mRNA_A-nodosum_M_contig123.4.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig123.4.1 vs. uniprot
Match: A0A6H5JW02_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW02_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 5.030e-18 Identity = 71/222 (31.98%), Postives = 103/222 (46.40%), Query Frame = 1
Query: 4 AGQVDYYGLHQLFLTERALYVLVWNASKFLGK-----HEALSDELKDWLATLHLRAPQSTVLLCGTHKDKCVPLNIFEKSQALHKRSPSIGKTLQDVEESVNQKHKEWKQDRREGHTNRDEELELVSGIQLVSSSPTLRYRDSGLLVLQAKLITYGTGIRWWIPPSWRLALVVLDAVRDEIAPVEAARLFVEDLPQPQ----QTGKRTWIARKDLSRHWETV 642
AGQVDYYG+HQ FLT RALY+LVW+ + GK E + ++ WL LHLRAP STV+L D + F + A+ VEE V KEW++ R T D ++ ++ LVS + ++ I + +PP+W LAL LDA+RD P +A R + +P+ + R++ L W+ V
Sbjct: 281 AGQVDYYGMHQNFLTRRALYLLVWDVLRCHGKTDDDLDEVIFQDIMRWLYVLHLRAPGSTVILVANKCDGSI--EDFTGTAAV-------------VEERVAVLRKEWRKARGFSSTRMDMDMTVLERSSLVSCLDGVGLQE------MIDRIAAQSAASMRVPPAWGLALTFLDALRDSRDPQQACRDCLSLGSRPKVGADREPGRSFFTENSLVEQWKGV 481
BLAST of mRNA_A-nodosum_M_contig123.4.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 1.300e-17 Identity = 70/192 (36.46%), Postives = 96/192 (50.00%), Query Frame = 1
Query: 4 AGQVDYYGLHQLFLTERALYVLVWNASKFLGKH-----EALSDELKDWLATLHLRAPQSTVLLCGTHKDKCVPLNIFEKSQALHKRSPSIGKTLQDVEESVNQKHKEWKQDRREGHTNRDEELELVSGIQLVSSSPTLRYRDSGLLVLQAKLITYG-TGIRWWIPPSWRLALVVLDAVRDEIAPVEAARLFV 561
AGQVDYYG+HQ FLT RALY+LVW+ S+ GK + +S+++ WL LHLR P S VLL D + +G T VE S ++ +EW+ +R+ + L ++ LVS GL + A++ G T I +PPSW LAL LDA+RD P A R F+
Sbjct: 443 AGQVDYYGMHQTFLTRRALYLLVWDVSRCHGKESNDLDKVVSEDIMKWLYALHLRVPGSAVLLVANKCDGSL--------------QEFVG-TAGAVESSARRQLQEWQGNRKSPGVTK---LTILQQPSLVSCDD-----GGGLSEVIARVDAQGATSIV--VPPSWGLALAFLDALRDSRDPEPATRRFL 609
BLAST of mRNA_A-nodosum_M_contig123.4.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 4.070e-17 Identity = 77/223 (34.53%), Postives = 111/223 (49.78%), Query Frame = 1
Query: 4 AGQVDYYGLHQLFLTERALYVLVWNASKFLGKHE---ALSDELKDWLATLHLRAPQSTVLLCGTHKDKCVPLNIFEKSQALHKRSPSIGKTLQDVEESVNQKHK-EWKQDRREGHTNRDEELELVSGIQLVSSSPTLRYRDSGLLVLQAKLITYGTGIRWWIPPSWRLALVVLDAVRDEIAPVEAARLFVEDLPQP------QQTGKRTWIARKDLSRHWETV 642
AGQVDY G+HQ FLT RALY+LV + +K+ G + A+ D++ WL L+LRAP STV+L D + E ++ + +R V E V H+ + R +GH +L L+ G+ VS SGL L A LI+ +PP+W LAL V+ A+R P+ AAR + LP P +I++ +LSR W +V
Sbjct: 128 AGQVDYAGMHQTFLTRRALYLLVVDITKYHGVDDLDKAIHDDIMRWLYYLYLRAPGSTVVLVANKCDGSID-KFAETAERIQRR----------VRELVAVWHEARGLRGRSKGHVT---DLTLLPGMSRVSCQEKGSPEASGLPALIA-LISRQAATAIHVPPAWDLALEVIGALRASCNPIAAARDKL-GLPNPLPADGVADVHAFAFISKDELSRKWRSV 334
