mRNA_A-nodosum_M_contig12.122.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig12.122.1 vs. uniprot
Match: D8LCC5_ECTSI (Deubiquitinating enzyme A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCC5_ECTSI) HSP 1 Score: 674 bits (1740), Expect = 4.330e-226 Identity = 409/760 (53.82%), Postives = 475/760 (62.50%), Query Frame = 3
Query: 450 ENTRPTGRTDNPAAAAPLLASTQGFGSHIG--------------PEVDD----------SVQDQHLTAEGSL---GTASVLTRRQSASG---------ANRVDDGRRSDI---MWRRTLRIGSNLDVKDTVDKWCEASVIDLDGEAGMVRVTYTFWTPKWDEWIRIDSPRLAPPSSRTYQEGGPLRIGHRVEALDETKTLALTNVPFQWLEAEVIEESPEGRALLHFRSYHKKFDFWAWPHEGKVRQFGPYRSVPKG-SRSSSRKVSLAPGQQHVRQIEQLSNRYEHYRRALESRRLRVVPVEGDGNCLFRSVSHQVYGDQNYHALVRARCMDYMESEAHFFEPYVEGDMVAFLRYVTTKRQNAVWGDDPEVQALCEIYDRPAEIWAYDPQLGAKTLRTFHEAAGRARGQLEARRPPMRLSYYGGGHYDSVSPIDDRAP-VGEES---------------------------QASATIPEPGVLEESALERSRRRKAEAGSGSRWDPEEMKLRQEDE-SPSEQSIMDHALAWSRNVFEAQFDDIESALVASVDHMEESHLSSLKAASRDSELVVLQEEMLLTAQAQSEEEQLRKALEASRCSAAAAAAEAEMVSQAIAESMAL-----------TSGGLTEKAGTVEGKPSSGA----------------------------DGQDNQVHGAAAAGNMVAGEDEDEDLKKALLLSGMVE--EWEA-PPEGVGTGQDFDLDELQEDP-ELRFAINASLAGD 2393
EN RP G TDNPAAA A + GS +G PEVD + D+ A + G L +Q +G + R D+ MW+ L++GSNLDVKDTVDKWCEA+V +D EA V V+YT+W PKWDEWI IDSP LAP + TYQ GGPLR+GHRVE LDE +WLEA+V+E + +GRA +HF+ Y KKFD W P G+VRQ+GP+R KG +RSS+R+ SLAPGQQHVRQI QLS+RYEHYRRAL SR LRVVPVEGDGNCLFRSVSHQVYGD N+H LVRARCMDYMESEAHFFEPYVEGDM AFLRY+ KRQNAVWGDDPEVQALCEIYDRPAEIWAYDPQLGAKTLRTFHEAAG A G+ + RPPMRLSYYGGGHYDSV+P+D + P VG+ + A + PEPG LEE+ALERS+ R AE GSG RWD EEMK+R++DE SP+ ++ MDHALAWSRNVFEAQFDD++SALVASVDHME+S+LSSL+AASRDSELVVLQEEML TAQAQSEEEQLR ALEASR S +V QA+AESM + G+ G G S A LKKALL+SGM WE P E G + F +D+L+ED +LR AI ASLAG+
Sbjct: 43 ENVRPAGWTDNPAAAGAAAAQARAGGSVLGVLSARSTTQQGGGGPEVDSYSLLRPAGGTPLSDRRQEAAAGVMNPGQTRGLEHQQRYAGGEARGGTAESKRAASSEAGDVELEMWKLGLQVGSNLDVKDTVDKWCEATVTAVDREAARVYVSYTYWAPKWDEWISIDSPFLAPAGTMTYQPGGPLRVGHRVEVLDEANQFLPARFGHKWLEADVVEAAEDGRARVHFKGYAKKFDVWVSPRGGRVRQYGPHRVAAKGGNRSSARQASLAPGQQHVRQIAQLSSRYEHYRRALGSRGLRVVPVEGDGNCLFRSVSHQVYGDDNHHRLVRARCMDYMESEAHFFEPYVEGDMAAFLRYLEVKRQNAVWGDDPEVQALCEIYDRPAEIWAYDPQLGAKTLRTFHEAAGSAGGRHGSPRPPMRLSYYGGGHYDSVAPLDSQPPLVGDAAGPAGXXXXXXXXXXXXXXXXXXXXXXXDAVSPAPEPGQLEEAALERSKIRAAEVGSG-RWDLEEMKMRKDDENSPAGRAAMDHALAWSRNVFEAQFDDLDSALVASVDHMEQSNLSSLEAASRDSELVVLQEEMLRTAQAQSEEEQLRNALEASRNSXXXXXXXXXLVRQAMAESMGAGXXXXXXXXXXXASGVCVDGGNARGDVGSPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKALLMSGMAAGGAWETLPAEAGGPAKGFGVDDLEEDDAQLRLAIEASLAGE 801
