mRNA_A-nodosum_M_contig1209.7.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1209.7.2 vs. uniprot
Match: A0A6H5L0C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C2_9PHAE) HSP 1 Score: 475 bits (1222), Expect = 1.520e-138 Identity = 302/600 (50.33%), Postives = 389/600 (64.83%), Query Frame = 2
Query: 1628 NANLEGGIDIALPRLLVEGGFLWKFPFHSLGSPRRRWFQIKPTEGLRFTSRGR-VVRPAATQKS-VGCSANGAFR-DLSKEEECNNNASLVSIPIVNIRAAWPLTLLWADPQRDLQKFPPREMGIDKIIDIVWGHKTPAFWQQASHRGVHTLPTPALCFSIIGDGRTLDLASEILAEARQWIRALSCVARRVAAPTESTITSQGRGPAKYMVTDPERFE------LTGT--KETYFSRSL--------------RPDVTAKTSLVDELLSQQQPSIRV---FDSHREKPVDVSRSWSYHTISAWRRQLFPAVSRGEAASVIALFEQGCPVDLVQTRTGETVLLLACRLGDVALARECLRRGSRNGILSKFGQTALHAAVAAGKESCVRLLLETAASSHSDSVVSNHRDLNNETPLHVASRCGFRGIADLLLHHGADLRLVDWXXXXXXXXXXXXXXXXXXXXXXXXXXXTIMEDKNKRGNRALXXXXXXXXLSCVQLLLGTAAEPDIPNEXXXXXXXXXXXXXXXXVTKLIRQYSPVVGTTSGGS--WHVRKRGLASGTSGESVDILPRPYTSGSSLTRRPISPEHHPSRDLRQRYSSAA 3337
+ N G+D++LPRLLVEGGFLWKFP+H+ G+P+RRWFQ+KP EGL T+ G VVRP G GA R + S + + S+P+ +RAAWPLT +W DP+RDL++ PPRE+ +++I+D+ GHKTPAFWQQASHRG+HTLP P LCFS++G R+LDLA+E L EAR+W+ AL+ VA + A ++ + G A + P RF L G +E+ + L R A T+L E+ S+ + S+R S + K + +WS TI AWRR+LFPAV RG+ A+V+A+F+QGCPVD+ QT TG+T +L+ACRLGDV + RECLRRGSRN FGQTALHAAVA+G+E+C RL+LETAA S SD+VVSNH+D N ETPLHVA R G+ GI + LLHHGADLR VD XXXXXXXXXXXXXXXXXXXXXX ++E+ N RG+RAL ++CV+LLLGTAAEPD+PN VT+LIR+Y+P GT SGG + +R G S S D LPRP++SGS+ P +P+H SRDL R SAA
Sbjct: 64 SGNTANGLDLSLPRLLVEGGFLWKFPYHNAGTPKRRWFQVKPAEGLLTTASGHLVVRPTVGGGGGSGVCERGADRGNESSRAGGGDKIAAPSMPMRRLRAAWPLTFIWVDPERDLKRSPPREILVEEIMDLARGHKTPAFWQQASHRGIHTLPDPKLCFSLVGHDRSLDLAAESLPEAREWVCALARVA--LMAKRGGSVKTAGDAVAPLL---PHRFRPEPAASLAGPDLEESVSAERLNDIDHKVDSHVGVQRQSDRAATALNTEV-SRHELSLRSDADLSSEKPKVLGEGGTWSVDTIHAWRRRLFPAVKRGDIAAVLAIFDQGCPVDIAQTGTGDTPMLVACRLGDVGMVRECLRRGSRNDPHPAFGQTALHAAVASGQEACARLILETAAPSRSDAVVSNHKDPNKETPLHVACRRGYDGIVEALLHHGADLRAVDRKGNXXXXXXXXXXXXXXXXXXXXXXGDVVLEESNARGDRALHTAAAPGHIACVELLLGTAAEPDVPNADGQTPFALASRGGHLAVTRLIRKYAPAAGTPSGGDAQFQAHRRANEGGRSVTS-DTLPRPHSSGSA-PNPPGTPDHR-SRDLEHRCYSAA 654
BLAST of mRNA_A-nodosum_M_contig1209.7.2 vs. uniprot
Match: D8LE78_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE78_ECTSI) HSP 1 Score: 430 bits (1106), Expect = 1.710e-126 Identity = 305/669 (45.59%), Postives = 393/669 (58.74%), Query Frame = 2
