mRNA_A-nodosum_M_contig1218.2.1 (mRNA) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1218.2.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI) HSP 1 Score: 399 bits (1025), Expect = 4.380e-131 Identity = 207/361 (57.34%), Postives = 262/361 (72.58%), Query Frame = 3
Query: 27 VSSFRDRLIRAIPLTAIKIVLVFWQIITQFSGVVNVQYPPAYENLLAALSVVDLNLGAILSLSCVVETNFYVRLILVTIAPVAVLGALVITYGVAMLRNGHSIHAKRVARNKHLAMGLFLLFAVYSSVSYTIFQTFVCDLLDSGVRYLRSDYDLICGTKTHVAYMTYAGFMIIVYPVGIPVVFA-WALFRNRDAIK-SSLVGTTDRSRVPPELGAIKDLWAPYKPSRYYYEVIECGRRIALTGLAVFIYPGSTAQVAIEALLAVVFSSVSEIVSPFAKPLDAWLYRCGTWVIFLSMYLALLLKMDATDEDSNSQDVFAGFLIAAHVGMVLFVIANAILSALKGLREVRAEEMPVVIQGPKR 1103
++S R+R+ IPLT+IKIVLV WQI+TQFS VVNV YP YE L+ L++V+ N G ILS SCVV+TNFY RL+ TI P+ VLGAL +TY V+ RN HS + A++KHL++ LF++F VYSSVS+ IFQTFVC+ LD GV YLR+DY L+C T TH A YAG MI VYP GIP F W + D +K + G+T ++ L ++DLWAPYKP RYY+EV+ECGRRIALTGLAVFIYPGS AQVA+E + A F +S+++SPFA PLDAWLYR G WVIF+SM+L LLLK+DA+DEDS SQ++FA LI+AHVGMVL + A+LS L +R + P+ IQG +R
Sbjct: 48 LNSLRNRIANGIPLTSIKIVLVAWQIVTQFSSVVNVVYPDVYEKFLSILNLVNFNFGFILSASCVVDTNFYGRLLFATIGPLVVLGALALTYAVSRSRNRHSPAGIQTAKHKHLSIALFIMFVVYSSVSFNIFQTFVCETLDDGVEYLRADYSLVCSTDTHTAMKVYAGLMIFVYPFGIPAFFTLWLVSNRHDLVKVDANGGSTATAKSLGNLQPMRDLWAPYKPRRYYFEVVECGRRIALTGLAVFIYPGSAAQVALEVVFAAFFIGISDVLSPFADPLDAWLYRSGAWVIFISMFLTLLLKVDASDEDSQSQELFAKLLISAHVGMVLAIAVQAVLSVKGSLVAMR--DQPIPIQGFRR 406
BLAST of mRNA_A-nodosum_M_contig1218.2.1 vs. uniprot
Match: A0A6H5KHA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA3_9PHAE) HSP 1 Score: 381 bits (978), Expect = 5.680e-124 Identity = 203/366 (55.46%), Postives = 259/366 (70.77%), Query Frame = 3
Query: 3 RSGRWERRVSSFRDRLIRAIPLTAIKIVLVFWQIITQFSGVVNVQYPPAYENLLAALSVVDLNLGAILSLSCVVETNFYVRLILVTIAPVAVLGALVITYGVAMLRNGHSIHAKRVARNKHLAMGLFLLFAVYSSVSYTIFQTFVCDLLDSGVRYLRSDYDLICGTKTHVAYMTYAGFMIIVYPVGIPVVFAWALFRNR-DAIKSSLVGTTDRSRVPPELGAIKDLWAPYKPSRYYYEVIECGRRIALTGLAVFIYPGSTAQVAIEALLAVVFSSVSEIVSPFAKPLDAWLYRCGTWVIFLSMYLALLLKMDATDEDSNSQDVFAGFLIAAHVGMVLFVIANAILSALK-GL----REVRAEEMPV 1082
R G+WER +S RD + AIPLTAIKI+LV WQI+TQF+ VV+V+YP YE LAAL++V+ NLG LS C+VETNFY RL TI P+A+LG L + +A N HS R A +KHL++ LF++FA+YSSVS+TIFQTF+C+ LD V YLR+DY L C T TH YAG M++VYP+GIP VFAW L NR D ++ GTT P L +KDLW PYKP RY+YE++ECGRRI LTGLAVF++PG+ AQVAIE A V E+++PF P+DAWLYR G V+F SMYLALLLK+DA+DE+S SQ VFA L+AAHV MVL V+ +++LSA K G+ ++V ++PV
