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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 204 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Cds size | 168 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866655.6061385-UTR-A-nodosum_M_contig1227:201520..201554 | 1680866655.6061385-UTR-A-nodosum_M_contig1227:201520..201554 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1227 201521..201554 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866655.6147103-CDS-A-nodosum_M_contig1227:201554..201597 | 1680866655.6147103-CDS-A-nodosum_M_contig1227:201554..201597 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1227 201555..201597 - |
| 1680866655.6264024-CDS-A-nodosum_M_contig1227:210419..210544 | 1680866655.6264024-CDS-A-nodosum_M_contig1227:210419..210544 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1227 210420..210544 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1227.29.3 >prot_A-nodosum_M_contig1227.29.3 ID=prot_A-nodosum_M_contig1227.29.3|Name=mRNA_A-nodosum_M_contig1227.29.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=56bp
TNPKDASRAAASPKPNAVAKANHGRGRTASRTWISGSAGSPRYEGDMSLL
DAPDA* back to topmRNA from alignment at A-nodosum_M_contig1227:201521..210544- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig1227.29.3 ID=mRNA_A-nodosum_M_contig1227.29.3|Name=mRNA_A-nodosum_M_contig1227.29.3|organism=Ascophyllum nodosum dioecious|type=mRNA|length=9024bp|location=Sequence derived from alignment at A-nodosum_M_contig1227:201521..210544- (Ascophyllum nodosum dioecious)
ACTAACCCCAAGGACGCAAGCCGGGCAGCCGCGAGCCCGAAGCCTAACGC
TGTGGCCAAGGCGAACCACGGCAGGGGGAGGACAGCTTCTCGAACATGGA
TATCCGGGTCGGCAGGATCACCAAGGTAAGGATGTAATGTCATGTCATGT
CGTGGAAAAAGGGCGGAAAAGGTCATGGAGCGATGCGGGGGAGGTACCTG
AAAGATTAGGAGCATGGACGTTCTCGGCATTGGAGCTTTCAACTTTCAAC
CCCGTCATTGACGTGCCGCACTGTTGACGCTGGCCAGCGCGTGATCCCTG
TGGTACTACAGGATATACCCCTGCTACCGGTATTAATTCTTGTCTGCTGT
ACTGTGCTGTGCTGTATAAACTCATGAATAGGTTTGGAACCACGAGAACG
CGGATCGGCTGTATTGTGAGGAAATCTCGACAGTATCCTGTAACCTTGAT
ACGACCTAAGCGCCTACGATTCTACGACTACGAGCACAACTAAGATTCCA
ACGCAAATTCAAGTGTCACCATGGATTGTCACAGGATCACCACGCATCCG
CGTCGGAATCGGCGCCCCCATTTTGATGAGAGCCGCTCGCACTGAGTTCC
ATGATGTATGACTGGAGTTCACGCAGGGTTGAGTTATCCATGGTATCGAT
GTCGACTTCAATTTCTTCGTCGGCGCTTCCTAGAGGCATGCTTGCTTAGA
