mRNA_A-nodosum_M_contig12.17.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig12.17.1
Unique NamemRNA_A-nodosum_M_contig12.17.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig12.17.1 vs. uniprot
Match: A0A6H5KJT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT5_9PHAE)

HSP 1 Score: 437 bits (1124), Expect = 7.450e-153
Identity = 208/265 (78.49%), Postives = 236/265 (89.06%), Query Frame = 1 
Query:    7 EEGYLTWLSKRIERSQRPPFIKIPRAKMTRDFAVLLMRSSYQVCDELDFVPMDDFQKRFFLLRQDEWSPYKENFPRIKQGDLTDPDYFDFISFAQYATIAMAMRNGRDIFEEKVGAEGDKRTVQRDPELKDNGRLPEEHARRVGDRILAYCTETFGSTKLAPVIANGLSVGNLQEGCDRIMNLLRLNFYVLDSSVGSQVDRRILTVKATAPATIWGQQVLAQRRDRPANDFEAKTVLAYLRACGLVGATYSTAFSGLDVIHTFRL 801
            +EGY++WL+++IER++RPPF+KI RA++ RDFAVLLMR+SYQV DELDFVPMDDFQK+FFL RQ EW  YKENFPRIKQGDL DPDYFDFISFAQYA++A AMRNGRD FEEKVGAEG+KRTVQR  + KDN RLPEEHARRVGDRILAYCTE FGSTKLAPV+  G +V  L+EGCDRIMNLLRLNFY LD +V + +DR++LTV+ATAPATIWGQQVLAQRRDRPANDFEAK + AYLRACGL GATYSTAFS LD +HTFRL
Sbjct:   44 QEGYVSWLTQKIERARRPPFVKIARARLQRDFAVLLMRASYQVVDELDFVPMDDFQKQFFLFRQREWLGYKENFPRIKQGDLADPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGEKRTVQRSADFKDNARLPEEHARRVGDRILAYCTEAFGSTKLAPVVTQGQTVAELREGCDRIMNLLRLNFYTLDYAVTADLDRKVLTVRATAPATIWGQQVLAQRRDRPANDFEAKVISAYLRACGLEGATYSTAFSSLDAVHTFRL 308
[Close]
BLAST of mRNA_A-nodosum_M_contig12.17.1 vs. uniprot
Match: D8LI96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI96_ECTSI)

HSP 1 Score: 363 bits (932), Expect = 8.760e-125
Identity = 179/267 (67.04%), Postives = 206/267 (77.15%), Query Frame = 1 
Query:    1 MVEEGYLTWLSKRIERSQRPPFIKIPRAKMTRDFAVLLMRSSYQVCDELDFVPMDDFQKRFFLLRQDEWSPYKENFPRIKQGDLTDPDYFDFISFAQYATIAMAMRNGRDIFEEKVGAEGDKRTVQRDPELKDNGRLPEEHARRVGDRILAYCTETFGSTKLAPVIANGLSVGNLQEGCDRIMNLLRLNFYVLDSSVGSQVDRRILTVKATAPATIWGQQVLAQRRDRPANDFEAKTVLAYLRACGLVGATYSTAFSGLDVIHTFRL 801
            ++   Y++WL+++IER++RPPF+KI RA++ RDFAVLLMRSSYQV DELDFVPMDDFQK+FFLLRQ EW  YK+NFPRIKQGDL DPDYFDFISFAQYA++A AMRNGRD FEEK                                   AYCTE FGSTKLAPV+A G +V  L+EGCDRIMNLLRLNFY LD +V + +DR++LTV+ATAPATIWGQQVLAQRRDRPANDFEAK + AYLRACGL GATYSTAFS LD +HTFRL
Sbjct:    2 VLNNRYVSWLTQKIERARRPPFVKIARARLQRDFAVLLMRSSYQVVDELDFVPMDDFQKQFFLLRQGEWLGYKQNFPRIKQGDLADPDYFDFISFAQYASVAEAMRNGRDFFEEK-----------------------------------AYCTEAFGSTKLAPVVAQGQTVAELREGCDRIMNLLRLNFYTLDYAVTADLDRKVLTVRATAPATIWGQQVLAQRRDRPANDFEAKVISAYLRACGLEGATYSTAFSNLDAVHTFRL 233
[Close]
BLAST of mRNA_A-nodosum_M_contig12.17.1 vs. uniprot
Match: A0A836CM91_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM91_9STRA)

HSP 1 Score: 304 bits (779), Expect = 4.670e-100
Identity = 155/268 (57.84%), Postives = 194/268 (72.39%), Query Frame = 1 
Query:   10 EGYLTWLSKRIERSQRPPFIKIPRAKMTRDFAVLLMRSSYQVCDELDFVPMDDFQKRFFLLRQDEWSPYKENFPRIKQGDLTDPDYFDFISFAQYATIAMAMRNGRDIFEEKVGAEGDKRTVQRDPELKDNGRLPEEHARRVGDRILAYCTETFGSTKLA-PVIANGLSVGNLQEGCDRIMNLLRLNFYVLDSSVGSQVDR---RILTVKATAPATIWGQQVLAQRRDRPANDFEAKTVLAYLRACGLVGATYSTAFSGLDVIHTFRL 801
            + YL+W+ +++E S+RPP + IPRA++ RDFAVLLMRSSY V DELD+ PMD FQ+ FFL RQ EW  +++  P I QGDLTDP+YFDFISFAQYATIA  MR+ + +F EKVGA+G+ +TVQR PEL D+  LP EHARRVGDRI  Y  ETF S   A P ++    +  +  G +R+M+  RLNF+ +D+ V +   +    +LTV A APAT+W QQVLAQRRD P NDFEAK V AYLRAC  V  TY+T +SGLDV HTFRL
Sbjct:   67 QSYLSWVGRKLELSRRPPPVMIPRARIQRDFAVLLMRSSYAVADELDYTPMDGFQREFFLFRQGEWQDFQKQHPGILQGDLTDPNYFDFISFAQYATIAAGMRSAQLLFTEKVGADGETQTVQRAPELADDALLPGEHARRVGDRIFTYIMETFASVPEALPQVSVKPPLSIIARGVERVMDKFRLNFFCVDAKVAASTGKDGSAVLTVTARAPATLWSQQVLAQRRDAPTNDFEAKAVAAYLRACQ-VPHTYTTTYSGLDVTHTFRL 333
[Close]
BLAST of mRNA_A-nodosum_M_contig12.17.1 vs. uniprot
Match: A0A7S2V3L1_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3L1_9STRA)

HSP 1 Score: 238 bits (606), Expect = 4.800e-74
Identity = 132/267 (49.44%), Postives = 174/267 (65.17%), Query Frame = 1 
Query:    7 EEGYLTWLSKRIERSQRPPFIKIPRAKMTRDFAVLLMRSSYQVCDELDFVPMDDFQKRFFLLRQDEWSPYKENFPRIKQGDLTDPDYFDFISFAQYATIAMAMRNGR-DIFEEKVGAEGDKRTVQRDPELKDNGRLPEEHARRVGDRILAYC-TETFGSTKLAPVIANGLSVGNLQEGCDRIMNLLRLNFYVLDSSVGSQVDRRILTVKATAPATIWGQQVLAQRRDRPANDFEAKTVLAYLRACGLVGATYSTAFSGLDVIHTFRL 801
            EE Y +WLS++IER  RP  IK+PR ++ RDFAVLLMRSSY V DE+DF+PMD+FQK+FFL R DE+  Y E    + QGDL DP YFDFISFAQYAT++  M+N    +F EK GAEG+   +QR  E  DN  LP  HA+ VGDR+L Y  TE +   KLAP +    SV  L  G  + + L++LN ++LD  V   V  + + V+   PA++W QQVL  ++    NDFEAK + AYLR CG V   Y T+F+  +V+H+F +