BLAST of mRNA_A-nodosum_M_contig12.122.1 vs. uniprot
Match: K3WER0_GLOUD (Deubiquitinating enzyme A n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WER0_GLOUD) HSP 1 Score: 311 bits (798), Expect = 6.270e-90 Identity = 222/603 (36.82%), Postives = 311/603 (51.58%), Query Frame = 3
Query: 642 RVDDGRRSDIMWRRTLRIGSNLDVKDTVDKWCEASVIDL-DGEAGMVRVTYTFWTPKWDEWIRIDSPRLAPPSSRTYQEGGPLRIGHRVEALDETKTLALTNVPFQWLEAEVIEESPEGRALLHFRSYHKKFDFWAWPHEGKVRQFGPYRSVPKGSR------SSSRKVSLAPGQQHVRQIEQLSNRYEHYRRALESRRLRVVPVEGDGNCLFRSVSHQVYGDQNYHALVRARCMDYMESEAHFFEPYVEGDMVAFLRYVTTKRQNAVWGDDPEVQALCEIYDRPAEIWAYDPQLGAKTLRTFHEAAGRARGQLEARRPPMRLSYYGGGHYDSVSPIDDRAPVGEESQASATIPEPGVLEESALERSRRRKAEAGSGSRWDPEEMKLRQEDESPSEQSIMDHALAWSRNVFEAQFDDIESALVASVDHMEESHLSS---------LKAASRDSELVVLQEEMLLTAQAQSEEEQLRKALEASRCSAAAAAAEAEMVSQAIAESMALTSGGLTEKAGTVEGKPSSGADGQDNQVHGAAAAGNMVAGEDEDEDLKKALLLSGM-----VEEWEAPPEGVGTGQDFDLD-ELQEDPELRFAINASL 2384
R+D G DI WRR L +G LD ++ WC A+++ + DGE +R+ Y W W+ DS +LA P+++T + P+R+ ++E KT V W EA V+ P L+ + ++FD W F P VP G S R++S+ P + H Q + R+E YR ALE++ L++ P+EGDGNCLFRSVSHQVYGD +HA+VRA CMDYMESE +FEPYV GDM AFLRY+ KR+ VWGDDPE+QA+CE+YDRPAE++AYDP G + LRTFHE++G L RPP+ LSYYGGGHYDS+ VG + PG E LE SRR S + + D +E + ++ L SRN F+ +++ L S++ E S+ ++ ++ A R+SE+ +Q +++ A+ SEEE ++KA+EAS + A A + + Q S + G + S+G A G A D DE L+ AL LS +W P G G+ E ED EL+ AI ASL
Sbjct: 81 RIDPG---DIEWRRQLHVGDPLDAQNVFGNWCPATILRMADGE---LRIKYLNMNDAWHRWLPSDSGQLAQPATKTRNDSSPVRLAQQIEV---RKT-----VHGVWKEAHVVRCRPSD-ILVRYAGRQQQFDEWI--------PFVPDTVVPLGEHIHHRNFSMQRQLSVNP-KTHAPSHAQ-NPRFEQYRNALEAQGLQIYPIEGDGNCLFRSVSHQVYGDDRHHAVVRAMCMDYMESEKEYFEPYVVGDMEAFLRYLNYKRRQGVWGDDPELQAMCELYDRPAEVYAYDPVHGFRKLRTFHESSG-----LSRNRPPICLSYYGGGHYDSL--------VGMNHSENCIRDPPGEWERRHLEYSRRINTREQDDSTSEVARQVQAESDRETTEMAQLEQTLLLSRNEFDGMNSNLDETLKLSLEEYENSNAATASVGTSDAQIQEAKRESEMTAIQADLIAKAKQASEEELMKKAIEASLETLPAGANDMDFDDQ--------VSAAIKASLGHLGHNKSAG------------AGGATTAASDYDEQLRLALELSAQEYTTTASDWMFSP---GGGEHTTASGENDEDAELQRAIQASL 622
BLAST of mRNA_A-nodosum_M_contig12.122.1 vs. uniprot
Match: W2LIN5_PHYPR (Deubiquitinating enzyme A n=12 Tax=Phytophthora TaxID=4783 RepID=W2LIN5_PHYPR) HSP 1 Score: 297 bits (761), Expect = 2.510e-85 Identity = 186/469 (39.66%), Postives = 265/469 (56.50%), Query Frame = 3
