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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 316 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 312 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866650.844391-CDS-A-nodosum_M_contig1222:82120..82385 | 1680866650.844391-CDS-A-nodosum_M_contig1222:82120..82385 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1222 82121..82385 + |
| 1680866650.8536375-CDS-A-nodosum_M_contig1222:89435..89482 | 1680866650.8536375-CDS-A-nodosum_M_contig1222:89435..89482 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1222 89436..89482 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1222.6.1 >prot_A-nodosum_M_contig1222.6.1 ID=prot_A-nodosum_M_contig1222.6.1|Name=mRNA_A-nodosum_M_contig1222.6.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=104bp
CVCPALPSWSLDHMPLALALSKGECVYLHSPIGPQPYPVIYAVVNSVRGL
LYRKIPGEHPQSSSEREHDNKRRDRKKTKSKYQMGYLVGIRGLMSGNGHH
AFHQ back to topmRNA from alignment at A-nodosum_M_contig1222:82121..89484+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig1222.6.1 ID=mRNA_A-nodosum_M_contig1222.6.1|Name=mRNA_A-nodosum_M_contig1222.6.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7364bp|location=Sequence derived from alignment at A-nodosum_M_contig1222:82121..89484+ (Ascophyllum nodosum dioecious)
TGTGTGTGTCCAGCCCTGCCATCGTGGTCATTAGACCATATGCCACTCGC
ATTGGCTCTCTCAAAGGGGGAATGTGTGTATTTACATTCACCGATCGGGC
CTCAACCATACCCAGTAATATACGCGGTTGTCAATTCGGTACGTGGTCTG
CTGTACAGGAAAATACCAGGGGAACATCCACAAAGCTCCAGCGAGAGAGA
GCATGACAACAAAAGGAGAGACAGGAAAAAAACAAAAAGCAAATACCAAA
TGGGATACCTGGTAGGTAAGACGCAGAGACACGCAAGGAGCCCGCAAGTA
TAACGGATTCATGGCGATAGCATACACGCAAGCACGCAACTCGAAGAGGG
GCAATCGCTAGAGAGGGTTTTATGTATCGCCAGCCGCGAGCCATCCGATG
CCCACCCCTGGATCGCAACTAGCTCGCATGTGCACCCAAAGGCATAATAT
CTACCATATATAACACCGTACTCTGGGGGTTCTCAGGCTTGACTGTCGCC
ACAGCCGACGTCGCTTCATGAGTCCTTGGGTCGGTCCAATCGACACGGCT
CTGAAACGTCTCAAGCTTCCTACGGTCACCCCAGATGCAACCTCAACCTT
GTATGCCTCTTCTGCTACTCTCTTCCTCTGCCGCTTTTCGGACCGCTTTT
TCCTTTTCCCTCACCCACGCGACCACAAAACTGCAACCCCCTTCGCAGAC
TGTGCTGCACCAAGCCCCAGGGTCTAGTAGTGCGGCAGTATTCCAGTCCC
CCGTGATGCCGAACACCGGACGATCCTCTACCACGCAGTCCGTCCGTTCT
TCCTCCTACCCCCTTGGCCCACGTTGTCCCTTGTTCTCCAGCTCCCCCGA
CAGGATCCTCTTGGGTAACCTGTGGTTGCCCGTGCGGAGCAGCGCCCCCG
ACCACAACAACCTTCTCACGCACACGGTTGATTCCCTGGAGGGCGTCTTT
GTAGGAGAGGATGCGGTTGTTCGACGATTTGCACCTGGCTCCTAGGATTC
GAAGCAACATCCCGTGAAGCACAGTACGGAGCTTACCGTATTGGCCCTGA