BLAST of mRNA_A-nodosum_M_contig123.4.1 vs. uniprot
Match: A0A8B7DGY2_HYDVU (leucine-rich repeat serine/threonine-protein kinase 2-like n=1 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B7DGY2_HYDVU) HSP 1 Score: 68.9 bits (167), Expect = 1.040e-9 Identity = 38/80 (47.50%), Postives = 49/80 (61.25%), Query Frame = 1
Query: 4 AGQVDYYGLHQLFLTERALYVLVWNASKFLGKHEALSDELKDWLATLHLRAPQSTVLLCGTHKDKCVP-----LNIFEKS 228
AGQ D+Y H+ FL+ RALY+ V+NASK G+ E +L WL + + AP S V+L GTH DKC+ LN F KS
Sbjct: 522 AGQEDFYSTHRYFLSSRALYLAVYNASK--GEEEL--KKLTPWLLNIQIVAPYSKVILVGTHADKCIQENLQSLNAFTKS 597
BLAST of mRNA_A-nodosum_M_contig123.4.1 vs. uniprot
Match: UPI001F5F513F (leucine-rich repeat serine/threonine-protein kinase 2 isoform X1 n=4 Tax=Hydra vulgaris TaxID=6087 RepID=UPI001F5F513F) HSP 1 Score: 68.9 bits (167), Expect = 1.060e-9 Identity = 38/80 (47.50%), Postives = 49/80 (61.25%), Query Frame = 1
Query: 4 AGQVDYYGLHQLFLTERALYVLVWNASKFLGKHEALSDELKDWLATLHLRAPQSTVLLCGTHKDKCVP-----LNIFEKS 228
AGQ D+Y H+ FL+ RALY+ V+NASK G+ E +L WL + + AP S V+L GTH DKC+ LN F KS
Sbjct: 1009 AGQEDFYSTHRYFLSSRALYLAVYNASK--GEEEL--KKLTPWLLNIQIVAPYSKVILVGTHADKCIQENLQSLNAFTKS 1084
BLAST of mRNA_A-nodosum_M_contig123.4.1 vs. uniprot
Match: UPI001EE58317 (leucine-rich repeat serine/threonine-protein kinase 2-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE58317) HSP 1 Score: 66.2 bits (160), Expect = 8.540e-9 Identity = 33/87 (37.93%), Postives = 51/87 (58.62%), Query Frame = 1
Query: 4 AGQVDYYGLHQLFLTERALYVLVWNASKFLGKHEALSDELKDWLATLHLRAPQSTVLLCGTHKDKCVPLNIFEKSQALHKRSPSIGK 264
AGQ ++Y HQ FL+ RALY++V++ SK L + D LK WL+ +H RAP V++ GTH DK P + ++ + + + K
Sbjct: 698 AGQEEFYSTHQCFLSNRALYLVVYDVSKGLEE----IDRLKPWLSNIHFRAPGCPVIVVGTHFDKLNPEHAADQIDGMEAKLYELSK 780
BLAST of mRNA_A-nodosum_M_contig123.4.1 vs. uniprot
Match: UPI0001CBABD9 (leucine-rich repeat serine/threonine-protein kinase 1-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBABD9) HSP 1 Score: 66.2 bits (160), Expect = 8.640e-9 Identity = 32/65 (49.23%), Postives = 44/65 (67.69%), Query Frame = 1
Query: 1 LAGQVDYYGLHQLFLTERALYVLVWNASKFLGKHEALSDELKDWLATLHLRAPQSTVLLCGTHKD 195
LAGQ +YY +HQ FLT LY++VW+ + LG+ D+L+ WL+ +H RAP S V+L GTH D
Sbjct: 770 LAGQPEYYVIHQCFLTPNTLYMVVWDLT--LGEEGI--DQLEPWLSNIHARAPDSMVILVGTHLD 830
BLAST of mRNA_A-nodosum_M_contig123.4.1 vs. uniprot