Query: 666 DIMWRRTLRIGSNLDVKDTVDKWCEASVIDL-DGEAGMVRVTYTFWTPKWDEWIRIDSPRLAPPSSRTYQEGGPLRIGHRVEALDETKTLALTNVPFQWLEAEVIEESPEGRALLHFRSYHKKFDFWAWPHEGKVRQFGPYRSVP-KGSRSSSRKVSL-APGQQHVRQIEQLSNRYEHYRRALESRR-LRVVPVEGDGNCLFRSVSHQVYGDQNYHALVRARCMDYMESEAHFFEPYVEGDMVAFLRYVTTKRQNAVWGDDPEVQALCEIYDRPAEIWAYDPQLGAKTLRTFHEAAGRARGQLEARRPPMRLSYYGGGHYDSVSPIDDRAPVGEESQASATIPEPGVLEESALERSRRRKAEAGSGSRWDPEEMKLRQEDESPSEQSIMDHALAWSRNVFEAQFDDIESALVAS-VDHMEESHLSS------LKAASRDSELVVLQEEMLLTAQAQSEEEQLRKALEAS 2039
D WRR + +G +D ++ WC A V+ + DGE V + + W +W+++DS RLA + + P+R ++E +L W EA + G L+ + +KFD W KV G + + +GS RK+++ AP H R I+ + R+ HYR +L++ L + +EGDGNCLFRSVSHQVYGD ++HALVRA CMDYMESE +FEPYV GDM AF+RY+ KR++ VWGDDPE+QALCE+YDRPAE++AYDPQ G + LR FHE + AR RPP+RLSYYGGGHYDS+ VG + QA+ PG E+ + S R + E+ Q D +E ++ L SRN F+A +E L S V++ E S + ++ A+R+SE+ +Q E+L A+A+SEEEQ++ A++AS
Sbjct: 42 DYEWRRQMHVGDQVDAQNVFGNWCPARVLQIADGE---VLLQFLNMHESWHQWLQMDSGRLAQSGIKARNDSAPIRQAQQIEVRPGGGNSSL------WKEALAVRAGG-GSVLVRYPGRDQKFDEWIQFTPAKVAPAGEHLQLRGRGSTLEQRKLAVDAPNATHRRVIQAQNPRFTHYRDSLQATLGLTIHDIEGDGNCLFRSVSHQVYGDDSHHALVRAACMDYMESEKEYFEPYVVGDMAAFMRYLRYKRRDGVWGDDPELQALCELYDRPAEVFAYDPQQGFRKLRCFHENSALAR-----TRPPIRLSYYGGGHYDSL--------VGPDHQANLIRERPGQWEQRHIGYSHRINSRETRNDVSGVEQEVQAQSDRERTEVEQLEQVLVQSRNEFDAMDKSLEETLKLSLVEYGEASPAQAHREREEIEEATRESEMAAIQAELLAKAKAESEEEQMKSAIQAS 487
BLAST of mRNA_A-nodosum_M_contig12.122.1 vs. uniprot
Match: A0A8J5J3G2_9STRA (OTU domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J3G2_9STRA) HSP 1 Score: 300 bits (768), Expect = 4.160e-84 Identity = 183/470 (38.94%), Postives = 266/470 (56.60%), Query Frame = 3
Query: 666 DIMWRRTLRIGSNLDVKDTVDKWCEASVIDL-DGEAGMVRVTYTFWTPKWDEWIRIDSPRLAPPSSRTYQEGGPLRIGHRVEALDETKTLALTNVPFQWLEAEVIEESPEGRALLHFRSYHKKFDFWAWPHEGKVRQFGPYRSVP-KGSRSSSRKVSL-APGQQHVRQIEQLSNRYEHYRRALESRR-LRVVPVEGDGNCLFRSVSHQVYGDQNYHALVRARCMDYMESEAHFFEPYVEGDMVAFLRYVTTKRQNAVWGDDPEVQALCEIYDRPAEIWAYDPQLGAKTLRTFHEAAGRARGQLEARRPPMRLSYYGGGHYDSVSPIDDRAPVGEESQASATIPEPGVLEESALERSRRRKAEAGSGSRWDPEEMKLRQEDESPSEQSIMDHALAWSRNVFEAQFDDIESALVASV-DHMEES-------HLSSLKAASRDSELVVLQEEMLLTAQAQSEEEQLRKALEAS 2039
D WRR + +G +D ++ WC A V+ + DGE V + + W +W+++DS RLA P ++ + P+R +E +L W EA + G L+ + +K+D W KV G + + +GS RK+++ P H R I+ + R+ HYR +L++ LR+ +EGDGNCLFRSVSHQVYGD ++HALVRA CMDYMESE +FEPYV GDM AF+RY++ KR++ VWGDDPE+QALCE+YDRPAE++AYDPQ G + LR FHE + L RPP+RLSYYGGGHYDS+ VG + Q++ +PG E+ + S R + E+ Q D +E ++ L SRN F+A +E L S+ +H E+ ++ A+R+SE+ +Q E+L A+A+SEEEQ++ A++AS
