mRNA_A-nodosum_M_contig1218.28.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1218.28.1
Unique NamemRNA_A-nodosum_M_contig1218.28.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
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BLAST of mRNA_A-nodosum_M_contig1218.28.1 vs. uniprot
Match: UPI000719B1EB (uncharacterized protein LOC106806841 n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719B1EB)

HSP 1 Score: 133 bits (334), Expect = 2.380e-29
Identity = 94/303 (31.02%), Postives = 154/303 (50.83%), Query Frame = 3 
Query:  741 TGFPSFKALQLHAKYVSGHG-AVHSHKQYNPADFHEGNESAGGASRRRRKTTMDEANSILFTLVILRTGMHLNVAAALFGLSNSTAGRVFMTWLCLLWSAHFPLVRMPTWSEVADGCPTSVRERGMGEVAVMIDCTEFTAERMSMKDAAHYLFSPYKQRPTVKFVVGITTSGAFCYVSDGYGGSMTDNAVVRKSGLLDVLKEQRYPEGAEVLADSGFNGLEMDLMKIGMFLSMPPSSRGRLDEARFSEEDDGFSTDEAKNVLLHVGRAIGGLKEWKYVVQPVTWDSLDLIDTAVQLCAALTNM 1646
            TG PS+   +     VS H  ++H +K    AD  +        ++   K +    + +L TL+ LR  +  +  A  FGL  S+  +V  TW+ LL       +  P+        P    +   G V  +IDCTE   +R S+  +   ++S YK RPT+K +VGIT SG   Y+S   GG+ +D  +V+ + ++D     ++  G   +AD GFN  E+ L K  + L +PP  R     ++F+E +D  +T    N  +HV RAIG LKE++ +  P+  + +DL+++A+ +CAAL N+
Sbjct:  215 TGLPSYNLFKWLLAEVSPHAQSLHYYKGKLSAD--DKTWQINNTTKPGLKRSQSLEDQLLMTLMKLRLNLQEDDLAFRFGLRQSSVSQVLSTWIPLLAKELAAFIHWPSKEGTMKYYPACFHKY-KGTVRCIIDCTEIQIDRPSLAASNSQVYSQYKSRPTLKCLVGITPSGTISYISKPTGGNTSDKKIVKMTNIVD-----KFEPGDICMADRGFNIQELFLHK-QVRLVIPPFQRTTNSTSQFTESED-INTKTVANARIHVERAIGRLKEFQILQGPIPLNMIDLMESALVVCAALVNL 507
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BLAST of mRNA_A-nodosum_M_contig1218.28.1 vs. uniprot
Match: UPI0018D96EF2 (uncharacterized protein LOC119746092 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D96EF2)

HSP 1 Score: 128 bits (322), Expect = 8.460e-28
Identity = 115/427 (26.93%), Postives = 188/427 (44.03%), Query Frame = 3 
Query:  381 YRVCAHHFNYEDFEVSSAKEREDGSPSVRLRRGAIPSVDETAYRSALKTSVEDCFRWRALAENLLIKDGGDRKPKESASPSPKDVXXXXXXXXXXXPTSVLSVGALNSMEQRHPGCVLTLTGFPSFKALQLHAKYVSGHGA-VHSHKQYNPADFH----EGNESAGGASRRRRKTTMDEANSILFTLVILRTGMHLNVAAALFGLSNSTAGRVFMTWLCLLWSAHFPLVRMPTWSEVADGCPTSVRERGMGEVAVMIDCTEFTAERMSMKDAAHYLFSPYKQRPTVKFVVGITTSGAFCYVSDGYGGSMTDNAVVRKSGLLDVLKEQRYPEGAEVLADSGFNGLEMDLMKIGMFLSMPPSSRGRLDEARFSEEDDGFSTDEAKNVLLHVGRAIGGLKEWKYVVQPVTWDSLDLIDTAVQLCAALTNM 1646
            YR      N +D +   A E +    ++  R   +  V        L    ++C     L +NLL       K K  A    K               S+  +   N +       +   TG PS++  +   + +  H   +H +K    A+      + N+  G   R+R +   DE   +  TL+ LR  +  +  A  FG+S ST  +V  TWL  L       +  PT  ++    P    +   G V  +IDCTE   ER S+  +   ++S YK RPT+K +VGIT  G   ++S   GG+ +D  +V+ + ++D L+         ++AD GFN  E+ L K  + L +PP  R     ++F+E +D   T    N  +HV RAIG LKE+  +  P+    +DL+++A+ +CAA+ N+
Sbjct:  117 YRSIGIQVNPDDIDDVKALENDHNYANLPFRNRPVSPVYVAHLEEELAKLTDNCGE---LKQNLLESKSNIDKLKLEAQAKTKQRF------------SIRDICHSNEL-------IKLYTGLPSYQLFEWLFEEIKPHTKNMHYYKGKTSAEDKAYQLKNNDKPG---RKRSQALEDE---LFMTLMKLRLNLREDDLAFRFGVSQSTVSQVISTWLPFLDRELKAFIDWPTEEDIYKYYPQCFHKY-KGTVRCIIDCTEIQIERPSLAASNSQVYSQYKSRPTLKCLVGITPGGTISFISKPTGGNTSDKKIVKMTNIIDHLEPNDI-----LMADRGFNIQELLLHK-QVKLVIPPFMRTTTSTSQFTESED-TKTKTVANARIHVERAIGRLKEFSILQGPIPLTMIDLMESALVVCAAIVNL 507
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BLAST of mRNA_A-nodosum_M_contig1218.28.1 vs. uniprot
