mRNA_A-nodosum_M_contig1260.2.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1260.2.1
Unique NamemRNA_A-nodosum_M_contig1260.2.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
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BLAST of mRNA_A-nodosum_M_contig1260.2.1 vs. uniprot
Match: A0A0L0G6T4_9EUKA (PEROXIDASE_4 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G6T4_9EUKA)

HSP 1 Score: 72.4 bits (176), Expect = 1.190e-13
Identity = 33/42 (78.57%), Postives = 33/42 (78.57%), Query Frame = 1 
Query:    1 VTLAYQCASTFRITDYAGGCNGARIRLYPQKTWASNVGMDLV 126
            V LAYQCASTFRITDY GGCNGA IR  PQK W  NVGMD V
Sbjct:  440 VHLAYQCASTFRITDYKGGCNGAAIRFVPQKDWPENVGMDKV 481
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BLAST of mRNA_A-nodosum_M_contig1260.2.1 vs. uniprot
Match: A0A6H5JP97_9PHAE (KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP97_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 2.950e-13
Identity = 32/42 (76.19%), Postives = 33/42 (78.57%), Query Frame = 1 
Query:    1 VTLAYQCASTFRITDYAGGCNGARIRLYPQKTWASNVGMDLV 126
            VTLAYQCASTFR TDY GGCNGARIR  PQ  WASN G+  V
Sbjct:  194 VTLAYQCASTFRSTDYMGGCNGARIRFPPQSEWASNAGLSTV 235
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BLAST of mRNA_A-nodosum_M_contig1260.2.1 vs. uniprot
Match: D8LN39_ECTSI (Catalase is an enzyme, present in all aerobic cells, that decomposes hydrogen peroxide to molecular n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN39_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 3.030e-13
Identity = 32/42 (76.19%), Postives = 33/42 (78.57%), Query Frame = 1 
Query:    1 VTLAYQCASTFRITDYAGGCNGARIRLYPQKTWASNVGMDLV 126
            VTLAYQCASTFR TDY GGCNGARIR  PQ  WASN G+  V
Sbjct:  520 VTLAYQCASTFRSTDYMGGCNGARIRFPPQSEWASNAGLSTV 561
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BLAST of mRNA_A-nodosum_M_contig1260.2.1 vs. uniprot
Match: A0A6H5JAJ7_9PHAE (KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAJ7_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 5.640e-13
Identity = 31/43 (72.09%), Postives = 34/43 (79.07%), Query Frame = 1 
Query:    1 VTLAYQCASTFRITDYAGGCNGARIRLYPQKTWASNVGMDLVR 129
            VTLA+QCASTFR TDY GGCNGARIR  P+K WA N G+D  R
Sbjct:  226 VTLAWQCASTFRSTDYLGGCNGARIRFSPEKDWAGNQGLDQAR 268
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BLAST of mRNA_A-nodosum_M_contig1260.2.1 vs. uniprot
Match: K3X7P5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7P5_GLOUD)

HSP 1 Score: 70.5 bits (171), Expect = 5.650e-13
Identity = 31/42 (73.81%), Postives = 34/42 (80.95%), Query Frame = 1 
Query:    1 VTLAYQCASTFRITDYAGGCNGARIRLYPQKTWASNVGMDLV 126
            V LA+QCASTFR+TDYAGGCNGA+IR  PQK W  N GMD V
Sbjct:  460 VNLAWQCASTFRLTDYAGGCNGAKIRFSPQKDWPLNAGMDEV 501
[Close]
BLAST of mRNA_A-nodosum_M_contig1260.2.1 vs. uniprot
Match: D7G7J0_ECTSI (Catalase is an enzyme, present in all aerobic cells, that decomposes hydrogen peroxide to molecular n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J0_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 7.720e-13
Identity = 31/39 (79.49%), Postives = 32/39 (82.05%), Query Frame = 1 
Query:    1 VTLAYQCASTFRITDYAGGCNGARIRLYPQKTWASNVGM 117
            VTLAYQCASTFR TDY GGCNGARIR  PQ  WASN G+
Sbjct:  459 VTLAYQCASTFRSTDYMGGCNGARIRFPPQSEWASNAGL 497
[Close]
BLAST of mRNA_A-nodosum_M_contig1260.2.1 vs. uniprot
Match: A0A0P1A5Y3_PLAHL (Catalase peroxidase hpi n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A5Y3_PLAHL)

HSP 1 Score: 67.0 bits (162), Expect = 1.040e-12
Identity = 29/42 (69.05%), Postives = 33/42 (78.57%), Query Frame = 1 
Query:    1 VTLAYQCASTFRITDYAGGCNGARIRLYPQKTWASNVGMDLV 126
            V  A+QCASTFRITDYAGGCNGA+IR  PQK W  N G+D +
Sbjct:  110 VHAAWQCASTFRITDYAGGCNGAKIRFAPQKDWPINAGVDKI 151
[Close]
BLAST of mRNA_A-nodosum_M_contig1260.2.1 vs. uniprot
Match: D7FTZ8_ECTSI (Catalase decomposes hydrogen peroxide to molecular oxygen and water n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ8_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 1.050e-12
Identity = 30/40 (75.00%), Postives = 33/40 (82.50%), Query Frame = 1 
Query:    1 VTLAYQCASTFRITDYAGGCNGARIRLYPQKTWASNVGMD 120
            VTLA+QCASTFR TDY GGCNGARIR  P+K WA N G+D
Sbjct:  419 VTLAWQCASTFRATDYLGGCNGARIRFSPEKDWAGNQGLD 458
[Close]
BLAST of mRNA_A-nodosum_M_contig1260.2.1 vs. uniprot
Match: A0A507FLQ5_9FUNG (Peroxidase n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FLQ5_9FUNG)