Sbjct:   58 EEDYFSWLSQKIERKSRPKAIKLPRLRIDRDFAVLLMRSSYAVADEMDFIPMDEFQKQFFLYRADEYELYLEENRGVTQGDLADPVYFDFISFAQYATLSRFMKNPPGQVFVEKRGAEGEDFVIQRPQEYADNKVLPIVHAQLVGDRMLEYLSTEKY--EKLAPKVPEKPSVETLLSGIVQAVGLMKLNSFMLDFQV-KPVSPKEIEVRLQGPASLWSQQVLRGQQTVLTNDFEAKLICAYLRKCG-VKPVYRTSFTKTEVVHSFSI 320
[Close]
BLAST of mRNA_A-nodosum_M_contig12.17.1 vs. uniprot
Match: A0A7S0ETJ5_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0ETJ5_9EUKA)

HSP 1 Score: 215 bits (547), Expect = 7.120e-66
Identity = 117/260 (45.00%), Postives = 166/260 (63.85%), Query Frame = 1 
Query:   28 LSKRIERSQRPPFIK---IPRAKMTRDFAVLLMRSSYQVCDELDFVPMDDFQKRFFLLRQDEWSPYKENFPRIKQGDLTDPDYFDFISFAQYATIAMAMRNGRDIFEEKVGAEGDKRTVQRDPELKDNGRLPEEHARRVGDRILAYCTETFGSTKLAPVIANGLSVGNLQEGCDRIMNLLRLNFYVLDSSVGSQVDRRILTVKATAPATIWGQQVLAQRRDRPANDFEAKTVLAYLRACGLVGATYSTAFSGLDVIHTFR 798
            LS+ ++ +  P  +K   +PR+K+  DFAVLLMR++Y V DELD+ PMD FQ+  FL RQDEW  Y+E  P ++QG LT+P YFDFISF QYATIA  M+  + IF+E + A G    V R PEL ++  LP  H+ RVG+ +LA+  + +   K+ P + + L+   +++G   I+N+  +N Y+L S +  +     + +   APAT+W Q +L  RRD P NDFEAKTV+AYL+ CGL  AT ST  +G +V HTF 
Sbjct:    8 LSRMLQGAAGPARVKPQVLPRSKLENDFAVLLMRTTYSVADELDYYPMDKFQQDQFLFRQDEWELYREALPGVQQGFLTEPAYFDFISFVQYATIATTMKEPKMIFDELIDANGTSIVVTRPPELANDALLPMRHSERVGEAVLAWMDDRYN--KIRPKVPSVLTAAAVRDGVQAILNIYEINGYMLLSKL--EPTSHGVKITLVAPATLWSQSMLRNRRDLP-NDFEAKTVVAYLKQCGLP-ATVSTNIAGNNVEHTFE 261
[Close]
BLAST of mRNA_A-nodosum_M_contig12.17.1 vs. uniprot
Match: R1CRK3_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CRK3_EMIHU)

HSP 1 Score: 216 bits (550), Expect = 3.670e-65
Identity = 120/251 (47.81%), Postives = 159/251 (63.35%), Query Frame = 1 
Query:   46 RSQRPPFIKIPRAKMTRDFAVLLMRSSYQVCDELDFVPMDDFQKRFFLLRQDEWSPYKENFPRIKQGDLTDPDYFDFISFAQYATIAMAMRNGRDIFEEKVGAEGDKRTVQRDPEL-KDNGRLPEEHARRVGDRILAYCTETFGSTKLAPVIANGLSVGNLQEGCDRIMNLLRLNFYVLDSSVGSQVDRRILTVKATAPATIWGQQVLAQRRDRPANDFEAKTVLAYLRACGLVGATYSTAFSGLDVIHTF 795
            R+  P    +PR ++  DFAVLLMR+SY   DELDF+PMD+FQKR FLLRQD+W  Y++  P +KQGD++DP+YFDF+S+ QYATIA  MR+GR +FEE + A G    V RDP L +DN RLP   + RVGD+IL    E +    LAP +    S   L EG   +  +   N Y+L + +  +   R   + A APAT+W QQVL+ R D   NDFEAK + AYLR C  V A+Y+T + G +V+H F
Sbjct:  111 RAAGPRPRSLPRRRIDIDFAVLLMRTSYATADELDFMPMDEFQKRQFLLRQDDWEGYRQPLPPVKQGDISDPNYFDFMSYCQYATIAAGMRDGRVVFEELIDANGTSVVVARDPALPRDNARLPALLSLRVGDKILDAIAERYPG--LAPTVELRPSRAALLEGVKALAQVFEYNNYLLSARL--EPSERGFQLSAIAPATVWSQQVLSLRGDL-VNDFEAKAIAAYLRRCA-VDASYTTRYEGSEVVHIF 355
[Close]
BLAST of mRNA_A-nodosum_M_contig12.17.1 vs. uniprot
Match: R1DSH8_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DSH8_EMIHU)

HSP 1 Score: 216 bits (550), Expect = 1.620e-64
Identity = 120/251 (47.81%), Postives = 159/251 (63.35%), Query Frame = 1 
Query:   46 RSQRPPFIKIPRAKMTRDFAVLLMRSSYQVCDELDFVPMDDFQKRFFLLRQDEWSPYKENFPRIKQGDLTDPDYFDFISFAQYATIAMAMRNGRDIFEEKVGAEGDKRTVQRDPEL-KDNGRLPEEHARRVGDRILAYCTETFGSTKLAPVIANGLSVGNLQEGCDRIMNLLRLNFYVLDSSVGSQVDRRILTVKATAPATIWGQQVLAQRRDRPANDFEAKTVLAYLRACGLVGATYSTAFSGLDVIHTF 795
            R+  P    +PR ++  DFAVLLMR+SY   DELDF+PMD+FQKR FLLRQD+W  Y++  P +KQGD++DP+YFDF+S+ QYATIA  MR+GR +FEE + A G    V RDP L +DN RLP   + RVGD+IL    E +    LAP +    S   L EG   +  +   N Y+L + +  +   R   + A APAT+W QQVL+ R D   NDFEAK + AYLR C  V A+Y+T + G +V+H F
Sbjct:  166 RAAGPRPRSLPRRRIDIDFAVLLMRTSYATADELDFMPMDEFQKRQFLLRQDDWEGYRQPLPPVKQGDISDPNYFDFMSYCQYATIAAGMRDGRVVFEELIDANGTSVVVARDPALPRDNARLPALLSLRVGDKILDAIAERYPG--LAPTVELRPSRAALLEGVKALAQVFEYNNYLLSARL--EPSERGFQLSAIAPATVWSQQVLSLRGDL-VNDFEAKAIAAYLRRCA-VDASYTTRYEGSEVVHIF 410
[Close]
BLAST of mRNA_A-nodosum_M_contig12.17.1 vs. uniprot
Match: A0A0M0K8A7_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K8A7_9EUKA)

HSP 1 Score: 219 bits (557), Expect = 6.130e-63
Identity = 131/260 (50.38%), Postives = 153/260 (58.85%), Query Frame = 1 
Query:   40 IERSQRPPFIKIPRAKMTRDFAVLLMRSSYQVCDELDFVPMDDFQKRFFLLRQDEWSPYKENFPRIKQGDLTDPDYFDFISFAQYATIAMAMRNGRDIFEEKVGAEGDKRTVQRDPELKD-NGRLPEEHARRVGDRILAYCTETFGSTKLAPVIANGLSV----GNLQEGCDRIMNLLRLNFYVLDSSVGSQVDRRILTVKATAPATIWGQQVLAQRRDRPANDFEAKTVLAYLRACGLVGATYSTAFS--GLDVIHTFR 798
            IE S RP    +PR ++ +DFAVLLMR+SY V DELDF+PMD+FQK  FL RQ EW  Y+E  P + QGDLTDP YFDFISF QYA+IA  MR GR IFEE + A G    V R P L   N  LPE H+ RVGDR+L +  E +    L PVI    S       L EGC R+ ++  LN + L S+V        +     APAT+WG QVL  R D P NDFE   VLAYLR CG V AT  T F   G  V H  R
