mRNA_A-nodosum_M_contig122.16.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig122.16.2 vs. uniprot
Match: A0A6H5KNE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNE0_9PHAE) HSP 1 Score: 164 bits (416), Expect = 2.060e-47 Identity = 79/100 (79.00%), Postives = 89/100 (89.00%), Query Frame = 1
Query: 7 SLQLGKTFSLWPEPADGSVLNTTGAYSLCRHPMYTGLVMFSLGLGFSTGSFTRIALACLLGYVLVSGDREADLEEEKLMDIHPAYKTYKEEVSKFLPSVY 306
+LQLG+ FS WPEPA+G VLNTTG YSLCRHPMY GLV FSLGLGFST SFTRIALACLLGYVL DR+AD+EEEKL+ +HPAYKTYKEEVSKF+P++Y
Sbjct: 119 ALQLGRNFSPWPEPAEGGVLNTTGVYSLCRHPMYAGLVAFSLGLGFSTDSFTRIALACLLGYVL---DRKADMEEEKLVAVHPAYKTYKEEVSKFVPTLY 215
BLAST of mRNA_A-nodosum_M_contig122.16.2 vs. uniprot
Match: D8LPT1_ECTSI (S-isoprenylcysteine O-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT1_ECTSI) HSP 1 Score: 164 bits (416), Expect = 3.020e-47 Identity = 79/100 (79.00%), Postives = 89/100 (89.00%), Query Frame = 1
Query: 7 SLQLGKTFSLWPEPADGSVLNTTGAYSLCRHPMYTGLVMFSLGLGFSTGSFTRIALACLLGYVLVSGDREADLEEEKLMDIHPAYKTYKEEVSKFLPSVY 306
+LQLG+ FS WPEPA+G VLNTTG YSLCRHPMY GLV FSLGLGFST SFTRIALACLLGYVL DR+AD+EEEKL+ +HPAYKTYKEEVSKF+P++Y
Sbjct: 132 ALQLGRNFSPWPEPAEGGVLNTTGVYSLCRHPMYAGLVAFSLGLGFSTDSFTRIALACLLGYVL---DRKADMEEEKLVAVHPAYKTYKEEVSKFVPTLY 228
BLAST of mRNA_A-nodosum_M_contig122.16.2 vs. uniprot
Match: A0A836C7I2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7I2_9STRA) HSP 1 Score: 121 bits (303), Expect = 5.060e-30 Identity = 60/96 (62.50%), Postives = 71/96 (73.96%), Query Frame = 1
Query: 10 LQLGKTFSLWPEPADGSVLNTTGAYSLCRHPMYTGLVMFSLGLGFSTGSFTRIALACLLGYVLVSGDREADLEEEKLMDIHPAYKTYKEEVSKFLP 297
L LGK S WP+P + +VL TTG YS+CRHPMY GL+ FS GLGF+T SFTRIALA LL Y L D++A EE+ L +HPAYKTY+EEV KF P
Sbjct: 155 LGLGKNLSPWPQPCENNVLITTGVYSICRHPMYAGLLAFSFGLGFATDSFTRIALAALLLYTL---DKKATEEEKALEAVHPAYKTYQEEVPKFFP 247
BLAST of mRNA_A-nodosum_M_contig122.16.2 vs. uniprot
Match: A0A7S0MLQ9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MLQ9_9CRYP) HSP 1 Score: 82.4 bits (202), Expect = 1.680e-16 Identity = 43/101 (42.57%), Postives = 62/101 (61.39%), Query Frame = 1
Query: 1 EGSLQLGKTFSLWPEPADGSVLNTTGAYSLCRHPMYTGLVMFSLGLGFSTGSFTRIALACLLGYVLVSGDREADLEEEKLMDIHPAYKTYKEEVSKFLPSV 303
+GS LG+ + WP+P + + L T GAY+LCRHP+Y GL++ GL +T S R+ A L +VL+ DR+A EE L + H Y +YK V +F PS+
Sbjct: 14 QGSRSLGENLTPWPKPTEENQLTTDGAYALCRHPIYGGLLLACFGLSITTASPARLLFAAAL-FVLM--DRKAAREEVWLSEKHDGYSSYKSAVPRFFPSL 111
BLAST of mRNA_A-nodosum_M_contig122.16.2 vs. uniprot
Match: A0A2V3IUX4_9FLOR (Cobalt-zinc-cadmium resistance protein CzcN n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUX4_9FLOR) HSP 1 Score: 77.8 bits (190), Expect = 1.430e-13 Identity = 39/95 (41.05%), Postives = 57/95 (60.00%), Query Frame = 1
Query: 22 KTFSLWPEPADGSVLNTTGAYSLCRHPMYTGLVMFSLGLGFSTGSFTRIALACLLGYVLVSGDREADLEEEKLMDIHPAYKTYKEEVS-KFLPSV 303
K S+WP P L T+GAY RHPMY+G+V+ S+G +TGS R+AL+ L ++ D+EE+ L D +P Y+ Y EEV K +P++
Sbjct: 172 KQLSIWPAPVPNGELQTSGAYEYVRHPMYSGVVLASVGFAVATGSPARLALSIAFAAFL---SKKIDVEEQFLKDAYPGYEEYSEEVPYKMIPTI 263
BLAST of mRNA_A-nodosum_M_contig122.16.2 vs. uniprot
Match: UPI001C405819 (isoprenylcysteine carboxylmethyltransferase family protein n=1 Tax=Anthocerotibacter panamensis TaxID=2857077 RepID=UPI001C405819) HSP 1 Score: 74.3 bits (181), Expect = 3.470e-13 Identity = 42/97 (43.30%), Postives = 53/97 (54.64%), Query Frame = 1
Query: 16 LGKTFSLWPEPADGSVLNTTGAYSLCRHPMYTGLVMFSLGLGFSTGSFTRIALACLLGYVLVSGDREADLEEEKLMDIHPAYKTYKEEVSKFLPSVY 306
LG + +P P L TTG YSL RHP+YTG+V+ SLGL T S R+ L L V D +A EE+ L + P Y Y++ V KF P VY