TTATCTCGATGACACGAGTGAGGTGGTCCTAGATTATCTCGATGACACGC
TTAGGGCCCTCTTTTCATCGAAAGTCATGGGAACAGCCGTATTCGCCGCT
GCCGCCGCCGCGGTCCTGGCCTGCGCTTCGGCCCTAGCTGTCGCGGCCGC
AGTCTTGGAGGACTTGCCACCTCTGCCGCCTTTCGTGGGCTTGTCTGCCG
GAGCCTTTTCAGACTTGGCGCCTCTGTTCCCACCTTTCTTGGACCCCCCG
CCCTTCTTGTTCCCGGCCTTCGCTGCGCCGCCCTTCGATTTCTTTTTGGA
AGCTGGACTCGATTCTTTTTGGAGAGGTTCCGGCTACATGAGATCAAGAT
AGGTCCACGAGGGGTATAACGGCGTGCGGAGAGGGCTTCTCATCATGGAA
GGCGCAAACTAACTGTACCCCATCTACAACATTACTAAAACAGTATCTCC
ACTACTTGTATAGAGCTAAGTACCTAAGTACCGTTAAGAAAGCGAGCATA
AAACCGAGCATAAACAGAAAAAAAAAGCTGCAGGCATGTTTCTATTTTGA
GCATAAGTCGAACGGAAAAAAAACAGGCATTATGCGTCAGGGCTTACTCC
ACCTATGGCCGGGCAGAAGACCTAACAGCGGCGAAACGCTCTCTTACGCT
GCTCTCTCGCGCCTCTCAATTGTTCAACACAACAAACCGCGGAAAAGTTG
TTTATCTCATTTCGATTTCTATTTGAACACAACCAAACGTTTTATACGTC
ATCCTCACCTGGCTTGGAGCAACAACACCCGCAGCGGCGGCGGCTGCGGT
GATCCGGAGAATTTGCGCCTCCATTTCGGCCATACGGCGCTGCATCCGTT
CCAGCTTGACCTCGGCGGTGTCATTGTTGGAGGCGCACTCCTCCATCGCC
GAAGGAGCGACGGCCGCGGGATGTGGATCAGCAACCGGTGCTGATGCTAG
ATGCGGAGAGGCTGCCTTTGACGCGGGGGTTGAGCGGGCCTTCTTGGCCC
CAGACTTTCCTCCCCTCTGTCCACCCTCCCCGCTGCCACCGCCGTCGCCA
GAGCTCTTTCGTTTCTTTTCGAGTCGAGCGTCTGGTCCTGCCGCGTTGCT
TGAAGCGCCAGAACTTCCGCCGCCGTGGGACTTCCTCCGCTTGGAGGGAG
GGTCGTCGAGGTTCGACCCGAGTGCAGCGAACTTCCTCTCGAACGTCTCG
AACAGATCTCTCCTATCCCATGAGCCTTGTTCACGTCGCAGCCAGAGATC
TGTTCGAGACGTTCGAGAGGAAGTTCGCTGCACTCAGATCCAACCTTGAC
GACCCTCCCTCCAAGCGGAGGAAGTCCAACGGCGGCAGAAGTTCTGGCGG
TTCCAGCAACGTGGCAGGACCAACGTTCGACTCGATTCAGGAGATAAGAA
ACGCAAGAGCTCTGGCGACGGCGGTGGCAGCGGGGAGGGTGGACAGAGGG
GAGGAAGGTCTGAGGCTAAGAAGGCCCGCTCAGCCCCCGCGTCAAAGGCA
GCCTCTCCGCATCTGGCATCAGCACCGGTTGCTGATCCACATCCCGCGGC
CGTCGCTCCTTCGGCGATGGAGGAGTGCGCCTCCAACAATGACACCAACT
TTTCCGCGGTTTGTTGTGTTGAACAATTGAGAGGCGCGAGAGAGCAGCGT
AAGAGAGCGTTTCGCCGCTGTTAGGTCTTCTGCCCGGCCATAGGTGGAGT
TAGCCCTGACGCATAATGCCTGTTTTTTTTCCGTTCGACTCATGCTCAAA
ATAGCGAAACATGCCTGCAGCTATTGCTTTTTCCCGGTGCTTATGCTCGC
ACTTATGCTCGCTTTCTTAACGGTACTTAGGTACTTAGCTCTATACAAGT
AGTGGAGATACTGTTTTAGTAATGTTGTAGATGGGGTACAGTTAGTTTGC
GCCTTCCATGATGAGACGCCCTCTCCGTACGCCGTTATACCCCTCGTGGA
CCTATCTTGATCTCATGTAGCCGGAACCTCTCCAAAAAGAATCGAGTTCA
GCTACCAAAAAGAAATCGAAGGGCGGCGCAGCGAAGGCCGGGAACAAGAA
GGGCGGGGGGTCTAAGAAAGGTGGGAACAGAGGCGCCAAGTCTGAAAAGG
CTCCGGCAGACAAGCCCACGAAAGGCGGCAGAGGTGGCAAGTCCTCCAAG
ACTGCGGCCGCGACAGCTAGGGCCGAAGCGCAGGCCAGGACCGCGGCGGC
GGCAGCGGCGAATGCGGCTGTTCCCATGACTTTCGATGAAAAGAGGGTCC
