mRNA_A-nodosum_M_contig12.29.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig12.29.1
Unique NamemRNA_A-nodosum_M_contig12.29.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig12.29.1 vs. uniprot
Match: D8LC94_ECTSI (SET domain and mariner transposase fusion n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC94_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 1.100e-77
Identity = 152/281 (54.09%), Postives = 182/281 (64.77%), Query Frame = 1
Query:    1 LLSFLRWSDCVSLASASSRTFFPHVKRWVEHLSRDMSRGISPEPIPCQSL------LPRSCSAGLRLESIRIPADLSIGGPVPPSFRYLNEAICPSGRAPDRG-DLLAGCSCKVVCGGDKDEERPTCPCARLNASVQSGYAPLFECHAACSCDLKCPLRATQPGGGRSIPRM-KLGFISQKGWGAFSVDAIPRGTFVAEYTGEALTLEEARKRVCAYDRDGLNYVLITQEFFQGGKQVWRTVVDATTSGNVSRFFNHSCEPTLSVFA--IRR---GSMTPR 804
            LLSFL W D V+ A  S+   F  VK  ++    D+S G SP PIPC S       + ++   G    S       S+GGPVPPSF YLNEAI       D G D L GC+C   CG D       CPC +LN +VQSG APLFECH +C+C + C LRATQ G    +P M +L ++ +KGWGA+SV AI  GT+VA+YTGE L + EAR+RV AYDRDGLNYVL TQEFFQGGKQV++T+VDATT GNVSRFFNHSCEPTLSVF   +RR   G+  PR
Sbjct:   18 LLSFLGWEDAVAFAITST-LLFVQVKAIIQKQCDDISCGSSPYPIPCDSAHRPLHGVQQATPGGSSHSSQSFK--WSLGGPVPPSFMYLNEAIHAFD---DSGADELEGCACFGGCGVDDT----LCPCVQLNVAVQSGPAPLFECHTSCTCGIACRLRATQRGAASKVPPMLRLRYMGKKGWGAYSVGAIAGGTYVADYTGEVLPVPEARRRVHAYDRDGLNYVLTTQEFFQGGKQVFQTIVDATTCGNVSRFFNHSCEPTLSVFVAVVRRLHVGAFDPR 288          
BLAST of mRNA_A-nodosum_M_contig12.29.1 vs. uniprot
Match: L8GPN6_ACACA (SET domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GPN6_ACACA)

HSP 1 Score: 147 bits (371), Expect = 4.240e-38
Identity = 87/240 (36.25%), Postives = 117/240 (48.75%), Query Frame = 1
Query:  403 PLFECHAACSCDLKCPLRATQPGGGRSIPRMKLGFISQKGWGAFSVDAIPRGTFVAEYTGEALTLEEARKRVC-AYDRDGLNYVLITQEFFQGGKQVWRTVVDATTSGNVSRFFNHSCEPTLSVFAIRRGSMTPRLAFFTLEDVVAGSELTYDYEAAGSAGGNSNCGERFSQPALKVPRRMAPLESTLERPYKRSSINESVPVCLAKGGGSSSPGGFRDADETLRRRCLCGSQRCRGLLP 1119
            PLFECH+ C C   C  R  Q G   ++P +++   + KGW    +  + +G FV+EY GE ++ EEA++R    YDR GLNY+L+ +EF        RT +D T  GNVSRFFNHSC+P + +F +R GS+ PRLAFF   DV AG ELTYDY                                                     G GS+     + AD    R+C CG++ CRG+LP
Sbjct:   65 PLFECHSRCGCSADCASRVVQKG--ITLP-LEVFMSATKGWSVRVLSPVRKGQFVSEYAGEVVSTEEAQRRWRDEYDRAGLNYLLVVREFIPARGATLRTNIDGTRLGNVSRFFNHSCDPNMLLFLVRVGSLIPRLAFFVCRDVAAGEELTYDY-----------------------------------------------------GHGST-----QAADAPATRQCHCGARHCRGVLP 243          
BLAST of mRNA_A-nodosum_M_contig12.29.1 vs. uniprot
Match: A0A7K9Y7P1_9GALL (SETMR methyltransferase (Fragment) n=1 Tax=Odontophorus gujanensis TaxID=886794 RepID=A0A7K9Y7P1_9GALL)

HSP 1 Score: 145 bits (366), Expect = 1.880e-37
Identity = 98/272 (36.03%), Postives = 122/272 (44.85%), Query Frame = 1