Query: 1745 IKPTEGLRFTSRGR-VVRPAATQKSVGCSANGAFRDLSKEEECN-----NNASLVSIPIVNIRAAWPLTLLWADPQRDLQKFPPREMGIDKIIDIVWGHKTPAFWQQASHRGVHTLPTPALCFSIIGDGRTLDLASEILAEARQWIRALSCVARRVAAPTESTITSQGRGPAKYMVTDPERF---------------ELTGTKETYFSRSL-------RPDVTAKTSLVDELLSQQQPSIRV---FDSHREKPVDVSRSWSYHTISAWRRQLFPAVSRGEAASVIALFEQGCPVDLVQTRTGETVLLLACRLGDVALARECLRRGSRNGILSKFGQTALHAAVAAGKESCVRLLLETAASSHSDSVVSNHRDLNNETPLHVASRCGFRGIADLLLHHGADLRLVDWXXXXXXXXXXXXXXXXXXXXXXXXXXXTIMEDKNKRGNRALXXXXXXXXLSCVQLLLGTAAEPDIPNEXXXXXXXXXXXXXXXXVTKLIRQYSPVVGTTSGGSWHVRKRGLAS-GTSGESVDILPRPYTSGSSLTRRPISPEHHPSRDLRQRYSSAARSSLRQAEPVEVLSS--EIVFSKTA--------------------------HKKK--------EERV----TSSRPPV---YGSLFDGLHVYVAGNRQPLGSQSGC 3526
+KP EGL T+ GR VVRP A G + R+ + E + + + SIP++ + AAWPLT +W DP+RDL++FPPRE+ +++I+D+ GHKTPAFWQQASHRG+HTLP P LCFS++G R+LDLA+E L EAR+W+ AL+ VA + A + + G A + P RF ++G + + R A T+L E+ S+ + S+R S K +WS TI AWRR+LFPAV RG+ A+V+A+F+QGCPVD+ QT TG+T +LLACRLGDV + RECLRRGSRN FGQTAL AAVA+G+E+C RL+LETAA S SD+VVSNH+D N ETPLHVA R G+ GI + LLHHGADLR VD XXXXXXXXXXXXXXXXXXXXXXXX ++E++N RG+RAL ++CV+LLLGTAAEPD+PN VT+LIR+Y+P GT SGG + A+ G + D LPRP++SGS+ P H SRDL R SAA +Q E + +S + V++ A H K EE V +S+ PV +GSLFDGL VYV G RQPLGSQ C
Sbjct: 1 MKPAEGLLTTASGRLVVRPTA---GGGGGSGVCGREADRGNESSRAGGGDKGAAPSIPMMRLHAAWPLTFIWVDPERDLKRFPPREIVVEEIVDLARGHKTPAFWQQASHRGIHTLPDPKLCFSLVGHDRSLDLAAESLPEAREWVCALARVA--LMAKRGGLVEAAGDAVAPLL---PHRFWPEPAASPAGPDLEENMSGERLIDVDHEVDSRVGGQRQSDRAATALNTEV-SRHEVSLRSDADLSSEIPKVFGEGGAWSVDTIHAWRRRLFPAVRRGDIAAVLAIFDQGCPVDIAQTGTGDTPMLLACRLGDVGMVRECLRRGSRNDPHPAFGQTALQAAVASGQEACARLILETAAPSRSDAVVSNHKDPNKETPLHVACRRGYDGIVEALLHHGADLRAVDRKGNXXXXXXXXXXXXXXXXXXXXXXXXVVLEERNARGDRALHTAAAPGHIACVELLLGTAAEPDVPNADGQTPFALASRGGHLAVTRLIRKYAPAAGTPSGGDAQFQAHRRANEGGGSATADALPRPHSSGSASNPTP----DHRSRDLEHRCYSAAGLGHQQFEDLNDPTSCRQPVYTSGADSSDRDLLRSTSEQDRRGLYARGGELHNTKATPPQSTVEEDVISPASSASAPVQGRHGSLFDGLQVYVVGGRQPLGSQHSC 656
BLAST of mRNA_A-nodosum_M_contig1209.7.2 vs. uniprot
Match: A0A836CAX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAX5_9STRA) HSP 1 Score: 214 bits (544), Expect = 6.130e-52 Identity = 188/611 (30.77%), Postives = 248/611 (40.59%), Query Frame = 2
