mRNA_A-nodosum_M_contig1220.6.1 (mRNA) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1220.6.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN) HSP 1 Score: 396 bits (1018), Expect = 3.920e-121 Identity = 198/396 (50.00%), Postives = 273/396 (68.94%), Query Frame = 1
Query: 1 MENLFEEATVKAVIKKANPQSAAGPSGLRYSHLQAALCDELVEDLAAFATLVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWALASIIAG 1188
+E F TV A I++ NPQ + GPSGLR+S LQ++L EL E +A +++F LP FW LHTSANLSA+G K RP+A GD+ RR++G V CR+YG LA++F+P GQYGVAV GG E++A A L ++G +L+YD NAFNS+ R LPALA+++P ++PYA+N+YAREPPKLL+ D G V+ SA GVQQGCNLGPLCYSAG LK+L++FRANPPV GA+ ++FIDD+ V+LP + + AA VT W+Q + G++LNR KS+ L G + E+ R ++ T L V GMR+VGVPVG + + + GEP +L++ +A ++DAQAS QILR SA +RL+ LLR++PP +T +AA+ +D VE L +I+ G
Sbjct: 1154 VEEPFATETVTATIRRGNPQGSPGPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLLYKTDSG-MAVIPSATGVQQGCNLGPLCYSAGLLKLLRDFRANPPVVGAQLMAFIDDLVVLLPKNHACNPAAAEAVTTWIQANMQPLGVALNRSKSKILFPPGTDVKSWPEKDRETLERTQLAVAEGGMRIVGVPVGEPDYIKRSALDIARGEPTDLLKEIASLDDAQASLQILRFSAATRLNFLLRSLPPDLTKEAASEFDKSVEQTLETILNG 1548
BLAST of mRNA_A-nodosum_M_contig1220.6.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE) HSP 1 Score: 370 bits (951), Expect = 4.200e-120 Identity = 198/394 (50.25%), Postives = 259/394 (65.74%), Query Frame = 1
Query: 13 FEEATVKAVIKKANPQSAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWALASIIAG 1188
FE +K +KKANPQSA GP GLR+S+LQA + D E LA F+ VF LP FW LHTSANLSALG+K RP+A G VLRR+I FC +Y +A+ F+ Q+G V GGVEI+A TA L ++G TILS+DG NA+NS+ R LPA+A P +V Y N+YAR KLLF ++ G EVV S RGVQQGCNLG + G L I+KEF PPVPGA+ + ++DD+ V LPP + ++ AI VT W+Q+ L +GI L+ KS+ L +G+ LT +++ + TGL+V GM +VGVPVGTE FQR F+ G PAEL+R L+ ++D QAS+Q+LRLS RL HLLRT+ PSIT AA +D L+ WA++ I+ G
Sbjct: 120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCHQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLG 513
BLAST of mRNA_A-nodosum_M_contig1220.6.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE) HSP 1 Score: 374 bits (960), Expect = 7.570e-119 Identity = 197/394 (50.00%), Postives = 261/394 (66.24%), Query Frame = 1
Query: 13 FEEATVKAVIKKANPQSAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWALASIIAG 1188
FE +K +KKANPQSA GP GLR+S+LQA + D E LA F+ VF LP FW LHTSANLSALG+K RP+A G VLRR+I FCR+Y +A+ F+ Q+G V GGVEI+A TA L ++G TILS+DG NA+NS+ R LPA+A P +V Y N+YAR KLLF ++ G EVV S RGVQQGCNLG + G L I+KEF PPVPG + + ++DD+ LPP + ++ AI VT W+QERL +GI L+ KS+ L +G+ LT +++ + GL+V GM VVG+PVGTE+FQR+F+ + G+PAEL+ LA ++D QAS+Q+LRLS RL HLLRT+ PSIT AA +D ++ WA++ I+ G
Sbjct: 120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVTEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLG 513
BLAST of mRNA_A-nodosum_M_contig1220.6.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE) HSP 1 Score: 375 bits (963), Expect = 3.920e-117 Identity = 197/394 (50.00%), Postives = 261/394 (66.24%), Query Frame = 1
Query: 13 FEEATVKAVIKKANPQSAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWALASIIAG 1188