Match: UPI00201ED970 (uncharacterized protein LOC124123796 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201ED970)

HSP 1 Score: 122 bits (306), Expect = 1.780e-27
Identity = 87/268 (32.46%), Postives = 136/268 (50.75%), Query Frame = 3 
Query:  879 RRKTTMDEANSILFTLVILRTGMHLNVAAALFGLSNSTAGRVFMTWLCLLWSAHFPLVRMPTWSEVAD-GCPTSVRERGMGEVAVMIDCTEFTAERMSMKDAAHYLFSPYKQRPTVKFVVGITTSGAFCYVSDGYGGSMTDNAVVRKSGLLDVLKEQRYPEGAEVLADSGFNGLEMDLMKIGMFLSMPPSSRGRLDEARFSEEDDGFSTDEAKNVLLHVGRAIGGLKEWKYVVQPVTWDSLDLIDTA--------VQLCAALTNMLRP 1655
            R+K  + + + +L TL+ LR  + +   A  FG+S S+A R+F  WL +L   +  L R+  W +  +   P   R +    V  +IDCTE   ER S   A    +S YKQ  TVKF++GI+ SGA  ++S  +GG  +D  +   SG++D     ++  G +VLAD GF  ++ +L   G  L +P  S+G+   +R   E     +    NV +HV R I  LK+W  +  P+    +   +T+        VQ+CAAL N+  P
Sbjct:   13 RKKNKLSDEDELLLTLMKLRKNLCMQDLAYRFGISKSSATRIFHAWLDVL---YIHLGRLVMWPDTIEMHLPKCFRNKIFRRVRCIIDCTEIFIERASNNKARSQTYSRYKQHNTVKFLIGISPSGAIIFLSPVWGGRASDKIITLTSGIID-----KFVPG-DVLADRGFF-IDTELATQGAQLMVPAYSKGKNQLSRQEVETSRVYS----NVRIHVERVINRLKDWGVMKGPLPITLVKKANTSAETTVGKMVQVCAALVNLCPP 266
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BLAST of mRNA_A-nodosum_M_contig1218.28.1 vs. uniprot
Match: UPI00201F33ED (uncharacterized protein LOC124126185 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F33ED)

HSP 1 Score: 123 bits (309), Expect = 3.780e-26
Identity = 86/268 (32.09%), Postives = 135/268 (50.37%), Query Frame = 3 
Query:  879 RRKTTMDEANSILFTLVILRTGMHLNVAAALFGLSNSTAGRVFMTWLCLLWSAHFPLVRMPTWSEVAD-GCPTSVRERGMGEVAVMIDCTEFTAERMSMKDAAHYLFSPYKQRPTVKFVVGITTSGAFCYVSDGYGGSMTDNAVVRKSGLLDVLKEQRYPEGAEVLADSGFNGLEMDLMKIGMFLSMPPSSRGRLDEARFSEEDDGFSTDEAKNVLLHVGRAIGGLKEWKYVVQPVTWDSLDLIDTA--------VQLCAALTNMLRP 1655
            R+K  + + + +L TL+ LR  + +   A  FG+S S+A R+F  WL +L   +  L R+  W +  +   P   R +    V  +IDCTE   ER S   A    +S YKQ  TVKF++GI+ SGA  ++S  +GG  +D  +   SG++D     ++  G  VLAD GF  ++ +L   G  L +P  ++G+   +R   E     +    NV +HV R I  LK+W  +  P+    +   +T+        VQ+CAAL N+  P
Sbjct:  255 RKKNKLSDEDELLLTLMKLRKNLCMQDLAYRFGISKSSATRIFHAWLDVL---YIHLGRLVLWPDTIEMHLPKCFRNKIFRRVRCIIDCTEIFIERASNNKARSQTYSRYKQHNTVKFLIGISPSGAIIFLSPVWGGRASDKIITLTSGIID-----KFVPGDVVLADRGFF-IDTELATRGAQLMVPAYTKGKNQLSRQEVETSRVYS----NVRIHVERVINRLKDWGVMKGPLPITLVKKANTSTETTVGKMVQVCAALVNLCPP 509
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BLAST of mRNA_A-nodosum_M_contig1218.28.1 vs. uniprot
Match: UPI001EE5E33E (uncharacterized protein LOC124254355 n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5E33E)

HSP 1 Score: 122 bits (307), Expect = 6.940e-26
Identity = 84/267 (31.46%), Postives = 139/267 (52.06%), Query Frame = 3 
Query:  879 RRKTTMDEANSILFTLVILRTGMHLNVAAALFGLSNSTAGRVFMTWLCLLWSAHFPLVRMPTWSEVADGCPTSVRERGMGEVAVMIDCTEFTAERMSMKDAAHYLFSPYKQRPTVKFVVGITTSGAFCYVSDGYGGSMTDNAVVRKSGLLDVLKEQRYPEGAEVLADSGFNGLEMDLMKIGMFLSMPPSSRGRLDEARFSEEDDGFSTDEAKNVLLHVGRAIGGLKEWKYVVQPVTWDSLDLIDTA--------VQLCAALTNMLRP 1655
            R+K+ +   + +L TL+ LR+ + +   A  FG++ S+A ++F  WL +L+     LV+ P   ++    PT+ R +    V  +IDCTE   ER S   A    +S YKQ  TVKF++GI+ SGA  ++S  +GG  +D  +  +SG+++     ++  G  VLAD GF  ++ +L   G  L++P  ++G+   +R   E     +    NV +HV R I  LK+W  +  P+    +    T+        VQ+CAAL N+  P