Query: 1265 AEVARLTRENSTLKQLLGLSRLSPNCLLEGDIWRTSPGGAISRAPPSDSRRRQVFTLRNRRRRCWSLTLDDDNPPVKIQKEGRTTLASPSHSVLEVGWELKR-RPRSVSMGYSPPHKREAMWNANLEGG-------------IDIALPRLLVEGGFLWKFPFHSLGSPRRRWFQIKPTEGLRFTSRGRVVRPAATQKSVG--CSANGAFRDL-------SKEEECNNNASLVSIPIVNIRAAWPLTLLWADPQRDLQKFPPREMGIDKIIDIVWGHKTPAFWQQ-ASHRGVHTLPTPALCFSIIGDGRTLDLASEILAEARQWIRALSCVARRVAAPTESTITSQGRGPAKYMVTDPERFELTGTKETYFSRSLRPDVTAKTSLVDELLSQQQPSIRVFDSHREKPVDVSRSWSYHTISAWRRQLFPAVSRGEAASVIALFEQGCPVDLVQTRTGETVLLLACRLGDVA----------------------------------------------------------LARECLRRGSRNGILSKFGQTALHAAVAAGKESCVRLLLETAASSHSDSVVSNHRDLNNETPLHVASRCGFRGIADLLLHHGAD 2851
AE+ +L REN L+ S LSP R++ +++ + RR S+ D + +T A E+ E++R R +S G S NA+ G I +LPRLL EGGFLWK P+H G+P+RRWFQ+ P +GL RGR V P + C A L S++ + A+ R A PLTL+W DP + +++ PPRE+ + + + GHKT AFWQ A G LP ALC S+I RTLD+A+ A+AR W A + V RR A G ELT PD WR++LF AV G+A +V A F+ GC VDL + + +T LL ACRLG+V +AR L RG++N +FGQTAL AAVA G C RL+LETAA S +D+VV+NH D N ETPLHVA+R G A LLL HGAD
Sbjct: 235 AELRKLQRENEVLR-----SELSPA--------RSASAASVTGRGKGGRKXXXXXXXXXXRRASESMGGLDAATVAGALRSAHSTDAKARAREAELLQEIERLRGLQLSSGRSAAXXXXXXXNASTPRGPLAAARRPSEEIAIAASLPRLLYEGGFLWKMPYHKSGTPKRRWFQLMPADGLVLNRRGRAVLPGMNAEGAPPLCRAQHPLPQLIPYGAQPSRKTQAAAGAAA--------RIALPLTLVWFDPDKSVRRAPPRELLLGDVRSVTAGHKTAAFWQHIALGAGTAGLPPAALCLSLIAADRTLDVAAATPADARAWRDAFADVVRRHRAGELG-----GXXXXXXXXXXXXXAELT------------PD------------------------------------------QWRQRLFLAVHAGDATAVSAAFDAGCAVDLAEAGSMDTALLSACRLGNVEERRRASILSVAAHLTSTCARRAPRHAPVRTHPNRAAPXXXXXXXXXXXXXXXTLLPRQVARVALARGAKNDPHPQFGQTALQAAVANGHLDCARLILETAAPSAADAVVANHEDPNRETPLHVAARRGDAAAAALLLRHGAD 765
BLAST of mRNA_A-nodosum_M_contig1209.7.2 vs. uniprot
Match: A0A7S4V705_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V705_9STRA) HSP 1 Score: 162 bits (410), Expect = 3.320e-36 Identity = 132/474 (27.85%), Postives = 199/474 (41.98%), Query Frame = 2
Query: 1484 PPVKIQKEGRTT-LASPSHSVLEVGWELKRRPRSVSMGYSPPHKREAMWNANLEGGID--IALPRLLVEGGFLWKFPFHSLGSPRRRWFQIKPTEGLRFTSRGRVVRPAATQKSVGCSANGAFRDLSKEEECNNNASLVSIPIVNIRAAWPLTLLWADPQRDLQKFPP----------REMGIDKIIDIVWGHKTPAFWQQASHRGVHTLPTPALCFSIIGDGRTLDLASEILAEARQWIRALSCVARRVAAPTESTITSQGRGPAKYMVTDPERFELTGTKETYFSRSLRPDVTAKTSLVDELLSQQQPSIRVFDSHREKPVDVSRSWSYHTISAWRRQLFPAVSRGEAASVIALFEQGCPVDLVQTRTGETVLLLACRLGDVALARECLRRGSRNGILSKFGQTALHAAVAAGKESCVRLLLETAASSHSDSVVSNHRDLNNETPLHVASRCGFRGIADLLLHHGADLRLVD 2866