HSP 1 Score: 69.7 bits (169), Expect = 1.060e-12
Identity = 29/43 (67.44%), Postives = 34/43 (79.07%), Query Frame = 1 
Query:    1 VTLAYQCASTFRITDYAGGCNGARIRLYPQKTWASNVGMDLVR 129
            + LAYQCASTFR TDY GGCNGARIR +P+  W +N G+D VR
Sbjct:  449 IDLAYQCASTFRATDYKGGCNGARIRYWPESGWPANAGLDQVR 491
[Close]
BLAST of mRNA_A-nodosum_M_contig1260.2.1 vs. uniprot
Match: A0A3M6VV86_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VV86_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.060e-12
Identity = 30/42 (71.43%), Postives = 34/42 (80.95%), Query Frame = 1 
Query:    1 VTLAYQCASTFRITDYAGGCNGARIRLYPQKTWASNVGMDLV 126
            V  A+QCASTFR+TDYAGGCNGARIR  PQK WA N G+D +
Sbjct:  457 VHAAWQCASTFRMTDYAGGCNGARIRFLPQKDWAVNAGVDTI 498
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1260.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0L0G6T4_9EUKA1.190e-1378.57PEROXIDASE_4 domain-containing protein n=1 Tax=Sph... [more]
A0A6H5JP97_9PHAE2.950e-1376.19KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LN39_ECTSI3.030e-1376.19Catalase is an enzyme, present in all aerobic cell... [more]
A0A6H5JAJ7_9PHAE5.640e-1372.09KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
K3X7P5_GLOUD5.650e-1373.81Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
D7G7J0_ECTSI7.720e-1379.49Catalase is an enzyme, present in all aerobic cell... [more]
A0A0P1A5Y3_PLAHL1.040e-1269.05Catalase peroxidase hpi n=1 Tax=Plasmopara halsted... [more]
D7FTZ8_ECTSI1.050e-1275.00Catalase decomposes hydrogen peroxide to molecular... [more]
A0A507FLQ5_9FUNG1.060e-1267.44Peroxidase n=1 Tax=Chytriomyces confervae TaxID=24... [more]
A0A3M6VV86_9STRA1.060e-1271.43Uncharacterized protein n=1 Tax=Peronospora effusa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1260contigA-nodosum_M_contig1260:7590..7730 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog72019.SARC_03049T0
Preferred namekatG
PFAMsperoxidase
Model size141
Max annot lvl33154|Opisthokonta
KEGG rclassRC00034,RC00213,RC00767,RC02141
KEGG koko:K03782
KEGG ReactionR00602,R00698,R02596,R02670,R03919,R04007,R07443,R11906
KEGG Pathwayko00360,ko00380,ko00940,ko00983,ko01100,ko01110,map00360,map00380,map00940,map00983,map01100,map01110
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000003,GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009266,GO:0009267,GO:0009408,GO:0009605,GO:0009628,GO:0009636,GO:0009987,GO:0009991,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0019953,GO:0020037,GO:0022414,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034599,GO:0034605,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042594,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051704,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0071496,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748
Exons1
Evalue1.95e-14
EggNOG OGsCOG0685@1|root,2QTDY@2759|Eukaryota,39TPQ@33154|Opisthokonta
EC1.11.1.21
Descriptioncatalase activity
Cds size141
COG categoryQ
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866697.0591102-CDS-A-nodosum_M_contig1260:7589..77301680866697.0591102-CDS-A-nodosum_M_contig1260:7589..7730Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1260 7590..7730 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1260.2.1prot_A-nodosum_M_contig1260.2.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1260 7590..7730 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1260.2.1

>prot_A-nodosum_M_contig1260.2.1 ID=prot_A-nodosum_M_contig1260.2.1|Name=mRNA_A-nodosum_M_contig1260.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=47bp
VTLAYQCASTFRITDYAGGCNGARIRLYPQKTWASNVGMDLVRVSNS
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mRNA from alignment at A-nodosum_M_contig1260:7590..7730-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1260.2.1 ID=mRNA_A-nodosum_M_contig1260.2.1|Name=mRNA_A-nodosum_M_contig1260.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=141bp|location=Sequence derived from alignment at A-nodosum_M_contig1260:7590..7730- (Ascophyllum nodosum dioecious)
GTGACGTTGGCTTACCAATGTGCCTCGACCTTCCGCATCACTGACTACGC
GGGCGGCTGTAATGGCGCGAGAATCCGACTCTATCCGCAAAAAACTTGGG
CCAGCAATGTCGGCATGGATTTGGTGCGCGTCTCGAATTCG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1260:7590..7730-

>mRNA_A-nodosum_M_contig1260.2.1 ID=mRNA_A-nodosum_M_contig1260.2.1|Name=mRNA_A-nodosum_M_contig1260.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=141bp|location=Sequence derived from alignment at A-nodosum_M_contig1260:7590..7730- (Ascophyllum nodosum dioecious)
GTGACGTTGGCTTACCAATGTGCCTCGACCTTCCGCATCACTGACTACGC
GGGCGGCTGTAATGGCGCGAGAATCCGACTCTATCCGCAAAAAACTTGGG
CCAGCAATGTCGGCATGGATTTGGTGCGCGTCTCGAATTCG
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