Sbjct:  438 IEASMRPKIRALPRRRLEQDFAVLLMRTSYAVADELDFMPMDEFQKEQFLFRQREWDTYREKLP-VMQGDLTDPAYFDFISFCQYASIASGMRRGRMIFEELIDANGTSVIVSRAPTLPQRNELLPEAHSIRVGDRLLNWMLERYDGV-LRPVIPPTSSALPRAPVLVEGCQRVADIFTLNEFALTSTVTPLASGAGVAWTLVAPATLWGAQVLQLRGDEPKNDFEVMAVLAYLRRCG-VPATSITRFEKGGTQVTHEIR 694
[Close]
BLAST of mRNA_A-nodosum_M_contig12.17.1 vs. uniprot
Match: A0A0G4F5D5_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F5D5_VITBC)

HSP 1 Score: 197 bits (500), Expect = 6.080e-58
Identity = 120/272 (44.12%), Postives = 159/272 (58.46%), Query Frame = 1 
Query:   28 LSKRIERSQRPPFIKIPRAKMTRDFAVLLMRSSYQVCDELDFVPMDDFQKRFFLLRQDEWSPYKENFPR--IKQGDLTDPDYFDFISFAQYATIAMAMRNGRDIFEEKVGAEGDKRTVQRDPELKDNGRLPEEHARRVGDRILAYCTETFG---STKLAPVI------ANGLSVGNLQEGCDRIMNLLRLNFYVLDSSV---GSQVDRRI-LTVKATAPATIWGQQVLAQRRDRPANDFEAKTVLAYLRACGLVGATYSTAFSG-LDVIHTF 795
            L +  +  + P  +KIPR ++ +DFAV +MR SY V DELDFVPM+DFQK FFL RQ+EW  Y+E      I QGDL D +YFDFISFAQY T+   M +G+ +F EK GA G+++ V+R   L DN  LP EH+RRVGDR+L +  + F    S K   +I      +    V N+Q+    I NL+ +  Y         G + D +    +    PAT+WGQQVL+ R     ND+EAK  +AY R CG   ATY T+F G   V+HTF
Sbjct:   54 LKQAADELRSPAPVKIPRTRINQDFAVQMMRQSYNVADELDFVPMNDFQKDFFLYRQNEWERYRERLKPMPITQGDLADANYFDFISFAQYLTLYTEMCSGQQLFVEKTGATGEEQLVRRPAFLADNSLLPSEHSRRVGDRLLDFLIDRFNTDESGKTCCIIRAAARPSPSFVVSNVQQ----IANLMTILGYAEKGEAKLTGERDDGKFSFEMMLVLPATLWGQQVLSIRGAGLPNDYEAKIAMAYTRRCGY-RATYRTSFEGGSSVVHTF 320
[Close]
BLAST of mRNA_A-nodosum_M_contig12.17.1 vs. uniprot
Match: A0A4D9D7Y6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7Y6_9STRA)

HSP 1 Score: 194 bits (493), Expect = 3.300e-57
Identity = 123/284 (43.31%), Postives = 155/284 (54.58%), Query Frame = 1 
Query:   16 YLTWLSKRIERSQRPPFIKIPRAKMTRDFAVLLMRSSYQVCDELDFVPMDDFQKRFFLLRQDEWSPYKENFP--RIKQGDLTDPDYFDFISFAQYATIAMAMRNGRDIFEEKVGAEGDKRTVQR--DPEL-KDNGRLPEEHARRVGDRILAYCTETFGSTKLAPVIAN-------GLSVGNLQEGCDRIMNLLRLNFYVLDSSVGSQVDRR------------ILTVKATAPATIWGQQVLAQRRDRPANDFEAKTVLAYLRACGLVGATYSTAFSGLDVIHTF 795
            Y  WL ++ E   RP   +  R K+ RD AVLLMRSSY+V DELDFVPM+DFQK FF  RQ EW  Y   FP   ++QG+LT P YFDFISFAQY T+   MR+G+  F E V AEG+KR V+R  DP L +DN  LP EH+RRVGDRIL    E       AP ++         + V  + E   RI++L     +     V +  ++              L V + APA +W  Q L  R +   NDFE K V AYL+  G    TY+    G DV+HTF
Sbjct:   26 YFEWLGRQAELKLRPQPYQGLRLKIERDLAVLLMRSSYEVADELDFVPMNDFQKDFFTFRQAEWEDYVGAFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKLAFVELVSAEGEKRVVRRSDDPSLPQDNSLLPAEHSRRVGDRILQRLLEA--PEVYAPRLSGRGRGGGGDIGVEEVVEDVKRIVDLFTAKQFNQGGEVKTLAEKEGARKGGAAWQGMKLKVTSRAPANLWSLQSLMFRNEPLLNDFEGKAVRAYLQGVGKKEETYAVQVQGNDVVHTF 307
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig12.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJT5_9PHAE7.450e-15378.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI96_ECTSI8.760e-12567.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CM91_9STRA4.670e-10057.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V3L1_9STRA4.800e-7449.44Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A7S0ETJ5_9EUKA7.120e-6645.00Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
R1CRK3_EMIHU3.670e-6547.81Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
R1DSH8_EMIHU1.620e-6447.81Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A0M0K8A7_9EUKA6.130e-6350.38Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A0G4F5D5_VITBC6.080e-5844.12Uncharacterized protein n=3 Tax=Vitrella brassicaf... [more]
A0A4D9D7Y6_9STRA3.300e-5743.31Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig12contigA-nodosum_M_contig12:146951..165030 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LI96
Model size804
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.44e-125
EggNOG OGsCOG0220@1|root,2S59I@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-14_003680.1
DescriptiontRNA (guanine-N7-)-methyltransferase activity
Cds size804
COG categoryJ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866617.4257994-CDS-A-nodosum_M_contig12:146950..1470821680866617.4257994-CDS-A-nodosum_M_contig12:146950..147082Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig12 146951..147082 +
