mRNA_A-nodosum_M_contig1218.2.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1218.2.1
Unique NamemRNA_A-nodosum_M_contig1218.2.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig1218.2.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI)

HSP 1 Score: 399 bits (1025), Expect = 4.380e-131
Identity = 207/361 (57.34%), Postives = 262/361 (72.58%), Query Frame = 3
Query:   27 VSSFRDRLIRAIPLTAIKIVLVFWQIITQFSGVVNVQYPPAYENLLAALSVVDLNLGAILSLSCVVETNFYVRLILVTIAPVAVLGALVITYGVAMLRNGHSIHAKRVARNKHLAMGLFLLFAVYSSVSYTIFQTFVCDLLDSGVRYLRSDYDLICGTKTHVAYMTYAGFMIIVYPVGIPVVFA-WALFRNRDAIK-SSLVGTTDRSRVPPELGAIKDLWAPYKPSRYYYEVIECGRRIALTGLAVFIYPGSTAQVAIEALLAVVFSSVSEIVSPFAKPLDAWLYRCGTWVIFLSMYLALLLKMDATDEDSNSQDVFAGFLIAAHVGMVLFVIANAILSALKGLREVRAEEMPVVIQGPKR 1103
            ++S R+R+   IPLT+IKIVLV WQI+TQFS VVNV YP  YE  L+ L++V+ N G ILS SCVV+TNFY RL+  TI P+ VLGAL +TY V+  RN HS    + A++KHL++ LF++F VYSSVS+ IFQTFVC+ LD GV YLR+DY L+C T TH A   YAG MI VYP GIP  F  W +    D +K  +  G+T  ++    L  ++DLWAPYKP RYY+EV+ECGRRIALTGLAVFIYPGS AQVA+E + A  F  +S+++SPFA PLDAWLYR G WVIF+SM+L LLLK+DA+DEDS SQ++FA  LI+AHVGMVL +   A+LS    L  +R  + P+ IQG +R
Sbjct:   48 LNSLRNRIANGIPLTSIKIVLVAWQIVTQFSSVVNVVYPDVYEKFLSILNLVNFNFGFILSASCVVDTNFYGRLLFATIGPLVVLGALALTYAVSRSRNRHSPAGIQTAKHKHLSIALFIMFVVYSSVSFNIFQTFVCETLDDGVEYLRADYSLVCSTDTHTAMKVYAGLMIFVYPFGIPAFFTLWLVSNRHDLVKVDANGGSTATAKSLGNLQPMRDLWAPYKPRRYYFEVVECGRRIALTGLAVFIYPGSAAQVALEVVFAAFFIGISDVLSPFADPLDAWLYRSGAWVIFISMFLTLLLKVDASDEDSQSQELFAKLLISAHVGMVLAIAVQAVLSVKGSLVAMR--DQPIPIQGFRR 406          
BLAST of mRNA_A-nodosum_M_contig1218.2.1 vs. uniprot
Match: A0A6H5KHA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA3_9PHAE)

HSP 1 Score: 381 bits (978), Expect = 5.680e-124
Identity = 203/366 (55.46%), Postives = 259/366 (70.77%), Query Frame = 3
Query:    3 RSGRWERRVSSFRDRLIRAIPLTAIKIVLVFWQIITQFSGVVNVQYPPAYENLLAALSVVDLNLGAILSLSCVVETNFYVRLILVTIAPVAVLGALVITYGVAMLRNGHSIHAKRVARNKHLAMGLFLLFAVYSSVSYTIFQTFVCDLLDSGVRYLRSDYDLICGTKTHVAYMTYAGFMIIVYPVGIPVVFAWALFRNR-DAIKSSLVGTTDRSRVPPELGAIKDLWAPYKPSRYYYEVIECGRRIALTGLAVFIYPGSTAQVAIEALLAVVFSSVSEIVSPFAKPLDAWLYRCGTWVIFLSMYLALLLKMDATDEDSNSQDVFAGFLIAAHVGMVLFVIANAILSALK-GL----REVRAEEMPV 1082
            R G+WER +S  RD +  AIPLTAIKI+LV WQI+TQF+ VV+V+YP  YE  LAAL++V+ NLG  LS  C+VETNFY RL   TI P+A+LG L   + +A   N HS    R A +KHL++ LF++FA+YSSVS+TIFQTF+C+ LD  V YLR+DY L C T TH     YAG M++VYP+GIP VFAW L  NR D ++    GTT     P  L  +KDLW PYKP RY+YE++ECGRRI LTGLAVF++PG+ AQVAIE   A     V E+++PF  P+DAWLYR G  V+F SMYLALLLK+DA+DE+S SQ VFA  L+AAHV MVL V+ +++LSA K G+    ++V   ++PV