Sbjct:  257 RKKSKLTSEDELLLTLMKLRSNLCMQDLAFRFGIAKSSATKIFHAWLDVLYIQLGGLVKWPESMDMQ--LPTAFRNKTFRRVKCIIDCTEIFIERPSNNKARLQTYSRYKQHNTVKFLLGISPSGAIIFLSPVWGGRASDKVITLQSGIIE-----KFVPGDVVLADRGFF-IDTELATRGAKLTVPAYTKGKNQLSRQEVETSRVYS----NVRIHVERVINRLKDWAVIKGPLPITLVKRGKTSEKCTVGKMVQVCAALVNLCPP 511
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BLAST of mRNA_A-nodosum_M_contig1218.28.1 vs. uniprot
Match: A0A1E1XPL8_9ACAR (Putative isl2eu-1 adi (Fragment) n=2 Tax=Amblyomma sculptum TaxID=1581419 RepID=A0A1E1XPL8_9ACAR)

HSP 1 Score: 117 bits (293), Expect = 2.110e-25
Identity = 83/268 (30.97%), Postives = 124/268 (46.27%), Query Frame = 3 
Query:  852 ESAGGASRRRRKTTMDEANSILFTLVILRTGMHLNVAAALFGLSNSTAGRVFMTWLCLLWSAHFPLVRMPTWSEVADGCPTSVRERGMGEVAVMIDCTEFTAERMSMKDAAHYLFSPYKQRPTVKFVVGITTSGAFCYVSDGYGGSMTDNAVVRKSGLLDVLKEQRYPEGAEVLADSGFNGLEMDLMKIGMFLSMPPSSRGRLDEARFSEEDDGFSTDEAKNVLLHVGRAIGGLKEWKYVVQPVTWDSLDLIDTAVQLCAALTNMLRP 1655
            +S+ G SR      +   +     LV L TGM +   A  FG++ S   + F  W+  +  A   + R+P+ +EV    P         +  ++ID TE   +  S  DA    FSPYK   TVK +VG T  G  C+VSD +GGS++D  +V KS LLD+ K      G  ++ D GF     DL+  G+   MPP +R  L +    +      T    +  +H+ R I  +KE+  +         D+I+  +Q CA LTN   P
Sbjct:   48 QSSKGPSR-----ALGSIDDFFMVLVRLLTGMPVKELARNFGMTQSYVSKTFSKWVLFMHKALRAITRVPSLAEVQQNLPKQFLN--FRDTRMVIDGTEIRLQTPSSVDAQRQTFSPYKHGNTVKVLVGATPDGYVCFVSDAWGGSISDRDLVLKSKLLDIFKP-----GDAIMMDKGFK--IFDLLPPGVTAHMPPFNRPSLGQMNTGDVS---KTRSIASARVHIERVIRRIKEFHILDGGYPITMTDIINPVLQTCAYLTNFQYP 298
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BLAST of mRNA_A-nodosum_M_contig1218.28.1 vs. uniprot
Match: UPI001EE565F8 (uncharacterized protein LOC124260515 isoform X3 n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE565F8)

HSP 1 Score: 117 bits (292), Expect = 5.530e-25
Identity = 83/251 (33.07%), Postives = 134/251 (53.39%), Query Frame = 3 
Query:  909 SILFTLVILRTGMHLNVAAALFGLSNSTAGRVFMTWLCLLWSAHFPLVRMPTWSEVADGCPTSVRERGMGEVAVMIDCTEFTAERMSMKDAAHYLFSPYKQRPTVKFVVGITTSGAFCYVSDGYGGSMTDNAVVRKSGLLDVLKEQRYPEGAEVLADSGFNGLEMDLMKI-GMFLSMPPSSRGR-LDEARFSEEDDGFSTDEAKNVLLHVGRAIGGLKEWKYVVQPVTWDSLDLIDTAVQLCAALTNMLRP 1655
            + L TLV LR G+ ++  + LFG+S+ST  R F T++  +      +V+ P   +V    P + R     +   +IDCTEF  ++ S+  +    +S YK   T K +V I+ +GAF Y+S  +  S++D  +V++SG LD L       G +++AD GF  L  DL+ + G  L++PP + G+ L +A   +      T    +  +HV RAIG LK +K++       S  LI+ +VQ+CA L N  +P
Sbjct:  100 AFLLTLVRLRRGLDVDHLSDLFGISSSTVSRYFRTYIEFISRELSFVVKWPIRLQVQAHLPKAFRY--FKKTIAIIDCTEFFVQKPSLPSSQRVTWSQYKHHNTFKCLVAISPTGAFTYISPLWSSSVSDRRIVKESGFLDNLNY-----GDDIMADRGF--LIRDLLALRGCTLNIPPFAHGKQLSKAAVKK------TRRIAHARIHVERAIGRLKNFKFLQGIFPLKSKKLINQSVQVCAQLCNFDKP 335
[Close]
BLAST of mRNA_A-nodosum_M_contig1218.28.1 vs. uniprot
Match: UPI00148AC44B (uncharacterized protein LOC105344497 isoform X1 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148AC44B)

HSP 1 Score: 115 bits (287), Expect = 6.110e-25
Identity = 79/262 (30.15%), Postives = 132/262 (50.38%), Query Frame = 3 
Query:  870 SRRRRKTTMDEANSILFTLVILRTGMHLNVAAALFGLSNSTAGRVFMTWLCLLWSAHFPLVRMPTWSEVADGCPTSVRERGMGEVAVMIDCTEFTAERMSMKDAAHYLFSPYKQRPTVKFVVGITTSGAFCYVSDGYGGSMTDNAVVRKSGLLDVLKEQRYPEGAEVLADSGFNGLEMDLMKIGMFLSMPPSSRGRLDEARFSEEDDGFSTDEAKNVLLHVGRAIGGLKEWKYVVQPVTWDSLDLIDTAVQLCAALTNMLRP 1655