1680866617.4360664-CDS-A-nodosum_M_contig12:148380..1484811680866617.4360664-CDS-A-nodosum_M_contig12:148380..148481Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig12 148381..148481 +
1680866617.4455194-CDS-A-nodosum_M_contig12:163469..1636861680866617.4455194-CDS-A-nodosum_M_contig12:163469..163686Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig12 163470..163686 +
1680866617.4554865-CDS-A-nodosum_M_contig12:163959..1641301680866617.4554865-CDS-A-nodosum_M_contig12:163959..164130Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig12 163960..164130 +
1680866617.4724352-CDS-A-nodosum_M_contig12:164847..1650301680866617.4724352-CDS-A-nodosum_M_contig12:164847..165030Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig12 164848..165030 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig12.17.1prot_A-nodosum_M_contig12.17.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig12 146951..165030 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig12.17.1

>prot_A-nodosum_M_contig12.17.1 ID=prot_A-nodosum_M_contig12.17.1|Name=mRNA_A-nodosum_M_contig12.17.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=268bp
MVEEGYLTWLSKRIERSQRPPFIKIPRAKMTRDFAVLLMRSSYQVCDELD
FVPMDDFQKRFFLLRQDEWSPYKENFPRIKQGDLTDPDYFDFISFAQYAT
IAMAMRNGRDIFEEKVGAEGDKRTVQRDPELKDNGRLPEEHARRVGDRIL
AYCTETFGSTKLAPVIANGLSVGNLQEGCDRIMNLLRLNFYVLDSSVGSQ
VDRRILTVKATAPATIWGQQVLAQRRDRPANDFEAKTVLAYLRACGLVGA
TYSTAFSGLDVIHTFRL*
back to top

mRNA from alignment at A-nodosum_M_contig12:146951..165030+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig12.17.1 ID=mRNA_A-nodosum_M_contig12.17.1|Name=mRNA_A-nodosum_M_contig12.17.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=18080bp|location=Sequence derived from alignment at A-nodosum_M_contig12:146951..165030+ (Ascophyllum nodosum dioecious)
ATGGTGGAAGAGGGATACCTGACTTGGCTGTCGAAGCGAATCGAGCGCTC
TCAGAGGCCGCCGTTCATCAAGATTCCCAGGGCGAAGATGACACGAGACT
TCGCTGTGCTCCTCATGCGCAGTTCTTACCAGGTGAAAACCTAGCTGATG
AATACCGGTGTGCGTTTGATGAGTTGTGAATGTTGGTGTTGCCGTCGGAG
CCTAAATCTCAACTTTGCAACGTTTAACTGGTATTACGTTCGTGTACCTG
AACACGTCGCGTCGCCTCAAAATCCCCTCCTGTTACAAGGACAAGGATTT
TGTGAGCCCGAATCTTGACAGGATGATAAAGTCAATTTCAAACATAAGGT
AAGAGCGCTGAATTTGCATCGCGTAAGGAAAATGTAGGCAAGCCACCGGC
AAGCAGGATGGCAATGACGCTGTCATGGATGGGATCGGAAACCTGGCAGC
ACGTAGAGGCCCATCGGTCGTAATAGTAATAGCAAGTGAGATGCAAGCGA
ACCAAAAACCACTTTAATATTAACATGAAAACTCCTACGCAGTACAGACA
GCTGTAGGAGATCGCAACAACCGTAGTTCCCATCTCGAACGCATCTAAAC
CTCCTGAGCATTCACTTCATGGCGGAAATATCCGCTTGACTGCACCAATT
TGTATAGTGCTAAGCCGATGAGGTGTGCAGTACCACCCACCAGGAAATTA
TGGCCTCCCCTCTTTGTTCTCTCGGCAACAACCCATCAAGGTGATAGATT
GCTGAAGGTGGTGCTCCAATCTTGTCAAGATAAAAAGAACCGAGAAAGAG
AGTGTTCTGACAACGATCCGTTGCGTCCCTACTCACATTCTCTCATTAAC
ATGTACGAGTTGCACGGAAGTAACCACCCAAATCATCCTTGAATTCTACC
GGTTACCAGTACATGATTTTCAACATGCCCACTTCATATCAATAGTTGGT
GTGGGAAAGAGAAGGCGCATATTAATTGGTCCATGGTGACCTGCCTAGGC
AGCACTCGTTCGGAACTACCTTGAGGTTTACTGGCCCTGTGCTGGCGGAC
TCTCGGCAGTGAACGCCATCGGTACGCAATTGCGTGACCCGATAAACTCG
GGACTGACCCGATGGCGTATGGCGGTTTAAATAAATAAATGGACGCCGCC
GCTGAACATTCTCAGGCGCGAACGCGGACGGGGAAATATTCATTTTCCCT
GTTCAGCTGACCACGAGCAGCATTGGCAGCCTTACCCGGTTGATCCATGC
CCTTCCTATATGTGTGACTATACATACATACCAGTACTCCGGAGTAAATG
TTTACTACTGTAGCTATTGATCCTAATTTTTATTTATGATATACTGTAGA
TGTTATTAGTACGAAACATTCGCCAAGCCAACTGAGTTCTACCGTCATGC
GATGCCCTCGAATGTCTTCGAGTTTCATAGGTATGTGACGAACTGGACTT
CGTCCCGATGGATGATTTCCAGAAGCGATTCTTTCTACTTCGACAGGACG
AGTGGTCCCCTTACAAGGAGAACTTCCCTCGGTGGGTAGAGCCTATATCG
GTACCAGGCATTAATAGGAGACAGGTAGCTCGTACCGCCGACACCTTCCG
GTTAAGAAGCGAATGTTGTTTCCAGGCTTTCGAGGTAAAGTAAGTCTTCT
TGGCAATCAAGGTAATGGCGTCATACTGATCAGGCGTACAGCTGGCGCCA
TTGCACATAGGTTAGTTTAAAACGCGGACCAATTTTTTAAATGTGAACCT
TCGAAACGTAGAAATTTCCGAACCCGGCAAAAAATTACTGTATGCATGGC
TCGAAATTTCGAAACCTCGAAATGGAGCGCTATCATCGCAGAACGTCCTT
CTGCCCAGGCGCACTAAGGGTGGTAGACTTGTTTTCTGTGTCTGTGATTT
CTCGTGTCGGTGATTTCTGTATCCTCAGATTTTACCTCTGTATTTATCGA
TACGGCTCCTCCCTCAGCGTGTACAGCACGCTTCGGCGTATCCTGGCAGC
AGTTTCTCACACAATAAGTTTCACGTGTTGTATTCTTTATTAGTTTCTTC
GCCCACAAGCAAGAGCACAGAAGACAATCTGAAGTTTCCCTCACAACACA
GCTTAACTGGTAGCCCCACTATAGTCTACTTCAAGCTTGCCCAAGTCTCA
CGCAGGAAAGGACACAACTATGCAGACTCTTAGGCTCACTCACAGGCTGG
ATCTCAGGCTTGTCGGTGTCTTGGGTGGCAGAAACGCGGAGTGAACGAGA
TAGGCGAATTATCACCGTCAAGCTCAGCAACAAAACAAAACAATTTCTAT
CCTGTACTAATTGTTTAGTTTTATTCCACCATGACCCCAAACAAACGCCA
AGACCCCCAAACAATTTCAGGATCGTCTGAACCAATAACAAAATTGTTTC
TCCGCTGTACTTCCATGGCCCTATTTCCATACATGATTCGGTAGAGTACT
AATGATTCGCATCTCGACACCCCCACTTACTCTATCGGATCATGTGAGCC