Sbjct:   21 RVGKWERFLSC-RDAIAAAIPLTAIKIILVVWQIVTQFASVVDVEYPEIYERFLAALNLVNFNLGYFLSFLCLVETNFYGRLAFSTIVPLAILGGLAAKHAIAKRNNRHSQVGMREATDKHLSIALFIVFAIYSSVSFTIFQTFMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDLVQDRSGGTT----TPENLRPMKDLWEPYKPRRYFYELVECGRRIVLTGLAVFLFPGTAAQVAIEVAFAAGLLVVFEVLAPFVDPMDAWLYRSGALVVFFSMYLALLLKVDASDENSESQQVFAAVLVAAHVSMVLAVLLSSLLSAKKVGIEAMRKQVEVRDVPV 381          
BLAST of mRNA_A-nodosum_M_contig1218.2.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE)

HSP 1 Score: 395 bits (1015), Expect = 6.140e-122
Identity = 204/355 (57.46%), Postives = 259/355 (72.96%), Query Frame = 3
Query:   15 WERRVSSFRDRLIRAIPLTAIKIVLVFWQIITQFSGVVNVQYPPAYENLLAALSVVDLNLGAILSLSCVVETNFYVRLILVTIAPVAVLGALVITYGVAMLRNGHSIHAKRVARNKHLAMGLFLLFAVYSSVSYTIFQTFVCDLLDSGVRYLRSDYDLICGTKTHVAYMTYAGFMIIVYPVGIPVVFAWALFRNR-DAIKSSLVGTTDR--SRVP--PELGAIKDLWAPYKPSRYYYEVIECGRRIALTGLAVFIYPGSTAQVAIEALLAVVFSSVSEIVSPFAKPLDAWLYRCGTWVIFLSMYLALLLKMDATDEDSNSQDVFAGFLIAAHVGMVLFVIANAILSALKGLREVR 1064
            W +R++S RDR+++A+PLT+IKIV+V WQI+TQFS VVNV YP  YE+ LA L+VV+ +LG +LS+SC+V+ NFY RL   T+ P+ V G L  TY ++  RN HS    + A++KHL++ LF+ F VYSSVS+ IFQTFVC+ LD GV YLR+DY L C T  H A M YAG MI+VYPVGIP V++W L  NR D +K   VGT+       P    L  ++DLW+ YKP RYY+EV+ECGRRIALTGLA F+ P S AQVAIE +LA +F +VS+++SPFA P D WLYR G W+IF SMYLALLLK+DA+DEDS SQ  FA  LIAAHVGMVL V+  A+LS  +GL  +R
Sbjct:  720 WGKRLTSCRDRIVKAVPLTSIKIVVVAWQIVTQFSSVVNVVYPDIYESFLAVLNVVNFDLGFLLSVSCIVDVNFYGRLFFTTVGPLVVFGGLAATYAISRSRNRHSPAGMQAAKSKHLSIALFISFVVYSSVSFNIFQTFVCETLDDGVTYLRADYSLTCSTGVHTAMMAYAGLMILVYPVGIPTVYSWWLLSNRHDLVK---VGTSGNCLGGAPRLDHLQPMRDLWSSYKPRRYYFEVLECGRRIALTGLAAFLLPDSAAQVAIEVVLAAIFMAVSDVLSPFADPFDGWLYRTGAWIIFFSMYLALLLKVDASDEDSQSQAAFAKVLIAAHVGMVLVVLVQAVLSVRRGLVTMR 1071          
BLAST of mRNA_A-nodosum_M_contig1218.2.1 vs. uniprot
Match: D7G8S0_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S0_ECTSI)

HSP 1 Score: 352 bits (904), Expect = 3.070e-114
Identity = 184/342 (53.80%), Postives = 235/342 (68.71%), Query Frame = 3
Query:   15 WERRVSSFRDRLIRAIPLTAIKIVLVFWQIITQFSGVVNVQYPPAYENLLAALSVVDLNLGAILSLSCVVETNFYVRLILVTIAPVAVLGALVITYGVAMLRNGHSIHAKRVARNKHLAMGLFLLFAVYSSVSYTIFQTFVCDLLDSGVRYLRSDYDLICGTKTHVAYMTYAGFMIIVYPVGIPVVFAWALFRNRDAIKSSLVGTTDRSRVPP--ELGAIKDLWAPYKPSRYYYEVIECGRRIALTGLAVFIYPGSTAQVAIEALLAVVFSSVSEIVSPFAKPLDAWLYRCGTWVIFLSMYLALLLKMDATDEDSNSQDVFAGFLIAAHVGMVLFVIANAIL 1034