Query:  304 GCSCKVVCGGDKDEERPTCPCARLNASVQSGYAPLFECHAACSCDLKCPLRATQPGGGRSIPRMKLGFISQKGWGAFSVDAIPRGTFVAEYTGEALTLEEARKRVCAYDRDGLNYVLITQEFFQGGKQVWRTVVDATTSGNVSRFFNHSCEPTLSVFAIRRGSMTPRLAFFTLEDVVAGSELTYDYEAAGSAGGNSNCGERFSQPALKVPRRMAPLESTLERPYKRSSINESVPVCLAKGGGSSSPGGFRDADETLRRRCLCGSQRCRGLLP 1119
            GC C+      +     +CPCAR       G APLFEC+A C C   C  R  Q G      R+++    +KGWG  ++  I  GTFV EY GE L L+EAR+RV A      NY++  +E   GG QV  T VD T  GNV RF NHSCEP L +  +R  SM P+LA F   D+ AG EL YDY              RF        R + P E       ++ +  E                     D  LR+ C CGS  C   LP
Sbjct:   23 GCPCRA-----RSCSPHSCPCARR------GAAPLFECNAMCRCSDGCGKRVVQRG---LRVRLQVFLTDKKGWGVRALQPIAEGTFVCEYAGEVLGLDEARRRVRAQTAQDNNYIIAVREHVHGG-QVLETFVDPTYVGNVGRFLNHSCEPNLVMVPVRVDSMVPKLALFAAADISAGEELCYDYSG------------RF--------RNLPPNEG------EQKAAEE---------------------DNVLRKPCFCGSPTCAAFLP 232          
BLAST of mRNA_A-nodosum_M_contig12.29.1 vs. uniprot
Match: UPI001A9863EB (histone-lysine N-methyltransferase SETMAR n=1 Tax=Gasterosteus aculeatus aculeatus TaxID=481459 RepID=UPI001A9863EB)

HSP 1 Score: 142 bits (357), Expect = 1.320e-35
Identity = 107/318 (33.65%), Postives = 139/318 (43.71%), Query Frame = 1
Query:  232 PSFRYLNEAICPSGRAPDRGDL-LAGCSCKVV-CGGDKDEERPTCPCARLNA-------------SVQSGY-APLFECHAACSCDLKCPLRATQPGGGRSIPRMKLGFISQKGWGAFSVDAIPRGTFVAEYTGEALTLEEARKRVCAYDRDGLNYVLITQEFFQGGKQVWRTVVDATTSGNVSRFFNHSCEPTLSVFAIRRGSMTPRLAFFTLEDVVAGSELTYDYEAAGSAGGNSNCGERFSQPALKVPRRMAPLESTLERPYKRSSINESVPVCLAKGGGSSSPGGFRDADETLRRRCLCGSQRCRGLLPCNRTII 1137
            P F+Y  + +   G   D  ++ L GCSC+   C  D      TCPC R                +  SGY +P+FEC+A C+C   C  R  Q  GG  + R+++     KGWG  ++ AIPRGTFV EY GE + LEEAR+R  A      NY++  +E   G   V  T VD    GN  RF NHSC P L +  +R  S+ PRLA F   +V A  ELT+DY      GG  N   R     L  PR                             GG+         D   R+ C CG+  C   LP + +II
Sbjct:   24 PQFQYSPDNVQGPGCTTDPSEVTLPGCSCRSASCCSD------TCPCLRTCGRAYDGAGALLALGAAGSGYCSPVFECNALCACSDACSSRVVQ--GGLRL-RLEVYATENKGWGVRTLQAIPRGTFVCEYAGEVIGLEEARRRQLAQRPGDNNYIIAVREH-AGEGSVTETFVDPAAVGNAGRFLNHSCRPNLFMQPVRVHSLVPRLALFAGRNVAAREELTFDY-----TGGYGN---RLPAERLATPR----------------------------DGGT---------DGLQRKECHCGANNCGRFLPLDLSII 286          
BLAST of mRNA_A-nodosum_M_contig12.29.1 vs. uniprot
Match: A0A6P3WB48_CLUHA (histone-lysine N-methyltransferase SETMAR n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A6P3WB48_CLUHA)

HSP 1 Score: 140 bits (353), Expect = 8.380e-35
Identity = 100/335 (29.85%), Postives = 150/335 (44.78%), Query Frame = 1
Query:  181 LESIRIPADLS-IGGPVPPSFRYLNEAICPSGRAPDRGDL-LAGCSCKVVCGGDKDEERPTCPCARLNASVQSGY--------------APLFECHAACSCDLKCPLRATQPGGGRSIPRMKLGFISQKGWGAFSVDAIPRGTFVAEYTGEALTLEEARKRVCAYDRDGLNYVLITQEFFQGGKQVWRTVVDATTSGNVSRFFNHSCEPTLSVFAIRRGSMTPRLAFFTLEDVVAGSELTYDYEAAGSAGGNSNCGERFSQPALKVPRRMAPLESTLERPYKRSSINESVPVCLAKGGGSSSPGGFRDADETLRRRCLCGSQRCRGLLPCNRTII 1137