TTCATTTTTATCATCATAAATTCATGCGCAGCGCTTACTTGTATACCCTC
GAAACCTTAAACAAATCACACTACATTTAGGATAAACTTCGCGTGCTTGT
AAAACTTTTGCATGTCTAGCGGCTTGGTGAGCAAGTTCGCGTGCTGATCT
TCCGACCTTACATACGCCACTCTAATCTTTCGCGCGTCAGACGCGTCCCT
CACCAGATGGTGTTTTACATCAATGTGCTTAGTCCTACGACTAGCATGCT
TGTTTGTGGCCAGCTTGATGGCCCCCTCATTGTCTTCGAATACTTTCACT
GCACCGACCCTCATCGACGGTTCCATGAACTCCTGAACCTGTCTCAAAAA
TATAACTTCCTTTACCACCTCTGATAAAGCAACGTACTATGCCTCCGAGG
TACACGATGCTGTCACTTCTTGCATCCTTGAGTGCCAGCTGATCGCCCCC
TTCGCCAGCATCAACACCGCACCCGAAACCGATCGTCTCGTATCCAGGCA
GGCTCCAAAATCCGAGTCCGTGTATGCTTCCATGCAGAGTCCACAGCCCT
GTCCACCGTACGTAATCCCCCATTCTTTTGTGTGAAGGAGATACTGCAAG
ATCTCCATCACTGCCTTCTTATGCGCCGGCCCAGAGTTTTCGCAGGACCT
GGCCACAGCGCGTACGGCACACGCAATGTCCGGCCGTGTCATCGTCGCCG
TCAACATAAGCGCCCCCACTGCCTCCCGGTACGGGAACTTCCTCATTTCC
TCCTTCTCCTCTGGGTTCCGCGGTTCGTCCGCCTTTGAGAGCGTTGGCAC
CCCCGACGCAGCCGGTATTTTGGTTGCCTTCTTGACGTCAAACCTTTCTA
CCATCGACTCCACGGTTCCTTGTGATGTGACAGCCCGTTTAGTACCCGGC
GTCGCCCATGTCCTTCAATTTAAACTTCTGTCCTCAGCCGCGAATCTATC
CATCGTCGCTTGATCTTTGGCGTGGGCAAGAATGTCGTCTACGTGCACGA
CCACCACCATCTCCGCCTCACCGTCAACGACCTTGCGGAACACACACGGA
TCCGCTTTTGCTTGTTCGAATCCAATCGCCGTCATGTCGTCACATAACTT
GTTGTTCCAGCACCTCCCCGCCTGTACGAGTCCGTAAATGGCCTTGTTCA
GCCGTCCCACTGCCCCCGGAAACTCCCGGATTTCCTCGTGGATCTCAATG
TATATTTCTTCGTCAATATCCGCCTTCAAAAATGCCTGCTCCGCGTCGAA
ATGGCGCAGCACTCCGTCCTTGGCCGCTGCCATCGCCAAAAGCATCCTTA
TTGACGCGGTCGCTGGCGTGGGCTAGTACTCTTCCGTGTAGTGTACACCT
TCCACCTGCCGGAACCCTTGTGCGACAAGTCGGCACTTGTACTTCTCGAC
CTTGCCGTCCTTTCCGATTTTTCGCTTGTAGAGCATTTTTGTGCCAACCA
CGAGCTTACCCTTCGACCGAGCCACCTGCTTATAAACGCGGTTCTCGACC
ATTCCAAGCATCTCAGTCTCCTCTGCCTTCCGCCATTCGTCCCATTCCGT
CGCCTGCCGCCGATTTCTCGGTTTCGGTATATCCAGCGTCGCCTGCATAG
CCATCTGCCCCCCGTCGTCGCACGCCAACGCATCCTCCACGCCGTTTTCC
TCCTAGGCTTCGATCGCCGGCAAGAAACAATGAAACGCTTCTCCCTCCAC
ACCGGTGTGGGGTCTTCGACTCCTCGTACGTGATGATAATATGGGCGGGA
TATTGCCATCGATGGTGAGCTTACGCAGCGCGGGTAAGGCCGGTCCCCCC
AAATTTTCCGACCCCGATGCAGGTCCCGCTTCCCCCTCCTTTTGTTGCTG
CTCCCTCTCGTGTTCCGAAAGAGCCTCCTGCGTCTCCTCCTCGAGTTTCG
AGAACGTCCTCTGCGTCTCCCCTTCGTGTTCTGAAAACGCCTCCTGCGTC
TCGTGCTCGTGCAGCGTCAACTGCTGTTCCTGTCCCAGCTCCTGAACATT
GAGCTGCGGAGTCCCTCTCTCGACAATGGTTCCATCTTCCGCCGACTTCA
TGCCGCGGTCGTCACTGCCGGTGCCATCACCCCCGGTCTTTTTATGCTCA
TCGACCCACTGCACGGCCTGTCGCTTCGCCTTAGCCTGGAAGCATACCTC
ACACGCCCCCCACTGGCCCGTCGTCTCGATCCCCATCATCTCGGCCGTCT
TTCTCGTTATGTCCTTGCTCGGGTGCGCAAGCATGCGATGGACCTCCATA
ACGTCACGGGATACCCCCGCTCTCATCGCCAGCGCCGTTCCCGAAGCGAT
CCTCACCAATCCGTTCTCCGTCAAATTTGCTCCTAGCGCCACCTCCTGCC
TCGGGATCCGTCTCGCGCCTGTAGCTGAAAACAGTCCCTTACGGGGGCAG
AATTTGAAAATAACCGATTCCTCCCCCGGGAACCCCAAAACGGCTTAATT
CCTATAGTAGATTAACGGTTTCCCCCATTGCTCCACTGCTTTGATGGTAG
ACAGCAGGTTCCGAGAGAGTCCCGGCACATACGCAACATCGTCCATCTTC
ACCATCTTGGTTGTGTGACCCGGTTGGTCCAGATCCACCTCGATTCTCCC
GAACCCGTCCACCGGTAGAATATTACCGTCGGCGATCTCAACGTTCGTCC
CCGGCGACGCCTTCTTATAAGCAGACATTCCGGCGCGGGTGTGCGACATG
TGGAATGTGGCGCCGGAATCTGATTCCCACTCTTCCTTCCTATCGCCACG
AGCTGCTCCCACCATTGTCGCCACCGTTTCCACCTCAGGAACCGCCAGCA
CAATCAGTTTTGCCAGCATTGCGCGTTTTTCAGCTTCGCGCTCCTCACAG
TCTCGCGTCCGGTGCTTAAGGCTTTTGCACACACCACAGTGCCTGTGCGC
AAAGTGCTCCTCACTCCCGCAGATGTAGCACCTACCGCTGCCACCGCCCT
CCTTCTTGTCGTCGGCAGGTCCGTATTTTTCACTCTTTTTCGCGCTCCTG
CAGTCTACAGCGCGGTGACCTTTCTTTCCGCATTTGAAGCAGTTACCATC
AAATTTGTGGTGGAGTCTCCTGTTCTTCCCCTTCCCGCGATTCGCCGTGA
CGGTGCCCTTCGATGCCGACAATGCCTTCGAGTCCTGTTGCTTCCTGAGA
AGTCTGTTGCTCTGATTCCCTACAACACGCTCAATCTCAGCCCTGTTAAG
ACCAGCAGGGTTGTTCTTTAGCATGCGGCACTCCATCTCAAAATACGCAG
ACAGACCAGACACAATAATCACGCACTTTCTCAATTCGGTTACGGATTTG
TCACCCAAATGGTGAAGGTCTGCTGCTAGCCTGTCAATTTCCATCATAAA
CTTAAATGGGTCACAACCTGGTTCCATCGTTTTCCCGTTGATTTCATGGG
ATAGCCGGAGTTACCTATGCTCTATAGTGCGATTCGAGATTTCTCCACGC
GTCGTTTGGTGCGTTGCTGCGTTGCACGATTTCGAGTGCCATTCCACTGT
TGTTGTTATTGTTTTCTCACATCAACTGATCCGATACGAATCCAGCCGTG
GTCACAAGATAAACGGAACCAAACCAAATCAAACCGGGAATCTGAGATAA
GCATGGAAAGCAGACAGAAAAGGACGGACAAGGAAGTAGCCAACAAAGGA
CATCGTCGCGATAAAATAGAAAACATAAACAAAAACACACAGACAGTAGA
ATCAAACTAGAGCCAACCGCATAAAAACTCAGGGAAGGTAGCCCTATAAG
CGGTGGGATACAACCCAGGCATGAAGACAAGGGCAAGGGCAACGGATGCA
ACACACAGCGAAATAAAAACACAGATGGAGAGAAGGAGACAACAATCAAG
GGAAATAAAAGAATGAGGTATACAGGCACAAGGAGCATCGCGATGGGTTA
ACTACCCAAAAATGAAAGAGGAGCAGAACCCATACCGGGCTCACCTATAT
CGCAGGAAGAAGACAAATTAAAACAAAACACAAAAAAAATGACACAAAGT
CGCACACGTAGTTGTTTATCTCACATTATTAACTGGTCCGCTACGAATCC
AGCTGTGGCCACAAGATAGAGGAAGTTACACCAAAACAAATTGGGGACGA
ACACGGTCGAAAAGAAAAGAAAAGAAAAGAAAGCAGACAGAAGGAAGCGG
GCGTGGAAGTAGCCTGCAGAGGACATCATCGCCAGGGAGGGATTCAGGAG