Sbjct: 256 DYEWRRQMHVGDQVDAQNVFGNWCPARVLQIADGE---VLLQFLNMHESWHQWLQLDSGRLAQPGTKARNDSVPIRQAQHIEVRPGGGNSSL------WKEALAVRAGG-GSVLVRYAGRDQKYDEWIQFTPAKVAPAGEHLQLRGRGSMLEQRKMAVDVPNMTHRRVIQAQNPRFTHYRDSLQATLGLRIYDIEGDGNCLFRSVSHQVYGDDSHHALVRAACMDYMESEKEYFEPYVVGDMAAFMRYLSYKRRDGVWGDDPELQALCELYDRPAEVFAYDPQQGFRKLRCFHENSA-----LSRTRPPIRLSYYGGGHYDSL--------VGTDHQSNLIREDPGQWEQRHIGYSHRINSRETRSDVSGVEQEVQTQSDRERTEVEQLEQVLMQSRNEFDAMDRSLEDTLKLSLAEHGGEASPAQAHREREEMEEATRESEMAAIQAELLAKAKAESEEEQMKSAIQAS 702
BLAST of mRNA_A-nodosum_M_contig12.122.1 vs. uniprot
Match: H3GFG4_PHYRM (Deubiquitinating enzyme A n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GFG4_PHYRM) HSP 1 Score: 293 bits (750), Expect = 4.300e-84 Identity = 178/470 (37.87%), Postives = 265/470 (56.38%), Query Frame = 3
Query: 666 DIMWRRTLRIGSNLDVKDTVDKWCEASVIDL-DGEAGMVRVTYTFWTPKWDEWIRIDSPRLAPPSSRTYQEGGPLRIGHRVEALDETKTLALTNVPFQWLEAEVIEESPEGRALLHFRSYHKKFDFWAWPHEGKVRQFGPYRSVP-KGSRSSSRKVSL-APGQQHVRQIEQLSNRYEHYRRALESRR-LRVVPVEGDGNCLFRSVSHQVYGDQNYHALVRARCMDYMESEAHFFEPYVEGDMVAFLRYVTTKRQNAVWGDDPEVQALCEIYDRPAEIWAYDPQLGAKTLRTFHEAAGRARGQLEARRPPMRLSYYGGGHYDSVSPIDDRAPVGEESQASATIPEPGVLEESALERSRRRKAEAGSGSRWDPEEMKLRQEDESPSEQSIMDHALAWSRNVFEAQFDDIESALVASV-DHMEES-------HLSSLKAASRDSELVVLQEEMLLTAQAQSEEEQLRKALEAS 2039
D WRR + +G +D ++T WC AS++ L DGE V + + W +W+++DS RLA P ++ + P+R ++E +L W EA ++ + L+ + +KFD W V G + + +GS R++ + AP H R I+ + R+ HYR +L++ L++ +EGDGNCLFRSVSHQVYGD ++HALVRA CMDYMESE +FEPYV GDM AF+RY+ KR++ VWGDDPE+QALCE+YDRPAE++AYDP G + LR FHE + L RPP+RLSYYGGGHYDS+ VG + + + PG E+ + S R + E+ + D +E +++ L SRN F+A +E L S+ +H E + ++ A+R+SE+ +Q E+L A+A+SE+EQ++ ++AS
Sbjct: 42 DFEWRRQMHVGDQVDAQNTFGNWCPASILQLADGE---VLLQFLNMNDSWHQWLQVDSGRLAQPETKARNDSMPIRQAQQIEVRPGGTNSSL------WKEAFAVKAFGR-KVLVRYAGRDQKFDEWVLFSPATVAPAGEHLQLRGRGSSLQQRQMVVDAPDMTHRRVIQAQNPRFTHYRESLQATLGLQICDIEGDGNCLFRSVSHQVYGDDSHHALVRAACMDYMESEKEYFEPYVVGDMAAFMRYLRYKRRDGVWGDDPELQALCELYDRPAEVFAYDPAEGFRKLRCFHENSA-----LSRSRPPIRLSYYGGGHYDSL--------VGPDHETNLIRETPGQWEQRHIGYSHRINSRETRNEVASIEQQVQTESDRERTEVEQLENILMLSRNEFDAMDTSLEETLKKSLAEHGGEGPPAQAHRERADIEEATRESEMAAIQTELLAKAKAESEDEQMKSVIQAS 488
BLAST of mRNA_A-nodosum_M_contig12.122.1 vs. uniprot