            LE++ +  D S +G    P+F+Y  E +   G + D  ++ L GC C +     +  +   C C +       G                P+FEC+A C C   C  R  Q G      R+ +     +GWG  +++AIPRG+FV EY GE + LEEAR R  +   + +NY++  +E+   G+    T VD    GNV RF NHSC+P L +  +R  SM PRL+ F ++D+V   ELT+DY              R++    K+      L S      ++S   ES         GS             R+ C CG+  C G LP + T++
Sbjct:   21 LENVVVVIDSSDVGKGEFPNFQYTPENVPGPGCSSDPSEITLPGCQCHL-----QSCQSEQCQCLQRYGPAYDGQHRLLGRRDEESHYSRPVFECNALCDCSEDCSNRVVQKGVSL---RLCVYRTKDRGWGVRTMEAIPRGSFVCEYAGEVIGLEEARLRQLSQGPEDMNYIIAVREYAGEGESR-ETFVDPLARGNVGRFINHSCQPNLFMVPVRVHSMVPRLSLFAVQDIVPDEELTFDYSG------------RYNNHTAKI------LTSEQSHMSEQSDQGEST--------GS-----------LQRKHCHCGALNCTGYLPLDITVL 309          
BLAST of mRNA_A-nodosum_M_contig12.29.1 vs. uniprot
Match: UPI0012EDE427 (histone-lysine N-methyltransferase SETMAR n=1 Tax=Anarrhichthys ocellatus TaxID=433405 RepID=UPI0012EDE427)

HSP 1 Score: 139 bits (349), Expect = 2.440e-34
Identity = 107/337 (31.75%), Postives = 147/337 (43.62%), Query Frame = 1
Query:  181 LESIRIPADLSIGGPVPPSFRYLNEAICPSGRAPDRGDL-LAGCSCKV-VCGGDKDEERPTCPCARLNASV-------------QSGY-APLFECHAACSCDLKCPLRATQPGGGRSIPRMKLGFISQKGWGAFSVDAIPRGTFVAEYTGEALTLEEARKRVCAYDRDGLNYVLITQEFFQGGKQVWRTVVDATTSGNVSRFFNHSCEPTLSVFAIRRGSMTPRLAFFTLEDVVAGSELTYDYEAAGSAGGNSNCGERFSQPALKVPRRMAPLESTLERPYKRSSINESVPVCLAKGGGSSSPGGFRDADETLRRRCLCGSQRCRGLLPCNRTII*R 1143
            LE++ +  + S      P F+Y  + I   G   D  ++ L GCSC+   C  +       C C R                   SGY AP+FEC+A C+C   C  R  Q  GG  + R+++     KGWG  ++ AIPRGTFV EY GE + LEEAR+R  A   +  NY++  +E   G   V  T VD    GNV RF NHSC+P L +  +R  S+ PRLA F   ++ A  ELT+DY      GG SN                         P +  S      +  ++             D   R+ C CG+  C   LP + +II R
Sbjct:   13 LENVPVFIERSSADMTFPEFQYSTDNIQGPGCTADPTEVALPGCSCRSRSCCAEN------CTCLRTRGRAYDSAGALLTLGPTDSGYCAPVFECNALCACSDACSNRVVQ--GGMRL-RLEVYGTENKGWGVRTLGAIPRGTFVCEYAGEVIGLEEARRRQLAQSSEENNYIIAVREH-AGTGAVAETFVDPAAVGNVGRFLNHSCQPNLFMQPVRVHSLVPRLALFAGRNIDAQEELTFDY-----TGGYSN-----------------------HLPVELLSTQRDADIWASR------------TDGLQRKECHCGANNCVHFLPLDLSIINR 299          
BLAST of mRNA_A-nodosum_M_contig12.29.1 vs. uniprot
Match: UPI001C70E26D (uncharacterized protein LOC122257601 n=1 Tax=Penaeus japonicus TaxID=27405 RepID=UPI001C70E26D)

HSP 1 Score: 145 bits (366), Expect = 4.460e-34
Identity = 103/315 (32.70%), Postives = 146/315 (46.35%), Query Frame = 1
Query:  292 DLLAGCSCKVVCGGDKDEERPTCPC----------ARLNASVQSGYAPLFECHAACSCDLKCPLRATQPGGGRSIPRMKLGFISQKGWGAFSVDAIPRGTFVAEYTGEALTLEEARKRVCAYDRDGLNYVLITQEFFQG---GKQVWRTVVDATTSGNVSRFFNHSCEPTLSVFAIRRGSMTPRLAFFTLEDVVAGSELTYDYEAAGSAGGNSNCGERFSQPALKVPRRMAPLESTLERPYK--------RSSIN--ESVPVC--------------LAKGGGSSSPGGFRDADETLRRRCLCGSQRCRGLLPCN 1125