GGGAAAAACCAAGGAACAAAAACAAAACAAACCAGGGCAACCACATATAA
TATGCGTAGGGCAAGAAAGGCAACCATATACATATATAAATGGTGCAAGA
CAGCCCAGATAGGAAGACAAAGCAAGAACAAGGACAACGGAATAAAATGG
AGGAGGAGGGAAAGGGGTACAGGAATCAAATCAAATAAGGAAAGAGGTAA
ACAGCCACAGGGAGGGGCATCACGAGTACCGGGCTCCCCTACGGTATATC
ACAGGGAGAAAAACACCTAGAAACAACAGCAACGAGGCAAAACAAAACAA
AACAAAGCAAAACTAAAATCGCACACGTAATTACTGTACAACTTCACTAA
CCTCGCGCTGGCGTTGCACGTTGGATTGACGAAGGTCCGCGCGTCGCCAG
GCGCTGTCGAGTGATTCCGCTCCCCTCTCGACCCCCCGGTGCCACTTGCC
CATGTTCTTCGCAGCAGTCATCCAATCCCGTCCATCCTTGACAACAACTT
CGAATGCGACCCACTTCCGTCCTTTACCTTTGCGCGGGACCGCCCCGAAG
GCCTCGAGATTTTTCTGGAGGCAGCCCACCCACGACGTCGCCGGTCGACC
TCCTCGCTTGGATCCTTGCACCGCCAGCCGCCCAAATATGACTCGCTTTG
AAAGCCTTGAGTCGCCTTGCCATACAAGGGCCCCGACGAACCCAAGTTGG
CGCTTCCGAATTGTCGTTTCGATGCGTTCGGAACCGGTCCTCTCGAGAAC
CTCTCTATACGATAGGGGTTTATACCCGATGCGGTCCTTGCGCCGAAATC
CGATAATGCGCAAGAGTAGCTTGTGGTGGGCAGTACGTAGGCTGCTAAAG
TCCTGGGAGCGCATAGTCCACGTGGCACATCCGTACAGCATAGCTTCCAT
TACCTCCGCTTTGAGCAGCCTGATTTTGAGCGACAGTCGGGCATTCCGGC
GGTCGTACAGTTGGGAACTGTATTTCCTGACACTCGCCCAAGCGGCGCCG
ATACGACGCTTAATCTCCATGTCAAGGTCCGCGCTCTCGCTGATAGCACC
ACCAAGGTACACAAACTCGGTCGTCTGTTTATACCGTTGCCCTGCCGCCT
CAATTCGCAGCGCGTTCGACGTTGTGTGGGGATGGGACCACAGGTGCATG
GCCTCGGTCTTTTTTTCTGACACTGTCAGTCCGAATTCCTGGCATGTGAC
AACTATAACGCCCATCATCCTAGTGAGCTCACGAGGCATGTCGACACCAC
TCCCGCATCATCTGCATACAGCATCCCCCACACCGCTCGCCGGACCATTT
CCAACGTCCCCTCCTTCCTGGGTCTGCCATCCTCACCCTTCGGCGCATCA
TCGAGGTACACCAAGTCCGACACGATCAGCGGGTCCTCCGCGAACCTCTG
CAGGACCACTATGATGACCGCCGCAAAAAATATATTGAACAATAGCGGCG
ACAACACACATCCTTGCCGGAGCCCCTGGCAAACATTAAACTACGCCGAG
AAATCTCCATCATCCAACTGTACGCGAGCCCTCATACCATCGTGAGACAT
GCGGATGACCTTGATCATCCGAGGCGGGACTCCAAAACGGGCAAGTATTT
CCCATAATAGCACACGATCGACCGAGTCGTATGCTTTTGCCAGATCGATG
AAGCAAATCTCTAGGGAAGTGTTGCTTGTCCGTCCCAGTTCCTGAAGTCT
GCGCACGACGAACATCATATCGGTTGTCGAGCGTTGGGGTCGGAAACCGC
ACTGCTCTTCGGGGAGGATTCCAGCTTCTTCGCAGAAGTCGCCAAGTCGG
TTGGCCACGATTTTGAGGAGAACCTTGCCAGCATGCGCCACCAGAGAGAG
GCCCCTGTAGTTGCTACATTCGGTCCGATCCTTCTTCTTGTGTAGAACTT
TTATGGTGGCATCTTTCCACTCCTGCGGTACTTCCCCCGTCATCCATACA
GCCACGATGATGTCGTGGAATGCGAGCAAGATTCCGTGGGAACTGTCGGA
AAGCCCAAGTTTGAGCAGCTCCGCCGGCAGCTCATCCGGTCCCATAGCCT
TGCCATTGGCAAGGCTATGGCTGCAGCTGTTGATCAGTGTCATCCAGGCC
ACATGCACATTTCGCAATCTCACGGGGTCCACGTTACTGCTGTCAAAAAC
ATCAGCCCCAACGCTCAGCCCATCCCCTTCGGCTGCAGTCAGTTCATCTT
CAAAGCCACTCGCCCTAGCCTGGTACAAGACTCTCTGACTCCACGTCAAC
CAGCTTGCTGTACTATCACCCTCGAATGCTGGTACATCGAATTTGATGGA
TGTTTGAAACTGTTGTGCAGCAGTGGTGTTTTGCGTCACGTGATTTGCTG
CAGTAGCTGATGGTGGGATGTTTCCTATCTGTTGCATCTAGTGGGTCAAT
GCCTGACTTACTGCGTTGCTTACAATCTGCGCAATCTGTATTTGCGTCAA
TTGTACCACCTGGGCCATCATCTGCCCCAGGAATTTCATACCCTACTAGA
GAGTCTACCTCTCCCTTGTCACCCTGAAAAGACAGCGCTTCTACTGCTGC
CTCTGTCTACGTACAGAGATTAAACCTAGGAACACAAATTTCAAGCTGCC
TCCGCGGTGACAACTTGAGCCCGCTCTTAAGGCTAATGCCGTTATAACCT
GTCTGTGATTTCTCGTGATTTCTGTATCCTCAGATTTTACCTCTGTATTT
ATCGATACGGCTCCTCCCGCAGCGTGTACAGCACGCTTCGGCGTATCCCG
GCAGCAGTGTCTCACAATGAGTTACACTTGTTGTATTCTTTATTAGTTTC
TTCACCCACAAACAAGACCACAAAAGGCAATCTGAAGTTTCCCTCACAAC
ACAGCTCAACTGGTAGCCCCACTATAGCCTACTTCAAGCTTGCCCAACTC
TCACGCAGGAAAGGACACAACTATGCAGACTCTCAGGCTCACTCTTCACA
GGCTGGATCTCAGGCTTGTCGGTGTCTTGGTTGGCAGAAACGCGGAGTGA
ACGAGATAGGCGAAGCATCACCGTCAAGCTCAGCAGCAAAACAAAACAAT
TTCTACCCTGTACTAACTGTTTAGTTTTTTTCCACCACGACCCCAAACAA
ACGCCAAGGCCCCCAAACAATTTCAGTATTGTCTGAACCAACAACAAAAT
TGTTTCTCTGCTGTACTACCATGGCCCTATTTCCATACATGATTCGGTAG
AGTACTAAAGATTCGCATCTCGACATTCTGCGTAGGGGCAGAGGATGAGT
GGCATAGACTCGCTTGGACTCGATAGTAATTTGCGTTACTTCATTGATTG
ATTGATTGAATGAGTTCTCACAATTATAACCGTTACTTTCAACATGCTCA
CTTCGTACCAATAGTGGGTGTGGGAAAGAGAGGCGCATATTACTTGGTCC
ATGGTGACCTGCCAAGGCAGCACTCATTCATTACTACCTTGAGGTTTACT
GGCCCTGTGCCGGCGGACTCTCGGCAGTGAACGCCATCAGTACGCAATTA
CGTGACCCGACAAATTCGGGACTGGCCCGATGGCGTATGGCGGTTTAAAT
AAATGAATCGACGCCGCCGCGGAACTCAGGAGGAATCCCGTAAGTAAGCA
CCAGATTCAGCCTGAGTATGGAGATGAGCAGGCTGACGCGGAACGAGACT
GCCGAACCCGTCTCGCGAGACCAAATTCTCAGGCGCGGACGCGGACAGGG
AAAGATTCATTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCAACCTT
ACTCGTTTGATCCATGCTCTTGCTACATGTGTGACCATACATAAGCTGAA
GGCAAAAATGCAAAAATCCAACCCGTGGTAACGAAGTAGAAAAACACCAT
CCGGAAGAAAAAAACGTATGACGTACTCTCCATACAATGAGAGAACAGTA
ATGGTACAAAAATAGTCGGAAAAAGCGATGTCTCCAACGAAACAACAACA
AAAATAAAAACAACAACAACAAAAATAAAAAAAGCCGAAAAAAGGACGCG
GACAGTTGTTAGGTAACTGCGTGTGGCTGTCGGGGCGCGTGCATATCGTA
GAACGAAGAACGACTGAGCGAATGGTCGCGGCTTCAGTGAAAGCAAAAAA
GGCGAAAACGAACCAAAACCAAAACAAACGTAACATCAGAGAAAGACAAC