            +R RR   +D  +  L T++ L+ G+++   A  FG+S     + F TW+CLL+     L   P+        P+  +      + V++DCTE   +R S     +  FS YK   T+KF+VGIT  G   +VS+G+GG ++D  ++ ++ LLD+++E     G  V+AD GF   +M L K G  L++PP    R    +F+ ++    T E   + +HV RAIG +K +      ++   + L      +C  +TN+  P
Sbjct:   15 TRSRRCMALDPIDQFLATMMRLKVGLYVQDMAERFGVSVGAFSQYFSTWVCLLYKELKELNPFPSRDVSQRNIPSCFKS--FPSLRVILDCTEIFIQRSSSLVNQNQSFSNYKHHTTLKFLVGITPFGVISFVSEGFGGRVSDRQMIERTCLLDLIEE-----GDGVMADKGFTIKDM-LEKKGSTLNIPPF---RSSSNQFTTQEV-LDTQEIAKLRIHVERAIGRVKNFHIFDGVLSLSLVPLSSQMFSVCCWITNLDVP 264
[Close]
BLAST of mRNA_A-nodosum_M_contig1218.28.1 vs. uniprot
Match: UPI00148A939B (uncharacterized protein LOC117686392 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A939B)

HSP 1 Score: 119 bits (299), Expect = 9.920e-25
Identity = 85/292 (29.11%), Postives = 145/292 (49.66%), Query Frame = 3 
Query:  780 KYVSGHGAVHSHKQYNPADFHEGNESAGGASRRRRKTTMDEANSILFTLVILRTGMHLNVAAALFGLSNSTAGRVFMTWLCLLWSAHFPLVRMPTWSEVADGCPTSVRERGMGEVAVMIDCTEFTAERMSMKDAAHYLFSPYKQRPTVKFVVGITTSGAFCYVSDGYGGSMTDNAVVRKSGLLDVLKEQRYPEGAEVLADSGFNGLEMDLMKIGMFLSMPPSSRGRLDEARFSEEDDGFSTDEAKNVLLHVGRAIGGLKEWKYVVQPVTWDSLDLIDTAVQLCAALTNMLRP 1655
            KY SG G+  + K+Y         +S    S  +RK  +      + TLV LR  +   V A LFG+S S   +VF TW+  +++   PL++ P+ + +    P+S R +    V  +IDCTEF  ++     A    FS YK   T K +VG++ SGAF ++S+ +GG+++D  + ++SG LD ++      G E++AD GF   ++ L +    +  P + +    + ++    +   T       +HV RAIG LK +  +   +  +   L D  + +CA L N+ +P
Sbjct:  274 KYWSGQGSA-AKKKYQK-------DSLNAKSGPKRK--LSRFQEFVLTLVRLRLALTTFVMADLFGVSTSRVSQVFTTWINFMFTIFKPLLKWPSRNVLKKFMPSSFRAK-FPNVNCIIDCTEFFIKKPRNPTAQSQTFSSYKHHNTYKALVGVSPSGAFSFISNLWGGNVSDRYITKESGFLDNIQP-----GDEIMADRGFLIRDLLLHRRAKLIIPPFTRKCSWGKGKYLSASEILRTRNIAKFRIHVERAIGRLKTFHMLSNTMPTNLKPLADQMLVICAFLCNLQKP 549
[Close]
BLAST of mRNA_A-nodosum_M_contig1218.28.1 vs. uniprot
Match: A0A147BIZ4_IXORI (Putative isl2eu-1 adi (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A147BIZ4_IXORI)

HSP 1 Score: 115 bits (288), Expect = 1.800e-24
Identity = 81/250 (32.40%), Postives = 120/250 (48.00%), Query Frame = 3 
Query:  906 NSILFTLVILRTGMHLNVAAALFGLSNSTAGRVFMTWLCLLWSAHFPLVRMPTWSEVADGCPTSVRERGMGEVAVMIDCTEFTAERMSMKDAAHYLFSPYKQRPTVKFVVGITTSGAFCYVSDGYGGSMTDNAVVRKSGLLDVLKEQRYPEGAEVLADSGFNGLEMDLMKIGMFLSMPPSSRGRLDEARFSEEDDGFSTDEAKNVLLHVGRAIGGLKEWKYVVQPVTWDSLDLIDTAVQLCAALTNMLRP 1655
            + +   LV LRT M     A  FG+S ST  R F  WL +L S    + R+P   EV        RE    +  +++D TE   ++ S  +A    FS YK   T+K +VGIT      +VSD +GGS +D A+V + G+LD+L+      G  V+ D GF     DL+ +G+ L +PP    R+   +    +D   T +     +HV RAI  +KE+     P+  +  D+ D     CA L+N   P
Sbjct:   90 DQLFMVLVRLRTAMPCKEIARNFGVSESTLSRTFARWLFMLNSVLRDITRLPQLHEVQRNMLECFRE--FPDTRIVLDSTEVRIQKPSALEAQRKTFSSYKHANTMKCLVGITPDCLIAFVSDLFGGSTSDRAIVDRCGVLDLLES-----GDAVMVDKGFK--VQDLLPVGVKLYIPPF---RIAGEKQMSREDVVCTRKVAAARVHVERAIRRIKEFHVFDTPLPLNMADIADEIFATCALLSNFHGP 327
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1218.28.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000719B1EB2.380e-2931.02uncharacterized protein LOC106806841 n=1 Tax=Priap... [more]
UPI0018D96EF28.460e-2826.93uncharacterized protein LOC119746092 n=1 Tax=Patir... [more]
UPI00201ED9701.780e-2732.46uncharacterized protein LOC124123796 n=1 Tax=Halio... [more]