            D + GC C  VC  D       C C           +L+AS   G  P+FEC+  C CD  CP R  Q G    +  +++   ++KG+G  ++  IP+ TFV EY GE ++++EA+ R      +  NY+L+ +E F G   G Q+  T++D T  GN+ R+ NHSC P L V  +R  SM P  A F + D+ AG EL YDY+++   GG        S  AL+  R     E   E P           SS +  E+V  C              +A G G   PG        + + CLCGS+ C+  LP N
Sbjct: 1105 DQIEGCKCIGVCSED-------CTCIVQFGQPYRDGKLDAS--HGINPIFECNDECGCDECCPNRLVQKG---PLIGLEITLYAEKGFGVRTIHFIPKYTFVCEYAGELISIQEAQNRFAKQKENESNYILVMREHFWGEKTGPQI--TIIDPTVIGNLGRYLNHSCNPNLIVVPVRIDSMVPVAALFAIRDIHAGEELCYDYDSSNDIGGTPQLSASTS--ALQKQRSYIVREELCEDPQNYVTSVAVGASSGDDIENVAQCRYEQQGKVMKKMLNIAHGSGHK-PG--------IPKPCLCGSENCKVFLPVN 1394          
BLAST of mRNA_A-nodosum_M_contig12.29.1 vs. uniprot
Match: UPI0018A7DB5A (uncharacterized protein LOC119585994 n=2 Tax=Penaeus TaxID=133894 RepID=UPI0018A7DB5A)

HSP 1 Score: 143 bits (361), Expect = 2.040e-33
Identity = 94/309 (30.42%), Postives = 144/309 (46.60%), Query Frame = 1
Query:  292 DLLAGCSCKVVCGGDKDEERPTCPCA------RLNASVQSGYA--PLFECHAACSCDLKCPLRATQPGGGRSIPRMKLGFISQKGWGAFSVDAIPRGTFVAEYTGEALTLEEARKRVCAYDRDGLNYVLITQEFFQG---GKQVWRTVVDATTSGNVSRFFNHSCEPTLSVFAIRRGSMTPRLAFFTLEDVVAGSELTYDYEAAGSAGGNSNCGERFSQPALKVPRRMAPLESTLERPYKRSSINESVPVCLAKGGGSS--SPGGFRDADETLR---------------RRCLCGSQRCRGLLPCNRTI 1134
            D + GC C   C  D       C C         +  + +GY   P+FEC+  C CD  CP R  Q G    +  +++   S+KG+G  +   IP+ +FV EY GE ++++EA+ R      +  NY+L+ +E F G   G Q+  TVVD T  GN+ R+ NHSC P L V  +R  SM P  A F + D+  G EL YDY+++ +  G S      S     + R  + L   L     ++S+  S  V  + G      S  G++  ++ ++               + CLCGS+ C+  LP N  +
Sbjct: 1179 DQIEGCKCAGTCSKD-------CTCIVQFGQPYKDGKLDAGYGINPIFECNDECGCDECCPNRLVQKG---PLNGLEITLYSEKGFGVRTTYFIPQNSFVCEYAGELISIQEAKIRFEKQKENESNYILVMREHFGGEKTGPQI--TVVDPTVIGNLGRYINHSCSPNLIVVPVRIDSMVPVAALFAIRDIQPGEELCYDYDSSNNISGASQLAMNMSS----LQRGRSSLFRDLSFEDAQNSVTSSA-VATSSGENQENYSQSGYKQQEQVMKMLNVAHESGSKPVISKPCLCGSENCKVFLPVNNML 1470          
BLAST of mRNA_A-nodosum_M_contig12.29.1 vs. uniprot
Match: A0A1Y1ZE84_9FUNG (Histone-lysine N-methyltransferase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1ZE84_9FUNG)

HSP 1 Score: 136 bits (342), Expect = 2.210e-33
Identity = 94/265 (35.47%), Postives = 132/265 (49.81%), Query Frame = 1
Query:  106 MSRGISPEPIPCQSLLPRSCSAGLRLESIRIPADLSIGGPVPPSFRYLNEAICPSGRAPDRGDLLAGCSCKVVCGGDKDEERPTC-------PCARLNASVQSGYAPLFECHAACSCDLKCPLRATQPGGGRSIPRMKLGFISQKGWGAFSVDAIPRGTFVAEYTGEALTLEEARKRVCAYDRDGLNYVLITQEFFQGGKQVWRTVVDATTSGNVSRFFNHSCEPTLSVFAI---RRGSMTPRLAFFTLEDVVAGSELTYDYEAA 870
            M +   P  +  Q LL ++     ++  I +  ++   GP P +F+++NE I   G      D L GC C   C   K  +  TC       P  R    +Q G A ++EC++ C C   C  R  Q G  R+I  +++     KGWG  +++ IP+GTFV EY GE +T EEA KR  AYD  GL Y L   +F  G +      +DA   GNVS FFNHSC+P L V+ +          RLAFF  +D+   +ELT+DY  A