ATGACATCCGCCCGGAGGATACAAGTTTGCGCCATTTGTGGCTAATCAAC
TATGGCGAGCGAACCAGCACGAGCCCGCTTGCTTTGGGCTATCCTCTCCT
TGGTCCTTCCCGTCACGTTCAGGCATACTACTGCATGTCGTAGTCCAACC
GACTTTCTCGGCAGCGATCCATTTCGCCATGAAACGTTCCGCCGTTCTGC
GCCATTCCCCCTCGTCCTGGGCTGCAGTCGTCCACTGATCGGCGTTTATG
CCGAAAGCTCGGAGGTCGTCCAGGAAACACCCCATCCACTCTTTTTCCTG
GCCCCCCACGCAGCCCGCGCCCCCCACCATTTCTCCGAACATCACGCACT
TCGGCAGTCTCGTATCCTCCATGCGCGCCACAAATCCCGCAAACAAGATC
CGCCTCCTGCCGTAAAGTCGCCTCGATGCTCTCACTTCCCGTCTTGATAA
GCGCGTCCAGATAGGAAATCGGGTGGTCGGCGCGTTTGTGCTTTCGCCAA
CCGATGCAGCGAGCCAGGAAGCTGTGGTGGGCTTGGCGCAGCATGTCGGA
GTGGCACGCGTGCGGGCTACACGTGACGCAGCCTTACAGCATTGTCTCGA
GTACCTCGGCTCTTAGCATCCGTATTTTGAGCTTGAGGGGAGCGCTCAGT
CGGTCGTATAGTTCGAGGGTCTACTTCCGGAAGCTGCACCATGCGTTGCG
TATGCGCCGACTGACCTCGATGGACAGGTCAGCATTGTGGTTGATGTTCC
CCCCGAGGTATACGAACTCGTTCGTTTGGTTGTACACCTGGCCGGCTGCC
TCTACGCTGATTGTGGCGGTGGACTCCGGCATTCCTTTCGTCCGTAAACA
CATGATCTTAGTTTTGACCTCCGATACGGTGAGGCCAAACACCGCGTACA
CGACCACGATCACCCCCGTCATATTCCTCAGCTGCTCGGGCGATTGCGAA
ACGACCCCGGCATCGTCAGCGTAAAGCATGCCCCAAGGCAGCGTCGACAG
GACTGGCTCTCCTGCAGTTGCTTCCCCCCGCCCCCTCGCCCCTCCGGGCC
ATTTTTCTTCCTCAGGTGCACCAAATCGTCCATGGTGCCGTTGTCCGTCT
TGAAACGCGTGTAGGTCACGTTTATAACCGCCTCGAAGAAGATGTTGAAC
AGGAGGGGCGCGAGCACGCACCCTTGCCGAAGGCCCTGTTCCACAGCGAA
CCACGTCGAGCACGCCCTGTCGTCGAGCCGCACGCATGCTCGCATGACAT
CGTGGAATTGACGAATGGCCGAAATGTTCTTGTGTGGAACGCCAAAACGG
GCGAGTATGGTCCAGAGGAGGGTTCGATCAACGGAGTCATACGCTTTGGT
AAGGTCGATCAAGCATACATACAACGAAATTCATTTCTTCCGCGCAAACT
CCTGTAGCCGACAAATCACGAACATCATATCGGTGGTAGAACGGTTCGGT
CGGAAACCATTCTGTTCCTCCGGCAGGATCCCCACGTCCTCGCAGTACTC
TCTGAGGCGGCGAGCGATGATCTTCAGCAGTATCTTGTCGGCGTGCACCA
CCAGCGAGATCCCCCTGTAGTTGCCGCACTCTGTCCGATCCTTCTTTTCA
TGGAGTACCATGGTGATGGCTTATTTACGCTGCTGCGGCACCTCGCCTCC
CCTCCAAATACAACGACGATATCGAGCAGTCTCCGGCGCAGGGCGGGATC
ACCGTGGAGGGTGATCTTGAACAGCTCAACGGTGAATCCGTCAGGTCCGA
CAGCCTTTCCGTTCGCCAACGAGTGGATGGCGCCTGCCAGCTCCTGTATC
ATGGGCTGAACTCCTAGTGGCATGTTCTCGGGCCACTGCTCAAGGCCTTT
GGCGATGCTCGGGTCGACCTTCGGTGACTTGGCGTTGAGGAGAGTGTGGA
ACAACCGGACCCATCGTTCGTGGATGAGTTCAACGTCCCTCAGGAGTACG
CCGTCCTCGTCTTTGACGTGCGCCAAGCTGCGGTCTCGCTTCCCTTCCAG
ATAAATCGTCTTTAGATGTTTGTAGAAGCCGGCCTGGTCGCCTTCTCGAG
CGCGTGTTTCGAGTGTACGGACGAAGTCCCAGAAGAAGCTCAGCACGGCA
GCCTTGCGAACCTTGCGGAGACTTTTTCCAGTCATCTTCACGGCCTTTCG
AAGGTTGCTGTTGTGGGATTCGGTGCGTAGGTGCCTCCTCGCCTCCTCTC
TCTGTTGCCATGCTGCGTTCATCTCAGCCTCCACACCGGGCCCCGCGCTC
GAACCCTGCGCGGGTGATTAGAGCGTGATGCCAGTTCGGCCGCAGTGGAA
AGCATGACGTCGGCCATGTCGCTGGCGATGTCAGTGATGCAGGTGCCATC
GGGGTGGTGTTAGTGCGGCAACCATCGCGTTTGCAACCTAGGATCGAAGG
TTCGGGTCAGCCATCAAACGCCTGAGGTCGGCCGTCTTCGGAATTTCCTT
GATACTGTCCCTCTTCCTCCGGTTTGGTGCGGACCTGCGTGGGATGCGGA
CTTTCGCGTATACGAGATTGTGATCCGATTCTGGCTCTAAAGGGGGCCGA
CGGACATTAACGCAACGGATGAGTTGACGGTCCGCCTGCTTTGTCAGGAT
ATAGTCCAGACGTGCTTGTCCCTTGCTGCGGCTGGCACTTTGGAACGTCT
AGGACATCCCACTTTTGGGGGTGCAAAATAAAGTGTTTAGAATAATAAAG
AGCACGTCTGGTGCAGACCTTCGTGAGGACAACTGCTGGCCACTGATTGT
ATCCTCTGGCCGATGCGATCACCTTCTGTAGAGCGGCATAAAATGGGGGC
CTCTTTGCAACAAGTGCAGCCACTGACGCTGCATTTTCCTCCTTGATCTT
GTTGGTCTTGCCGATACTTTGTAGCCTTAGTGCACGCGCTTCGATTTGAG
CACTCTCGGCCTCGAATTCGCTGTCCGTCTCGCTCTCCGCGGACCCATTC
GGTGTGCCATGTCTGTCCAGCGAATGGGTCCGCGGAGAGCGAGACGGACA
GCGAATTCGAGACCGAGAGTGCTCGAATCGAAGCGCGTGCACTAAGGCTA
CAAAGTATCGGTAAGACCAATAAGATCAAGGAGGAAAATGCAGCGTCAGT
GGCTGCACTTGTTGCAAAGAGGCCCCCCTTTTATGCCGCTCTACAGAAGG
TGATCGCATCGGCCAGAGGATACAATCAGTGGCCAGCAGTTGTCCTCACG
AAGGTCTGCACCAGACGTGCTCTTAAAGGACTGTCAAATTGCAAGGTAAC
GAGCTTGTTGTCTTCTGCGAAACTTAGCAGTAGTTTGCCGTTTTCGTTGA
GCACGTCTCAAGCCATATGTGCCCAAAACCCTGCTGCCTGCATCCCCGCC
TCCCTCATGACTCTTTCCTGTTCTGGCGTTCGCGTTGTTTAATGATCTCC
TCTTTTATCGCCAGCCCAACCCAATGTCGGCCTTTCCTGCCCTTGACCCC
GCTGCAATCACCTCTGGAAAAAACGCGGTATCCAGATGCCACGATTTCGG
AAGTTCCGTCTTTTTTGGTCTCCTGCAGTCCAAAAACGTCACAGCCCTTC
GCAGCACAGGGTCTCAGCAGGGTGTCGATGTGGCCGATACCGTTAGCGCC
GTTGACCGCTGCTGTGCGAACGCTGAACGTGCCGAACGTGACCTCGTCCA
GCCGAGACCTCGCCCTGGCGACCTCGTGTTTCATGCGGGCGTCCTTCCTC
TCCGCCCGCTTCCCCCGTCGCTTCTTCCGAGCAAATGCCCTCCGCCTTTC
ACTCACTTCCAGGTGTTTTCTACCAAGGTTCTTGCCTTGTTCTTCCGACG
TGTTGGGTGCGGTACTCCTACCACGCCTCTACTTCTCCGTCGTCGACACT
TTTGCTTACTCGCGTATGCCCTCCGAGCATCTCTACTCTCCTCGCTTCGG
ATCCCACGTTTTCCGCGGCGGCGGTGTACCAACTTGCACGGTTGCCGCGG
GAAACGATTTCACTTTGTTGGGGTGCATCACCACCAGTCAATGCTGTTAC
CAGACTTGCACTGTCAGCTTCGACGAGTTCTCGCATCAATCGACGTCATG
CAAGGACATCGATTCATGAGATAACTCCATAGTCAGCACGCCAAGTAACT
GCTGTTGTCGCTTACCCTGGGACCTTCCTATGTATCCACCTAGTCATTAT
CTAAACCTTCTGTTTTATAAAGTACAAAGTGTTGTCACAGGGTATTGGTG
