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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 0 |
| Start | 1 |
| Model size | 1890 |
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Cds size | 1707 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680866638.651469-CDS-A-nodosum_M_contig121:779378..779879 | 1680866638.651469-CDS-A-nodosum_M_contig121:779378..779879 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig121 779379..779879 - |
| 1680866638.6605718-CDS-A-nodosum_M_contig121:780251..781221 | 1680866638.6605718-CDS-A-nodosum_M_contig121:780251..781221 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig121 780252..781221 - |
| 1680866638.6719685-CDS-A-nodosum_M_contig121:783365..783448 | 1680866638.6719685-CDS-A-nodosum_M_contig121:783365..783448 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig121 783366..783448 - |
| 1680866638.6851993-CDS-A-nodosum_M_contig121:785342..785447 | 1680866638.6851993-CDS-A-nodosum_M_contig121:785342..785447 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig121 785343..785447 - |
| 1680866638.6988163-CDS-A-nodosum_M_contig121:785968..786016 | 1680866638.6988163-CDS-A-nodosum_M_contig121:785968..786016 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig121 785969..786016 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680866638.7107615-UTR-A-nodosum_M_contig121:786016..786198 | 1680866638.7107615-UTR-A-nodosum_M_contig121:786016..786198 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig121 786017..786198 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig121.64.1 >prot_A-nodosum_M_contig121.64.1 ID=prot_A-nodosum_M_contig121.64.1|Name=mRNA_A-nodosum_M_contig121.64.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=569bp
MEIVDENSPRAAGLSSASGKAKPRVSSGFPLAERSRDGQGIIGPAPPLRQ KGSSGGIDGDREREREREGHRRKSKSSRRLTADSAALADVLTNLDIDQDD GEAPVPSFSKKSKNHGQESRRLTADPLSINCLLNDSDSSTGIGIDGSPGG EGRDAALASSSMPMDLGSDDDNDDTGIDAERGSDASNRTDGVDVGSEGAI GDRSMDPSLDRFRSFFSDSSMNRSLEDRAASASADKTEDFSSLFGFTEME SPPPIIGEMGGDDRHVAGVRPRARHHSNQKPALEDIAPVPAAPPLLPSRP PGASARISGGGMRDSAGSKTRGPVSVKPQSPARRPRRSVASLDLSSREPS CRDPQEGGSLEGVPLSAAETAVGYGSRSGAGLDNQERVRGGAVEPTAMGK ARGAAAKGEEDAMAEPSKHKSSRLSSRSLTADSFSVQNLLGSPLADAEDD DLEGVEQNAGGRRAARNTKNDPPPLDFNMEVGVFVGEGEQGTAGDDHGGQ TADLNALYEMMNDTASDPDTVLTADQRVTHSSQAGGHRSPPRGSRFESVS FESAYGNLLPSSAGPSIRE back to topmRNA from alignment at A-nodosum_M_contig121:779379..786198- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig121.64.1 ID=mRNA_A-nodosum_M_contig121.64.1|Name=mRNA_A-nodosum_M_contig121.64.