Sbjct:    1 MKQPPKPNVLAFQELLDKA-----KVPKISVVNEIDDMGP-PANFQFINENIYTKGVPKMSTDFLVGCECTDGCS-PKTAKNCTCIANMDSLPYRRGKLQLQPGQA-IYECNSLCKCGPDCSNRVVQKG--RTI-ELQIVKTQHKGWGVRTMEPIPKGTFVEEYAGEIITNEEAEKRGQAYDACGLTY-LFDLDFECGAESDCDFTIDAYRYGNVSHFFNHSCDPNLRVYPVFVDHWNLKMHRLAFFATKDIPRFTELTFDYAGA 253          
BLAST of mRNA_A-nodosum_M_contig12.29.1 vs. uniprot
Match: A0A2G5BAS7_COERN (Histone-lysine N-methyltransferase n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BAS7_COERN)

HSP 1 Score: 134 bits (337), Expect = 3.150e-32
Identity = 80/231 (34.63%), Postives = 113/231 (48.92%), Query Frame = 1
Query:  229 PPSFRYLNEAICPSGRAPDRGDLLAGCSCKVVCGGDKDEERPTCPCARLN-------ASVQSGYAPLFECHAACSCDLKCPLRATQPGGGRSIPRMKLGFISQKGWGAFSVDAIPRGTFVAEYTGEALTLEEARKRVCAYDRDGLNYVLITQEFFQGGKQVWRTVVDATTSGNVSRFFNHSCEPTLSVFAIRRGSMTPRL---AFFTLEDVVAGSELTYDYEAAGSAGGNS 891
            P +F Y+N+++C S   P     +  C CK  C  D       CPC R           V++G A L EC   C C + C  R  Q G G    + ++     KGWG  +  A+ RGTF+ EY GE ++ EEA +R  A    GL Y+        GG ++    +DA   GN++ FFNHSC+P + ++ +      PRL   AFF   D++AG EL +DY  A S GG +
Sbjct:  107 PENFVYINKSVC-SDEVPRPCSPMFPCECKDKCVAD-------CPCVRERYYDKNGRVQVEAGTA-LMECGPKCGCGVNCSTRVVQRGSG---VKFEIQRYEHKGWGVVTRTALARGTFIGEYVGELISFEEAEERGLADTAMGLTYLFDVDMACTGG-EIADFSIDAKMQGNITHFFNHSCQPNMEIYPVYVEHRDPRLHRMAFFAARDILAGEELAFDYSPAASDGGGA 324          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig12.29.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC94_ECTSI1.100e-7754.09SET domain and mariner transposase fusion n=1 Tax=... [more]
L8GPN6_ACACA4.240e-3836.25SET domain containing protein n=1 Tax=Acanthamoeba... [more]
A0A7K9Y7P1_9GALL1.880e-3736.03SETMR methyltransferase (Fragment) n=1 Tax=Odontop... [more]
UPI001A9863EB1.320e-3533.65histone-lysine N-methyltransferase SETMAR n=1 Tax=... [more]
A0A6P3WB48_CLUHA8.380e-3529.85histone-lysine N-methyltransferase SETMAR n=1 Tax=... [more]
UPI0012EDE4272.440e-3431.75histone-lysine N-methyltransferase SETMAR n=1 Tax=... [more]
UPI001C70E26D4.460e-3432.70uncharacterized protein LOC122257601 n=1 Tax=Penae... [more]
UPI0018A7DB5A2.040e-3330.42uncharacterized protein LOC119585994 n=2 Tax=Penae... [more]
A0A1Y1ZE84_9FUNG2.210e-3335.47Histone-lysine N-methyltransferase n=1 Tax=Basidio... [more]
A0A2G5BAS7_COERN3.150e-3234.63Histone-lysine N-methyltransferase n=1 Tax=Coemans... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig12contigA-nodosum_M_contig12:354783..358949 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LC94
PFAMsLin-8,Pre-SET,SAD_SRA,SET
Model size1240
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K11419,ko:K11433
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,map00310
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000785,GO:0000790,GO:0000792,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005720,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0070013