CCCCCCTCGAGTTAAATTGACTGCCCCCTTGATGCACCAAGAAGCTTCTC
TATAGTCTGCAAAAAGTATCCACTCTTAAAATAAACCAAGCAGCCAACAA
GCTCATCATCTCTCGTTGTATCCTAACTACAAGCGTACTACTGCTGTAAG
TAGTACCATCGCGAATGTACCACACCCACAAAACTCTCGCCGCCATGGTC
TGTACGCACTGCCAATAATACTGCGATACAAGCGCGCACTCTACTGCTGT
ATGTTGTATATTTACGTACCGCCGTGAACTATACCACACCCACAAAACTC
TCGCTACCATGCGCCACGGCGCTTCCTAGAGTTGGACATGGCCTGACGAT
GAGCCAGGGAAGGGCCCTGGAGTAGTTACGGCCGCGGGGAAACAGAGCTA
TGAGTTTCGAAAACAGAGCTCGTGATTTCGAAGTCGAGTCTGGCGAGCAT
TTGGCGCCCGAATCAATTTCAAAATCTTCGAAAGTTTTGAAACGATCCTA
TAATATCGTGTAAACGTAAGGGGAACTGAAGGTATATTACAGGTACAGGT
GTCTAAAAATCAGTACTAAGTAAACTATATATACAGTGCCCACGCAAACG
TTCGACGCAATTGCGCCTATATAACGATGCGGATGCTCGGAAAGTTTGGA
TGCCTTCACAACTTTCTATAAACCTTACACTACTCTATACGGTCAGCATA
TATAGCAGAGTGTGGGTCAACCGCGTAAGGTGACCATCTTTGCTCGTGGT
CAGATAGCTGAACAGGGAAAATTAATGTTTCCCTGTCCCCGCTCGCGCCT
GAGACGGATTTGGCAGTCCCGTCCCGCGTCAGCCTTCTTATTCTCTATAC
TCAGGCTGAACCTAATCTGGTGCTTACGCACGGGATTCCTCCCGATTTCC
GCAGCGGCGTCCATTTATGTATTCAAACGCCATACGCCATCGGGCCAGTT
CCGATTTTATCGGGTCACGCAATTGCGTACCGATGGCGTTCACTGCCGAG
AGTCAGTCGGCACAGGTCCAGTAAACCTCGAGGTAATGCCAAACGTGTGC
TGCCTTGGCAGGTCACCATGGACCAATCAATATGCGCCTCTATTTTCCCA
CAACCACTATTTGTACAGTATGATGTGACGTGGGCATGTTGGAAGTGTCG
GAGGCGTGCCATGTGAGCCGTTGACAATATTCAAGGGGCAATAGCTTTAC
TCTTCACTGAGGAGCATCCTGTCCCTATCATATAGGCTATAGATAGATGG
CTCACATTAGAAAGGAGAGCCATACAAACAAGTTGTGCGTGTTTCGCATG
TTACCCCTGTCTTGTAGTCCTCTCCTTCAATATAACATGAAGTGGAAGCC
AAAAGATTGAGTTCCATTGCGGGTTATCATTTTTGTCATGTGCACAAGAG
GTTTCTTATCATGCGCGGTATCCCCGCTCGGCGTGCCGGCTTCATTCCCC
CAAAATTCGACTTGAAAAGAATAAAGCAGGGCGACTTGACAGATCCGGAC
TACTTCGACTTCATTAGCTTCGCGCAGTACGCGACGATCGCAATGGCGAT
GAGAAATGGCCGAGATATCTTCGAGGAAAAAGTAGGGGCGGAGGGAGACA
AGAGAACTGTCCAGCGTGACCCAGAGTTAAAGGATAATGGTCGCCTGCCC
GAAGAGCATGCCCGAAGGGTGGGCGATAGAATTCTGGTGAGCAAAGTCTG
CGTCTCTAACTTCGATTTACCTCTTTAAGGCTCACATGCCCAGTTTTAAG
TCTGAGCTGAATACCTCGCGTGGTACACGGTTGCGAGCTGCTGTCAGACG
CTCGATCACAACCACGATGCTTCACGTACGGTATCTGGCGCGATGTGCCG
AGCTTGCTGGCGACGATATACACGAATTCACCTCTTGTCTTGCACGATCA
CACTCTGCTGCTGTCGCTGCTGTTCATGTCTATACATCGCCCGCTCTTGC
CCTTAAAAGGCCTACTGCACGGAAACCTTTGGGTCGACGAAGCTGGCGCC
TGTGATAGCGAACGGGCTTTCCGTGGGGAACTTGCAGGAGGGATGCGACC
GCATCATGAACCTCTTGCGCCTCAACTTCTACGTCCTAGACTCCAGCGTT
GGGTCGCAAGTTGATCGTCGGATCCTAACGGTGCGAAGTTGTAGGATCAT
TTTGATAGGATCAACTTGTAGCCTCGATAGGAACTGATACCGCACAGGAA
GGAGGCAACTCCCGCGTTCAATTCATGCAGCACGAGATGTTATGCATTAT
TAAAACATGATACCTGGCGACCGTTAAAGAGGAGTTCCTCAAAGACAGGA
TACAAAGCCCGGGACCGTGTCAGATGTAGCACGGGTACCACTTTTACCGA
TCAGCCAAAGCTGTAATGCTACATCTTACATCCTACCTTACATCCTACAA
AACCTTTATCCGGAGGGAGGGAGGGGTGGGGTCGATTTTACCATCGATCT
TACTCCAACGTCAACGTCGCCAACTTTGCCATCATCGCCGACATCCGCGC
TCGTCCCGACACCCAACACAAGCCAGCGTAGCACTATGAAATATGTACGG
CTTTCCACTTTATGCCAGCTTCCTTCCCGCTCAACGATGGAAAACTATGT
ACCAGATGAGGAAATCGGAAATTGAATCCCAGATACCCGTTGAGCTTATT
TATGTTGTAAACCAAGCCAGAGTATTTATAGCGTATATACTTAAGCAAAT
TGAGAAACATGGTAAATCTTTAATGAAGACCGACCTCCGCTTTCTAGACA
TGTCCCCGCTGGCATCATGAAAAGCTGTGCCAAGGTTCCAGCCCATGCTG
CGAGGGGAATTATTCGTGACTCACGTCAGGACATGCTTTCACGGCAGGTC
AAGGCGACAGCGCCCGCTACGATCTGGGGGCAACAGGTGCTGGCGCAGAG
AAGGGATCGACCGGCCAACGACTTTGAAGCAAAAACTGTGTTGGCGTATC
TTCGAGCATGCGGGCTCGTCGGGGCTACTTACTCGACAGCGTTCAGCGGC
CTCGACGTTATCCACACGTTCCGATTGTGA
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig12:146951..165030+

>mRNA_A-nodosum_M_contig12.17.1 ID=mRNA_A-nodosum_M_contig12.17.1|Name=mRNA_A-nodosum_M_contig12.17.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=804bp|location=Sequence derived from alignment at A-nodosum_M_contig12:146951..165030+ (Ascophyllum nodosum dioecious)
ATGGTGGAAGAGGGATACCTGACTTGGCTGTCGAAGCGAATCGAGCGCTC
TCAGAGGCCGCCGTTCATCAAGATTCCCAGGGCGAAGATGACACGAGACT
TCGCTGTGCTCCTCATGCGCAGTTCTTACCAGGTATGTGACGAACTGGAC
TTCGTCCCGATGGATGATTTCCAGAAGCGATTCTTTCTACTTCGACAGGA
CGAGTGGTCCCCTTACAAGGAGAACTTCCCTCGAATAAAGCAGGGCGACT
TGACAGATCCGGACTACTTCGACTTCATTAGCTTCGCGCAGTACGCGACG
ATCGCAATGGCGATGAGAAATGGCCGAGATATCTTCGAGGAAAAAGTAGG
GGCGGAGGGAGACAAGAGAACTGTCCAGCGTGACCCAGAGTTAAAGGATA
ATGGTCGCCTGCCCGAAGAGCATGCCCGAAGGGTGGGCGATAGAATTCTG
GCCTACTGCACGGAAACCTTTGGGTCGACGAAGCTGGCGCCTGTGATAGC
GAACGGGCTTTCCGTGGGGAACTTGCAGGAGGGATGCGACCGCATCATGA
ACCTCTTGCGCCTCAACTTCTACGTCCTAGACTCCAGCGTTGGGTCGCAA
GTTGATCGTCGGATCCTAACGGTCAAGGCGACAGCGCCCGCTACGATCTG
GGGGCAACAGGTGCTGGCGCAGAGAAGGGATCGACCGGCCAACGACTTTG
AAGCAAAAACTGTGTTGGCGTATCTTCGAGCATGCGGGCTCGTCGGGGCT
ACTTACTCGACAGCGTTCAGCGGCCTCGACGTTATCCACACGTTCCGATT
GTGA
back to top