Match: G4Z036_PHYSP (Deubiquitinating enzyme A n=6 Tax=Phytophthora TaxID=4783 RepID=G4Z036_PHYSP) HSP 1 Score: 293 bits (749), Expect = 8.630e-84 Identity = 209/585 (35.73%), Postives = 302/585 (51.62%), Query Frame = 3
Query: 666 DIMWRRTLRIGSNLDVKDTVDKWCEASVIDL-DGEAGMVRVTYTFWTPKWDEWIRIDSPRLAPPSSRTYQEGGPLRIGHRVEALDETKTLALTNVPFQWLEAEVIEESPEGRALLHFRSYHKKFDFWAWPHEGKVRQFGPYRSVP-KGSRSSSRKVSL-APGQQHVRQIEQLSNRYEHYRRALESRR-LRVVPVEGDGNCLFRSVSHQVYGDQNYHALVRARCMDYMESEAHFFEPYVEGDMVAFLRYVTTKRQNAVWGDDPEVQALCEIYDRPAEIWAYDPQLGAKTLRTFHEAAGRARGQLEARRPPMRLSYYGGGHYDSVSPIDDRAPVGEESQASATIPEPGVLEESALERSRRRKAEAGSGSRWDPEEMKLRQEDESPSEQSIMDHALAWSRNVFEAQFDDIESALVASV-DHMEES-------HLSSLKAASRDSELVVLQEEMLLTAQAQSEEEQLRKALEASRCSAAAAAAEAEMVSQAIAESMALTSGGLTEKAGTVEGKPSSGADGQDNQVHGAAAAGNMVAGEDEDEDLKKALLLSGMVEEWEAPPEGVGTGQDFDLDELQEDPELRFAINASL 2384
D WRR + +G +D ++ WC A V+ + DGEA + + W +W+ +DS RLA P ++ + P+R ++E +L W EA + + G L+ + +KFD W V G + + +GS RK+ + AP H R I+ + R+ HYR +L++ LR+ +EGDGNCLFRSVSHQVYGD ++HALVRA CMDYMESE +FEPYV GDM AF+RY+ KR++ VWGDDPE+QALCE+YDRPAE++AYDP G + LR FHE + L RPP+RLSYYGGGHYDS+ VG + A+ PG E+ +E S R + E+ Q D +E ++ L SRN F+A +E L S+ +H E+ + ++ A+R+SE+ +Q E+L A+A+SEEE ++ A++AS A ++ + +Q A A G A G + +D DE L++A+ LS A P G+ + DE+ E L+ AI ASL
Sbjct: 25 DYEWRRQMHVGDQVDAQNVFGNWCPARVMQVADGEA---LLQFLNMHDSWRQWLSVDSGRLAQPGTKARNDSVPVRQAQQIEVRPGGGNSSL------WKEAFAVR-ARGGTVLVRYAGRDQKFDEWIPFTPATVAPAGDHLQLRGRGSALEQRKMVVDAPNVTHRRVIQAQNPRFTHYRDSLQATLGLRIHDIEGDGNCLFRSVSHQVYGDDSHHALVRAACMDYMESEKEYFEPYVVGDMAAFMRYLRYKRRDGVWGDDPELQALCELYDRPAEVFAYDPVQGFRKLRCFHENSA-----LSRSRPPIRLSYYGGGHYDSL--------VGADHAANLIRETPGQWEQRHIEYSHRINSRETHDDVAGVEQQVQAQSDRERTEVEQLEQILMQSRNEFDAMDASLEETLKLSLAEHGGEASPALANRERNDIEEATRESEMAAIQAELLAKAKAESEEEHMKTAIQAS-LGGHALVSDGDFDAQMSAAIQASL---------------------------GDAGPGASIHADDYDEQLRRAMELSAQEYAPPAQPFGLYGDESASTDEMDE---LQRAIQASL 555
BLAST of mRNA_A-nodosum_M_contig12.122.1 vs. uniprot
Match: A0A5D6YD11_9STRA (Deubiquitinating enzyme A n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YD11_9STRA) HSP 1 Score: 299 bits (766), Expect = 2.910e-83 Identity = 187/496 (37.70%), Postives = 266/496 (53.63%), Query Frame = 3
Query: 648 DDGRRSDIMWRRTLRIGSNLDVKDTVDKWCEASVIDL-DGEAGMVRVTYTFWTPKWDEWIRIDSPRLAPPSSRTYQEGGPLRIGHRVEALDETKTLALTNVPFQWLEAEVIEESPEGRALLHFRSYHKKFDFWAWPHEGKVRQFGPYRSVPKG------SRSSSRKVSLAPGQQHVRQIEQLSNRYEHYRRALESRRLRVVPVEGDGNCLFRSVSHQVYGDQNYHALVRARCMDYMESEAHFFEPYVEGDMVAFLRYVTTKRQNAVWGDDPEVQALCEIYDRPAEIWAYDPQLGAKTLRTFHEAAGRARGQLEARRPPMRLSYYGGGHYDSVSPIDDRAPVGEESQASATIPEPGVLEESALERSRRRKAEAGSGSRWDPEEMKLRQE-----DESPSEQSIMDHALAWSRNVFEAQFDDIESALVASVDHMEES--------------------HLSSLKAASRDSELVVLQEEMLLTAQAQSEEEQLRKALEAS 2039