Exons4
Evalue7.78e-72
EggNOG OGsCOG2940@1|root,KOG1082@2759|Eukaryota
Ec32 ortholog descriptionSET domain protein
Ec32 orthologEc-14_005625.1
EC2.1.1.43
DescriptionHistone-lysine N-methyltransferase
Cds size1035
COG categoryZ
BRITEko00000,ko00001,ko01000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig12.29.1prot_A-nodosum_M_contig12.29.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig12 354888..358849 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866618.5115945-UTR-A-nodosum_M_contig12:354782..3548871680866618.5115945-UTR-A-nodosum_M_contig12:354782..354887Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig12 354783..354887 +
1680866618.563414-UTR-A-nodosum_M_contig12:358849..3589491680866618.563414-UTR-A-nodosum_M_contig12:358849..358949Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig12 358850..358949 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866618.5264034-CDS-A-nodosum_M_contig12:354887..3551741680866618.5264034-CDS-A-nodosum_M_contig12:354887..355174Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig12 354888..355174 +
1680866618.536932-CDS-A-nodosum_M_contig12:357250..3575361680866618.536932-CDS-A-nodosum_M_contig12:357250..357536Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig12 357251..357536 +
1680866618.54741-CDS-A-nodosum_M_contig12:357914..3580131680866618.54741-CDS-A-nodosum_M_contig12:357914..358013Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig12 357915..358013 +
1680866618.5553522-CDS-A-nodosum_M_contig12:358486..3588491680866618.5553522-CDS-A-nodosum_M_contig12:358486..358849Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig12 358487..358849 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig12.29.1

>prot_A-nodosum_M_contig12.29.1 ID=prot_A-nodosum_M_contig12.29.1|Name=mRNA_A-nodosum_M_contig12.29.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=345bp
MSRGISPEPIPCQSLLPRSCSAGLRLESIRIPADLSIGGPVPPSFRYLNE
AICPSGRAPDRGDLLAGCSCKVVCGGDKDEERPTCPCARLNASVQSGYAP
LFECHAACSCDLKCPLRATQPGGGRSIPRMKLGFISQKGWGAFSVDAIPR
GTFVAEYTGEALTLEEARKRVCAYDRDGLNYVLITQEFFQGGKQVWRTVV
DATTSGNVSRFFNHSCEPTLSVFAIRRGSMTPRLAFFTLEDVVAGSELTY
DYEAAGSAGGNSNCGERFSQPALKVPRRMAPLESTLERPYKRSSINESVP
VCLAKGGGSSSPGGFRDADETLRRRCLCGSQRCRGLLPCNRTII*
back to top

mRNA from alignment at A-nodosum_M_contig12:354783..358949+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig12.29.1 ID=mRNA_A-nodosum_M_contig12.29.1|Name=mRNA_A-nodosum_M_contig12.29.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4167bp|location=Sequence derived from alignment at A-nodosum_M_contig12:354783..358949+ (Ascophyllum nodosum dioecious)