PP KI + + L+S S ++L G + P VS Y + N + I +P +L +G LWK PFH++GS +R+ ++R K+ C + + + C+N + A PLTL W D R + + + I GH T AF + GV ++ CFS++G RT D +E + AL + R++ S I +Q + E Y S +A S + H + + W+ ++ LF AV G+ + GCPVD ++ T +T LL ACR G + L RG++N FGQTAL AV+AG +CV+++LETAA S SD+++ NH D N E P+HVASRCG + +LL+ HGA++ LVD
Sbjct: 178 PPGKIDENSTSQPLSSKSEALLSPGGCIVS-PGLVSSSYRLRFNNSSRKNEVASSSLSRSIIIPSMLWDGVTLWKVPFHTIGSSKRK-----------------ILRLMHALKNDSCVSQTQI--MVQYNACDNR---------QVMAHQPLTLEWFDDXXXXXXXXXXXXXXXXXKKRNIALADVKSIQVGHGTAAFQAYLARNGVKSISEKKYCFSLLGCDRTFDFFAETTCDVEVCTNALRGIIRQL---HRSVILTQQKDDGG----------APNQNEKYLCSSKSSTFSAAPSFL----------------HSGPHLSAFQQWNS---DVHKKSLFEAVKAGDVEKFSWHLDNGCPVDFLEDGTADTPLLAACRFGQGEIVSLALARGAKNDPHPSFGQTALQTAVSAGHVNCVQMILETAAPSGSDAIIVNHEDPNGEAPIHVASRCGCLSVLELLVTHGANVSLVD 590
BLAST of mRNA_A-nodosum_M_contig1209.7.2 vs. uniprot
Match: A0A485L578_9STRA (Aste57867_16326 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L578_9STRA) HSP 1 Score: 145 bits (365), Expect = 5.920e-31 Identity = 105/313 (33.55%), Postives = 147/313 (46.96%), Query Frame = 2
Query: 1928 LTLLWADPQR-DLQKFPPREMGIDKIIDIVWGHKTPAFWQQASHRGVHTLPTPALCFSIIGDGRTLDLASEILAEARQWIRALSCVARRVAAPTESTITSQGRGPAKYMVTDPERFELTGTKETYFSRSLRPDVTAKTSLVDELLSQQQPSIRVFDSHREKPVDVSRSWSYHTISAWRRQLFPAVSRGEAASVIALFEQGCPVDLVQTRTGETVLLLACRLGDVALARECLRRGSRNGILSKFGQTALHAAVAAGKESCVRLLLETAASSHSDSVVSNHRDLNNETPLHVASRCGFRGIADLLLHHGADLRLV 2863
L + W DPQ + M + ++ + G KT AF +Q +T +CFS+I R+LDLA+ EA W+ +L RR+ +T PAK T LT K + + T +S P D++ ++H + W + LF + A + +GCPVDL++ +TG+T+L LACR G VAL CL+ G++N FG TAL AV A + CVR LL AA S D+ + NH D NE PLHVA+ G I LLLHHGAD+ +V
Sbjct: 433 LCVTWTDPQHPESASASAHVMALHDVVQVKTGIKTQAFRKQLHAGKANTFFHDDVCFSLISASRSLDLAASSKEEAHVWVASL----RRMLQQQTTT------APAKADTTS----ILTSAK---IMKDFKTAATTSSS----------------------PRDLAVDTNHHAV--WLKDLFRCAKAHQLAEIANYLMEGCPVDLLEPQTGDTILFLACRAGHVALLELCLKWGAKNDPHPTFGDTALQIAVKASQPECVRQLLSIAAKSDMDTEIVNHVDHANEAPLHVAAAQGDVNILQLLLHHGADICVV 704
BLAST of mRNA_A-nodosum_M_contig1209.7.2 vs. uniprot
Match: A0A6G0M401_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0M401_9STRA) HSP 1 Score: 144 bits (364), Expect = 8.940e-31 Identity = 103/315 (32.70%), Postives = 149/315 (47.30%), Query Frame = 2
