTTACG
CTATATCTTCCTTGGAATCACTTCTTTTTGAGTTGGCGGTTACGTCGATT
GCCCGTTGTTACAATTGCCCTCTTCGGCTGTGTGGCGTCGGATTGGCGGG
GATAGGGGAGGGGGGGAAATTTAACGAAAACAAGAAATCGTTCGCACATC
ACGAACGCGGCCATGCTCACGCCCGACTCCAGATACAACGGTTTATGCCA
CAGTTGGAAGTGTCTCTCAAGGAACACGATCTGTTGAGGTCAAATTTGTC
TTGTGGGCATCAAACGCTCCACTATTTTAACATGTATCGTGTTTGTCGCG
CCAGGTTAACGCCACCGCCGCGTGAAGCGTACAGCCTGCACCGCAAGCTA
GCGGGGGCGTTCTTGATGAACATCAAGCTGAAGGCGGTGATTCACTGCAG
AGACATCCTGGAAGAGGTGCACAAGCGGTACACCATCGGATGAAGGGCTT
ATAGCCTTGAAGAACTTCATAATTTCAAATGGTTGGCAAACGTGGTATTA
TCATCAATAGGACTGAGTACAGAGGGAAAGATGTAGAAATCTTAGCTCTT
GAGAGAGACATTTTTTAGGTGTCGAAAGCAATTTTAAGGATTGATTTGCA
TCGCTGAGTATAGGGAGTTAGTTCAGCATGGGATACAAGTGTCGAGGACG
TCGTCGATTCGTATGCCATCCCATGGTACGAAACGGTTATTTCGTACTTT
TGGTGGTGAGAGCATCTCCGAACTTTTTCGATCGGAGATTCTAACCCTTA
GCTTTAGTATTAATATTAATGGCGCTCTTTTGTAATATTTTAATAGTAAA
GGACTATTATATTATATGTCTAGTACCGGAAGAGTACCTGGTACAGTAGT
TCCAGAAAATACGTGTAACTTGTCTGGTGGAGAACGAGGTGAAACC
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig1261:222472..226417-

>mRNA_A-nodosum_M_contig1261.39.1 ID=mRNA_A-nodosum_M_contig1261.39.1|Name=mRNA_A-nodosum_M_contig1261.39.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=570bp|location=Sequence derived from alignment at A-nodosum_M_contig1261:222472..226417- (Ascophyllum nodosum dioecious)
ATGATGCCCTTGAACCAGCTGTACAAGCAACTGGAAAAAAGCTTCGGAGA
AGATTGGAGAAGCAAGCTGTCCTCGTTCAACGAAACACCGATCGCCGCTG
CTAGCATTGGACAGGTGCACAGAGCACGCCTGCTTGATGGAACTGAGGTG
GCTATGAAGATTCAATATCCCGGGGTGGCAGACAGCGTGGAGTCCGACCT
TCGCAACTTGCAGCTACTGGTGAAGCTTACGAACATCCTACCGCCGGGGC
TATACATTGACGAAATTATCAAGGTCGGCCGAGAAGAGCTTAGCGAGGAG
TGTGACTACGAGAAGGAAGCAGCTCATCAGGAGCGGTTCAGAAAGCTGAT
CGAAGCGGACGAGCACCTCCGAAAATGGGCGACCGTGCCGAAGGTGGTGC
CTGAGCTCCTGAGCAAAGAGGTCCTGACGACGCATTTAGCGCCCGGCGTC
CCCGTCGATCAAATATTGGACATGCCTCAGGAAGTACGAAATCACGTGGC
GAAGTTGATGTTGCGCTGCACGATGTACGAGCTGTTCGAGTGGCGCTTCA
TGCAGACGGACCCCAACTGA
back to top