CTTCTATCCTTTCTTCGATGGTCGGACTGCGTTTCTCTAGCTTCCGCTTC CTCGCGGACATTTTTCCCGCACGTCAAGCGCTGGGTCGAGCACCTGTCGA GAGATATGTCGCGCGGGATAAGTCCAGAACCGATACCATGCCAATCGCTT CTTCCGCGCTCGTGTAGCGCGGGATTGCGCTTGGAGTCCATACGTATACC GGCAGATCTCAGTATTGGGGGACCCGTGCCGCCTAGCTTCAGATATCTGA ACGAAGCGATATGCCCTTCAGGGCGTGCACCTGACCGCGGTGATTTGTTG GCTGGCTGTTCCTGTAAAGTTGTCTGCGGCGGAGACAAGGACGAGGAACG CCCGACCTGTCCATGCGCGCGGTTGAATGCCTCAGTTCAAAGGTGAAATG GGATAAATGATTACCTGATAATTAGGGCCGGTCTTCTCGAGCCGCAAATT TCACACAATTGTCCACGAAATGATGGAGGGAACTTCCGCCTGTTCTTATC GAGGAATTGTTTGCTTGCCATTTTTTTCAAACTTTCACAATTTCTGCCAA CAGTAGACGCACAGACCTGCACAACCAAACGCTAGACGTTCAGCATACGC GCTAGCGAAATGAAGACCTGAAACTACTTTGTCCTCTTCTGCTCGAGTTC GGACCCACCACCACTGGCGCTCAATCGACGGACAGACCGAAAAAGTCGTG GTGCGAAACTTGGTACTGTATCATATATGGTGTATTTTTGTACCAAATTT ACAGTGTTTCATCCATTCTGGACATCAAGTTCGTTAGACGTAGACCGCAC GATACAAATCCATTTTCGTACCTTGATTTTAGACAGAACAAGTGACTCGT CGACCGTGAAGTCAATACCTAACGAATTAACGGACGAAGTTTTTCAAACG AGTCAGAAGGTTTGAGCGTATTTTCTACCAGAGCTGAAGTTCTGAGCGTT GAGTTCAGCCCGGCAACAAGAACAGAAGTACGAGTAAACGCGCTGCCAAA ATAAAGAACTGGACCTACTGTGTCCTCTTCTGCTCGAGTTCGGACTCCAC CACCACTGGCGCTCAGTCGACGGGCAGACCGAAAAAGTTGTGGAGCGAAA CTTGGTACTGTATCATATATGGTGTATTTTTGTGCCAAATTTACAGCACA GCCACTATATACTAGACCGCATAATTTGTGTGTGTGTGTGTTTTCCTCCC ATCCATTGTGGACATCAAGTTCGTTGGACGTACCATACCAGCCGGGGTCA CACAGGAGGAAGGCCACACAGGATTTCTCATCCACCTTCTTTCTGCGGTG CGTGCCATGATTTTTCTCGCGAGAAGGATTCAGCTATTCCTTTCCCTCGT CGACCGTGAAAACGAATTTTGTGTACTAAAGATTTCATCGTTCTCGACCC GTTTGGCATCAATATTGCGTGTCATTCTACACCAGGACCGTACACGACGA ATTATGGACTACTCAATGGTCTACAGCAGTTTGTCGTTTCCACCAGACAC TTGTACTATTACCATCAATACATCATGAACCGTCGTCGTGCATCGTATTA AATTTTAGTTTTCGAAGTTTAGGGAAGCAGTGGACCTGAGTCCTTCCCCA CAGCATTCTTTTGGCCCAGTGCGACGATCATGAGGGAAACCAGCTAAACA ATATTAATATAATAGGTAGAATTATTGTGGTAACAACCTCTACAACACTG TAAAACATGTGCATGTGTATGGTCATCATATATATGATAGCCGAGTATGG ATCAACCGGGTAAGGTTGCCAATCCTGCTCGCGGTCAGCTGAAAAGGGAA AATGAATATTTCTGTGTCCTCGTTCGCTCCTGAGAATCTGGTCTCGCGAG ACGGATTCGGCCGTCCCGTCCCGCGTCAGTCTGCTAATTCTCTACACTCA GGCTGAATCTGGTGCTTACTCACGGGATTCGTCCCGATTTCCGCGGCGGC GTCCATTTATTTATTTTAAACCGTCATACACCATCGGGTCAATCCCGAGT TTATGGGGTCACGCAATTGCGTACCAATGGCGTTCATTGCGGAGAGTCCG CCAGCACAGGGCCAGTAGTCCTCACGGTAGTTCCAGTAACGGGTGCTGCC TTCGCCGGTTACCGTAAACCAAATAATGGACGCTTCTGTTTTCCCACACC CACTATTGGTATTGACATCAGTATCCACTCGAACCCAACTGAAGACGAGG TACTCTGGATTTTCAACATGATTCATTGTTCGATTTCAAACCCCATGCGT CTGGAAATACCTACCGCGGAAGGGGGATGAGCTCCGTGTGTCCAATATTC GGTAATGGTATTGCTCTAGGGGTAGATGTACCGGTACGCGCGAAACGTAG AGGAGTCCTTGCTTTTTCAAGGGGAAACCGCGTCACCCACTGTTTGTCCC GACCTTACTTCCCCGTCGTTCGACCTTATACAATCAAACCTTTGCCATTT CATGCGTGTGTTTTATAGCGGATATGCGCCCCTTTTCGAGTGCCACGCGG CGTGCTCATGTGACTTGAAATGCCCGCTGAGGGCGACGCAGCCAGGAGGG GGCCGGTCGATCCCGCGCATGAAGTTAGGTTTCATTAGCCAAAAGGGTTG GGGAGCCTTCTCGGTCGACGCCATTCCGCGTGGCACGTTCGTGGCAGAGT ACACGGGAGAAGCGTTGACGCTTGAGGAGGCGAGGAAGAGAGTGTGTGCG TACGACCGAGACGGGCTGAACTACGTCTTGATCACGCAGGAGTTCTTCCA AGGGGTGAGATTTTCTCCGCTCGGCGACAGGGCGTTGTCTTAACGAGGGT TTGATCGTGGATCCGAGCAGATATTTTCAGCCGAGGATCGTCGGATACGT