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6820bp|location=Sequence derived from alignment at A-nodosum_M_contig121:779379..786198- (Ascophyllum nodosum dioecious) TGTGCTCGTAGATCCCCTCAAGTCCGGTTAGGAAGTCGCGGCGTTCGAAG
GGACGGAATGGGAGGCATGGCACTACCTTGAAAAGGTGACCTAGATCTGT
TCGACCTCGGTGCCTTGGGTTGGCCACGCCTGCCAGGCGCAAGCATCGTT
GTCGTGAGAGCCTGTGGCGCGTGGAGGGAGATATGGAAATCGTTGACGAA
AACTCGCCCCGTGCAGCGGGCTTGTCGTCGGTGAGTCCACGAATTTCATG
TCTGTTTAAAGAAAAATCTGAATGCACCTAGACCTTCTGTTGTGGCAACA
TGATCGGAGGCGATCTGGCGTTGGATCTCATGTTAGAGCACTGCCCGATC
ACTGCTCTTAAGCTTAGTTACAAATTATATTTGATTAAAGCAACCTTTAA
TACAGACAGTTTAGTAGATCTACTGCTGTCGTTTGGCCCTTCACGTAAGC
CAAGATACATTCGCAAGGCATTTGCTCAACTTGCGATCGCAGACTGCCTC
TACCGCTCCATTCCCTGGAGACTGCCAGCATCCTCATGGAAGATGGCTCA
AATGTGTTTCTTTGAACGGCTGGGATACTCTACTTTCGCTCACGTTTGTG
CGGCCGCTTTCGAGTGCACTCTTGAATAAGGGCAGGTGTACTACAGTTGT
AAGAGTAGAAATCTGTCCTGACTTGAAGGTACGTAGATGTACAATCCGAC
CTCGGTCAGCAGAGTGAGGGGCGAACATGTCTCGATCCGTTGTCCGAACA
GGCAAGCGGAAAAGCCAAGCCCCGCGTGTCTAGTGGCTTCCCGTTGGCGG
AGCGATCGCGTGACGGCCAGGGAATTATTGGGCCTGCTCCGCCGTTGCGG
CAGAAGGTGAGTTGACCCTCTGTTTGAAATCTGTCTGTACCGCACTCTAA
TTACCAGGTAAAAAAACTTGTAGAAATGTTGAGTAGGTTTCGAGTGTTGT
TGCCTAAAGTTTCAAGATACCGTCCGCCGGTACTTTCAACATGCCCACTT
CATGCCAATAGTGGGTGTGGGAAAGAGAGGCGAATATCAACTGGTCCATG
GTGATCTGCCAAGGCAGCACCCGTTCGGAACTACCTTGAGGTTTACTGGC
CCTGTGCCGGCGGACTCTCGGCAGTGAACGCCATCGGTACGCAATCGCGT
GACCCGATAAACTCGGGACTGACCCGATGGCGTATGGCGGTTTCATAAAT
GGACCCCGCCGCGGAACTCGGGAGGAATCCCGTAAGTAAGCACCAGATTC
AGCCTGAGTATGGAGATGAGCAGGCTGACGCGGGACGAGACGGCTGAACC
CATCTCGCGAGACCAAATTCTCAGGCACGCACGGGGACAGGGGAATATCC
ATTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCAACCTTACCCGGTT
GATCCATACTCTGCTATATGTGATGACCATACATACATACATACATACTG
TACTATATAGAGACTACAAGTACTTTCAATACTCTGGCGGTTTTTTCGAC
TCTAAAATGTGTATGTTGTCACCCCATTTATTCTGGACGTCAGACTTGTG
GACGCACCATCCGGGGTCACACAGGAGGAAGGTCACACAGGATTTCTTCA
CCTTCCTATCGCGAGAAGGATTGAATCGTCCCTTGCCCTTGTCGACCGTG
AAGTTGAATTTTGTGTACCCAAGAATTAATCGTTCTCCACTTGTTGGGCA
TGAAAAATTCCAGTTCGTGTGACTGCACCGAGATTCGAACTCACATCCCC
ACGTCATAAGGTTTCGAGGTTACCAACTGAACCACCGGGGCGACCGGCTC
AAGTTTGAAATTTATAGTACATACAGAGTCTCCACAGATTCAAATCCTGA
ATCTAATGAAAAATCCGATTTCTCCCAACAACCTCGATCTTTCCCGTTGA
TCTTTCCCGTTTTGCTGAGTTATGGTGACTATACTCTATTACATATATTT