UPI00201F33ED3.780e-2632.09uncharacterized protein LOC124126185 n=1 Tax=Halio... [more]
UPI001EE5E33E6.940e-2631.46uncharacterized protein LOC124254355 n=1 Tax=Halio... [more]
A0A1E1XPL8_9ACAR2.110e-2530.97Putative isl2eu-1 adi (Fragment) n=2 Tax=Amblyomma... [more]
UPI001EE565F85.530e-2533.07uncharacterized protein LOC124260515 isoform X3 n=... [more]
UPI00148AC44B6.110e-2530.15uncharacterized protein LOC105344497 isoform X1 n=... [more]
UPI00148A939B9.920e-2529.11uncharacterized protein LOC117686392 n=1 Tax=Crass... [more]
A0A147BIZ4_IXORI1.800e-2432.40Putative isl2eu-1 adi (Fragment) n=1 Tax=Ixodes ri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1218contigA-nodosum_M_contig1218:189511..196915 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog7668.SPU_024105-tr
PFAMsDDE_Tnp_4,HTH_Tnp_4,THAP
Model size2001
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons3
Evalue4.86e-27
EggNOG OGs2CQK3@1|root,2S458@2759|Eukaryota,3A7MN@33154|Opisthokonta,3BSRK@33208|Metazoa,3DFYF@33213|Bilateria
DescriptionDDE superfamily endonuclease
Cds size1533
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866642.88225-UTR-A-nodosum_M_contig1218:189510..1896521680866642.88225-UTR-A-nodosum_M_contig1218:189510..189652Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1218 189511..189652 +
1680866642.8936243-UTR-A-nodosum_M_contig1218:194878..1948881680866642.8936243-UTR-A-nodosum_M_contig1218:194878..194888Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1218 194879..194888 +
1680866642.9280505-UTR-A-nodosum_M_contig1218:196599..1969151680866642.9280505-UTR-A-nodosum_M_contig1218:196599..196915Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1218 196600..196915 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866642.9047015-CDS-A-nodosum_M_contig1218:194888..1955061680866642.9047015-CDS-A-nodosum_M_contig1218:194888..195506Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1218 194889..195506 +
1680866642.9195497-CDS-A-nodosum_M_contig1218:195684..1965991680866642.9195497-CDS-A-nodosum_M_contig1218:195684..196599Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1218 195685..196599 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1218.28.1prot_A-nodosum_M_contig1218.28.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1218 194889..196599 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1218.28.1

>prot_A-nodosum_M_contig1218.28.1 ID=prot_A-nodosum_M_contig1218.28.1|Name=mRNA_A-nodosum_M_contig1218.28.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=511bp
MEGGCSAGGDGRGQGGKARAKDEIAAPKVRQTKRCCCGQDWCPKDANAAF
NVPAGPVARVNWAHALNVRGLIFGKEYRVCAHHFNYEDFEVSSAKEREDG
SPSVRLRRGAIPSVDETAYRSALKTSVEDCFRWRALAENLLIKDGGDRKP
KESASPSPKDVESASPSPEDVEPTSVLSVGALNSMEQRHPGCVLTLTGFP
SFKALQLHAKYVSGHGAVHSHKQYNPADFHEGNESAGGASRRRRKTTMDE
ANSILFTLVILRTGMHLNVAAALFGLSNSTAGRVFMTWLCLLWSAHFPLV
RMPTWSEVADGCPTSVRERGMGEVAVMIDCTEFTAERMSMKDAAHYLFSP
YKQRPTVKFVVGITTSGAFCYVSDGYGGSMTDNAVVRKSGLLDVLKEQRY
PEGAEVLADSGFNGLEMDLMKIGMFLSMPPSSRGRLDEARFSEEDDGFST
DEAKNVLLHVGRAIGGLKEWKYVVQPVTWDSLDLIDTAVQLCAALTNMLR
PPFCDTSDSD*
