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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 292 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 210 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866613.7654688-CDS-A-nodosum_M_contig1197:69779..69858 | 1680866613.7654688-CDS-A-nodosum_M_contig1197:69779..69858 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1197 69780..69858 + |
| 1680866613.77431-CDS-A-nodosum_M_contig1197:71170..71301 | 1680866613.77431-CDS-A-nodosum_M_contig1197:71170..71301 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1197 71171..71301 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866613.7864625-UTR-A-nodosum_M_contig1197:71301..71318 | 1680866613.7864625-UTR-A-nodosum_M_contig1197:71301..71318 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1197 71302..71318 + |
| 1680866613.796627-UTR-A-nodosum_M_contig1197:72637..72702 | 1680866613.796627-UTR-A-nodosum_M_contig1197:72637..72702 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1197 72638..72702 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1197.6.1 >prot_A-nodosum_M_contig1197.6.1 ID=prot_A-nodosum_M_contig1197.6.1|Name=mRNA_A-nodosum_M_contig1197.6.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=70bp
PSPVHVATILKLLWATHRQQRLSPPSGAANGQDSWGFFRDAQGFGRLDVG
SRTGLTSSRPPSTTMDLGI* back to topmRNA from alignment at A-nodosum_M_contig1197:69780..72702+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig1197.6.1 ID=mRNA_A-nodosum_M_contig1197.6.1|Name=mRNA_A-nodosum_M_contig1197.6.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2923bp|location=Sequence derived from alignment at A-nodosum_M_contig1197:69780..72702+ (Ascophyllum nodosum dioecious)
CCTTCACCAGTGCACGTGGCTACAATTTTAAAGCTCTTGTGGGCTACGCA
TCGACAGCAGCGCTTGAGTCCCCCTAGCGGTAGGTGCCCTTCGGAGTCGA
TGCCGACTTCCCGGTCACGGCATGGCTTGTTGCTATCATATTAGGGTCGG
TGTAAGCGATCAAGTAGTTTGCAAACTTCCAAAAAAGGAGAAGCCGAAAC
TCCTCCAAAGTTTGGAAAAGTTTGGAACCGGTCGTACCAAAATTGAAAAG
TTTGGGAAAATGCGCATTTTGAGTCCTCCCCTTAAACACCTACCTCAGCA
GAAACTACTTCCCCCCTCTCGCGGCCATACGCTTGCCTATGCCTATGCCT
ATGTCTTCGCCTTTGCCCGAAACTCGCTGCAAGCTTATCTCGTTGCCCTT
CTAAATCACACTTAAAGAGTTGGCATCACCACGAGCTCCCCAATATTGTT
TTGAGATTCAGCGGCACGACCCAGAAAGACCCATTAGTAGCTGGTCATGA
GTGGATTGACATCAAGCCATTCGCACAGAGTGTCGTGGGCTGACACCTGG
AGCAGCCCATGTCACGTCAGCCACATGTTGTTTAGGAAAAATCTGAACGC
ATCTAAACCTTCTGAGCATCCACCTCAAGTGGAAGAGTGTCTAAAGGTTT
AGGAGGGAACATTGGCTGTAGAGACAAAACCTCTTCATGGTATCAAAAGG
GTTCCCCAATGTAATTACATCGGGTCGACAGTATAATATCGGGGAGAAGC
CCTCCGTTTGTTGTTTAAAGAAAAATCAGAACGCACCTAGACCTTCTGAG
CATCCCTCAGTCAGGGGGAAAAGGTTGTTTCTCACATTCAGCGTATTGGT
TGCCAACCCGAAAAAAACTACTTTACACGGTGGCCAATCCCGCTCGTGGT
CTGCTGAACAGGGAAAAGAGAACAAAAGAAAAAGTCTGGCAGCATACCCC