Sbjct: 21 RVGKWERFLSC-RDAIAAAIPLTAIKIILVVWQIVTQFASVVDVEYPEIYERFLAALNLVNFNLGYFLSFLCLVETNFYGRLAFSTIVPLAILGGLAAKHAIAKRNNRHSQVGMREATDKHLSIALFIVFAIYSSVSFTIFQTFMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDLVQDRSGGTT----TPENLRPMKDLWEPYKPRRYFYELVECGRRIVLTGLAVFLFPGTAAQVAIEVAFAAGLLVVFEVLAPFVDPMDAWLYRSGALVVFFSMYLALLLKVDASDENSESQQVFAAVLVAAHVSMVLAVLLSSLLSAKKVGIEAMRKQVEVRDVPV 381
BLAST of mRNA_A-nodosum_M_contig1218.2.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE) HSP 1 Score: 395 bits (1015), Expect = 6.140e-122 Identity = 204/355 (57.46%), Postives = 259/355 (72.96%), Query Frame = 3
Query: 15 WERRVSSFRDRLIRAIPLTAIKIVLVFWQIITQFSGVVNVQYPPAYENLLAALSVVDLNLGAILSLSCVVETNFYVRLILVTIAPVAVLGALVITYGVAMLRNGHSIHAKRVARNKHLAMGLFLLFAVYSSVSYTIFQTFVCDLLDSGVRYLRSDYDLICGTKTHVAYMTYAGFMIIVYPVGIPVVFAWALFRNR-DAIKSSLVGTTDR--SRVP--PELGAIKDLWAPYKPSRYYYEVIECGRRIALTGLAVFIYPGSTAQVAIEALLAVVFSSVSEIVSPFAKPLDAWLYRCGTWVIFLSMYLALLLKMDATDEDSNSQDVFAGFLIAAHVGMVLFVIANAILSALKGLREVR 1064
W +R++S RDR+++A+PLT+IKIV+V WQI+TQFS VVNV YP YE+ LA L+VV+ +LG +LS+SC+V+ NFY RL T+ P+ V G L TY ++ RN HS + A++KHL++ LF+ F VYSSVS+ IFQTFVC+ LD GV YLR+DY L C T H A M YAG MI+VYPVGIP V++W L NR D +K VGT+ P L ++DLW+ YKP RYY+EV+ECGRRIALTGLA F+ P S AQVAIE +LA +F +VS+++SPFA P D WLYR G W+IF SMYLALLLK+DA+DEDS SQ FA LIAAHVGMVL V+ A+LS +GL +R
Sbjct: 720 WGKRLTSCRDRIVKAVPLTSIKIVVVAWQIVTQFSSVVNVVYPDIYESFLAVLNVVNFDLGFLLSVSCIVDVNFYGRLFFTTVGPLVVFGGLAATYAISRSRNRHSPAGMQAAKSKHLSIALFISFVVYSSVSFNIFQTFVCETLDDGVTYLRADYSLTCSTGVHTAMMAYAGLMILVYPVGIPTVYSWWLLSNRHDLVK---VGTSGNCLGGAPRLDHLQPMRDLWSSYKPRRYYFEVLECGRRIALTGLAAFLLPDSAAQVAIEVVLAAIFMAVSDVLSPFADPFDGWLYRTGAWIIFFSMYLALLLKVDASDEDSQSQAAFAKVLIAAHVGMVLVVLVQAVLSVRRGLVTMR 1071
BLAST of mRNA_A-nodosum_M_contig1218.2.1 vs. uniprot
Match: D7G8S0_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S0_ECTSI) HSP 1 Score: 352 bits (904), Expect = 3.070e-114 Identity = 184/342 (53.80%), Postives = 235/342 (68.71%), Query Frame = 3
Query: 15 WERRVSSFRDRLIRAIPLTAIKIVLVFWQIITQFSGVVNVQYPPAYENLLAALSVVDLNLGAILSLSCVVETNFYVRLILVTIAPVAVLGALVITYGVAMLRNGHSIHAKRVARNKHLAMGLFLLFAVYSSVSYTIFQTFVCDLLDSGVRYLRSDYDLICGTKTHVAYMTYAGFMIIVYPVGIPVVFAWALFRNRDAIKSSLVGTTDRSRVPP--ELGAIKDLWAPYKPSRYYYEVIECGRRIALTGLAVFIYPGSTAQVAIEALLAVVFSSVSEIVSPFAKPLDAWLYRCGTWVIFLSMYLALLLKMDATDEDSNSQDVFAGFLIAAHVGMVLFVIANAIL 1034