D DI WRR L +G +D ++ WC A ++ + DGE +++ + W WI DS +LA P+++T + P+R+ ++E KT V W EA V+ P + + ++FD W F P P G S ++ R++S+AP H R E + R++HYR ALE LR+ P++GDGNCLFRSVSHQVYGD +HA VRA CMDYMESE +FEPYV GDM AF+RY+ KR+ VWGDDPE+QA+CE+YDRPAE++AYDP G + LRTFHE++G +R RPP+RLSYYGGGHYDS+ VG + A+ PG E +E SRR + R D + + E D +E + ++ L SR F+ ++ L S++ E S L+ A+R+SE+ +Q +++ + SEEE ++KA+EAS
Sbjct: 300 DTDMEEDIEWRRQLHVGDPVDAQNVFGNWCPAMILRMVDGE---LQIRFLNMNDAWHRWIPSDSGQLAQPATKTRNDSFPVRLAQQIEV---RKT-----VHGVWKEAHVVRARPSD-VRVRYAGRQQQFDEWI--------PFSPDTVAPLGEHTRHRSFAAQRQLSVAPKHAHHRVFETRNPRFQHYREALERHGLRICPIDGDGNCLFRSVSHQVYGDDRHHAAVRAMCMDYMESEKEYFEPYVVGDMAAFVRYLNYKRRAGVWGDDPELQAMCELYDRPAEVYAYDPAHGFRKLRTFHESSGVSRS-----RPPIRLSYYGGGHYDSL--------VGLDHAANCIRDAPGEWERRHIEYSRR----INTRDRDDAADADVALEVAAESDRETTEMAQLEQMLLLSRTEFDGMDSSLDDTLKLSLEEYERSGGAEAAASGGAGAGDVAVEREQQELRDATRESEMAAIQADLIAKVKQASEEEMVKKAIEAS 758
BLAST of mRNA_A-nodosum_M_contig12.122.1 vs. uniprot
Match: A0A0P1AKP3_PLAHL (Deubiquitinating enzyme A n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKP3_PLAHL) HSP 1 Score: 297 bits (760), Expect = 6.000e-83 Identity = 191/478 (39.96%), Postives = 266/478 (55.65%), Query Frame = 3
Query: 666 DIMWRRTLRIGSNLDVKDTVDKWCEASVIDL-DGEAGMVRVTYTFWTPKWDEWIRIDSPRLAPPSSRTYQEGGPLRIGHRVEALDETKTLALTNVPFQWLEAEVIEESPEGRALLHFRSYHKKFDFWAWPHEGKVRQFGPYRSVP---------KGSRSSSRKVSL-APGQQHVRQIEQLSNRYEHYRRALESRR-LRVVPVEGDGNCLFRSVSHQVYGDQNYHALVRARCMDYMESEAHFFEPYVEGDMVAFLRYVTTKRQNAVWGDDPEVQALCEIYDRPAEIWAYDPQLGAKTLRTFHEAAGRARGQLEARRPPMRLSYYGGGHYDSVSPIDDRAPVGEESQASATIPEPGVLEESALERSRRRKAEAGSGSRWDPEEMKLR-QEDESPSEQSIMDHALAWSRNVFEAQFDDIESALVASV-DHMEESHLS------SLKAASRDSELVVLQEEMLLTAQAQSEEEQLRKALEAS 2039
DI WRR + +G NLD ++ WC A V+ + DGE + + + W +W+ +DS RLA S+T + P+R ++E +L W EA ++ G L+ + K FD W QF P R P +GS RK+ L A H R I+ + R+ HYR +L + LR+ + GDGNCLFRSVSHQVYG+ ++HALVRA CMDYMESE +FEPYV GDM AF+RY+ KR++ VWGDDPE+QALCE+YDRPAE++AYDPQ G + LR FHE +G AR RPP+RLSYYGGGHYDS+ VG + Q + PG E+ + S R + S E K++ Q + +E ++ L SRN F+A +E L S+ +H E+S ++ A+R+SE+ +Q E+L A+ +SEEEQ+ A++AS