GGAGGCGAGATTGTTGGGTTTGGAGGGGGAGGTTACAAGGAGAGTTGGTC
GTGGTGCTCCCTTTTTGTCGGATTCCCGTCTCTTATTTGTTGCGCCAAGC
GGCGAGAAACTAGCTTTACCCATGTGTTGGAGGGGGACAAGCCTGTCCAC
CATTTCCCGAGTTTTCGTCCCCATATTTTTCTCCGGGCAGTGCGTTGTAG
TTGATGTCGAGGGAGTGGGGTTCCGACCGAGAGCCGTCGTAGTGAGGAGG
GGAGTTGTAGCTGTATGCACGCGCATTTCTAGCCAATAATATGTTTACGA
TAAGTAACCCCCAGGTGGGTTACATGCAGTTGCATAGAATGAGTAGATTA
TAGGGCCGGACTGCGCGGTTATGTGCAATTTAATAAATACATACACACAT
ATACACACACACGCGTAACAAGTATCGTTGATCCCCCCTTGGGACGAACA
ATGCGAGTGGTATAGAACGACTACATGGCAGGGCCAGATTGCGCGGTTAT
GTGTAATTTATTAAAAATGTACAAACACACACACACACTTTTCGCGTCTG
ATCAGAGGTTTTTGTAATAAGTATTATTGATCCCCCCTTGGGACGAACAA
TGCGAGTGGCATAGAATGACTAGATGACAGGGCCGGATTGCGCGGTTATG
TGCAATTTCATAAATACACACACACATGAAGCACACCATGTAGGAAAACA
CCTCGCCGACGCAGTCGAGCGGAAGAAAAACAAGTATCGGGGCTCGTTCC
CCGCTACCTACTCCCTCCTTCCTCTCGCTATGTCGCCATGTGGTGAGGTT
GGCTCAGACGTGCATGCCCTCATCAAGGAGCTCGCCATCAGACGGCTAGA
GCACAGGTCGGAGACACACTCCAACGAGTCCCAACATCTGGCGGAAGGGA
CGGAAGTAGCATGTCTTTGGCGGCGATTCTCTTTTGTTTTACAGCAGGCA
CTTTCATTCCGCACGCGTCACCATCTCTGCAGACAGGGTGTGGCACTTGC
GAGCACCCTACAGCTCCGTTCGCAAGGATCTGGTGTCTGTACAAGCGCAT
CGTACCGGGGGGGTAACCGGGTCCGAGGGACAGGAAGGAGCGAACGGGGT
CGAGGGCGGGATTGGAGTCGGGGGCGGGAACGGAGACGGTAACGGGGTAG
GGGGTGGGAACGGGGACGTGAACGGTCATGGGGACGGAACGGGAACGGGG
GTGGAGGTGAACGAAGGAGCGCAGGATGGGGACGGGAGCGGGGACGAGGC
GGGGACGGGGACTGGGGTGGAGACCCGTAGACGAACACCGGATGGGAACG
GGGACGCGAACGGGGACGGAAGCGAGGACAGTAGCGGAACTGGGAAGACG
ATGATAACGGGGACGGGAACGAGGATAGGATCGGGGAGGGCGGAAGAGAG
GCGAAGAAGCGCAAGAAACCGCAAAATAGTTGTAGACGCCAAGTGGGAAA
CGGGGGAGACTTGGGTGGAAATAGAAAAAAATGTAGAAACTAAAGGGTTG
GTTCAGTAGCTGCCAACCCAGATAATCTAGAGAGCAACAAGGAAGCAGGG
GGGGGGGCACAAGGTGCTCAGGGCTCAAGTAAGAATTGTACAAGTAGAAA
GAGTGAGTCCCCTCTGTCGCATATGATAGAGGTTTTCGTAATAAGTATCA
TTGATCCCCCCTTGGGAGGATCAATGCGAGTGACATAGAATGACTAGGAT
GACAGGGCCGGATTGCGCGGTTATGTGCAATTTAATAAACACACACACAC
ACACGCGTAATAAGAGTATCATTGATCCCCCCTTGGGAAGATCAATGCGA
GGGGCATAGAATGACTAGATGACAGGGCCAAATCGCGCGGTTATGTGCAA
TTTCATAAATACACACACACACAGACACATACTCACACACACTCTAGGGA
CGGAGCGGGAACGGGAACGGGGGTGGAGGCGAACGAAGGAACGCAATATG
GGAACGAGGACAGGGTCGGGGAGAGTGGAAGAGAGGCGAAGAAAAAACAG
GGGGGACCTCTCTCGGGTGGCTACTAAAAGAGGAATAAAAGTAGAAAAGA
AAGGGTTGGTTCAGTAGCTGTCGACCCAGATAATCTAGAAAACTGCAAGG
AAGCAGGGGGGGAGAGCACAAGGTACCCAGATCTTAAGTAAGAACAAGTA
GAGAGAGTGTGTTCCCTTTGTCGCGTCTGATCAGAGGTTTTCGTAATAAG
TATCATTGATCCCCCCTTGGGAGGATCAATGCGAGTGGCATAGAAGGACT
AGGATGACAGGACCGGATTGCGCGGTTATGTGCAATTTAATAAATACACG
CACGCACACAAACAAATACACACACTGAGGTTGACTCGGACGTGCATGCC
