mRNA_A-nodosum_M_contig122.18.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig122.18.1 vs. uniprot
Match: D8LPT2_ECTSI (Mannose-P-dolichol utilization defect 1 protein homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPT2_ECTSI) HSP 1 Score: 193 bits (490), Expect = 4.000e-55 Identity = 96/139 (69.06%), Postives = 117/139 (84.17%), Query Frame = 3
Query: 408 PTSAYGEIMTIFLQNAILVLLMWRFMKDPPSGLGIVMIIAGFVATAVACAMLPRDYMVLLPLSNLPLIIVAKVPQIVANLKNGHTGQLAAITTLLNFVGASVRILTTIQEVGWDLGLLSMHGLSSLLNGALALQMALYW 824
P SAYGEIMTI +QN ++VLL+W +MK+ PS LGIV ++A F+ T V CA L ++++LLP SNLPLI+VAKVPQI+ N NGHTGQLA++TT+LNFVGA++RILTTIQEVGWDLGLL MHGLSS LNG LALQ+ LYW
Sbjct: 87 PFSAYGEIMTILVQNIVIVLLLWYYMKNRPSALGIVGLMAVFLGTTVGCATLKMEHLMLLPYSNLPLIVVAKVPQIMINHDNGHTGQLASVTTMLNFVGATIRILTTIQEVGWDLGLLWMHGLSSFLNGVLALQVVLYW 225
BLAST of mRNA_A-nodosum_M_contig122.18.1 vs. uniprot
Match: A0A835YUU5_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUU5_9STRA) HSP 1 Score: 152 bits (383), Expect = 2.190e-39 Identity = 78/155 (50.32%), Postives = 110/155 (70.97%), Query Frame = 3
Query: 408 PTSAYGEIMTIFLQNAILVLLMWRFM--KDPPSGLGIVMIIAGFVATAVACAMLPRDYMVLLPLSNLPLIIVAKVPQIVANLKNGHTGQLAAITTLLNFVGASVRILTTIQEVGWDLGLLSMHGLSSLLNGALALQMALYWERTAQWSAAQAQKK 866
P SAYGE++TI +QN +LV+L+W +M ++ P+ G +I GF AV CA LP +Y+ LLPL+NLPLI+VA++PQI+ +NGHTGQLA IT +N G ++R+LTTIQEVGWD GLL +G S + NG L +Q+ YW T ++ ++ +KK
Sbjct: 95 PLSAYGEVLTILVQNLVLVVLLWAYMTPQERPALAGRAFVIMGFATIAVGCAALPPEYLHLLPLTNLPLILVARIPQILTIYQNGHTGQLAFITMAMNVAGTALRMLTTIQEVGWDKGLLIQYGTSLVFNGILFVQILYYWGATNKFVDSEDKKK 249
BLAST of mRNA_A-nodosum_M_contig122.18.1 vs. uniprot
Match: A0A7S2V5B2_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5B2_9STRA) HSP 1 Score: 129 bits (325), Expect = 4.370e-31 Identity = 71/155 (45.81%), Postives = 101/155 (65.16%), Query Frame = 3
Query: 408 PTSAYGEIMTIFLQNAILVLLMWRFMKDPPSGLGIVMIIAGFVATAVACAMLPRDYMVLLPLSNLPLIIVAKVPQIVANLKNGHTGQLAAITTLLNFVGASVRILTTIQEVGWDLGLLSMHGLSSLLNGALALQMALYWERTAQWSAAQAQKKTE 872
P SA+GE+++IF+QN +LV L+WR+ K ++++A F A A AC P L+PL+N+P+I++A+VPQI+ N KNGHTGQLA IT +N G+ R+LTTI EVG D GL+ + + S LN + LQM YW+ T + Q KKT+
Sbjct: 95 PWSAFGEVISIFVQNLVLVGLLWRYAKPTIGLTSRLLVLAVFAAIAAACWYCPPSLQPLIPLANVPVIVMARVPQILLNFKNGHTGQLAFITVCMNAFGSLSRVLTTIIEVGGDWGLVLSYSVGSSLNTFIFLQMLYYWKNTENFQK-QMDKKTQ 248
BLAST of mRNA_A-nodosum_M_contig122.18.1 vs. uniprot
Match: A0A5D6XZP8_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZP8_9STRA) HSP 1 Score: 114 bits (284), Expect = 4.520e-25 Identity = 65/155 (41.94%), Postives = 94/155 (60.65%), Query Frame = 3
Query: 408 PTSAYGEIMTIFLQNAILVLLMWRFMKDPPSGLGIVMIIAGFVATAVACAMLPRDYMVLLPLSNLPLIIVAKVPQIVANLKNGHTGQLAAITTLLNFVGASVRILTTIQEVGWDLGLLSMHGLSSLLNGALALQMALYWERTAQWSAAQAQKKTE 872
P S +GE + I QN +LVLL+W ++ + + ++ FVA + P +Y LL + +P+ IVA++PQIV+N K GHTGQLA +T +LNF G+ RI TT+QE G + LL G+ LLNG L LQ+ L+W T + A A+KK +