W +R++S R+R+ +PLT+IKIVLV WQI+TQFS V+NV YP YE L+ L+VV+ NLG ILS+SC+V++NFY TI P+ V GA +TY V+ RN HS + A++KHL++ LF++F VYSSV + IFQTFVC+ LD+G+ YLR+DY L C T H A M YAG MI VYPVGIP +AW L R + RVP L ++DLWAPYKP RYY+EV+ECG RIALTGLA F+ P S AQ AIE +LA +F +VS+++SPF P DAWLYR G W+ SMYLAL+ D +DED+ SQ VFA LIAAH GMV ++ A+L
Sbjct: 9 WGKRLTSCRERITNVVPLTSIKIVLVAWQIVTQFSSVLNVVYPGVYERFLSVLNVVNFNLGFILSVSCIVDSNFYGCRFFATICPLVVFGAQAVTYTVSKSRNRHSPAGMQAAKSKHLSITLFIMFVVYSSVPFNIFQTFVCERLDTGMDYLRADYSLTCYTGVHKAMMVYAGLMIFVYPVGIPAFYAWWLLFIRHYLVKVGAPNNFLERVPELDHLQPMRDLWAPYKPHRYYFEVVECGHRIALTGLAAFLLPNSAAQAAIEVVLAAIFVAVSDVLSPFVDPFDAWLYRIGGWITCFSMYLALV---DVSDEDNQSQAVFAKVLIAAHAGMVAVIVVQAVL 347
BLAST of mRNA_A-nodosum_M_contig1218.2.1 vs. uniprot
Match: D7FUB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB5_ECTSI) HSP 1 Score: 344 bits (882), Expect = 5.560e-110 Identity = 181/325 (55.69%), Postives = 227/325 (69.85%), Query Frame = 3
Query: 96 WQIITQFSGVVNVQYPPAYENLLAALSVVDLNLGAILSLSCVVETNFYVRLILVTIAPVAVLGALVITYGVAMLRNGHSIHAKRVARNKHLAMGLFLLFAVYSSVSYTIFQTFVCDLLDSGVRYLRSDYDLICGTKTHVAYMTYAGFMIIVYPVGIPVVFAWALFRNR-DAIKSSLVGTTDRSRVPPELGAIKDLWAPYKPSRYYYEVIECGRRIALTGLAVFIYPGSTAQVAIEALLAVVFSSVSEIVSPFAKPLDAWLYRCGTWVIFLSMYLALLLKMDATDEDSNSQDVFAGFLIAAHVGMVLFVIANAILSALK-GLREVR 1064
WQI+TQF+ VV+V+YP YE LAAL++V+ NLG LS CVVETNFY RL T+ P+A+LG L T+ +A N HS R A +KHL++ LF++FA YSSVS+TIFQTF+C+ LD V YLR+DY L C T TH YAG M++VYP+GIP VFAW L NR D ++ GT P L +KDLW PYKP RY+YE++ECGRRI LTGLAVF++PG+ AQVAIE A V E+++PF P+DA LYR G V+F SMYLALLLK+DA+DE S SQ VFA L+AAHV MVL V+ ++LSA K G+ +R
Sbjct: 29 WQIVTQFASVVDVEYPEIYERFLAALNLVNFNLGFFLSFLCVVETNFYGRLAFSTLLPLAILGGLAATHAIAKRNNRHSQVGMREATDKHLSIALFIVFATYSSVSFTIFQTFMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDLVRERSSGTA----TPENLRPMKDLWEPYKPRRYFYELVECGRRIGLTGLAVFLFPGTAAQVAIEVAFAAGLLVVFEVLAPFVDPVDAGLYRSGALVVFYSMYLALLLKVDASDESSESQQVFAAVLVAAHVSMVLAVLLRSLLSAKKVGIEAMR 349
BLAST of mRNA_A-nodosum_M_contig1218.2.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 367 bits (943), Expect = 1.950e-108 Identity = 190/340 (55.88%), Postives = 243/340 (71.47%), Query Frame = 3