Sbjct: 258 DIEWRRQIHVGDNLDAQNVFGNWCPARVLRVADGE---LLLQFLNMHESWHQWLPVDSGRLAQMGSKTRSDSVPIRQAQQIEVRPGGGNSSL------WKEALAVKAGG-GSILVRYAGRDKNFDEWI--------QFTPERVAPAGEHLRLRGRGSLLEQRKMELNASNSPHRRVIQAQNPRFTHYRDSLHAALGLRIFDIAGDGNCLFRSVSHQVYGNDSHHALVRAACMDYMESEKEYFEPYVVGDMAAFMRYLRYKRRDGVWGDDPELQALCELYDRPAEVFAYDPQNGFRKLRCFHENSGLARS-----RPPIRLSYYGGGHYDSL--------VGPDHQVNLVNEIPGQWEQRHIGYSYRINSRENSNDTPGGEGQKVQIQSEHERTEVEQLEQVLVQSRNEFDAMDKSLEETLNLSLAEHEEKSKAQVXXXXXEVEEATRESEIAAIQAELLAKAKEESEEEQMNSAIQAS 704
BLAST of mRNA_A-nodosum_M_contig12.122.1 vs. uniprot
Match: A0A833TF83_PHYIN (Deubiquitinating enzyme A n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TF83_PHYIN) HSP 1 Score: 291 bits (745), Expect = 9.760e-81 Identity = 183/477 (38.36%), Postives = 266/477 (55.77%), Query Frame = 3
Query: 666 DIMWRRTLRIGSNLDVKDTVDKWCEASVIDL-DGEAGMVRVTYTFWTPKWDEWIRIDSPRLAPPSSRTYQEGGPLRIGHRVEALDETKTLALTNVPFQWLEAEVIEESPEGRALLHFRSYHKKFDFWAWPHEGKVRQFGPYRSVP---------KGSRSSSRKVSL-APGQQHVRQIEQLSNRYEHYRRALESRR-LRVVPVEGDGNCLFRSVSHQVYGDQNYHALVRARCMDYMESEAHFFEPYVEGDMVAFLRYVTTKRQNAVWGDDPEVQALCEIYDRPAEIWAYDPQLGAKTLRTFHEAAGRARGQLEARRPPMRLSYYGGGHYDSVSPIDDRAPVGEESQASATIPEPGVLEESALERSRRRKAEAGSGSRWDPEEMKLRQEDESPSEQSIMDHALAWSRNVFEAQFDDIESALVASV-DHMEESHLSS------LKAASRDSELVVLQEEMLLTAQAQSEEEQLRKALEAS 2039
D WRR + +G +D ++ WC A V+ + DGE V + + W +W+++DS RLA ++ + P+R ++E +L W EA + G L+ + +KFD W QF P + P +G+ RK+++ AP H R I+ + R+ HYR +L++ LR+ +EGDGNCLFRSVSHQVYGD +++ALVRA CMDYMESE +FEPYV GDM AF+RY+ KR++ VWGDDPE+QALCE+YDRPAE++AYDPQ G + LR FHE + AR RPP+RLSYYGGGHYDS+ +G + QA+ PG E+ + S R + E+ Q D +E ++ L SRN F+A +E L S+ +H E + + + A+R+SE+ +Q E++ A+A+SEEEQ++ A++AS
Sbjct: 281 DYEWRRQMHVGDLVDAQNIFGNWCPARVLQIADGE---VLLQFLNMHESWHQWLQLDSGRLAQQGTKARNDSAPIRQAQQIEVRPGGGNSSL------WKEALAVRAGG-GSVLVRYPGRDQKFDEWI--------QFTPTKVAPAGEHLQHRGRGTMLEQRKLAVDAPNMTHRRVIQAQNPRFTHYRDSLQATLGLRIYDIEGDGNCLFRSVSHQVYGDDSHYALVRAACMDYMESEKEYFEPYVVGDMAAFMRYLHYKRRDGVWGDDPELQALCELYDRPAEVFAYDPQQGFRKLRCFHENSALARS-----RPPIRLSYYGGGHYDSL--------MGSDHQANLIRETPGQWEQRHIGYSHRINSRETRDDVSGVEQEVQAQSDRERTEVEQLEQVLMQSRNEFDAMDRSLEETLKLSLAEHGEAAPAQAHREREEIAEATRESEMAAIQAELVAKAKAESEEEQMKSAIKAS 726
BLAST of mRNA_A-nodosum_M_contig12.122.1 vs. uniprot
Match: A0A8K1FMD0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMD0_PYTOL) HSP 1 Score: 281 bits (720), Expect = 1.370e-79 Identity = 175/463 (37.80%), Postives = 247/463 (53.35%), Query Frame = 3