Sbjct: 57 LGPNLTPFPRPRPEGQLVTTGIYSLIRHPLYTGVVLASLGLSLFTNSLLRLLLTVALFLV---HDLKASREEQWLEERFPEYPNYRQRVKKFFPGVY 150
BLAST of mRNA_A-nodosum_M_contig122.16.2 vs. uniprot
Match: A0A7S2XU15_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XU15_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 4.310e-13 Identity = 44/103 (42.72%), Postives = 62/103 (60.19%), Query Frame = 1
Query: 4 GSLQLGKTFSLWPEPADGSV---LNTTGAYSLCRHPMYTGLVMFSLGLGFSTGSFTRIALACLLGYVLVSGDREADLEEEKLMDIHPAYKTYKEEV-SKFLPS 300
G ++G + S WP P L +G +S RHP+Y+GL++FS GL ST S R+ L +L YVL D ++D EE+KLM++ P Y Y++EV KF PS
Sbjct: 163 GVNEMGGSLSPWPVPPSNESNKQLIKSGLFSKVRHPIYSGLLLFSAGLSISTDSANRLLLTAILLYVL---DVKSDYEEKKLMEVFPDYAEYQKEVPGKFFPS 262
BLAST of mRNA_A-nodosum_M_contig122.16.2 vs. uniprot
Match: UPI001C40172A (isoprenylcysteine carboxylmethyltransferase family protein n=1 Tax=Anthocerotibacter panamensis TaxID=2857077 RepID=UPI001C40172A) HSP 1 Score: 73.6 bits (179), Expect = 6.760e-13 Identity = 39/97 (40.21%), Postives = 55/97 (56.70%), Query Frame = 1
Query: 16 LGKTFSLWPEPADGSVLNTTGAYSLCRHPMYTGLVMFSLGLGFSTGSFTRIALACLLGYVLVSGDREADLEEEKLMDIHPAYKTYKEEVSKFLPSVY 306
L F+++P P L T G Y L RHP YTGL++F LG+ F T S ++ L L LV D +A +EE L P Y +Y+++V KF+P +Y
Sbjct: 57 LRSNFTVFPRPRPEGELVTDGIYGLMRHPFYTGLILFCLGISFLTDSLIKLLLTVGL---LVFLDAKARVEERWLEGRFPQYTSYRQQVKKFIPGIY 150
BLAST of mRNA_A-nodosum_M_contig122.16.2 vs. uniprot
Match: UPI00042365D6 (isoprenylcysteine carboxylmethyltransferase family protein n=1 Tax=Flavobacterium gelidilacus TaxID=206041 RepID=UPI00042365D6) HSP 1 Score: 72.4 bits (176), Expect = 2.010e-12 Identity = 37/98 (37.76%), Postives = 59/98 (60.20%), Query Frame = 1
Query: 10 LQLGKTFSLWPEPADGSVLNTTGAYSLCRHPMYTGLVMFSLGLGFSTGSFTRIALACLLGYVLVSGDREADLEEEKLMDIHPAYKTYKEEVSKFLPSV 303
LQL K +++P P S L T G Y RHP+Y+GL++F+LG F S+ +IA+A +L L+ + + EE+KL+ Y YK++V++F P +
Sbjct: 55 LQLNKNLTVFPTPKTDSELITFGMYKFSRHPIYSGLILFTLGYAFFKASYFKIAIALIL---LLLFYFKTNYEEQKLLQKFSNYNDYKKKVNRFFPKI 149
BLAST of mRNA_A-nodosum_M_contig122.16.2 vs. uniprot
Match: A0A7S0E531_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E531_9CRYP) HSP 1 Score: 74.3 bits (181), Expect = 2.130e-12 Identity = 38/96 (39.58%), Postives = 63/96 (65.62%), Query Frame = 1
Query: 16 LGKTFSLWPEPADGSVLNTTGAYSLCRHPMYTGLVMFSLGLGFSTGSFTRIALACLLGYVLVSGDREADLEEEKLMDIH-PAYKTYKEEVSKFLPS 300
LG++ S +P+ + +VL T G YS+CRHPMY GL++ +GL +T SF+R+ +L +L +++AD+EE L+ H +YK Y ++V K +P+
Sbjct: 141 LGESLSPFPKATEDNVLQTDGVYSICRHPMYGGLILACIGLAMTTVSFSRMLFTIILLLIL---NQKADVEEGFLVQKHGESYKEYAKKVPKLVPN 233 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig122.16.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig122.16.2 >prot_A-nodosum_M_contig122.16.2 ID=prot_A-nodosum_M_contig122.16.2|Name=mRNA_A-nodosum_M_contig122.16.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=69bp MYTGLVMFSLGLGFSTGSFTRIALACLLGYVLVSGDREADLEEEKLMDIHback to top mRNA from alignment at A-nodosum_M_contig122:187618..188571+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig122.16.2 ID=mRNA_A-nodosum_M_contig122.16.2|Name=mRNA_A-nodosum_M_contig122.16.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=954bp|location=Sequence derived from alignment at A-nodosum_M_contig122:187618..188571+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig122:187618..188571+ >mRNA_A-nodosum_M_contig122.16.2 ID=mRNA_A-nodosum_M_contig122.16.2|Name=mRNA_A-nodosum_M_contig122.16.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=207bp|location=Sequence derived from alignment at A-nodosum_M_contig122:187618..188571+ (Ascophyllum nodosum dioecious)back to top |