            W +R++S R+R+   +PLT+IKIVLV WQI+TQFS V+NV YP  YE  L+ L+VV+ NLG ILS+SC+V++NFY      TI P+ V GA  +TY V+  RN HS    + A++KHL++ LF++F VYSSV + IFQTFVC+ LD+G+ YLR+DY L C T  H A M YAG MI VYPVGIP  +AW L   R  +           RVP    L  ++DLWAPYKP RYY+EV+ECG RIALTGLA F+ P S AQ AIE +LA +F +VS+++SPF  P DAWLYR G W+   SMYLAL+   D +DED+ SQ VFA  LIAAH GMV  ++  A+L
Sbjct:    9 WGKRLTSCRERITNVVPLTSIKIVLVAWQIVTQFSSVLNVVYPGVYERFLSVLNVVNFNLGFILSVSCIVDSNFYGCRFFATICPLVVFGAQAVTYTVSKSRNRHSPAGMQAAKSKHLSITLFIMFVVYSSVPFNIFQTFVCERLDTGMDYLRADYSLTCYTGVHKAMMVYAGLMIFVYPVGIPAFYAWWLLFIRHYLVKVGAPNNFLERVPELDHLQPMRDLWAPYKPHRYYFEVVECGHRIALTGLAAFLLPNSAAQAAIEVVLAAIFVAVSDVLSPFVDPFDAWLYRIGGWITCFSMYLALV---DVSDEDNQSQAVFAKVLIAAHAGMVAVIVVQAVL 347          
BLAST of mRNA_A-nodosum_M_contig1218.2.1 vs. uniprot
Match: D7FUB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB5_ECTSI)

HSP 1 Score: 344 bits (882), Expect = 5.560e-110
Identity = 181/325 (55.69%), Postives = 227/325 (69.85%), Query Frame = 3
Query:   96 WQIITQFSGVVNVQYPPAYENLLAALSVVDLNLGAILSLSCVVETNFYVRLILVTIAPVAVLGALVITYGVAMLRNGHSIHAKRVARNKHLAMGLFLLFAVYSSVSYTIFQTFVCDLLDSGVRYLRSDYDLICGTKTHVAYMTYAGFMIIVYPVGIPVVFAWALFRNR-DAIKSSLVGTTDRSRVPPELGAIKDLWAPYKPSRYYYEVIECGRRIALTGLAVFIYPGSTAQVAIEALLAVVFSSVSEIVSPFAKPLDAWLYRCGTWVIFLSMYLALLLKMDATDEDSNSQDVFAGFLIAAHVGMVLFVIANAILSALK-GLREVR 1064
            WQI+TQF+ VV+V+YP  YE  LAAL++V+ NLG  LS  CVVETNFY RL   T+ P+A+LG L  T+ +A   N HS    R A +KHL++ LF++FA YSSVS+TIFQTF+C+ LD  V YLR+DY L C T TH     YAG M++VYP+GIP VFAW L  NR D ++    GT      P  L  +KDLW PYKP RY+YE++ECGRRI LTGLAVF++PG+ AQVAIE   A     V E+++PF  P+DA LYR G  V+F SMYLALLLK+DA+DE S SQ VFA  L+AAHV MVL V+  ++LSA K G+  +R
Sbjct:   29 WQIVTQFASVVDVEYPEIYERFLAALNLVNFNLGFFLSFLCVVETNFYGRLAFSTLLPLAILGGLAATHAIAKRNNRHSQVGMREATDKHLSIALFIVFATYSSVSFTIFQTFMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDLVRERSSGTA----TPENLRPMKDLWEPYKPRRYFYELVECGRRIGLTGLAVFLFPGTAAQVAIEVAFAAGLLVVFEVLAPFVDPVDAGLYRSGALVVFYSMYLALLLKVDASDESSESQQVFAAVLVAAHVSMVLAVLLRSLLSAKKVGIEAMR 349          
BLAST of mRNA_A-nodosum_M_contig1218.2.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI)

HSP 1 Score: 367 bits (943), Expect = 1.950e-108
Identity = 190/340 (55.88%), Postives = 243/340 (71.47%), Query Frame = 3
Query:   15 WERRVSSFRDRLIRAIPLTAIKIVLVFWQIITQFSGVVNVQYPPAYENLLAALSVVDLNLGAILSLSCVVETNFYVRLILVTIAPVAVLGALVITYGVAMLRNGHSIHAKRVARNKHLAMGLFLLFAVYSSVSYTIFQTFVCDLLDSGVRYLRSDYDLICGTKTHVAYMTYAGFMIIVYPVGIPVVFAWALFRNRDAIKSSLVGTTDRSRVPPELGAIKDLWAPYKPSRYYYEVIECGRRIALTGLAVFIYPGSTAQVAIEALLAVVFSSVSEIVSPFAKPLDAWLYRCGTWVIFLSMYLALLLKMDATDEDSNSQDVFAGFLIAAHVGMVLFVIANAIL 1034