TAAGCGTGGCCATCAACACTCTCGACCAGGACCACCTCACTCGTGTCATC
GAGATAATCCAGGCAAGCATGCCTCTAGGAAGCGCCGACGAAGAAATTGA
ACTCGACATCGATGCCATGGATAACTCGACCCTGCGTGAACTCCAGGCAT
ACATCATGGAACTCAGTGCGAACGGCTGTCATCAAAATGGGGGCGCCGAT
TCCGACGCGGATGCGTGGTGATCCTGTGACAATCCATGGTGACACTTGAA
TTTGCGTTGGAATCTTAGTTGTGCTCGTCGTAGGATCATAGGGGCTTAGG
TCGTATCAAGGTTACAGGATGCTGTCGAGATATAGTAGTGGTTTATGACG
AAAAGTATTGGATGCCGCCGCGCTCCTTTTTCGATTCGCTGAGTTCGGAG
AGGAAGCTGAGCTCTACTCGTTTTTGCACTTACACTGCGTGCACCCTCAC
ATGACATGAGACATCATATCATATGACATGCACCGCAATGGTGCAACGAG
GTGCGGCACGCACGGAACATTGGAATATTTTCGTTTCAAGACACTTGGTT
GACGCTTTTCTGTTGAGAGATCATTTTCCTCGCGCCCGAGTTAAAAAAGA
AACAAAAAAGGGAAAAAAGAGTTGCTAGGAAAGAAAAAAAAAATCGAAGG
GGTTCTTGCAACACACGTGACATGTTTGTGTACTGTGTACCTGGTATGTG
TATGTATATTTGTGAGAATGCGCTCGTGCGTGTCTGGGTGATGGTGTGTG
TATGTTTTATGTGTCGCATGTTTGTGTGATAACACTGCAGTAATGTGTGG
AGGAGAGCCCTCATGGGCCGATGATAAGTCTGTGGCATAACTGGGGGGCG
GATGTGGCCGTATCTGTGGTTGGCCATCCTCGCCCGCCTCTTTACTCGTT
TGTCGCTGGCGAGCGTGACGTGTTGCTGGGCTGGGCGGGGTTCGGGATGA
CGGGGAATATTTCGCACGACTCGGGTCAAGCCATCGTGTTCTGTGGTTGG
GCCGAGAGCGGCGAATGCCGTGCGTGCGATTATTTTCTTATTTCTTCTGT
GGTATATTTGGGGGAGAGGAGAATTTGAACGAGTTGAGAGGGTCGATTGA
TGGCGAGCGTCCGGTGTGTCCGGTGTGTCACCCCTTGCGTGGGTGGGGGG
GGGGGGAGGGGGGGATCGCTTCTGAGGCCTTAGATTTCAGGACGAACGAG
GTCCCGTATCTTACCTCCACCTTCTCCCCCCTCCCTCGAATCCGTCAAAT
TAGTCAATCTGCAGTCACATTTTTGTCGATAAAACGCGCCGGCTTCGTCG
CTAGGACTTGACCAGGCATGCCTCAGCTCCCTGGTGTCCCAACTGTGGAA
CTAATGGCCCACTGTCTGCCTCTTGTGACGTGAATCGTTCAGTCAGTAGA
GGCAACTAGTTCCTGAACCGCGCTAACGGCAAGAAAATCAAGGAAGCAAT
TGGCACCTTTTTTAGGTCTGCAGCTACGGTGCAGTTTGGCGAGGTATTCT
GAGAAGGTGGAAGTAGCCACCAAGAGTCGAGAGTAACAGCTGTTGTTGAT
GCCAGCAAGTGGGGGCAGTAAGCTGCGGGGTGTGTGAGGTATCATTACTC
GTGCCAATGCCAATGAGTGCAGTCAGTCACGGCGTAGTAAGGAAAAAAAC
GAACGTTGATATTGGTACCCAGCACGGTACATGAAATCGTATCTGTGATG
AGAGAGAGACTTGCCAAAAGAGGAAGGAAAGGAAAGAGGGTGTTCTGTAC
TAATATTGCGTGGGTGGGTGGTAATTTTGTTGCGTGGTGGTGTGGTGGTT
TCATTGGTAACAAAGGGGCGAAGGTGACCCGTGACCATTTGATGTTTGTA
ACAACACAGTAATAAAGGGATGAAGGTGTCCCGTGACCATTATTTGATGT
TTGTAACAAAATGCGCTCGCTGCAGGGGGACTCGAGGTGTTTTTCCCACC
ATGATCGTGGTCGCCAAAAGTCGCAACTGGGTGCTGCTGCCAATCCTGGT
CGTGGTCAGCTGAACAGGGAAACATACTTTCGCCCCGGTGTTTCAGTTGG
GTAACCTCGAAGCCTTCTGACGTTGGGACGTGAGTTCGAGTCTCGGTGCA
GTCGCACGAACTGGGATTTTTCCTCACAAAAAATAATAAACAAAAATGCC
CAACAACTGGAGAACGATTAGTTCGTGGGTACACAAAACTCGACTTCACG