Query: 666 DIMWRRTLRIGSNLDVKDTVDKWCEASVID-LDGEAGMVRVTYTFWTPKWDEWIRIDSPRLAPPSSRTYQEGGPLRIGHRVEALDETKTLALTNVPFQWLEAEVIEESPEGRALLHFRSYHKKFDFWAWPHEGKVRQFGPYRSVPKGSRSSSRKVSLAPGQQHVRQIEQLSNRYEHYRRALESRRLRVVPVEGDGNCLFRSVSHQVYGDQNYHALVRARCMDYMESEAHFFEPYVEGDMVAFLRYVTTKRQNAVWGDDPEVQALCEIYDRPAEIWAYDPQLGAKTLRTFHEAAGRARGQLEARRPPMRLSYYGGGHYDSVSPIDDRAPVGEESQASATIPEPGVLEESALERSRRRKAEAGSGSRWDPEEMKLRQEDESPSEQSIMDHALAWSRNVFEAQFDDIESALVASVDHMEESHLSS----LKAASRDSELVVLQEEMLLTAQAQSEEEQLRKALEAS 2039
D+ WRR L +D ++ WC A ++ LDGEA ++ + W W+ +DS +LAPP+++T + PLR+ +E T+ W EA V++ P L+ + ++FD W + P G+ S+ + R+ HYR AL S L++ VEGDGNCLFR+VSHQVYGD YH LVR CMDYMESE +FEPYV GDM FLRY+ KR++ VWGDDPE+QA+CE+YDRPAE++AYDP G + LRTFHE L RP + LSYYGGGHYDS+ VG A+ PG E+ +E SRR G+ + D +E + ++H L SRN F+A ++ +L ++ E + + S L A+++SE+ +Q E+L A+ +SEEE +RKA+ AS
Sbjct: 77 DVEWRRQLHASDPVDAQNIFGNWCPAMILRILDGEA---QIRFLNMNDSWQRWVPLDSGQLAPPATKTRNDSAPLRLAQMIEVRKPGTTM--------WKEAHVVKARPHD-ILVRYAGREQQFDEWI--------PYTPDTVAATGTTSAQ------------------NPRFVHYRDALASEGLQIRAVEGDGNCLFRAVSHQVYGDDQYHGLVRRLCMDYMESEKEYFEPYVVGDMSDFLRYLEHKRRDGVWGDDPEIQAMCELYDRPAEVFAYDPVNGCRKLRTFHENRS-----LSRSRPSICLSYYGGGHYDSL--------VGPNHVANIIQETPGEWEQRHIEYSRRINTREGATGVLQRVQAAS---DRESTEVAQLEHILMVSRNEFDAMHSSLDESLKLTLAESEATAVHSEQRALDVATQESEMAAIQAELLEKARQESEEELMRKAIVAS 485 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig12.122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig12.122.1 >prot_A-nodosum_M_contig12.122.1 ID=prot_A-nodosum_M_contig12.122.1|Name=mRNA_A-nodosum_M_contig12.122.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=695bp MQDRFGGLNVRDAASRPSDPSGRPAAASAASELGGESWEPSRTVYNENTRback to top mRNA from alignment at A-nodosum_M_contig12:1613919..1629061+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig12.122.1 ID=mRNA_A-nodosum_M_contig12.122.1|Name=mRNA_A-nodosum_M_contig12.122.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=15143bp|location=Sequence derived from alignment at A-nodosum_M_contig12:1613919..1629061+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig12:1613919..1629061+ >mRNA_A-nodosum_M_contig12.122.1 ID=mRNA_A-nodosum_M_contig12.122.1|Name=mRNA_A-nodosum_M_contig12.122.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=2085bp|location=Sequence derived from alignment at A-nodosum_M_contig12:1613919..1629061+ (Ascophyllum nodosum dioecious)back to top |