            W R  S+++ R+ + +PLTA+KIV+V WQI+TQ+S V  V+YP AY++ L+ + VV+L+LG ILS +CV +TNFY RL++ TI PV VLG L  TY VA  RN H   A R  + +HL++ LF++F +Y++VSYTIF+TFVCD LD G  YLR+DY L C T  H AY  YAG  ++VYPVGIP VF W LF+NR  +K       DR     EL    DLW PYKPS YYYEV+EC RRIALTG AVFIYP S+AQVAI  LLA VF  VSEI+SPFA+P++ WLYR G +V+F SMYLALLL++D +DE   SQ+VF+G ++ AHV M L V+A  +L
Sbjct:  700 WRRTCSAWQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHELKQE-----DRES-QAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVVAQGLL 1033          
BLAST of mRNA_A-nodosum_M_contig1218.2.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE)

HSP 1 Score: 365 bits (936), Expect = 1.620e-107
Identity = 187/340 (55.00%), Postives = 241/340 (70.88%), Query Frame = 3
Query:   15 WERRVSSFRDRLIRAIPLTAIKIVLVFWQIITQFSGVVNVQYPPAYENLLAALSVVDLNLGAILSLSCVVETNFYVRLILVTIAPVAVLGALVITYGVAMLRNGHSIHAKRVARNKHLAMGLFLLFAVYSSVSYTIFQTFVCDLLDSGVRYLRSDYDLICGTKTHVAYMTYAGFMIIVYPVGIPVVFAWALFRNRDAIKSSLVGTTDRSRVPPELGAIKDLWAPYKPSRYYYEVIECGRRIALTGLAVFIYPGSTAQVAIEALLAVVFSSVSEIVSPFAKPLDAWLYRCGTWVIFLSMYLALLLKMDATDEDSNSQDVFAGFLIAAHVGMVLFVIANAIL 1034
            W R  S+ + R+ + +PLTA+KIV+V WQI+TQ+S V  ++YP AY++ L+ + VV+L+LG ILS +CV +TNFY RL++ TI PV VLG L  TY VA  RN H   A R  + +HL++ LF++F +Y++VSYTIF+TFVCD LD G  YLR+DY L C T  H AY  YAG  ++VYPVGIP +F W LF+NR  +K       DR     EL    DLW PYKPS YYYEV+EC RRIALTG AVFIYP S+AQVAI  LLA VF  VSEI+SPFA+P++ WLYR G +V+F SMYLALLL++D +DE   SQ+VF+G ++ AHV M L V+   +L
Sbjct:  681 WRRTCSALQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHELKQE-----DREG-QAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVMAHVAMFLVVVVQGLL 1014          
BLAST of mRNA_A-nodosum_M_contig1218.2.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI)

HSP 1 Score: 355 bits (912), Expect = 2.050e-104
Identity = 186/342 (54.39%), Postives = 245/342 (71.64%), Query Frame = 3
Query:    9 GRWERRVSSFRDRLIRAIPLTAIKIVLVFWQIITQFSGVVNVQYPPAYENLLAALSVVDLNLGAILSLSCVVETNFYVRLILVTIAPVAVLGALVITYGVAMLRNGHSIHAKRVARNKHLAMGLFLLFAVYSSVSYTIFQTFVCDLLDSGVRYLRSDYDLICGTKTHVAYMTYAGFMIIVYPVGIPVVFAWALFRNRDAIKSSLVGTTDRSRVPPELGAIKDLWAPYKPSRYYYEVIECGRRIALTGLAVFIYPGSTAQVAIEALLAVVFSSVSEIVSPFAKPLDAWLYRCGTWVIFLSMYLALLLKMDATDEDSNSQDVFAGFLIAAHVGMVLFVIANAIL 1034