GTCGACGGGGGAAAGGAACGGCTGAATTCTTCTCGCGAGAAAAATTAAGG
CACGCACCACAGAAAGAAGGCGGATAAATCCTATGTGACCTTCCTCCTGG
CTGACTTCGGCTGGTACGTCCACAAGCCTGACGCCCAGAATAAATAGGAT
GACAACACACACACACACACACTTGTCCCACTCGCGTCTGAGATGGTCTC
GCGAGACAGATTTGGATGCCCATCCTTCGTCACCCCTTCCTTATTCTTCA
CACCCAGGGTGAATCTCTCTGAAACTCTCTGAATCTCTCTGCTGGTGCTT
ACTCATGAGCTTCTCTTCTCTAAACCTACACCGTCAAATACCATCGCTTA
TTCCCGAATATGTATGGGGTCAAGCAAATGCGTACCAATGGCGTTCACCG
CCGAGAGTCTGCCGGCACAGGGCCACGTGGACCAATCAATGATCGCCCCT
TTTTTTATCTCACTTCTACTACAGTATTATTAATATGAATGCTATTAGAG
AGGTACTACAACTGTAGGTATAGAAACGTTTGATTGGAATTGGCGTTAGG
ATTTGTTTGATGTTTTTGTTTATTCGATGTTTTGCCGCGTCTTGTCGTGC
CACTACCACTAAGACAGGAGAGCTAGCTGTGTTGCGGATTCCACCACTTG
TGATCTTGTCTGTAAAGGGGTAGACTAGCTCTATACGAACGTTCTTTTTT
CACGCACACTAGAGAAGGGAGAAGCTGCAATTTTTCCCTTGCTCTCCAAG
AAAAATTAAAATTAAAAGCCCCAGCAGACCGCGGTTTCAAAGCCTTCATC
CTGCGGCGATAGGGCGTACGGCTTTAATAGCCAAAGCAAAGAAAGAACAA
GGCAGCATCGCAACACACTGATCGACACCTTTTGCCGTGTCCGGCGCTAC
ATAAGACAAGCGAGAGTACGACAACCGCCTCATATACTTGTAGAAATCCC
ATATTTTAGAGTATATACCATCACCCCTCCGTTCTCGGGCGCAACTCCTC
TGGCAGTTCCTGATCCTCCAGCCAATCGCCGAACTCCTTTTATCGTTCCT
CCTGAGCGGAAGGATAGCAAAACGCACGATCGGACGGCGGCAGCACGGAT
CTTCAGACAGAGAGCAACAGAGAACAAATGATCGCTCACGTAAGAGTACT
CTTATAGAATGGCTCTCGAAACGCAACATCCTGGTTTTCAATACAACGGG
GAAATCCGACATTTTCGACTGGGTTTGAGCTTCCCGTCATAACGAACGCC
GAGGAGGGAGGGGACGGAGGGGGGTTAGCCCCGGGTCACGATAACATATT
GACTAGCGGGGAACTCCCCCCTGTCATTTCGAAAATTTAGGGGAAAACAA
TTCAAAGGATGAAGCAGCTACTAATACTGTACTCGGTACTCCCGGAAACC
ACTGCATTGTGCATTGTGTCTCGTAGCGCCAGCAGTAGTCGCCTATCTCC
CCTCTCCCCTCTACCTCCCCCCTCCCAGATTATTTTCTTACATCTTCCTT
GTCATCCTCTTCTTTCTTGACCGTGTAGTTAGTTACACCATCCCAGAAGT
GACAGGACAGCTTTCTCCCGCCGAAGAAGCGACCGTCGAACGCCTTGATG
CACTCAGAAGCCCCGTAGACCGTTCCAAACTTTTCCCAACAGACAGCACA
AGACCAGAAACGAGAGGGAAATAGAGATAATCTCGTTTTGGTGTGTGCCA
GACGTACGGTGTGGCTGAACGCCGATTGGGCAGTTTTTTCGGTTGGCGAA
CAAGAGAATCCAAGTACTAGAGCCTATTACTTGTAGTGATACTCATTACT
ATTAAAGAATAGTCATAGTCATTCGTTACGCTATGATAACAACTTAAATA
CAAAACGCCATTAATATTTACAGCTGAATATTATTTATAGACTAACGAGT
CAAGGGTTAACCCGACTGTGTAGTGTAGTGTAACTGTAGTGTAACTGGCA
ATGTCTATTAATGCGGCATCATTAGGAAAATGAAAATATGGTGCCTTCGG
AGGCACTCGATTCGAGCAGTCTAACTTGAGGATAACATACCGCCAGGCAA
ATTGTTCAGAGTTATCTACTAAATGCATATGGATTACTGGGAAAGTCTGA
CCAATAGGATTCATGGCAGTTTCAGTAGTCGATCTACGATGCGTGTTTGG
TAGATCCTTAGTTGTGTTTGACCAGAGCACCCTCTTGTTCAGTCTGGTAT
GTGGACTCAAGGTGTTCTCTATTGACTGTAGTACCGAGGAGGGGTCTTCA