CTCATCAAGGAGCTCGCCATCAGACGGGTAGAGCACAGGTCGGAGACACA
CTCCAATGAGTCCCAACATCTAGCGGAAGAGACGGAAGTAGCACGTCTTC
GGCGGCGATTCTCTTTCTGTTTTACACCATCTCTGCAGACAGGGGGTGGC
GCTTGTGAGCACCCGACAGCTCCGTTCGCAAGGCCCGGTGTCTGTACAAG
TGCATCATACCGAGGGGGTAACCGGGTCCGAGGGACAGGAAGGAGCGAAC
GGGGTCGGGGACGGGATTGGAGTCGAGGGCGGGAACGGAGACGGTAACGG
GGTCGGGGGTGGGAACGGTGACGTGAACGGTCATGGGGACGGAGCGGGAA
CGAGAACGGAGGTGGAGGTGAACGGAGGAGCGCAGGATGGGAACGGGGAC
GGGGACGGGGCGGGAACGGGGGTGGAGACCCGCAGACGAACACTGGATGG
GGACGGGGACGGGAACGGGGACAGAAGCGAGGACGGTAGTAGAGAGGGAA
CAGGGACGGAAGCGAGGACGGTAGCGGAGATGGGAACGGGGACGAAGATA
ACGGGAACGAGGATAGGATCGGGTAGGGCGGAAGAGAGGCGAAGAAGCGC
AAGAAACCGCAAAATAGTTGTAGACGCAATGTGGGAAATGGGGGAGACTT
GGGTGGAAAGAGGAAAATATGTAGAAAAGAAAGGGTTGGTTCAGTAGCTG
CCAACCCAGATAATCTAGAGAGCAACAAGGAAGCGGGGGGGGGAGCACAA
GGTACCAAGGGCTCAAGTAAGAATTGTACAAGTAGAGAGAGTGTGTCCCC
TTTGTCGCGTTACACACGTGCAGGCCCTCATCAAGGAGCTTGCCATCAGA
CGAGGTCCGAGATAACTCCAACGAGTCCCAGCATCTGGTGGAGGGGACGG
AAGTAGCACGTCATCGGCGGCGATTTGTTTTCTTTTACAGCAGGCACTTT
CATTCCGCACGCGTCATCATCTCTGCAGACAGGGGGTGGCGCTTGCAGGT
ACCCGACAGTCGCAAGGCCTGGTGTCTTTACACGCGCATTGTACCCAGGG
GGTAACCGGCTCCGAGGGACGAGAAGAAGCGAACGGAGGCGGGATCTGGG
TCGGGAACGGTGATGGGGACGGAGCGGGAACGGGGGTGGACGCGAGCGAT
TGACCCCAAGATGGGAACGGGAACGGGGGTAGAGGAGAGCTCTGGTATCC
TCTACATCGGGAAAGAAGCAGAGTAGAAGACCAGGCATTGTCATTCCGCA
TGCGGCACCACCTCTGTAAATAGGAGGTGGCGCCTGCAGGTAGCCGCCAA
CAGCATCGGGCGCAAGACTCGGCGTCCACGCGACGATGTGGTACCGAGGG
GAGAACAGGGCACCAGGGACGGGAAGCACGGTGATGGGAACAGGGACGGG
GGTGGGGACGGGAGGAGTACGAGTACGGGGAGGAGAACGAAGGTAGGGAT
GATGGGGGCGAGAGCGGGAGCGGGAACAGGAGAGAAAACGGGGACGAGAA
TAGAGATGAGGATGGAGGGGAGGGAGAGCGTGGGAACTTACGAAGTGGTA
ATAGAGGTGGGTCGGAAGACGCGAGAAGGCAGGCGACGCCAACGAGTAAC
CAGCAGCCGCAGCCGCAAGACCCGACGCCCCAGCGGGACCGTCGCATCAT
GCTGAGGACCAGAGGTGAGGGACAGGATCGGGGAGGGTGGAGGAGAGGCG
GAGGAGCGCAAGAAACCCCACAAGAGTTGTAGACGCGATGTGGGAAACGG
GCAAGAATTGGGCCGAAATAGGAAACAGCGTGGACAAGAAAGGGTTGGTT
CAGTAGCTGCCGACCCAGCTTGTGTAATATATAGAGAATAGAATAGCAAA
GAAATAGGGAGGGAAGCGCGAGGCACTCCGGGCTAATGGAGGAACTGTTG
AAAGAGTATATCTCCTTTGTCGCGTTTAATCAGAGGTTTTCGTAATAAGT
ATCATCGATCCCCCCTTGGGAGGAAGAATGCGAATGGCATAGAATGACCA
CTGTAGGATGGCAGACCCGCACTGCGCGCTTATGTGAAATTCCATAAATA
CGCATACACACACTGACACACAGGATAAGTTGCGCTCTACAGCTCACCTG
CGGGCAAACATGCGCGGATGAGCTGCGTCCGACAGTTCACCCCGGGAAAA
CACGCGCGGATGAGCTGCGCCCGACAGCTCACCTGTGGGCAACATGCGCG
GATGAGCTACGCCCGACAACTTACCTGTGGGCAAACATGCGCGGATGAGC
TACGCCCGACAGTTCACCCCGGGAAAACACGCGCGGATGAGCTACATCCG
ACAGCTCACCCCGGGCAAACATGCGCGGATGACCAACGCCCGTTGCTCAC