             RW+++ S ++ R+ + +PLTAIKIV+V WQI+TQ+S V  V+YP AY++ L+ + VV+L+LG ILSL+CV +T+FY RL+L TI P  VLG L  TY            A  V +++HL++ LF++F +Y++VSYTIF+TFVCD LD G  YLRSDY L C T+TH AY  YAG MI+VYPVGIP VF W LF++R  +K    G   R+ + P      DLW PYKPS YYYEV+EC RRIALTG AVFIYP S+AQVAI  LLA+VF  VSE +SPFA+P++ WLYR G +V+F SMYLALLL++D +DE + SQ+VF+G L+ AH  M+L V+   +L
Sbjct:  703 SRWQQKRSVWQARMKKILPLTAIKIVVVVWQIVTQYSDVAGVEYPGAYKDFLSVVDVVNLDLGFILSLACVCDTDFYDRLLLTTICPAVVLGLLGCTY-----------LAMGVVKHRHLSVALFIMFVIYATVSYTIFETFVCDPLDDGNSYLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHELKQE--GRERRAVLKPAA----DLWEPYKPSTYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPVEMWLYRTGHYVVFASMYLALLLRVDVSDERNQSQEVFSGVLVIAHAAMLLVVVLQGLL 1027          
BLAST of mRNA_A-nodosum_M_contig1218.2.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE)

HSP 1 Score: 305 bits (781), Expect = 8.590e-89
Identity = 167/337 (49.55%), Postives = 224/337 (66.47%), Query Frame = 3
Query:   24 RVSSFRDRLIRAIPLTAIKIVLVFWQIITQFSGVVNVQYPPAYENLLAALSVVDLNLGAILSLSCVVETNFYVRLILVTIAPVAVLGALVITYGVAMLRNGHSIHAKRVARNKHLAMGLFLLFAVYSSVSYTIFQTFVCDLLDSGVRYLRSDYDLICGTKTHVAYMTYAGFMIIVYPVGIPVVFAWALFRNRDAIKSSLVGTTDRSRVPPELGAIKDLWAPYKPSRYYYEVIECGRRIALTGLAVFIYPGSTAQVAIEALLAVVFSSVSEIVSPFAKPLDAWLYRCGTWVIFLSMYLALLLKMDATDEDSNSQDVFAGFLIAAHVGMVLFVIANAIL 1034
            R+S F   ++ A PLT +KIV+V WQIITQF  +    YP  Y++ L AL+ V+L++G ILS SCVV T+F+ RL++ TI PV VL  L +T+ V   RN  S  A R  +NKHL+  LF++F +YSSVS+T+FQTFVCD LD GV YLR+DY L C T  + A+  YA  M+ VYP+GIP  FAW L  NR  ++ +     DR R+   L  + DLW  YKPSRYYYE+IE  RRI LTG+AVF+ PGS+AQ+A+  LLAVVF  +SE +SPF K +D  LYR G  V+  S+Y+ALLLK++ ++E S +   F   LI A+V M + ++  + L
Sbjct:  695 RLSRFHAFVVTAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQDFLNALTPVNLDIGFILSYSCVVITDFFDRLLIATIGPVVVLALLALTFVVGRKRNIDSEAAVRAVKNKHLSAALFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLRADYSLTCDTPRYGAFRGYAAVMVCVYPIGIPATFAWLLGSNRQDLQKA-----DRDRLA-NLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQMAVVLLLAVVFLFISESLSPFTKKIDMALYRWGNGVVLASIYVALLLKVNVSEEGSETLSAFVVVLILANVCMAITLVVQSFL 1025          
BLAST of mRNA_A-nodosum_M_contig1218.2.1 vs. uniprot
Match: D7FM10_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM10_ECTSI)

HSP 1 Score: 297 bits (761), Expect = 7.200e-86
Identity = 159/340 (46.76%), Postives = 226/340 (66.47%), Query Frame = 3
Query:   18 ERRVSSFRDRLIRAIPLTAIKIVLVFWQIITQFSGVVNVQYPPAYENLLAALSVVDLNLGAILSLSCVVE-TNFYVRLILVTIAPVAVLGALVITYGVAMLRNGHSIHAK-RVARNKHLAMGLFLLFAVYSSVSYTIFQTFVCDLLDSGVRYLRSDYDLICGTKTHVAYMTYAGFMIIVYPVGIPVVFAWALFRNRDAIKSSLVGTTDRSRVPPELGAIKDLWAPYKPSRYYYEVIECGRRIALTGLAVFIYPGSTAQVAIEALLAVVFSSVSEIVSPFAKPLDAWLYRCGTWVIFLSMYLALLLKMDATDEDSNSQDVFAGFLIAAHVGMVLFVIANAI 1031