GCAATGCACTAATAATATATCGGTCTTTATACTCGTCTGACATGTGCTCA
TGTCGAGCCTGCTCACCAAACCCACAGTACAGCACAACCACTCCCGTGTG
AGTCCCGTCCAGCTCAAGAGATTTTCCATTACACTAGTGGAAGAGAGAAT
CGAAGATTTCTGGAGCAAAAGAAGGCATCGTATGGAGACGATCGTGTTTT
GGAAAAAATTGGGAATTTAGGAATCACTTGGAGTTAGTGAAGGAGCAAGG
CTTGGGACGGAAGGAAAGCACCCTGCAAAAAGATGGGGTTTAAGCACCGA
TCGGCCGAAGGAGCCGGAGACACCACGGGCCGAGCGCGCTTTGAGGACAG
CGCCAGTGAGGAAGAAACCACCGGCCGCACGAGAGTAAGGACCTCGTGCC
CAGTGCAAGAACCCAGAGGGGTGAGCCTGGAATCGGGTTACAGTACTGAT
TTGTCTGTGCCCGCACCTGCCGAAGAGCAGCAGAATCACCGGACCGGAGA
AGCTGTACATCGAGTACAACCGGCCGAGGAACCGATCGAGAGCGCCGCAA
GGAGGGCGCCAGTGTAGGAGGCACCGATCGGAGGAGTGCGAGGACTGCGC
AACCAGGGAACCCGAGAGAGCCTGGATTTTACTGGAGATCGCTCGAGACT
CCAGGTCAGGTGAAGGCGAGTCATATCGTTCTTTTATCTGACTTTTGAAA
ATGACTATCGAAGAGCGCGATGTTGCAAGAATGTCGGAAGATCTAGGAAC
AACGATCTGGCGTCTTCGAGAAACGGTTCGAGTCGCGAAGCCGCGACGCA
CCGTCTAGAGCAGATGCGTAGTTTGCTAATGCACGAGAGGCATAAGGTCT
GGAAGCGAGAGTTCGGCTACGACCGTATTGAAATGGCCGCCGAGATGGAT
GAAAAACGCTCTCGCACCAGCACCAGTCCAGTTTCAAACCCTTTCTTATA
TAGAAACATGGTAATTCCTGAACACCCTCATACGCCGGAAGAATTCCATC
TGCAAATGAAAGTGGACGTCGAAGGCTTATGGATAGAAATCATTCTCTCA
CAACCCTCGTCGTCCGAGTGCGATACATCGCCGCGACGCGCCGCGGTCGA
TACGGGATCAGAGGAACCCGGAACGCCGACGCAGTCGCCCGCGATAAGTA
AGGGGTCAGGACCAGAGGCACAGCAAGCAGAAACGCAAATGCACGGAGGA
ATGTTCTCGTTTGAAGCCAGTATGGATGGGTTTTTTAATCAGAACTTTAC
AAGCACGGAGCAGTGAAAAAGAAACTACAACTACTCAACAAGCACCTGTT
CGCAAGGAGTTCGTGAGTCCTACGAAGAAGCAGCAGCAGCAGCGAGGGAC
GACAGCTTGGGGAACTGAGCAGCACAAGCTATTTGATAGGGGGAGGCTGT
TGCGACGCAATTAGTTTCTGAAAAGAGAATTGCTTCCCTGTGTGCTCTGT
CCTCTATATTGTCTTTGCTTTGCTTTGTTTCTTTCCGTTTGCATTTTTTT
GTCTACTGCCCGTATTTCGTATTTTTCCCGCTTTGCCACCGAAGCAGGTA
CGAAGGCGATATGAGCCTTTTGGATGCACCGGATGCGTGAACTGCTGCAT
CAAGGAGCATTGATCACCTCGATT back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig1227:201521..210544- >mRNA_A-nodosum_M_contig1227.29.3 ID=mRNA_A-nodosum_M_contig1227.29.3|Name=mRNA_A-nodosum_M_contig1227.29.3|organism=Ascophyllum nodosum dioecious|type=CDS|length=168bp|location=Sequence derived from alignment at A-nodosum_M_contig1227:201521..210544- (Ascophyllum nodosum dioecious)
ACTAACCCCAAGGACGCAAGCCGGGCAGCCGCGAGCCCGAAGCCTAACGC
TGTGGCCAAGGCGAACCACGGCAGGGGGAGGACAGCTTCTCGAACATGGA
TATCCGGGTCGGCAGGATCACCAAGGTACGAAGGCGATATGAGCCTTTTG
GATGCACCGGATGCGTGA back to top
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