Query: 1928 LTLLWADP--QRDLQKFPPREMGIDKIIDIVWGHKTPAFWQQASHRGVHTLPTPALCFSIIGDGRTLDLASEILAEARQWIRALSCVARRVAAPTESTITSQGRGPAKYMVTDPERFELTGTKETYFSRSLRPDVTAKTSLVDELLSQQQPSIRVFDSHREKPVDVSRSWSYHTISAWRRQLFPAVSRGEAASVIALFEQGCPVDLVQTRTGETVLLLACRLGDVALARECLRRGSRNGILSKFGQTALHAAVAAGKESCVRLLLETAASSHSDSVVSNHRDLNNETPLHVASRCGFRGIADLLLHHGADLRLVD 2866
L + W DP ++ R + + +I+I GH+T AF Q V CFS++ GRTLDL + EAR W+ +L + PT++++ S T E + +L P S + PS V + R I+ WR ++F ++ E GCP+DL+++ T +T+L+LACRLG+ L CL R ++N +FG+TAL AV + CV LLL TAA S DS + NH D NN+ PLHVA+R G LLLHHGAD+ +V+
Sbjct: 503 LQITWGDPTLSGSAERKKARSLDLALVIEIREGHRTEAFTAQTESNIVKEKDK---CFSLVTRGRTLDLVAASKEEARIWVSSLRELLFASEPPTDASLMSAR------------------TIEDFKQSALSPREQDGNSSGN-------PSAVVPPTKR-------------MIAVWRNRIFNLARHDRLDDIMECLEDGCPIDLLESGTDDTLLMLACRLGNAELVELCLSRRAKNDPHPEFGETALQVAVNSSHAHCVGLLLSTAAKSDMDSEIVNHIDPNNDAPLHVAARHGDLACLQLLLHHGADICVVE 776
BLAST of mRNA_A-nodosum_M_contig1209.7.2 vs. uniprot
Match: A0A662WTT4_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WTT4_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.970e-30 Identity = 104/326 (31.90%), Postives = 156/326 (47.85%), Query Frame = 2
Query: 1901 IVNIRAAWP--LTLLWADP--QRDLQKFPPREMGIDKIIDIVWGHKTPAFWQQASHRGVHTLPTPALCFSIIGDGRTLDLASEILAEARQWIRALSCVARRVAAPTESTITSQGRGPAKYMVTDPERFELTGTKETYFSRSLRPDVTAKTSLVDELLSQQQPSIRVFDSHREKPVDVSRSWSYHTISAWRRQLFPAVSRGEAASVIALFEQGCPVDLVQTRTGETVLLLACRLGDVALARECLRRGSRNGILSKFGQTALHAAVAAGKESCVRLLLETAASSHSDSVVSNHRDLNNETPLHVASRCGFRGIADLLLHHGADLRLVD 2866
I +RA P L L W DP +K R + + + ++ GH T AF Q V CFS+I RTLDL + EA W+ +L + A ++ + S + G K++ A TS +++S +P V+ S ++AWR ++F G ++ ++ GCP+DL+++ +G+T+L+LACR G+ L CL R ++N +FG+TAL AV A + CV+LLL TAA S DS + NH D NN+ PLHVA+ G LLLHHGAD+ +V+
Sbjct: 510 ITVVRAVEPPHLQLTWGDPTVSGSTEKRGVRSLDLSLVTEVRKGHGTKAFSAQTDSSVVREKDK---CFSLITKTRTLDLVAASKEEAHIWVTSLRDLLFAPATSADALLDSART--------------IEGFKQS-----------ALTSRDPDVISDDKP--------------VAAVPSKRMVAAWRSRIFNLARNGRLDEIVECWQDGCPIDLLESGSGDTLLILACRQGNDQLVELCLSRRAKNDPHPEFGETALQVAVNACQPHCVKLLLSTAAKSEMDSEIVNHIDPNNDAPLHVAASHGDLACLQLLLHHGADICVVE 793
BLAST of mRNA_A-nodosum_M_contig1209.7.2 vs. uniprot