            ER +  F  +  +AIPL + KI++V WQI+TQF+   NV YP  Y++ L+A+ V++++LG+++S  C+    +F+ RL++ TIAP+  +G L  TY VA+ RN  + HA   + R+KH+ + LF+ F VYSSVS  +FQTF CD LD G  YLR+DY ++C T  H+A   YAG M++VYPVGIP+++A  LF++RD + ++   + D++   P    I  LW  YKP R+YYEVIECGRRI LTG+ VFIYP   AQ+AI  L+AV F +V +I+SP+    D WL R G  V+FLSM+  LLLK+D + E S SQ  +AG L+A HV M L + A  +
Sbjct:  679 ERNIGCFHRKTFQAIPLQSFKIIIVVWQILTQFAAAANVTYPRVYQDFLSAIDVINVDLGSMISAGCLWSGIDFHDRLLVSTIAPLLAIGMLASTYLVALRRNATAGHAIIEIIRHKHVTVLLFVTFLVYSSVSSMVFQTFACDSLDDGNNYLRADYRILCTTSKHLALQVYAGVMVVVYPVGIPLLYAILLFQHRDILANA---SADKAGAQP----IASLWEAYKPERFYYEVIECGRRIMLTGVVVFIYPNDAAQIAITILIAVFFFAVFDILSPYTSEFDMWLSRGGQVVVFLSMFDLLLLKVDVSHERSQSQQAYAGVLVAGHVLMFLAISAEVV 1011          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1218.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPF7_ECTSI4.380e-13157.34Probable extracellular nuclease (ISS) n=1 Tax=Ecto... [more]
A0A6H5KHA3_9PHAE5.680e-12455.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWI3_9PHAE6.140e-12257.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8S0_ECTSI3.070e-11453.80Probable extracellular nuclease (ISS) n=1 Tax=Ecto... [more]
D7FUB5_ECTSI5.560e-11055.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTT9_ECTSI1.950e-10855.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L324_9PHAE1.620e-10755.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTU5_ECTSI2.050e-10454.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSF5_9PHAE8.590e-8949.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FM10_ECTSI7.200e-8646.76Probable extracellular nuclease n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1218contigA-nodosum_M_contig1218:26822..28717 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FPF7
Model size1723
Max annot lvl2880.D7FPF7|-
Hectar predicted targeting categorysignal peptide
Exons2
Evalue2.41e-95
EggNOG OGs2D43J@1|root,2STRI@2759|Eukaryota
Cds size909
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866641.462721-UTR-A-nodosum_M_contig1218:26821..269341680866641.462721-UTR-A-nodosum_M_contig1218:26821..26934Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1218 26822..26934 +
1680866641.4771147-UTR-A-nodosum_M_contig1218:27107..273051680866641.4771147-UTR-A-nodosum_M_contig1218:27107..27305Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1218 27108..27305 +