Match: A0A2T7NTI5_POMCA (Non-specific serine/threonine protein kinase n=3 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NTI5_POMCA) HSP 1 Score: 65.9 bits (159), Expect = 1.180e-8 Identity = 34/68 (50.00%), Postives = 42/68 (61.76%), Query Frame = 1
Query: 4 AGQVDYYGLHQLFLTERALYVLVWNASKFLGKHEALSDELKDWLATLHLRAPQSTVLLCGTHKDKCVP 207
AGQ D+Y HQ FL+ R LY+ V++ S LG E D LK WLA +H RAP V++ GTH DK P
Sbjct: 1407 AGQEDFYSTHQCFLSNRTLYLGVYDIS--LGTDEV--DRLKPWLANIHARAPGCPVIIVGTHYDKMAP 1470
BLAST of mRNA_A-nodosum_M_contig123.4.1 vs. uniprot
Match: A0A1I8AFB0_9BILA (Non-specific serine/threonine protein kinase n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I8AFB0_9BILA) HSP 1 Score: 64.7 bits (156), Expect = 2.890e-8 Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 7 GQVDYYGLHQLFLTERALYVLVWNASKFLGKHEALSDELKDWLATLHLRAPQSTVLLCGTHKDKCV 204
GQ +YY HQ FL+ R+LYV+VW AS +A +++ WL + RAP STV++ GTH D+ V
Sbjct: 1034 GQREYYATHQYFLSRRSLYVVVWKASD----GDAALNDVHQWLVNIQARAPNSTVIIVGTHYDQVV 1095
BLAST of mRNA_A-nodosum_M_contig123.4.1 vs. uniprot
Match: UPI001EAFAFD8 (leucine-rich repeat serine/threonine-protein kinase 2-like n=2 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EAFAFD8) HSP 1 Score: 64.7 bits (156), Expect = 2.900e-8 Identity = 32/68 (47.06%), Postives = 44/68 (64.71%), Query Frame = 1
Query: 4 AGQVDYYGLHQLFLTERALYVLVWNASKFLGKHEALSDELKDWLATLHLRAPQSTVLLCGTHKDKCVP 207
AGQ ++Y HQ FL+ RALY++V++ S+ G E D LK WL+ +H RAP V++ GTH DK P
Sbjct: 1461 AGQEEFYSTHQCFLSNRALYLVVYDVSR--GPEEI--DRLKPWLSNIHFRAPGCPVIVVGTHFDKLDP 1524 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig123.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig123.4.1 >prot_A-nodosum_M_contig123.4.1 ID=prot_A-nodosum_M_contig123.4.1|Name=mRNA_A-nodosum_M_contig123.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=241bp LAGQVDYYGLHQLFLTERALYVLVWNASKFLGKHEALSDELKDWLATLHLback to top mRNA from alignment at A-nodosum_M_contig123:95842..96888- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig123.4.1 ID=mRNA_A-nodosum_M_contig123.4.1|Name=mRNA_A-nodosum_M_contig123.4.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1047bp|location=Sequence derived from alignment at A-nodosum_M_contig123:95842..96888- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig123:95842..96888- >mRNA_A-nodosum_M_contig123.4.1 ID=mRNA_A-nodosum_M_contig123.4.1|Name=mRNA_A-nodosum_M_contig123.4.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=723bp|location=Sequence derived from alignment at A-nodosum_M_contig123:95842..96888- (Ascophyllum nodosum dioecious)back to top |