Query: 15 WERRVSSFRDRLIRAIPLTAIKIVLVFWQIITQFSGVVNVQYPPAYENLLAALSVVDLNLGAILSLSCVVETNFYVRLILVTIAPVAVLGALVITYGVAMLRNGHSIHAKRVARNKHLAMGLFLLFAVYSSVSYTIFQTFVCDLLDSGVRYLRSDYDLICGTKTHVAYMTYAGFMIIVYPVGIPVVFAWALFRNRDAIKSSLVGTTDRSRVPPELGAIKDLWAPYKPSRYYYEVIECGRRIALTGLAVFIYPGSTAQVAIEALLAVVFSSVSEIVSPFAKPLDAWLYRCGTWVIFLSMYLALLLKMDATDEDSNSQDVFAGFLIAAHVGMVLFVIANAIL 1034
W R S+++ R+ + +PLTA+KIV+V WQI+TQ+S V V+YP AY++ L+ + VV+L+LG ILS +CV +TNFY RL++ TI PV VLG L TY VA RN H A R + +HL++ LF++F +Y++VSYTIF+TFVCD LD G YLR+DY L C T H AY YAG ++VYPVGIP VF W LF+NR +K DR EL DLW PYKPS YYYEV+EC RRIALTG AVFIYP S+AQVAI LLA VF VSEI+SPFA+P++ WLYR G +V+F SMYLALLL++D +DE SQ+VF+G ++ AHV M L V+A +L
Sbjct: 700 WRRTCSAWQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHELKQE-----DRES-QAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVVAQGLL 1033
BLAST of mRNA_A-nodosum_M_contig1218.2.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 365 bits (936), Expect = 1.620e-107 Identity = 187/340 (55.00%), Postives = 241/340 (70.88%), Query Frame = 3
Query: 15 WERRVSSFRDRLIRAIPLTAIKIVLVFWQIITQFSGVVNVQYPPAYENLLAALSVVDLNLGAILSLSCVVETNFYVRLILVTIAPVAVLGALVITYGVAMLRNGHSIHAKRVARNKHLAMGLFLLFAVYSSVSYTIFQTFVCDLLDSGVRYLRSDYDLICGTKTHVAYMTYAGFMIIVYPVGIPVVFAWALFRNRDAIKSSLVGTTDRSRVPPELGAIKDLWAPYKPSRYYYEVIECGRRIALTGLAVFIYPGSTAQVAIEALLAVVFSSVSEIVSPFAKPLDAWLYRCGTWVIFLSMYLALLLKMDATDEDSNSQDVFAGFLIAAHVGMVLFVIANAIL 1034
W R S+ + R+ + +PLTA+KIV+V WQI+TQ+S V ++YP AY++ L+ + VV+L+LG ILS +CV +TNFY RL++ TI PV VLG L TY VA RN H A R + +HL++ LF++F +Y++VSYTIF+TFVCD LD G YLR+DY L C T H AY YAG ++VYPVGIP +F W LF+NR +K DR EL DLW PYKPS YYYEV+EC RRIALTG AVFIYP S+AQVAI LLA VF VSEI+SPFA+P++ WLYR G +V+F SMYLALLL++D +DE SQ+VF+G ++ AHV M L V+ +L
Sbjct: 681 WRRTCSALQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHELKQE-----DREG-QAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVMAHVAMFLVVVVQGLL 1014
BLAST of mRNA_A-nodosum_M_contig1218.2.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI) HSP 1 Score: 355 bits (912), Expect = 2.050e-104 Identity = 186/342 (54.39%), Postives = 245/342 (71.64%), Query Frame = 3