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mRNA from alignment at A-nodosum_M_contig1218:189511..196915+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1218.28.1 ID=mRNA_A-nodosum_M_contig1218.28.1|Name=mRNA_A-nodosum_M_contig1218.28.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7405bp|location=Sequence derived from alignment at A-nodosum_M_contig1218:189511..196915+ (Ascophyllum nodosum dioecious)
CCGAAGCAACCACGCACAAAAATTAGGTATCCGCCACGGTCGAAACTTGC
ATAGCGAGCTTGGTGGGAAGGGGAGGCCGCTCTGGCTCAGTACAAGCGTC
TACCTGACATACCTTGTACTACGTTGGGATTGTACCGTGAAGGTGAGCGA
TTTCGAACGTATAAACACAAAGTAAGCCTGCCTTTCGACAGTCCAAGTCT
TCGCTTGCAGTCTGTACCGACCACAGAAATTTTACTTTTAAAAACATCGT
TTTCCCCCCTTCCTTCGAGAGCACGCTGAAAGCTAGATGACCCCTATACA
GAACGAGGCCTTATTGGGATATCGAGGCGCCTAAGAGGAGCGTAAACAGA
CGTCATACTTGCGGTAGACATAGTTTTCCAGTTCTACAGTTTTTCCGGGG
TAAACCCCTTTCCCGCCTAAGCTTAGCCCTCACTCTCATTTTGCTTCACC
ACGGCCTGCCGCCGAATACGGCTATCTCAGACAGTAACGCCCATTAAGCC
CTCCATTACCCATTAGTATACCAACTTCAATAACTGCATTTACGAGCCCC
ATCTTCCCTCGATCGATCCCGACGTGTAACTCGCGGAGCTCGTGTTTGCA
AGTCCTGTTTTTTTTTTAAAGATTTTGTGGGTAGTGTAATTTGCCCTGTT
GTCGAATATCTTGGTATTTCTGTAGTCCCCGCGAGCAACTTTGTCATTGT
TCGCGCCGAGCACGATGGCAGCGATGTGCCGAGCTCTGGACAACACTTCA
GACAGCTCGTCCTGCCCAAAGCGCGCGAAGACTCTCAACGGCTCGAGGGG
CGAGCATTCTTTAACAAACGCTAAGTTTCGTAAAGAGGAGTGACCAAAAT
CGGGTATACCCGATGGTTAGGGCCGTTTGAAACCACCCAGAGCTTTTTTG
AAAATTTGAAAATTTTGAAAACTTCATAAATCGTGAGGAGGCGTTCTTCC
AAACTACTTCAAAAACTCTGGAAGCTACCGAGGGCCCTGAGATTTGGAGC
CGTTATTTTCAAAGTTTTTTGACGATTTCAAAATTTGTGTAGCACTGGAA
AACAAGGGCGACATAAGGGCGTCGTACGCCGTACCACAAGTCACACTCAA
CAGCAGAGGTAGCCTGGATGTTGGCTGGGACAGGACAGACCACAGAAAAC
GCGGTGCGCCCTCTAGTTCGGCGACTTTTGTGTTTGGTTCCTGTGGTACA
GCAGTACACCTTGAGCGCCATGAAAAGATACGTAACATTTTTTGTGATAC
ATCAGTTTGTTGTTGCTGTTGCTTTTGTTTCTCACATTCAGCGTATTGGT
TGCCAACCCGAAAAAAACTACTTTACACGGTGGCCAATCCCGCTCGTGGT
AAGTACAACTTGATTGAGTGCGATGAAAAGAAACATAACATTTCCTGTAG
CTACTGCAgtGTGTGTACAACTGGAGTACTGTACCCTGAAATTTCCTGTG
GTACAAACGTTCATACCAGGTATGTACTACACTACACTATAGCTCACAGT
GTATTGTGGTATTTCGATGACACTTAATATCATATACTAATATTACTATG
GTACTGTACTGACTTTGTACACTAATATTACTGTTGTACTGTACTGACTT
TGCTCTGGCCGGGACATGCCTTTGGCGACCACTAACCCTTGCGTGCGTGC
TCAATTTGGAAGCCCACGTCACATCCTTTAAAATGAATAAGTCAAGCTTC
AAACTTTTTGGCACCGATTATTTTTAGTTTGGAAGAAAAGTTTGGACCGT
TTAAAACGGCCCTTATGTGGCCATTATCGGATACCCTTCTAATCCAACGA
CCGAAACAGCCCCAGGACGCCTCCTCATTGGCCAACGCCGGCCACTACCC
GACCCTGCCCACATTTCCACCGGGTGTGCCCGATTTTAGCTATTCAACTC
GCGAAGGGTACCCGATTCTCATGCCCCCCACCCGATGATGGCCACAAACA
CACGGACTCTTCGACCAACAGCCCACACACGCGCCATCCCAGGTACATAT
TCTCAGCTATCGACGGCGGCGGCCTTCTTCCAGAGTGACTCTCTTTGGGG
CGCTCACGCTTGCTTGTCTCTCTCCCTCTCTCTCTAACACACACAACCAA
CCTAACAGAAGCCGCACTCAACCACACTCAGCACAGCAGTTGTGACAGAC
CGACCATGAGCGACAGCACCACCAAACTCGCAGAAAAGCAGTGTTACCCA
GACACAAAGGCCTTGCGGACCGCCGTGGGCGAGTTCTTCGCACACGACAG
CCGCTCGTTTTTGGTATGCTTTGTCTTTGCTTTTCTCTTTACTTCGCATT
TTGTTTTTTTTCTCGTTTACGATCTTGTTTATTGCTAGGGTTGTCTCCCC
GTCTGTCATACCAGGTAGTGACCTTCATCCGCGGGTCGGGGGGACGGGGT
GGTCGCCCCGGCGGTTAAAGTCCAACATTCAGGCATGCCAAAGGATGCGG
GGGTGGCCTGTTTTTGTTGGATTGTTTTGGATTGTGTTTGCAAGAACAAG
TATCATAATTATGTCCTGGTTTGAAGAAGAGATTTTCTTTCTTTTCTTGT
CTTGTGCGCTTGTTGTTCTGAATTATGATCTTTCTTTTTGATTTTTTTTA
GATCACTTTATCTCTCTTTTCATTCGTGTTTAGGAAAAATCTGAACGCAT
CTAAACCTTCTGAGCATGTGGTCATCTTCGGTCGATCTTTTCGCTGACTT
GATTTCATAACTCTTGCGTAATAGTTACACAGTGACAACGAAACGCGCCT
CCTATCCGTTGGATCGTGTTATTATAGTACAAAAATAAGGGGGCATAAAC
CGGAACGATGTTGCAAGTGATGAGGACAAACGATAGCATTCGCAAAAGAG
TCATCTTGTTCGACTCTTTCTGTTGTTGTCGACCTCTTGCTCCTAATTTG
TACACAATTCAACTATATATGACAAAATATGAACAAGAGGCATGAAATAT