1680866641.4977458-UTR-A-nodosum_M_contig1218:28214..287171680866641.4977458-UTR-A-nodosum_M_contig1218:28214..28717Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1218 28215..28717 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866641.4877963-CDS-A-nodosum_M_contig1218:27305..282141680866641.4877963-CDS-A-nodosum_M_contig1218:27305..28214Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1218 27306..28214 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1218.2.1prot_A-nodosum_M_contig1218.2.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1218 27306..28214 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1218.2.1

>prot_A-nodosum_M_contig1218.2.1 ID=prot_A-nodosum_M_contig1218.2.1|Name=mRNA_A-nodosum_M_contig1218.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=303bp
MLRNGHSIHAKRVARNKHLAMGLFLLFAVYSSVSYTIFQTFVCDLLDSGV
RYLRSDYDLICGTKTHVAYMTYAGFMIIVYPVGIPVVFAWALFRNRDAIK
SSLVGTTDRSRVPPELGAIKDLWAPYKPSRYYYEVIECGRRIALTGLAVF
IYPGSTAQVAIEALLAVVFSSVSEIVSPFAKPLDAWLYRCGTWVIFLSMY
LALLLKMDATDEDSNSQDVFAGFLIAAHVGMVLFVIANAILSALKGLREV
RAEEMPVVIQGPKRHGSTSTRDNDIEILEEDKDDAASEYNSNPMFPGRRQ
NH*
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mRNA from alignment at A-nodosum_M_contig1218:26822..28717+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1218.2.1 ID=mRNA_A-nodosum_M_contig1218.2.1|Name=mRNA_A-nodosum_M_contig1218.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1896bp|location=Sequence derived from alignment at A-nodosum_M_contig1218:26822..28717+ (Ascophyllum nodosum dioecious)
AGAGAAGTGGAAGGTGGGAGAGGCGGGTCTCGAGCTTCCGAGATCGATTA ATACGCGCCATTCCCCTCACGGCTATCAAGATTGTGCTGGTTTTCTGGCA GATCATCACGCAGGTAACGTTTGTTGCTATATAATACCGTCGAGAACCGT GGCCGTAGAACAACGGGAGTGGGTATGTAAACTAAGGGTTGATGTATTTC TGTAGCCATTTGAATCAACCGTCTTTGCTCTAAATCCACGCACCCGTGCA TCGTGTGGCCGATCTCCCCACTATCCTGTGACACAGTTTTCCGGCGTGGT AAACGTCCAGTACCCTCCTGCGTACGAAAACCTTCTGGCAGCGCTAAGCG TCGTCGACCTTAATTTGGGGGCCATCCTGTCACTCTCGTGCGTCGTGGAG ACAAACTTTTACGTCCGGCTAATTTTGGTGACGATCGCTCCGGTGGCGGT GCTTGGTGCGCTGGTGATTACCTATGGAGTTGCCATGTTACGGAATGGTC ACTCGATCCATGCGAAGCGGGTGGCAAGGAACAAGCACCTCGCCATGGGG CTTTTTCTACTCTTCGCCGTGTACTCTTCAGTGTCCTACACGATTTTTCA GACCTTTGTCTGTGACCTCTTGGACTCCGGGGTTCGCTATCTGCGCTCTG ACTACGATTTAATATGCGGGACCAAAACCCACGTCGCATATATGACGTAC GCAGGGTTTATGATTATCGTGTACCCTGTCGGAATCCCGGTAGTGTTTGC TTGGGCGCTCTTTAGAAATCGGGATGCCATCAAGAGTAGTCTAGTAGGTA