Sbjct: 119 PVSTWGENLIILAQNIVLVLLLWTYVTPKIAYSTRLALVVAFVAVTAGALLTPPEYQWLLASAGIPVSIVARIPQIVSNFKQGHTGQLAFVTLVLNFGGSVARIFTTLQETGDPVQLLGF-GVGILLNGTLVLQVLLFWGATNKALAVAAKKKAK 272
BLAST of mRNA_A-nodosum_M_contig122.18.1 vs. uniprot
Match: A0A485KEC0_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KEC0_9STRA) HSP 1 Score: 113 bits (282), Expect = 5.390e-25 Identity = 65/144 (45.14%), Postives = 91/144 (63.19%), Query Frame = 3
Query: 408 PTSAYGEIMTIFLQNAILVLLMWRFMKDPPSG--LGIVMIIAGFVATAVACAMLPRDYMVLLPLSNLPLIIVAKVPQIVANLKNGHTGQLAAITTLLNFVGASVRILTTIQEVGWDLGLLSMHGLSSLLNGALALQMALYWERT 833
P S +GE +TI +QN ILV ++W + K P S LG+ A FVA LP ++ +LP S++PL ++A++PQI +N K GHTGQLA IT LNF G++ R+ TT+QE G + LL +S LLNG L Q+ +YW+ T
Sbjct: 97 PISTWGESLTILIQNIILVAMLWVYSKAPASTQLLGV----ATFVALGAGMLHLPSEFDWVLPASSIPLSVMARIPQIFSNFKQGHTGQLAFITLFLNFGGSAARLFTTLQETGDQVVLLGFL-ISMLLNGTLIAQILIYWKAT 235
BLAST of mRNA_A-nodosum_M_contig122.18.1 vs. uniprot
Match: A0A024TCH2_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A024TCH2_9STRA) HSP 1 Score: 109 bits (273), Expect = 8.990e-24 Identity = 64/144 (44.44%), Postives = 90/144 (62.50%), Query Frame = 3
Query: 408 PTSAYGEIMTIFLQNAILVLLMWRFMKDPPSG--LGIVMIIAGFVATAVACAMLPRDYMVLLPLSNLPLIIVAKVPQIVANLKNGHTGQLAAITTLLNFVGASVRILTTIQEVGWDLGLLSMHGLSSLLNGALALQMALYWERT 833
P S++GE I +QNAILVLL+W + S LG+V FVA LP ++ LLP +++PL ++A++PQI++N + GHTGQLA +T LNF G++ R+ TT+QE G D +L +S LLNG L Q+ LYW T
Sbjct: 97 PISSWGESAVILIQNAILVLLLWHYSGAAKSTQFLGVVT----FVALGAGMFYLPSEFNWLLPSASIPLSVMARIPQIMSNFQQGHTGQLAFLTLFLNFGGSAARLFTTLQETG-DQVVLFGFAISMLLNGTLLAQIGLYWSAT 235
BLAST of mRNA_A-nodosum_M_contig122.18.1 vs. uniprot
Match: A0A662X041_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X041_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.080e-23 Identity = 69/158 (43.67%), Postives = 97/158 (61.39%), Query Frame = 3
Query: 408 PTSAYGEIMTIFLQNAILVLLMWRFM--KDPP-SGLGIVMIIAGFVATAVACAMLPRDYMVLLPLSNLPLIIVAKVPQIVANLKNGHTGQLAAITTLLNFVGASVRILTTIQEVGWDLGLLSMHGLSSLLNGALALQMALYWERTAQWSAAQAQKKTE 872
P S +GE + I QN +LVLL+W F K P S LG+V+ GF A +P +Y LL + +P+ IVA++PQI++N K GHTGQLA IT +LN G+ R+ TT+QE G D ++ G++ LLNG L LQ+ L+W T + A ++KK E
Sbjct: 118 PVSTWGENLVILAQNVVLVLLLWAFYVPKIPATSRLGLVL---GFAALGAGMFAIPPEYQWLLASAGIPVSIVARIPQILSNFKQGHTGQLAIITLVLNLGGSIARLFTTMQETG-DPVQIAGFGVAILLNGTLVLQVLLFWGATNKALAQASKKKAE 271
BLAST of mRNA_A-nodosum_M_contig122.18.1 vs. uniprot
Match: A0A6G0XK20_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XK20_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.240e-23 Identity = 64/155 (41.29%), Postives = 94/155 (60.65%), Query Frame = 3
Query: 408 PTSAYGEIMTIFLQNAILVLLMWRFMKDPPSG--LGIVMIIAGFVATAVACAMLPRDYMVLLPLSNLPLIIVAKVPQIVANLKNGHTGQLAAITTLLNFVGASVRILTTIQEVGWDLGLLSMHGLSSLLNGALALQMALYWERTAQWSAAQAQKK 866