TCATCAGTTTTCACAGAATACTTAGGGACGAAATCTCCACACTCGCGTAT
GATGCATGAGCATTACTTAGTCGTCGGTATACTTTATCCCGAAATTTGTG
TGGGACTTTTTTACCTCTGTTTGAAACCGATAACATTACACGATGATACT
ACCTTCAATATGCCTAAGAGTCTGCCAGGGAGTCTGGGCGGGAATATTGA
AATAGTTTACTACTACTATAATCCAGGGCCGGAATATCCTTGATGTGAAA
GCTAATACTTGAGTTATAATTCTCTTGTACAAAATAAAAAGCAGGAGCAG
TATTCTCAAGTTTTTTTCCTCCAAAAAGATACTGCTGTAATACTACAGCG
GCAGCAACATGATTCAAAGGTTCTTTCTTGAGCCTTTCTTTATCCTTTCC
TTACCTCTGCCACACTATGCCACCAATATGATATATGCATGTTTGTTGAC
ATGACTCTTTGACACCAGCGGATAACAAGTAGCCCAGACAAAAAAGACAT
CAGATATAGAAGAGATGCGTCAACATAGAGCATTTTACATTTATGTACCC
TGGTATGTTACAAGAGGACTCGATCAATAGCCAGCAAACCACAAGCAATC
AGCGGCAGTACAATAGTATTACTAGTAGTAAGAGATAATCTATAATTGTA
GTGCCTCGCAGCCTCCTTCCTTCCCTAAGCAGAATTAAGTCTTATGCTTT
CCTCCACTGTTCTTGCTCGCGGTGAACGAGCGGCTGTCGTGTGCCAAGAA
CCCGCCCACGGCGGTCCGCAAAGCCTTTGTTTCTGGGTAACACTGCTTTT
CTGCGAGTTTGGTGGTGCTGTCGCTGATGGTCGGTCTGTTACAACTGCTG
TGCTGAGTGTGGCTTCTGTTTGGTTGGTTATGTGTGTGTGAGAGAGAGGG
GGGGAGAGACAAGCAAGCGTGAGCCTTGAAGAGAGTCAATCTGGAAGAAG
TTCGTCGCCGTCGATAGCTGAGAGCATGAACCTGGGACGGCGCGTGTGCG
GGCTGCTGGTCGAAGAGCCCGTGTGTTTGTGGCCATTATCGGGTAGAGAG
AGGGGGAGAGAGACAAGCAAGCGTGAGCCTTGAAGAAAGTCAACCGCCGC
CGTCGATAGCTGAGAGAATGCACCTGGGACGGCGCGTGTGCGAGGTGTTT
TTCGAAGAGCCCGTGTGTTTGTGGCCATTATCGGGTAGGGGGCATGAGAA
TCGGGTACCCTTCGCGAGTTGAATAGCCAAAATCAGGCACACCCGGTGAA
AATGTGGCCAGGGTCGGGTAGTGGCCGGCGTTGGCCAATGATGTGGCGTC
CTGGGGCTGTTTCGGTCGTTGGATTAGAAGGGTACCCGATAATAGCCACA
TAACCATCGGATATACCCGATTTTGGCCATTCCTCTTTTCTTAAAAGTTG
GTCGTGGGTGCGATCTGTATACCTGTAGAACAGTACAGACAGCGATCGGC
CGTCTGTTTGAGTGTTCAGATAGAGGCTCGCATTACAATCATTTTCCCCC
TTCCTCGCACCGGGTACCCTTGGCGAGTTGAATAGCCAAAATCGGGCACA
CCCGGTGAAAATGTGGCCAGGGTCGGGTAGTAGCCGGCGTTGGCCAATGA
GGTGGCGTTCTAGGGCTGTTTCGGTTGTTGGATTAGAAGGGTACCCGATA
ATGGCCACATAACCATCGTGTATACCCGATTTTGGCCATTCCTCTCTCTT
AAAAGTTGGTGGTGCGTGCGATTTCTGTACCTGTAGAACAGTACAGACAG
CGATCGACCGTCTGTTTTAGTGTTCAGATAGAGGCTCGCATTACAATCAT
TTTCCCCCTTCCTCGCACCTTGAAGGCCCTACCCCTTTCGCTGTAATCGG
TAGCCATAACTCTACCTTCGCTGTCAGCGCTGACATCGATGTTGGTTTAG
AACCGTACTCCTGCAGAAATCCACGCAAAAGCATTATTAGTGCAAAGACG
AGTGTCAATGCCGTTGGGTGTGTTGTACGATTGCCTCTGTATTAATATAG
TATATTCCAAGTAGGAAGCGCCCGTCGTTTGTGGTTTGCGTAGAGGCTCG
TATTGTCGCGGTTTTACGCCCTTCCTCGCACCTCTACGGCTTGGCAGAAT
CGCGTGAAGGAGATCTTTCTAACAGTCCAAGAAAGCCCCACTCATCGCTC
GAGCTCGTTGAGCAGTCTTCTCTCAAAGTGCAGTTACTATTCCGGCGGTC
CATCATGGACAAATTTCGTTAGTACTGTAACACAGTAGAAAAGAGTCCGC
CAACAACCCTTTTCGCTGTAATCGGTAGCCATAGCTCAGCGCTGACATCG
ATGTTGGTTTAGAACCGTACTCCTGCAAACGGGACTGCGTTTGCGGGTCA
CTTTTGACCAAATATAATGCGCCTCTCTTTCCCACGCCCACTTTTGTGCC
ACCTGCTGCTTTTGTTAGGCAAACTATTATGGAAGGGGGCTGTTCTGCCG
GTGGTGATGGTCGAGGACAGGGAGGCAAGGCGCGTGCGAAAGACGAGATA
GCTGCGCCTAAGGTCCGTCAGACGAAAAGATGCTGTTGTGGTCAGGATTG
GTGTCCTAAGGACGCAAACGCTGCATTCAACGTACCAGCAGGCCCGGTGG
CGCGCGTAAATTGGGCACACGCTCTGAACGTAAGGGGTTTGATTTTCGGG
AAGGAATATCGCGTCTGTGCCCACCATTTCAATTATGAAGACTTCGAAGT
TTCATCTGCAAAGGAGCGTGAGGATGGCTCGCCAAGCGTACGTCTTCGCC
GAGGTGCCATCCCAAGTGTTGATGAAACTGCATATCGTAGTGCACTCAAG
ACGTCCGTGGAAGATTGTTTCCGGTGGCGGGCACTCGCAGAGAATCTTCT
GATTAAAGACGGTGGCGACAGGAAACCGAAGGAGTCTGCGTCTCCATCCC
CCAAAGACGTCGAGTCTGCGTCTCCATCCCCCGAAGACGTCGAACCTACA
AGCGTGCTGAGCGTCGGGGCACTGAACTCTATGGAGCAGAGACACCCTGG
TTGCGTGTTGACGCTGACAGGGTTTCCAAGCTTCAAGGCCCTCCAGGTGA
TTATTCCCATCTCCCTCGCTCTTTCATCATAAATATAATATGACACATCC
CGTTTAATTTCATGTTCATGTATATTGTCAACTAATCCTATACTTTGTCT
TTATGATTAAGTCACATTACTGTTGATCATGTCGGTAAGTGGACGCCCTT