FE +K +KKANPQSA GP GLR+S+LQA + D E LA F+ VF LP FW LHTSANLSALG+K RP+A G VLRR+I FCR+Y +A+ F+ Q+G V GGVEI+A TA L ++G TILS+DG NA+NS+ R LPA+A P +V Y N+YAR KLLF ++ G EVV S RGVQQGCNLG + G L I+KEF PPVPG + + ++DD+ LPP + ++ AI VT W+QERL +GI L+ KS+ L +G+ LT +++ + GL+V GM VVG+PVGTE+FQR+F+ + G+PAEL+ LA ++D QAS+Q+LRLS RL HLLRT+ PSIT AA +D ++ WA++ I+ G
Sbjct: 120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDSFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLG 513
BLAST of mRNA_A-nodosum_M_contig1220.6.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE) HSP 1 Score: 331 bits (848), Expect = 3.470e-106 Identity = 175/361 (48.48%), Postives = 233/361 (64.54%), Query Frame = 1
Query: 109 LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWALASIIAG 1188
+ D E LA F+ VF LP FW LHTSANLSALG+K RP+A G VLRR+I FCR+Y +A+ F+ Q+G V GGVEI+A TA L ++G TILS+DG NA+NS+ R LPA+A P + Y N+YAR KLLF ++ G EVV S RGVQQGCNLG + G L I+KEF PPVPGA+ + ++DD+ V LPP + ++ AI VT W+Q+ L +GI L+ KS L +G+ LT +++ + TGL+V GM +VGVPVGTE FQR F+ G PAEL+ L+ ++D Q S+Q+LR+S RL HLLRT+ PSIT AA +D+L+ WA++ I+ G
Sbjct: 1 MSDYFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSNVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGIPAELIPRLSTLDDPQTSYQLLRMSGVPRLFHLLRTIAPSITNTAAREHDSLMIWAVSKIVLG 361
BLAST of mRNA_A-nodosum_M_contig1220.6.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE) HSP 1 Score: 335 bits (860), Expect = 1.580e-101 Identity = 175/361 (48.48%), Postives = 236/361 (65.37%), Query Frame = 1
Query: 109 LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWALASIIAG 1188
+ D E LA F+ VF LP W LHTSANLSALG+K RP+A G VLRR+I F R+Y +A+ F+ Q+G V GGVEI+A TA L ++G TILS+DG NA+NS+ R LPA+A + P +V Y N+YAR KLLF ++ G EVV S RGVQQGCNLG + G L I+KEF PPVPG + + ++DD+ LPP + ++ AI VT W+QERL +GI L+ KS+ L +G+ LT +++ + GL+V GM VVG+PVGTE+FQR+F+ + G+PAEL+ LA ++D QAS+Q+LRLS RL HLLRT+ PSIT AA +D ++ WA++ I+ G
Sbjct: 1 MSDSFTETLADFSFKVFYYGDELPDFLWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFYRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLG 361
BLAST of mRNA_A-nodosum_M_contig1220.6.1 vs. uniprot
Match: A0A6H5KQ62_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ62_9PHAE) HSP 1 Score: 267 bits (682), Expect = 1.320e-82 Identity = 143/278 (51.44%), Postives = 182/278 (65.47%), Query Frame = 1
Query: 13 FEEATVKAVIKKANPQSAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEGISLNRRKSQAL 840
FE +K +KKANPQSA GP GLR+S+LQA + D E LA F+ VF LP FW LHTSANLSALG+K RP+A G VLRR+I FCR+Y +A+ F+ Q+G V GGVEI+A TA L ++G TILS+DG NA+NS+ R LPA+A P +V Y N+YAR KLLF ++ G EVV S RGVQQGCNLG + G L I+KEF PPVPG + + ++DD+ LPP + ++ AI VT W+QERL +GI L+ KS+ L
Sbjct: 120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVL 397
BLAST of mRNA_A-nodosum_M_contig1220.6.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE) HSP 1 Score: 197 bits (501), Expect = 4.800e-57 Identity = 101/212 (47.64%), Postives = 139/212 (65.57%), Query Frame = 1
Query: 553 LDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWALASIIAG 1188