CCACTGATAGAAGCCGGGTTCCGCCAGAGCTAGGGGCTATCAAAGACCTC TGGGCACCGTACAAGCCGAGCCGTTACTACTACGAGGTTATCGAGTGCGG TCGGCGGATTGCACTGACAGGTCTCGCCGTCTTCATCTACCCCGGCAGCA CGGCGCAGGTGGCAATCGAAGCACTTTTAGCTGTCGTCTTCTCCTCTGTT TCCGAGATTGTCAGTCCGTTCGCCAAACCCTTGGACGCGTGGTTGTACCG TTGCGGGACATGGGTAATCTTTCTCAGCATGTACCTCGCGCTATTGCTGA AGATGGACGCCACAGATGAGGACAGCAACAGCCAGGATGTGTTCGCTGGG TTTCTGATTGCTGCACACGTGGGCATGGTCTTGTTCGTGATCGCCAACGC AATTTTGTCTGCTTTGAAAGGACTTCGTGAAGTCCGGGCTGAAGAGATGC CCGTGGTGATTCAGGGACCTAAACGTCATGGATCTACGTCGACGAGAGAT AACGATATTGAAATTCTCGAGGAGGATAAAGACGACGCCGCCAGTGAATA TAACTCAAATCCTATGTTTCCAGGACGCCGACAGAACCACTAGTGATATT GTGCGGCTCGGTCATGGCGTTTGATGAACTTATGATGCTTCGAGGGTGTA TAAGACTCGGCGGTTGTTGATAAAATCGAAATATTTCATTTAAGCGGCTG CTAGAAGTAGTAGTCTCTTACGCTCCGAATAGGGGCAGTAACTAGTCTGT TATCAGCTTTAAGTGCGTAAACCATCGAAATTAATCTACTAGGTGCAGTT CAATAAAAACATGCTATACTTCTCTGTAGCCTCAACTAGTACTATATAAT TACTCTACATGTGGGAGTATTTGCTTGAAATAGGACCATGGGGTCTCTCT CCTTGGTTGCCGCCTTTTTCTGCTGTTTGATTTCCTGCCAATCTTTCTTC TCTGAAGTTCAGGATTTTCTGAAATCATACCGGTTTTTATGGGGACAAAA TCTTGTACAAAAATCTTGATCTCGCCCAAGATTTTCCCAACAAGATTTTA TTCTACTTTTTATGGGTAAAAATGCTCGCACAAAAAGCTTCCGAGA
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1218:26822..28717+

>mRNA_A-nodosum_M_contig1218.2.1 ID=mRNA_A-nodosum_M_contig1218.2.1|Name=mRNA_A-nodosum_M_contig1218.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=909bp|location=Sequence derived from alignment at A-nodosum_M_contig1218:26822..28717+ (Ascophyllum nodosum dioecious)
ATGTTACGGAATGGTCACTCGATCCATGCGAAGCGGGTGGCAAGGAACAA
GCACCTCGCCATGGGGCTTTTTCTACTCTTCGCCGTGTACTCTTCAGTGT
CCTACACGATTTTTCAGACCTTTGTCTGTGACCTCTTGGACTCCGGGGTT
CGCTATCTGCGCTCTGACTACGATTTAATATGCGGGACCAAAACCCACGT
CGCATATATGACGTACGCAGGGTTTATGATTATCGTGTACCCTGTCGGAA
TCCCGGTAGTGTTTGCTTGGGCGCTCTTTAGAAATCGGGATGCCATCAAG
AGTAGTCTAGTAGGTACCACTGATAGAAGCCGGGTTCCGCCAGAGCTAGG
GGCTATCAAAGACCTCTGGGCACCGTACAAGCCGAGCCGTTACTACTACG
AGGTTATCGAGTGCGGTCGGCGGATTGCACTGACAGGTCTCGCCGTCTTC
ATCTACCCCGGCAGCACGGCGCAGGTGGCAATCGAAGCACTTTTAGCTGT
CGTCTTCTCCTCTGTTTCCGAGATTGTCAGTCCGTTCGCCAAACCCTTGG
ACGCGTGGTTGTACCGTTGCGGGACATGGGTAATCTTTCTCAGCATGTAC
CTCGCGCTATTGCTGAAGATGGACGCCACAGATGAGGACAGCAACAGCCA
GGATGTGTTCGCTGGGTTTCTGATTGCTGCACACGTGGGCATGGTCTTGT
TCGTGATCGCCAACGCAATTTTGTCTGCTTTGAAAGGACTTCGTGAAGTC
CGGGCTGAAGAGATGCCCGTGGTGATTCAGGGACCTAAACGTCATGGATC
TACGTCGACGAGAGATAACGATATTGAAATTCTCGAGGAGGATAAAGACG
ACGCCGCCAGTGAATATAACTCAAATCCTATGTTTCCAGGACGCCGACAG
AACCACTAG
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