GGAGATGTCTCTTTTTCCGAGTTTATCTTTGTACCATTTTCGTTTTCGCT
TTGTATGAAGAGTACGTCGTACGTTCTCTTCTTCCGGATGATGTTTTTCT
ACCTAGCGACCACGGGCTGGATTTTTGACATCAGCTTATGTGAGAATTCA
ACCAATCAATCAAATCAGTATGGTCACACATATAGCCAGAGTATCGATCA
ACCGGGTAAGGTTGCCAATCCTGCAGCAGATAATGAATCAACCGGGTAAG
GTTGCCAATCCTGCTTCGTGATCAGCTGAACAGGGAAAATGAATATTTCC
CCCTCCCCGTTCACGACTGAGAATTTGATCTCGCGAGACGGGTTCGGCCG
TCCCGTCCCGCGTCAGCCTCGTCATTCTCCATACTCAGGCTGAATCTGGT
GCTGACTTACGGGATTCCCCCCGATTTCCGCGGCGGCGTCCATTTGTTTA
TTTAAACCGCCATACGCCATCGGGTCAGTCCCGAGTTTATCGGGTCACGC
AATTCCGTACCGATGGTGTTCACTGCCGAGATTCCGCCGGCATAGGGCTA
GCAGTCCTCAAGGTAGTTCCAGTAACGGGTGCTGCCTTTTCAGGTATCAC
CATAGACTAATTCATGTGCGCCTCTCTTTTCCCATGCCCACTATTGGTAT
GAAGTGGTTATAGCATGTACCTGTTATCAATACCTACTGCACCACAGACG
AGACACGAAATGAGTCAAAACACATCAGCCAATAAGTTACGACGGACACG
CCTTCCCAACCGTTACAAATGTGTCTCAATGACCTCGATCGTGTTCGCAG
GGCTCGTCGGGAGGGATCGATGGGGATAGGGAGAGAGAGAGAGAGAGAGA
AGGACACCGTCGGAAGAGCAAGAGCTCGCGAAGGTGTGCTACACGAGAAT
CAACTCCATGGGTAGTCTATAGCTCTAAATATTGATATAACTCGTATTAA
TTGTATGTATGGTTATTACATGTAAGCAAGAGTTAAGGATCAATCAGCCA
ATCCTGCTCGTGGTCAGCTGAACAGGGAAAATGAACTCATATAGTATTGT
CTACAGTAATTTTTTAAAGAAAAATCTTTTTAAAGAAAAATCAGAATGCA
CCTAGACCTTCTGAGCATCCCCCAGTCAGGGGGAAAAAATGTCAAAACGT
TTAGGTGGGATCAATAGCTGAAAATACAAAACCTCTTCATGGCATTTAAA
CGGGTTCCCCGATGGTAATAACATTGGGTCAACAGTATAATGTCGGGGAG
AAACCCACCGTCATACTGTACACTTACATTAATCGCCATGCAGGGACACC
AACAAAAGGGAAGACAAACTAATACATCATCAAACAATAAAGACAAATCC
GATACAATGATTGAAACGAGCACAGCAGAGGACCATGATGATGAGAATCT
TCATAATCCAAGTACACGACCCCGTCATTCACCTGGAAGTAGACGAAGAG
CAGTAGGCGATCACACAAGGCGGTAAGAGGCAAGCGGGAAGAACTGGGTT
CCTCGCTCCATACTTGTCAGGGCTACGACACACAGATGCTCCTCATGCAT
GGACTTAGCTATGGTCCCGCGTTGACCAGAAACACAAAGGAAAGAGCATC
TGTCTGTCAAAGTGACCAAGTAGGCCTCAGGCCACTTCGTGTAACCTCCC
ATACGATCCTGACCCGAACTATCTTCAGCTGCATGTCTTTTATTCCGAAC
TGTCGTGCCGGATTCATCAGTTCCTTGAATCTTCTCGCAGAACGTACACC
AGCTCCATAATCGTTTCTCCAATCTTCTTGCAGAGCGGGACTGTATGATT
GTACTTTGGTTTCAGTAAAAATGATCTAATTAGCTAGTCAGGAAAAACTG
TTGTCTCAGCCACTTGACCATATTTTTTCAGGATCTAGATAGGGTTTTTA
AAATACAGGATAATAAAGAAGAACACATAACCACTATTGTCTACAGTAAT
TATATTATGTCTCGATCCGTTGATACAGTACCATTTGTGTTTGTTGTCGA
TTTCTGCCGATTGAGCTCTTTAGCAACTTGATCGGTTACCAATACCATCC
ACAGTATCACTACAACAGTATTGTCATAGACTATGATGCCTGTGGAAATA
AAATACTCTCTACGGACTCCCACTCTGTCCTGAATTCCGAGTCAGGAGGG
AGGTATTCAGTAGAGGACATACATTGCGGCCAACTTCCCGCTTTGTCAAA
ATACCGCCAAAAACTGCGTACTTGTTTAATATTACAATCCTAGAGGGGCT
AGAGGCTCAAAACTGCGACATGCCCGGGGATGGCCTCCGATACATCCCCG
GGGTCAAATTTTTGCAACGTTTTCTCGTGAGAGTGGTCAACGTTCAACGC