CCAGGGAAGATATGCGCGGATGAGCTAGGGTAAACATGCGTAGCTCATAG
TATAGTATATTAGGTTTTAGTGCTCGGCCTTGCTCTTAGGCGTGAAAAAA
AATAATGAAACAAGAAGGTTTAGATGCCTTCAATTTTTTCTTTAAACACC
AATCCCCGCTCGCTCGATCGAATGGTTGAAAACTCCACAACCAACTCTTT
GGTTGAAAGCACCACAGGAGATACTTATTAATAGTATTAGAACCAAGGCA
AATATCGCCAACAGAGGAAAAAGACACAACAAGGAAGACACGATCAAGGA
TGGAATAAAAAACAAAACATGGGCCAAATCTACTATTTACGACAGTTCTG
CCCCGCCCCAACTCAGCCCGACGTATCGACTGCGTACTCGCCAAGTCGTT
AGCCTGCCCCGCGTCCACCGAAGAAAGCCCCTCAATCTCTGGCCTCGGGT
TTGGAAAGCCGCTTGGGTACCGCCTGCAGCGCTTGCTCAGGTGATAAAGC
GGGTACCTCTTCTGGGATGTACTCCCGGTTCCTGTTGAGGAACAACACAA
TCCCCGCATACGCCGCGTCGAGTCTGATACGGGACCCGGTGATGAGACGC
CCAGCGGTGCTGAAGTTCCGCTCGAGGACGGCAAAAGACGCCGGCACGGA
CAGAAGAACTCGAGCAGCGCACACCATGTTCGGGTAGAGCGACCGCCCCT
CCATAGCCAAACATTCGATCAGGTCCCCCACCGGGTAGTTGTCCACGCAC
GCACCTTCGAAGTGCTGTTGGAAGCGCTCAAACTCCTGTTGGCAAACCTC
CCGTGTGGTCAGCACGGCCGGCCCCTTGTTCTTGTCCGTTTTGCTGCTCG
AGCTCCCACCGCACACGCCTCTGGCGAGCAATCTCTTCGTCGCTTCGTTC
GATTTCTTGTTGGGAAAGGTCACGGCGGCGAACGGCCCGAGCTTCCGCTT
CTCGTGCGGTGCGGTAGAATTGCCGCCGTCGCTACCGTCGCCCTCAGGTC
CCCTCACGGGCTCGACACCCACTCCATCAACCATGCTCACCATAAGGTCG
ACCACTCTCATATGTATCCACGAGCACCGGAGCAGTAATAGCTCCGGACC
TTATATATCAACGAGCATCGGAACAATAATAAATCCGGATCTCATACACC
AACGAGCATCGGAACATAAAACATTTCATCAAACGTGTGCGGATGAGCTA
CGCCCAACAGCTTACCTGTGGGCAAACACGCGCTGATGAGCTGCGCTCGA
CAGCTTACATGTGGGCAAACATGCGCGGACGAGCTGCGCCCGACAGCTCA
CCTGTGGGTGAACACGCGTAGCACAAGTAGCTCCTACAGCTCACTAAGAA
GCTACCCTCAAAAAGAGCTAGCCTTATCTGATCTATGTTTGCACAATTGT
CCCCTCGTTGGGGGGGGAAGAAAGTGCGAGTAGCATAAAATCACGAACAC
TCTTAAGTGTCATAACAGCTCTGTACTAGGACGATGCGCCTAGTAGCTCT
CTAGAACGGTCTGTGTCGCCCGTAAAGTTCTCTTTCATCACGTACCCTAA
CCGTTGCCGCAGCAGGCATCCGAGGATTAATGTCAGGCAACGGTCACCAT
GCCTTTCATCAGCC back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig1222:82121..89484+ >mRNA_A-nodosum_M_contig1222.6.1 ID=mRNA_A-nodosum_M_contig1222.6.1|Name=mRNA_A-nodosum_M_contig1222.6.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=312bp|location=Sequence derived from alignment at A-nodosum_M_contig1222:82121..89484+ (Ascophyllum nodosum dioecious)
TGTGTGTGTCCAGCCCTGCCATCGTGGTCATTAGACCATATGCCACTCGC
ATTGGCTCTCTCAAAGGGGGAATGTGTGTATTTACATTCACCGATCGGGC
CTCAACCATACCCAGTAATATACGCGGTTGTCAATTCGGTACGTGGTCTG
CTGTACAGGAAAATACCAGGGGAACATCCACAAAGCTCCAGCGAGAGAGA
GCATGACAACAAAAGGAGAGACAGGAAAAAAACAAAAAGCAAATACCAAA
TGGGATACCTGGTAGGCATCCGAGGATTAATGTCAGGCAACGGTCACCAT
GCCTTTCATCAG back to top
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