Match: A0A0P1AB56_PLAHL (Ankyrin n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AB56_PLAHL) HSP 1 Score: 139 bits (351), Expect = 3.440e-29 Identity = 98/315 (31.11%), Postives = 148/315 (46.98%), Query Frame = 2
Query: 1928 LTLLWADPQRD--LQKFPPREMGIDKIIDIVWGHKTPAFWQQASHRGVHTLPTPALCFSIIGDGRTLDLASEILAEARQWIRALSCVARRVAAPTESTITSQGRGPAKYMVTDPERFELTGTKETYFSRSLRPDVTAKTSLVDELLSQQQPSIRVFDSHREKPVDVSRSWSYHTISAWRRQLFPAVSRGEAASVIALFEQGCPVDLVQTRTGETVLLLACRLGDVALARECLRRGSRNGILSKFGQTALHAAVAAGKESCVRLLLETAASSHSDSVVSNHRDLNNETPLHVASRCGFRGIADLLLHHGADLRLVD 2866
+ + W DP + R + + + +I GHKT AF Q+ CFS++ RTLDL + EAR WI +L + + ++++ S A+ + E F+ K S+ +V+ K ++ + ++ WR ++F ++ E GCP+DL++ TG+T+L+LACR GD L CL R +RN +FG+TAL AV + + CV LLL TAA S DS + NH D NN+ PLHVA+R G LLLHHGAD+ +V+
Sbjct: 497 IQITWGDPTLSGVTARKNLRSLDLALVTEICEGHKTAAFTAQSESS---VAKEEEKCFSLMMQARTLDLVAASKEEARIWISSLRELISASGSSNDASLAS-----ARTI----EGFK----KSAIISKGRDGNVSGKL--------------------------IAAPTNKRMLAGWRNRIFDLARNDRLDEILECLEDGCPIDLLEGGTGDTLLILACRRGDAELVELCLSRRARNDPHPEFGETALQVAVNSSQAHCVGLLLSTAAKSDMDSEIVNHIDSNNDAPLHVAARHGDLACLQLLLHHGADICVVE 769
BLAST of mRNA_A-nodosum_M_contig1209.7.2 vs. uniprot
Match: A0A833TSV8_PHYIN (Formin Homology 2 Domain n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TSV8_PHYIN) HSP 1 Score: 139 bits (351), Expect = 3.480e-29 Identity = 102/314 (32.48%), Postives = 150/314 (47.77%), Query Frame = 2
Query: 1928 LTLLWADP-QRDLQKFPPREMGIDKIIDIVWGHKTPAFWQQASHRGVHTLPTPALCFSIIGDGRTLDLASEILAEARQWIRALSCVARRVAAPTESTITSQGRGPAKYMVTDPERFELTGTKETYFSRSLRPDVTAKTSLVDELLSQQQPSIRVFDSHREKPVDVSRSWSYHTISAWRRQLFPAVSRGEAASVIALFEQGCPVDLVQTRTGETVLLLACRLGDVALARECLRRGSRNGILSKFGQTALHAAVAAGKESCVRLLLETAASSHSDSVVSNHRDLNNETPLHVASRCGFRGIADLLLHHGADLRLVD 2866
L + W DP + + F R + + + +I GH T AF Q + + CFS++ RTLDL + EA+ W+ L R + P ES++ + + ++ L+ E Y S S +P TA T + I+AWR ++F ++ E GCP+DL++ TG+T+L+LACRLG+ L CL R ++N +FG+TAL AV + CV LLL TAA S D+ + NH D NN+ PLHVA+R G LLLHHGAD+ +V+
Sbjct: 498 LQITWGDPTSAERKNF--RSVDLALVTEIREGHSTAAFAAQTES---NVVKEKEKCFSLVMRARTLDLVAASKEEAQIWVNNL----RDLLFPAESSMDASVLSART--IESFKQSALSSRGEEYKS-SGKPTATAPTKRM--------------------------------IAAWRNRIFNLARNDRLDDILESLEDGCPIDLLEGGTGDTLLMLACRLGNAELVELCLSRRAKNDPHPEFGETALQVAVNSLHAHCVGLLLSTAAKSDMDTEIVNHIDPNNDAPLHVAARHGDLACLQLLLHHGADICVVE 767