AAGCGAACGTAGTTAGGGGTTCCATATAGTTATCAGGCGGGACGTGCACA
TGGCGTTGAGATTCGATGAAAGGCCTCGGTGGTAAAGGTATTCGTTAGAG
AGTGGGAAGGTCGGGGTAACAGGGAGAACCCACAAAACTACTCGAAACAA
TTTCTTAGACGTATAACCCCAAAATAAGCGACATACTGAGCCGATTCGGG
TGCCGCACTTTTTCTAGTCATCTATTTGACCGGAGCTTTAGTTCAGGTGG
TCAAAGACGACGTACCTTGATTTGCCCCGGGTGCTACGTCGAGCTACATT
TAGGCACTTCAGACTTGAGGCGGATATACTAGTAGTACTATACTAATATA
AGGTACTACTAAGTATTATAATACTATTATTCAAGCCGCCGATCCTACTG
ACTCGTTCTCAGTGGCCAATTTTCAGGCAAAAGGACGGCTTCGCGCGTCC
GTACAGACGGACTTGTGCGGACCTATCTCGCTGGTCCCGTACCCTTAAGT
CATCATGCATGCGCATCGATGCACTTTTGACGTTTCGGAAATCGTACGAG
CACCCGAGGAGTTCCGGCCCCAGCGTTATTATCAGAGCGTGAGTGTGAAA
CGTGTACTCGCGCGCATTTGTGTCGATCGACGCCGCCTTGATTCACCCCT
CCCTTCATTCCTTCCCTCCGACCGCAGGTTGACCGCCGACAGCGCCGCCC
TCGCCGACGTGCTGACGAACCTGGATATAGATCAAGACGACGGCGAGGCA
CCGGTGCCCTCCTTCTCCAAGAAATCCAAGAACCACGGGCAAGAAAGCCG
TCGCCTGACGGCGGATCCCTTGTCGATCAACTGCCTCCTCAACGATAGCG
ACAGCAGCACCGGCATCGGCATTGACGGCAGCCCCGGAGGGGAAGGGAGG
GATGCTGCCTTGGCTTCCAGTTCGATGCCGATGGATTTGGGTTCCGACGA
CGACAACGACGACACCGGTATCGACGCGGAGCGCGGTAGTGACGCCTCAA
ATCGAACCGACGGGGTGGATGTGGGGAGCGAGGGCGCGATCGGGGACCGT
TCTATGGACCCATCTTTGGATCGCTTCCGGAGTTTTTTCTCGGATTCTTC
CATGAACCGTTCCTTGGAGGATAGGGCCGCGAGCGCAAGCGCCGACAAAA
CGGAGGACTTTTCCTCGCTCTTCGGATTTACGGAGATGGAAAGCCCACCT
CCTATCATCGGGGAGATGGGGGGCGATGATCGCCACGTTGCTGGTGTCCG
TCCTAGGGCTCGCCACCACAGCAACCAGAAGCCCGCCCTGGAAGACATCG
CCCCCGTTCCAGCCGCGCCGCCTCTGCTGCCGTCGCGGCCCCCTGGGGCC
TCGGCTAGAATCAGCGGTGGCGGCATGAGAGACAGTGCAGGTAGTAAAAC
GCGGGGTCCGGTCAGCGTTAAGCCACAGTCGCCCGCCAGGCGGCCTCGGA
GATCTGTGGCAAGCCTCGACCTTTCCTCCCGAGAGCCCTCTTGTCGTGAT
CCTCAAGAGGGCGGGTCGCTTGAGGGTGTTCCGTTGTCAGCTGCTGAAAC
CGCGGTCGGTTATGGCTCTCGATCGGGAGCTGGCCTTGACAACCAGGAGA
GGGTCCGCGGCGGAGCTGTTGAACCGACGGCCATGGGAAAGGCAAGGGTG
AGGAATGGGAAGTTTACTAGTAGGGTTTTGACAAGGCAGACCCGCCGACT
TGCCCGGCAAAAATATTATCACCGCGCGACGAATATATCGCGTCTACGGG
CGTGTGATGAGCCAGAACCGAGCGTTTGCCTCTTACTATCGCGCTGTGCC
GTGATAGGGTTGCTTCCGCAGGCATGCTTCCGAAAGTCGCTACGCCAGCC
TATACGAGTAGCTCTGCAAACAATCCTTGGAGCGCGTGTGTACTCAACCG
CCAATGTCGAATCTAATGCTTGCGCACAATCGATCTGTTGCAGCATACTC
GCTCTCTTTATTTTTACTGTTTTTGGTGTGCCTGTTATTGTGTTTTTATG
TTCTTGTGCATGCAAACAGGGGGCAGCCGCGAAAGGTGAAGAGGATGCCA
TGGCAGAGCCCTCGAAGCACAAGAGTTCTAGGCTTTCCTCGCGCAGTCTG
ACCGCTGACTCATTTTCCGTGCAGAACCTCTTGGGCAGTCCCCTAGCAGA
CGCGGAGGACGACGACCTGGAAGGTGTCGAACAGAACGCCGGCGGACGTC
GAGCCGCGCGGAATACGAAGAACGACCCGCCGCCGTTGGATTTCAATATG
GAGGTTGGCGTTTTCGTTGGTGAGGGCGAGCAAGGCACCGCCGGGGACGA