P S +GE I +QN ILV+L+W + P + LG+V FV LP ++ +LP +++PL + A++PQI++N + GHTGQLA +T LNF G++ R+ TT+QE G + LL +S LLNG L Q+ +YW+ T A +AQKK
Sbjct: 97 PISTWGESAVILVQNVILVVLLWYYSSAPKTTQLLGVVT----FVGLGAGMYHLPSEFDWVLPSASIPLSVAARIPQIISNFRQGHTGQLAFLTLFLNFGGSAARLFTTLQETGDQVVLLGF-AISMLLNGTLLTQILIYWKATDAVLAKEAQKK 246
BLAST of mRNA_A-nodosum_M_contig122.18.1 vs. uniprot
Match: A0A225VUR1_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VUR1_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.910e-23 Identity = 70/158 (44.30%), Postives = 99/158 (62.66%), Query Frame = 3
Query: 408 PTSAYGEIMTIFLQNAILVLLMWRFM--KDPPSG-LGIVMIIAGFVATAVACAMLPRDYMVLLPLSNLPLIIVAKVPQIVANLKNGHTGQLAAITTLLNFVGASVRILTTIQEVGWDLGLLSMHGLSSLLNGALALQMALYWERTAQWSAAQAQKKTE 872
P S + E + I QN ILVLL+W F K P S G+V++ F A AV +P +Y LL + +P+ IVA++PQI++N K GHTGQLA +T +LNF G+ R TT+QE G D ++ G+++LLNG L LQ+ L+W T + + AQA KK +
Sbjct: 115 PLSTWAENLVILAQNIILVLLLWAFYTPKIPVSSRFGLVVV---FAALAVGMFSIPDEYQWLLASAGIPVSIVARIPQILSNFKQGHTGQLALVTLVLNFAGSIARAFTTMQETG-DPVQVAGFGVATLLNGTLVLQVLLFWGATNK-ALAQASKKKD 267
BLAST of mRNA_A-nodosum_M_contig122.18.1 vs. uniprot
Match: D0NCC3_PHYIT (Mannose-P-dolichol utilization defect 1 protein homolog n=11 Tax=Phytophthora TaxID=4783 RepID=D0NCC3_PHYIT) HSP 1 Score: 108 bits (270), Expect = 3.850e-23 Identity = 69/160 (43.12%), Postives = 95/160 (59.38%), Query Frame = 3
Query: 408 PTSAYGEIMTIFLQNAILVLLMWRFMK-----DPPSGLGIVMIIAGFVATAVACAMLPRDYMVLLPLSNLPLIIVAKVPQIVANLKNGHTGQLAAITTLLNFVGASVRILTTIQEVGWDLGLLSMHGLSSLLNGALALQMALYWERTAQWSAAQAQKKTE 872
P S +GE + I QN ILVLL+W F P GL + F A A +P +Y LL + +P+ IVA++PQI++N K GHTGQLA IT +LNF G+ R+ TT+QE G D ++ G++ LLNG L LQ+ L+W T + + AQA KK +
Sbjct: 118 PLSTWGENVVILAQNIILVLLLWSFYTPKIAVSPRFGL-----VLAFAAIAAGMFSIPDEYQWLLASAGIPVSIVARIPQILSNFKQGHTGQLALITLVLNFAGSIARLFTTMQETG-DPVQVAGFGVAILLNGTLVLQVLLFWGATNK-ALAQATKKKD 270 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig122.18.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig122.18.1 >prot_A-nodosum_M_contig122.18.1 ID=prot_A-nodosum_M_contig122.18.1|Name=mRNA_A-nodosum_M_contig122.18.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=148bp MTIFLQNAILVLLMWRFMKDPPSGLGIVMIIAGFVATAVACAMLPRDYMVback to top mRNA from alignment at A-nodosum_M_contig122:170730..173002- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig122.18.1 ID=mRNA_A-nodosum_M_contig122.18.1|Name=mRNA_A-nodosum_M_contig122.18.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2273bp|location=Sequence derived from alignment at A-nodosum_M_contig122:170730..173002- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig122:170730..173002- >mRNA_A-nodosum_M_contig122.18.1 ID=mRNA_A-nodosum_M_contig122.18.1|Name=mRNA_A-nodosum_M_contig122.18.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=444bp|location=Sequence derived from alignment at A-nodosum_M_contig122:170730..173002- (Ascophyllum nodosum dioecious)back to top |