BLAST of mRNA_A-nodosum_M_contig1209.7.2 vs. uniprot
Match: A0A662XT93_9STRA (PH domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XT93_9STRA) HSP 1 Score: 139 bits (349), Expect = 5.160e-29 Identity = 103/323 (31.89%), Postives = 154/323 (47.68%), Query Frame = 2
Query: 1910 IRAAWP--LTLLWADPQ--RDLQKFPPREMGIDKIIDIVWGHKTPAFWQQASHRGVHTLPTPALCFSIIGDGRTLDLASEILAEARQWIRALSCVARRVAAPTESTITSQGRGPAKYMVTDPERFELTGTKETYFSRSLRPDVTAKTSLVDELLSQQQPSIRVFDSHREKPVDVSRSWSYHTISAWRRQLFPAVSRGEAASVIALFEQGCPVDLVQTRTGETVLLLACRLGDVALARECLRRGSRNGILSKFGQTALHAAVAAGKESCVRLLLETAASSHSDSVVSNHRDLNNETPLHVASRCGFRGIADLLLHHGADLRLVD 2866
+RA P L L W DP +K R + + + ++ GH T AF Q + CFS+I RTLDL + EA W+ +L + A ++ + D R + G K++ + S P T+ +KPV S ++AWR ++F G ++ ++ GCP+DL+++ +G+T+L+LACR G+ L CL R ++N +FG+TAL AV A + CV+LLL TAA S DS + NH D NN+ PLHVA+ G LLLHHGAD+ +V+
Sbjct: 531 VRAVEPPHLQLTWGDPSVSGSAEKRGVRSLDLALVTEVREGHGTKAFSAQTDSS---VIKEKEKCFSLITKTRTLDLVAASKEEAHIWVSSLRDLLFAPATSADALL-------------DSARI-IEGFKQSALT-SRDPGATSD----------------------DKPVAAVPS--KRMVAAWRSRIFNLARNGRLDEIVECWQDGCPIDLLESGSGDTLLILACRQGNDQLVELCLSRRAKNDPHPEFGETALQVAVNACQPHCVKLLLSTAAKSDMDSEIVNHIDPNNDAPLHVAASHGDLACLQLLLHHGADICVVE 811 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1209.7.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1209.7.2 >prot_A-nodosum_M_contig1209.7.2 ID=prot_A-nodosum_M_contig1209.7.2|Name=mRNA_A-nodosum_M_contig1209.7.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1660bp MSIRVCSHSETHRLDSRQGNCDPLSTGNPDYQCACRAKARSRSNSPAVGDback to top mRNA from alignment at A-nodosum_M_contig1209:79806..87320- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1209.7.2 ID=mRNA_A-nodosum_M_contig1209.7.2|Name=mRNA_A-nodosum_M_contig1209.7.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7515bp|location=Sequence derived from alignment at A-nodosum_M_contig1209:79806..87320- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1209:79806..87320- >mRNA_A-nodosum_M_contig1209.7.2 ID=mRNA_A-nodosum_M_contig1209.7.2|Name=mRNA_A-nodosum_M_contig1209.7.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=4980bp|location=Sequence derived from alignment at A-nodosum_M_contig1209:79806..87320- (Ascophyllum nodosum dioecious)back to top |