CCACCTCTTTCTTCGCTGATCCAGTTACACGCGAAGTACGTCTCGGGCCA
CGGCGCGGTCCATTCGCACAAGCAGTACAACCCTGCGGACTTCCACGAAG
GAAATGAGTCTGCAGGAGGCGCGTCGAGGAGGAGGAGAAAGACAACTATG
GACGAGGCAAATTCTATCCTCTTCACACTGGTAATATTGCGGACTGGTAT
GCATCTGAACGTAGCGGCCGCCCTGTTTGGTCTGAGCAATAGCACAGCAG
GGCGTGTATTCATGACTTGGTTGTGTCTGTTGTGGAGTGCCCACTTCCCG
CTTGTAAGGATGCCAACATGGTCGGAAGTTGCCGATGGCTGTCCGACCTC
TGTTCGCGAACGAGGTATGGGCGAGGTCGCAGTGATGATCGATTGCACTG
AATTCACTGCCGAGCGGATGTCGATGAAGGATGCAGCACATTACTTGTTT
TCCCCGTACAAGCAACGGCCGACTGTCAAGTTTGTCGTAGGGATAACTAC
ATCCGGAGCTTTTTGTTATGTTTCCGACGGATACGGTGGAAGCATGACGG
ACAACGCCGTAGTAAGGAAATCGGGACTCCTTGACGTTCTTAAGGAACAA
AGATACCCAGAGGGGGCGGAGGTCCTTGCTGATAGCGGGTTCAACGGCCT
AGAGATGGACCTAATGAAAATAGGTATGTTCCTGTCCATGCCCCCATCTA
GCCGTGGACGCCTTGATGAGGCACGGTTCTCCGAGGAAGACGATGGATTC
TCGACTGATGAAGCCAAAAATGTGCTTCTTCATGTGGGGCGGGCTATTGG
AGGACTCAAAGAATGGAAGTATGTTGTACAACCTGTTACCTGGGACAGCC
TCGATCTGATCGATACGGCCGTGCAGCTTTGTGCAGCTCTGACGAACATG
CTCAGGCCCCCCTTTTGTGACACCTCGGACAGTGATTGACAGAGTAGCTT
AGATCTACACTCGTTCTTTTTATTCGAGTACACAGGGGAAGGATAAACTA
TCGTACAAGATGTACAATCCTGTACGGTAGTCATACAGGGGTGGAGGGGA
GGTTGTTGGGAGTTGTTCTCTCCCATTTATTCTTTGAGTTACTAGTAGGT
GACTCACATTAATGTTGGGGGCAGGGTCAAATTTGTGAGTCACACGAATG
GTTGCAAGGTGATTTCCAGGTTATGTTTATCAACAAAGACACGTTAAATT
GTCGTCTAGTACAGACTAAGTGGACCTTGTTGCCATGGCTCGGAGTATTA
GTTTC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1218:189511..196915+

>mRNA_A-nodosum_M_contig1218.28.1 ID=mRNA_A-nodosum_M_contig1218.28.1|Name=mRNA_A-nodosum_M_contig1218.28.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1533bp|location=Sequence derived from alignment at A-nodosum_M_contig1218:189511..196915+ (Ascophyllum nodosum dioecious)
ATGGAAGGGGGCTGTTCTGCCGGTGGTGATGGTCGAGGACAGGGAGGCAA
GGCGCGTGCGAAAGACGAGATAGCTGCGCCTAAGGTCCGTCAGACGAAAA
GATGCTGTTGTGGTCAGGATTGGTGTCCTAAGGACGCAAACGCTGCATTC
AACGTACCAGCAGGCCCGGTGGCGCGCGTAAATTGGGCACACGCTCTGAA
CGTAAGGGGTTTGATTTTCGGGAAGGAATATCGCGTCTGTGCCCACCATT
TCAATTATGAAGACTTCGAAGTTTCATCTGCAAAGGAGCGTGAGGATGGC
TCGCCAAGCGTACGTCTTCGCCGAGGTGCCATCCCAAGTGTTGATGAAAC
TGCATATCGTAGTGCACTCAAGACGTCCGTGGAAGATTGTTTCCGGTGGC
GGGCACTCGCAGAGAATCTTCTGATTAAAGACGGTGGCGACAGGAAACCG
AAGGAGTCTGCGTCTCCATCCCCCAAAGACGTCGAGTCTGCGTCTCCATC
CCCCGAAGACGTCGAACCTACAAGCGTGCTGAGCGTCGGGGCACTGAACT
CTATGGAGCAGAGACACCCTGGTTGCGTGTTGACGCTGACAGGGTTTCCA
AGCTTCAAGGCCCTCCAGTTACACGCGAAGTACGTCTCGGGCCACGGCGC
GGTCCATTCGCACAAGCAGTACAACCCTGCGGACTTCCACGAAGGAAATG
AGTCTGCAGGAGGCGCGTCGAGGAGGAGGAGAAAGACAACTATGGACGAG
GCAAATTCTATCCTCTTCACACTGGTAATATTGCGGACTGGTATGCATCT
GAACGTAGCGGCCGCCCTGTTTGGTCTGAGCAATAGCACAGCAGGGCGTG
TATTCATGACTTGGTTGTGTCTGTTGTGGAGTGCCCACTTCCCGCTTGTA
AGGATGCCAACATGGTCGGAAGTTGCCGATGGCTGTCCGACCTCTGTTCG
CGAACGAGGTATGGGCGAGGTCGCAGTGATGATCGATTGCACTGAATTCA
CTGCCGAGCGGATGTCGATGAAGGATGCAGCACATTACTTGTTTTCCCCG
TACAAGCAACGGCCGACTGTCAAGTTTGTCGTAGGGATAACTACATCCGG
AGCTTTTTGTTATGTTTCCGACGGATACGGTGGAAGCATGACGGACAACG
CCGTAGTAAGGAAATCGGGACTCCTTGACGTTCTTAAGGAACAAAGATAC
CCAGAGGGGGCGGAGGTCCTTGCTGATAGCGGGTTCAACGGCCTAGAGAT
GGACCTAATGAAAATAGGTATGTTCCTGTCCATGCCCCCATCTAGCCGTG
GACGCCTTGATGAGGCACGGTTCTCCGAGGAAGACGATGGATTCTCGACT
GATGAAGCCAAAAATGTGCTTCTTCATGTGGGGCGGGCTATTGGAGGACT
CAAAGAATGGAAGTATGTTGTACAACCTGTTACCTGGGACAGCCTCGATC
TGATCGATACGGCCGTGCAGCTTTGTGCAGCTCTGACGAACATGCTCAGG
CCCCCCTTTTGTGACACCTCGGACAGTGATTGA
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