TCACGGCGGGCAGACGGCGGACCTCAACGCCCTCTACGAGATGATGAATG
ACACCGCAAGCGATCCCGATACGGTGTTGACCGCAGACCAACGTGTAACG
CACTCCTCGCAGGCTGGAGGACACCGATCCCCCCCGCGAGGGTCAAGATT
TGAGAGCGTGTCCTTTGAGAGCGCGTACGGTAATTTGCTGCCTTCGTCGG
CGGGTCCATCGATTCGTGAG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig121:779379..786198- >mRNA_A-nodosum_M_contig121.64.1 ID=mRNA_A-nodosum_M_contig121.64.1|Name=mRNA_A-nodosum_M_contig121.64.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1707bp|location=Sequence derived from alignment at A-nodosum_M_contig121:779379..786198- (Ascophyllum nodosum dioecious) ATGGAAATCGTTGACGAAAACTCGCCCCGTGCAGCGGGCTTGTCGTCGGC AAGCGGAAAAGCCAAGCCCCGCGTGTCTAGTGGCTTCCCGTTGGCGGAGC GATCGCGTGACGGCCAGGGAATTATTGGGCCTGCTCCGCCGTTGCGGCAG AAGGGCTCGTCGGGAGGGATCGATGGGGATAGGGAGAGAGAGAGAGAGAG AGAAGGACACCGTCGGAAGAGCAAGAGCTCGCGAAGGTTGACCGCCGACA GCGCCGCCCTCGCCGACGTGCTGACGAACCTGGATATAGATCAAGACGAC GGCGAGGCACCGGTGCCCTCCTTCTCCAAGAAATCCAAGAACCACGGGCA AGAAAGCCGTCGCCTGACGGCGGATCCCTTGTCGATCAACTGCCTCCTCA ACGATAGCGACAGCAGCACCGGCATCGGCATTGACGGCAGCCCCGGAGGG GAAGGGAGGGATGCTGCCTTGGCTTCCAGTTCGATGCCGATGGATTTGGG TTCCGACGACGACAACGACGACACCGGTATCGACGCGGAGCGCGGTAGTG ACGCCTCAAATCGAACCGACGGGGTGGATGTGGGGAGCGAGGGCGCGATC GGGGACCGTTCTATGGACCCATCTTTGGATCGCTTCCGGAGTTTTTTCTC GGATTCTTCCATGAACCGTTCCTTGGAGGATAGGGCCGCGAGCGCAAGCG CCGACAAAACGGAGGACTTTTCCTCGCTCTTCGGATTTACGGAGATGGAA AGCCCACCTCCTATCATCGGGGAGATGGGGGGCGATGATCGCCACGTTGC TGGTGTCCGTCCTAGGGCTCGCCACCACAGCAACCAGAAGCCCGCCCTGG AAGACATCGCCCCCGTTCCAGCCGCGCCGCCTCTGCTGCCGTCGCGGCCC CCTGGGGCCTCGGCTAGAATCAGCGGTGGCGGCATGAGAGACAGTGCAGG TAGTAAAACGCGGGGTCCGGTCAGCGTTAAGCCACAGTCGCCCGCCAGGC GGCCTCGGAGATCTGTGGCAAGCCTCGACCTTTCCTCCCGAGAGCCCTCT TGTCGTGATCCTCAAGAGGGCGGGTCGCTTGAGGGTGTTCCGTTGTCAGC TGCTGAAACCGCGGTCGGTTATGGCTCTCGATCGGGAGCTGGCCTTGACA ACCAGGAGAGGGTCCGCGGCGGAGCTGTTGAACCGACGGCCATGGGAAAG GCAAGGGGGGCAGCCGCGAAAGGTGAAGAGGATGCCATGGCAGAGCCCTC GAAGCACAAGAGTTCTAGGCTTTCCTCGCGCAGTCTGACCGCTGACTCAT TTTCCGTGCAGAACCTCTTGGGCAGTCCCCTAGCAGACGCGGAGGACGAC GACCTGGAAGGTGTCGAACAGAACGCCGGCGGACGTCGAGCCGCGCGGAA TACGAAGAACGACCCGCCGCCGTTGGATTTCAATATGGAGGTTGGCGTTT TCGTTGGTGAGGGCGAGCAAGGCACCGCCGGGGACGATCACGGCGGGCAG ACGGCGGACCTCAACGCCCTCTACGAGATGATGAATGACACCGCAAGCGA TCCCGATACGGTGTTGACCGCAGACCAACGTGTAACGCACTCCTCGCAGG CTGGAGGACACCGATCCCCCCCGCGAGGGTCAAGATTTGAGAGCGTGTCC TTTGAGAGCGCGTACGGTAATTTGCTGCCTTCGTCGGCGGGTCCATCGAT TCGTGAG back to top
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