Query: 9 GRWERRVSSFRDRLIRAIPLTAIKIVLVFWQIITQFSGVVNVQYPPAYENLLAALSVVDLNLGAILSLSCVVETNFYVRLILVTIAPVAVLGALVITYGVAMLRNGHSIHAKRVARNKHLAMGLFLLFAVYSSVSYTIFQTFVCDLLDSGVRYLRSDYDLICGTKTHVAYMTYAGFMIIVYPVGIPVVFAWALFRNRDAIKSSLVGTTDRSRVPPELGAIKDLWAPYKPSRYYYEVIECGRRIALTGLAVFIYPGSTAQVAIEALLAVVFSSVSEIVSPFAKPLDAWLYRCGTWVIFLSMYLALLLKMDATDEDSNSQDVFAGFLIAAHVGMVLFVIANAIL 1034
RW+++ S ++ R+ + +PLTAIKIV+V WQI+TQ+S V V+YP AY++ L+ + VV+L+LG ILSL+CV +T+FY RL+L TI P VLG L TY A V +++HL++ LF++F +Y++VSYTIF+TFVCD LD G YLRSDY L C T+TH AY YAG MI+VYPVGIP VF W LF++R +K G R+ + P DLW PYKPS YYYEV+EC RRIALTG AVFIYP S+AQVAI LLA+VF VSE +SPFA+P++ WLYR G +V+F SMYLALLL++D +DE + SQ+VF+G L+ AH M+L V+ +L
Sbjct: 703 SRWQQKRSVWQARMKKILPLTAIKIVVVVWQIVTQYSDVAGVEYPGAYKDFLSVVDVVNLDLGFILSLACVCDTDFYDRLLLTTICPAVVLGLLGCTY-----------LAMGVVKHRHLSVALFIMFVIYATVSYTIFETFVCDPLDDGNSYLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHELKQE--GRERRAVLKPAA----DLWEPYKPSTYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPVEMWLYRTGHYVVFASMYLALLLRVDVSDERNQSQEVFSGVLVIAHAAMLLVVVLQGLL 1027
BLAST of mRNA_A-nodosum_M_contig1218.2.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE) HSP 1 Score: 305 bits (781), Expect = 8.590e-89 Identity = 167/337 (49.55%), Postives = 224/337 (66.47%), Query Frame = 3
Query: 24 RVSSFRDRLIRAIPLTAIKIVLVFWQIITQFSGVVNVQYPPAYENLLAALSVVDLNLGAILSLSCVVETNFYVRLILVTIAPVAVLGALVITYGVAMLRNGHSIHAKRVARNKHLAMGLFLLFAVYSSVSYTIFQTFVCDLLDSGVRYLRSDYDLICGTKTHVAYMTYAGFMIIVYPVGIPVVFAWALFRNRDAIKSSLVGTTDRSRVPPELGAIKDLWAPYKPSRYYYEVIECGRRIALTGLAVFIYPGSTAQVAIEALLAVVFSSVSEIVSPFAKPLDAWLYRCGTWVIFLSMYLALLLKMDATDEDSNSQDVFAGFLIAAHVGMVLFVIANAIL 1034
R+S F ++ A PLT +KIV+V WQIITQF + YP Y++ L AL+ V+L++G ILS SCVV T+F+ RL++ TI PV VL L +T+ V RN S A R +NKHL+ LF++F +YSSVS+T+FQTFVCD LD GV YLR+DY L C T + A+ YA M+ VYP+GIP FAW L NR ++ + DR R+ L + DLW YKPSRYYYE+IE RRI LTG+AVF+ PGS+AQ+A+ LLAVVF +SE +SPF K +D LYR G V+ S+Y+ALLLK++ ++E S + F LI A+V M + ++ + L
Sbjct: 695 RLSRFHAFVVTAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQDFLNALTPVNLDIGFILSYSCVVITDFFDRLLIATIGPVVVLALLALTFVVGRKRNIDSEAAVRAVKNKHLSAALFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLRADYSLTCDTPRYGAFRGYAAVMVCVYPIGIPATFAWLLGSNRQDLQKA-----DRDRLA-NLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQMAVVLLLAVVFLFISESLSPFTKKIDMALYRWGNGVVLASIYVALLLKVNVSEEGSETLSAFVVVLILANVCMAITLVVQSFL 1025
BLAST of mRNA_A-nodosum_M_contig1218.2.1 vs. uniprot