GCTTTTACCGCTGAATGGCTACTAGGCCACTGTCACTCTCTTTTTTGAGA CCGAAAAGGTCGTGTTTTTTCGTCAGACATGACCTCTTTTACGGCCAAAA AGGTCGCATTTCATCAGACATGACGCGAGTGATACAAACATTTTTTTTTT GTATGCACGAAGTACCTCTTATCTTATTAATAGTACAGTATGTATGCATA TCAGTTCGGCGGGTCGATTGCAACGTGCACCTATTAGATACCTACATATA CACGTATACATGTATATATACTCTTCTTGCAGGGAAAGCAGGTGTGGCGA ACGGTTGTCGACGCCACGACCTCGGGGAACGTATCCAGGTTTTTCAATCA TTCCTGCGAGCCTACCCTCTCTGTGTTTGCGGTGAGTTTGAACGGTGCAA ATATCGCGAGTGCGGACAGCTTGGCGCTCGGTCCGACGTAGCCTGGGGCG GGCAGCAAAATCAGCCAGTACACACAAAAAATAAGCACAAGGGTACGGGT AGAGAGTCTTACTAATCGCGTTGTCTTCCTACTACGCTGACGACACGCCG TGCGTAGTGGTGATTTTTGCTAGAGTCTCCGCGTGGAACCTTCCTGACAC TGACGCGATGCTGCTAAAGTATCTGCTCGGCGCCCTGCAGCGCGGAACCA CGCGTTCGAACGATGTCGGGTCAGGGTTAGGGTTCTTGGGAGCACAATAG TTTTGTCGAGCTCGTACTTTTTCTGCACGATATCAGGTTAGAACTATGCC TACTACTGGCGTAATAATGATGAACATAATTATATAGCCCCCCCGTCAGT GCAAAGGGACAAAAAGCATCCCCACGACTGCCCCTCTCCTCGAATCCTGT GCAGATTCGGCGAGGTTCTATGACACCACGCCTCGCTTTCTTCACTCTGG AAGACGTTGTGGCAGGCAGTGAACTGACCTACGACTACGAAGCGGCAGGA TCTGCGGGGGGGAACTCTAATTGTGGCGAAAGATTTTCACAGCCAGCCCT CAAGGTTCCACGACGAATGGCCCCTCTGGAAAGCACCCTTGAGCGTCCGT ACAAGCGTAGTAGTATTAATGAAAGCGTCCCCGTGTGCTTAGCAAAGGGG GGGGGCAGTAGCAGCCCGGGCGGGTTTCGCGATGCTGATGAGACGCTAAG ACGGAGATGTTTGTGCGGGTCGCAGCGTTGCCGAGGTCTTTTACCGTGTA ACCGAACCATCATTTGAAGATTTCCTTGCCTATCGTTACGAGTGCCAACC GCAGTCTGACGTGGACTGCGATTCATTCTGAATTCCGTTTTGGGCATTGC ATATCATATTTGGGGGG
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig12:354783..358949+

>mRNA_A-nodosum_M_contig12.29.1 ID=mRNA_A-nodosum_M_contig12.29.1|Name=mRNA_A-nodosum_M_contig12.29.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1035bp|location=Sequence derived from alignment at A-nodosum_M_contig12:354783..358949+ (Ascophyllum nodosum dioecious)
ATGTCGCGCGGGATAAGTCCAGAACCGATACCATGCCAATCGCTTCTTCC
GCGCTCGTGTAGCGCGGGATTGCGCTTGGAGTCCATACGTATACCGGCAG
ATCTCAGTATTGGGGGACCCGTGCCGCCTAGCTTCAGATATCTGAACGAA
GCGATATGCCCTTCAGGGCGTGCACCTGACCGCGGTGATTTGTTGGCTGG
CTGTTCCTGTAAAGTTGTCTGCGGCGGAGACAAGGACGAGGAACGCCCGA
CCTGTCCATGCGCGCGGTTGAATGCCTCAGTTCAAAGCGGATATGCGCCC
CTTTTCGAGTGCCACGCGGCGTGCTCATGTGACTTGAAATGCCCGCTGAG
GGCGACGCAGCCAGGAGGGGGCCGGTCGATCCCGCGCATGAAGTTAGGTT
TCATTAGCCAAAAGGGTTGGGGAGCCTTCTCGGTCGACGCCATTCCGCGT
GGCACGTTCGTGGCAGAGTACACGGGAGAAGCGTTGACGCTTGAGGAGGC
GAGGAAGAGAGTGTGTGCGTACGACCGAGACGGGCTGAACTACGTCTTGA
TCACGCAGGAGTTCTTCCAAGGGGGAAAGCAGGTGTGGCGAACGGTTGTC
GACGCCACGACCTCGGGGAACGTATCCAGGTTTTTCAATCATTCCTGCGA
GCCTACCCTCTCTGTGTTTGCGATTCGGCGAGGTTCTATGACACCACGCC
TCGCTTTCTTCACTCTGGAAGACGTTGTGGCAGGCAGTGAACTGACCTAC
GACTACGAAGCGGCAGGATCTGCGGGGGGGAACTCTAATTGTGGCGAAAG
ATTTTCACAGCCAGCCCTCAAGGTTCCACGACGAATGGCCCCTCTGGAAA
GCACCCTTGAGCGTCCGTACAAGCGTAGTAGTATTAATGAAAGCGTCCCC
GTGTGCTTAGCAAAGGGGGGGGGCAGTAGCAGCCCGGGCGGGTTTCGCGA
TGCTGATGAGACGCTAAGACGGAGATGTTTGTGCGGGTCGCAGCGTTGCC
GAGGTCTTTTACCGTGTAACCGAACCATCATTTGA
back to top