CCCACACACACACACACACACACACACTGCTCGTTCGGACACCTGGAGCA
CGTCAGACAAAGGGCCTGTATGAACAGTATCTATCAGGTCTAGAATATCC
ATTTACTGTGTAGACTATTAATAGCTACTAACATTAGTAACACCATATCG
GTGAAAAAACGAGTGAACTATTGAAAACGGAGTGAGAAGATAACTTAATC
ACCGAACAATGTTTTAGCCCGCTGCAAGCAATAGCAATAGCAATGTTTCC
GGAAATACATCAAGTAAGCCGATTTAGCCCAGCAAACGCTCAAACGAAAG
CTTTTACCGATGGGATCACAAATATGGCTATGTTGACTTTTTATAGAAAA
TTACGAAGGTTCGAAAATTTGTCGGAAAATCGATATGGCCTGAAAAGTTT
CTCTGATCTCGGTCTGTTTTCTTCCTACGAGGGCCGACAAGGAGCGGCGA
ACGGGCAAGATTCGTGGGGCTTTTTCAGGGACGCACAGGGCTTTGGACGG
CTGGATGTTGGCTCGCGCACCGGCCTCACCAGCTCAAGGCCTCCCTctaC
CACCATGGACCTCGGTATTTAATTTTTTCTTATTTATATTAATTCTCCGT
TCCCGCGTCTCCCGACCCATGGCCATGACCGGCCATGTCGACGCGACGTG
GGGAGGGTCTTTCTGGCGGGTGTAAGGCCGGACTCACCCTTAAGGAGAAG
GATTCCTTCTTGCTACTGCTCCGGGCCTGGTCGAGGTGCAGCGGTAGAGA
TGGGTCAGCGCAGTGTCCATCAGGCACACACGACCCCTGTTAACTCAGTA
CATGTCAGTGCTCCGCGCGCGGACATGTTCGGCGATTCGGTGTGTGCGCG
AGACGCAGATGGCACTGCTGCCGAAAGCTGGTATGTACCCCTACGAGGGA
GTGCACCCGGTATGTAGGCTGGACTCGGCGACAGGATGGAGAAGCGGTTG
TCGACGGGCGGGAGGTCTGGTTGAGCCTTTCGTTCGAGAAAAAATCCAAG
ACTGGAACCGGAGTGCATAACGAAGGAGGAAGGTGTGGTCGTCACACGAA
GAGAGCAGAGGGTGACGGACCAGGAACAACGACAAGAAGAACACAGGCGG
GGCCATGGACGCTGGTGAGGACGGATGGGAGCGCTGGAGGCCGGCCTCGC
TGAAGGAGGAGGAGCGAAGGAGGCAGATAAGAGAGAGCGGACGATCATTT
CCACCGATGAATTTTTTTCTTACAGTCTGTGTTCTTTTTCAATGTGCAGA
TGGTAGCATCCCATGATTTGTTTCATGGTTGAGGTATAGGACACTCTGGG
CAAACTTTGCCTTTTGTCGAAAGCGCTTTGTCGTGTAGGCAAGACACGCC
CTATCTGTTGTGTTGCTAGACATGTGCTTGACTAGATTCATTCGAGGTCC
TTTCCGATCGTCTCGTTGCCCCGACTCGTCTTTTTGTTTTTTTGGCTCTT
CCTATCTAGCTAGTCTCTGTCTAGTTTCTGTTTCCGCCGCGGGCTTGCAG
AGGGTCATTTCAAACAGCACTTCAGACAGTAGTAGGTAGACTTCTACTGC
GATGATTCCGCATGTGATATTCCGTTACCGCATTGGCGTCGGCTTGGCAT
TTTGCGAATCGTCACCGCAGGTAGCTCGTGTATGCAACATCTCAGCAGCA
GTCTGTGTCAAGGCAGTCGGACGTTGCACGCCGGAATTTGCTTTTCAGCG
GGTTAGTACTACTGTAGTTTGATAGGCCTTTTTTGCGGACTCCGTGGTGC
AAGTTGCCTCTTCTTCGTGTGCGTGTGTTTTTTCTTTTGGTGTCTGCTAG
CCATTAGTTTTAGTTTGGGTACGGATGGTATGCTCCTTGCACTCTGTGAC
CACGGGTTCGAGAGATCGGGCTAATGTGCGGAAAAAAAAAAAAAAAAAAA
AAAAAAAAGTCTGACGTGTGGCCTTGAGAAACTTAGGCTTGTTGATCAAA
ACTGATTGGAGCGTGATTTGTCG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig1197:69780..72702+ >mRNA_A-nodosum_M_contig1197.6.1 ID=mRNA_A-nodosum_M_contig1197.6.1|Name=mRNA_A-nodosum_M_contig1197.6.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=210bp|location=Sequence derived from alignment at A-nodosum_M_contig1197:69780..72702+ (Ascophyllum nodosum dioecious)
CCTTCACCAGTGCACGTGGCTACAATTTTAAAGCTCTTGTGGGCTACGCA
TCGACAGCAGCGCTTGAGTCCCCCTAGCGGAGCGGCGAACGGGCAAGATT
CGTGGGGCTTTTTCAGGGACGCACAGGGCTTTGGACGGCTGGATGTTGGC
TCGCGCACCGGCCTCACCAGCTCAAGGCCTCCCTctaCCACCATGGACCT
CGGTATTTAA back to top
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