Match: D7FM10_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM10_ECTSI) HSP 1 Score: 297 bits (761), Expect = 7.200e-86 Identity = 159/340 (46.76%), Postives = 226/340 (66.47%), Query Frame = 3
Query: 18 ERRVSSFRDRLIRAIPLTAIKIVLVFWQIITQFSGVVNVQYPPAYENLLAALSVVDLNLGAILSLSCVVE-TNFYVRLILVTIAPVAVLGALVITYGVAMLRNGHSIHAK-RVARNKHLAMGLFLLFAVYSSVSYTIFQTFVCDLLDSGVRYLRSDYDLICGTKTHVAYMTYAGFMIIVYPVGIPVVFAWALFRNRDAIKSSLVGTTDRSRVPPELGAIKDLWAPYKPSRYYYEVIECGRRIALTGLAVFIYPGSTAQVAIEALLAVVFSSVSEIVSPFAKPLDAWLYRCGTWVIFLSMYLALLLKMDATDEDSNSQDVFAGFLIAAHVGMVLFVIANAI 1031
ER + F + +AIPL + KI++V WQI+TQF+ NV YP Y++ L+A+ V++++LG+++S C+ +F+ RL++ TIAP+ +G L TY VA+ RN + HA + R+KH+ + LF+ F VYSSVS +FQTF CD LD G YLR+DY ++C T H+A YAG M++VYPVGIP+++A LF++RD + ++ + D++ P I LW YKP R+YYEVIECGRRI LTG+ VFIYP AQ+AI L+AV F +V +I+SP+ D WL R G V+FLSM+ LLLK+D + E S SQ +AG L+A HV M L + A +
Sbjct: 679 ERNIGCFHRKTFQAIPLQSFKIIIVVWQILTQFAAAANVTYPRVYQDFLSAIDVINVDLGSMISAGCLWSGIDFHDRLLVSTIAPLLAIGMLASTYLVALRRNATAGHAIIEIIRHKHVTVLLFVTFLVYSSVSSMVFQTFACDSLDDGNNYLRADYRILCTTSKHLALQVYAGVMVVVYPVGIPLLYAILLFQHRDILANA---SADKAGAQP----IASLWEAYKPERFYYEVIECGRRIMLTGVVVFIYPNDAAQIAITILIAVFFFAVFDILSPYTSEFDMWLSRGGQVVVFLSMFDLLLLKVDVSHERSQSQQAYAGVLVAGHVLMFLAISAEVV 1011 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1218.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1218.2.1 >prot_A-nodosum_M_contig1218.2.1 ID=prot_A-nodosum_M_contig1218.2.1|Name=mRNA_A-nodosum_M_contig1218.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=303bp MLRNGHSIHAKRVARNKHLAMGLFLLFAVYSSVSYTIFQTFVCDLLDSGVback to top mRNA from alignment at A-nodosum_M_contig1218:26822..28717+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1218.2.1 ID=mRNA_A-nodosum_M_contig1218.2.1|Name=mRNA_A-nodosum_M_contig1218.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1896bp|location=Sequence derived from alignment at A-nodosum_M_contig1218:26822..28717+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1218:26822..28717+ >mRNA_A-nodosum_M_contig1218.2.1 ID=mRNA_A-nodosum_M_contig1218.2.1|Name=mRNA_A-nodosum_M_contig1218.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=909bp|location=Sequence derived from alignment at A-nodosum_M_contig1218:26822..28717+ (Ascophyllum nodosum dioecious)back to top |