++ G E+V S RGVQQGCNLG +S G L +KEF PPVPGA+ + ++DD+ V LPP + ++ AI VT W+Q+ L +GI L+ KS+ L +G LT +++ + TGL+V GM +VGVPVGTE FQR F+ G PAEL+R L+ ++D QAS+Q+LRLS RL HLLRT+ PSIT AA +D L+ WA++ I+ G
Sbjct: 1 MEDGSIEIVRSQRGVQQGCNLGGFGFSVGLLDTMKEFNDKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGFFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLG 212
BLAST of mRNA_A-nodosum_M_contig1220.6.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE) HSP 1 Score: 195 bits (495), Expect = 3.370e-51 Identity = 133/396 (33.59%), Postives = 207/396 (52.27%), Query Frame = 1
Query: 4 ENLFEEATVKAVIKKANPQSAAGPSGLRYSHLQAALCDELV-EDLAA-----FATLVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF-LKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWAL 1170
E F+ + VI + S AG G R+SHL++ ++ ED + LV P FWTL ++L ALG+K RPV G RR+I A R++ KL + F+ Q+GVAV+GGVE +A+ A L + G I+ D +NAFN+ R + A+ +P +V Y + Y P ++ +D G +E GVQQG +GP +S + I+ + + G +++DDIT+ L + L ++ +T+ + E L GI +NR KS AL G +T++QR ++ GLTV +G+ VVGVP+GT+ + R+F +K G +L R L M D Q + I LS R +++ R + P++T +A D +V+WAL
Sbjct: 535 EEEFDPQVLIEVINSRSSNSGAGNDGQRFSHLKSITNTKIGREDFCGAMSSLWRRLVNDPNTFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHL---KDLTEESVQAMTDLVDE-LAEVGIVVNRAKSSALPPPG---HMITDQQRRLLEGVGLTVAGEGITVVGVPIGTDNYVREFAMKVITEGGAEKLARMLPLMSDRQVANLITSLSLIQRSAYIERGIDPTLTKEACERLDNMVQWAL 923
BLAST of mRNA_A-nodosum_M_contig1220.6.1 vs. uniprot
Match: A0A6H5JLD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD7_9PHAE) HSP 1 Score: 166 bits (421), Expect = 6.100e-45 Identity = 81/179 (45.25%), Postives = 119/179 (66.48%), Query Frame = 1
Query: 652 LKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWALASIIAG 1188
+KEF PPVPG + + ++DD+ LPP + ++ AI VT W+QERL +GI L+ KS+ L +G+ LT +++ + GL+V GM VVG+P GTE+FQR+F+ + G+PAEL+ LA ++D QAS+Q+LRLS RL HLLRT+ PSIT AA +D ++ WA++ I+ G
Sbjct: 1 MKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPAGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLG 179 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1220.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1220.6.1 >prot_A-nodosum_M_contig1220.6.1 ID=prot_A-nodosum_M_contig1220.6.1|Name=mRNA_A-nodosum_M_contig1220.6.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=396bp MENLFEEATVKAVIKKANPQSAAGPSGLRYSHLQAALCDELVEDLAAFATback to top mRNA from alignment at A-nodosum_M_contig1220:124932..126119+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1220.6.1 ID=mRNA_A-nodosum_M_contig1220.6.1|Name=mRNA_A-nodosum_M_contig1220.6.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1188bp|location=Sequence derived from alignment at A-nodosum_M_contig1220:124932..126119+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1220:124932..126119+ >mRNA_A-nodosum_M_contig1220.6.1 ID=mRNA_A-nodosum_M_contig1220.6.1|Name=mRNA_A-nodosum_M_contig1220.6.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1188bp|location=Sequence derived from alignment at A-nodosum_M_contig1220:124932..126119+ (Ascophyllum nodosum dioecious)back to top |