mRNA_A-nodosum_M_contig11967.2.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig11967.2.1 vs. uniprot
Match: D7FIT5_ECTSI (YihA3, YihA/EngB-like GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIT5_ECTSI) HSP 1 Score: 241 bits (614), Expect = 1.920e-72 Identity = 125/206 (60.68%), Postives = 147/206 (71.36%), Query Frame = 3
Query: 195 GVGVEGGPKFKHRLPEVALAGPQT------------VNPHWSMRSRDPSPPWPCIYLGPRRLDRSRGFYQIGKKPPVLTLVDLPGYGHAVATKNAMKGWLRMIKEYITTREELCSCCVLVDCTRGFCEEDRSLLRLLSRRNVPFQIVLTKADLLTPELLSTCIGLLRRDLSDVIGDLKSETTTVPFSAVCGTSGAGVNALWRSLDK 776
G +G P F+HRLPEVALAG ++P S W + GFYQ+GKKPPVLT+VDLPGYGHAVAT++A+KGWLRMIKEYITTR+EL CCVLVDCTRGFCEEDR+LL+LL++RN+P+QIVLTKADLLTPELLS C+ LLRRDLSD+ G + +T PFSAVCGTSGAGV LW+ L K
Sbjct: 185 GSASKGWPTFRHRLPEVALAGHTNCGKSTLVNALSGIHPRRGPASTSDRAGWTDLV----------GFYQVGKKPPVLTMVDLPGYGHAVATRHAIKGWLRMIKEYITTRQELIRCCVLVDCTRGFCEEDRALLQLLAKRNIPYQIVLTKADLLTPELLSACVLLLRRDLSDLCG--QEAGSTAPFSAVCGTSGAGVTTLWKDLAK 378
BLAST of mRNA_A-nodosum_M_contig11967.2.1 vs. uniprot
Match: A0A836CEK3_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEK3_9STRA) HSP 1 Score: 159 bits (401), Expect = 6.020e-42 Identity = 90/198 (45.45%), Postives = 113/198 (57.07%), Query Frame = 3
Query: 216 PKFKHRLPEVALAGPQT------------VNPHWSMRSRDPSPPWPCIYLGPRRLDRSRGFYQIGKKPPVLTLVDLPGYGHAVATKNAMKGWLRMIKEYIT-TREELCSCCVLVDCTRGFCEEDRSLLRLLSRRNVPFQIVLTKADLLTPELLSTCIGLLRRDLSDVIGDLKSETTTVPFSAVCGTSGAGVNALWRSL 770
P FKH LPEVALAG ++P + W FYQIGKKPPVLTLVDLPGYGHAVA ++ + W RM K+Y++ R +LC CCVLVD TRG EEDR LL L RR + Q+VLTK DLL PE L+ + + +DL D+ L ++ +P VCG +GAGV ALW ++
Sbjct: 106 PMFKHNLPEVALAGHTNCGKSTLVNALAGIHPRQGLAGVSERAGWTDFV----------SFYQIGKKPPVLTLVDLPGYGHAVANRSMQREWRRMTKDYLSGQRRQLCRCCVLVDATRGLAEEDRILLAHLERRGIEHQLVLTKGDLLLPEQLAQSMAAVTQDLMDIGAKLLAKPPILP---VCGHTGAGVTALWENM 290
BLAST of mRNA_A-nodosum_M_contig11967.2.1 vs. uniprot
Match: A0A4D9CU55_9STRA (EngB-type G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU55_9STRA) HSP 1 Score: 125 bits (315), Expect = 1.700e-29 Identity = 77/178 (43.26%), Postives = 94/178 (52.81%), Query Frame = 3
Query: 180 LRTVYGVGVEGGPKFKHRLPEVALAGPQT------VNPHWSMRSRDPSPPWPCIYLGPRRLDRSRG------FYQIGKKPPVLTLVDLPGYGHAVATKNAMKGWLRMIKEYITTREELCSCCVLVDCTRGFCEEDRSLLRLLSRRNVPFQIVLTKADLLTPELLSTCIGLLRRDLSDV 677
+ G G EG P FKH LPEVA AG VN M R G R+ G FYQ+G+KPPVLTL DLPGYGHAVA+ + W M + Y+ TR L CCVLVDC RG C ED LL+ L R+V ++VLTK DLL L+ L+ RD+ ++
Sbjct: 72 MAAASGRGSEGWPFFKHMLPEVAFAGHSNCGKSSLVNAVAGMVPR----------RGVARVSDRAGWTDAVFFYQLGRKPPVLTLADLPGYGHAVASVQQKRRWREMTQSYLATRRVLSVCCVLVDCVRGLCREDGDLLKALRARDVAVKVVLTKGDLLDEMDLARSHSLVVRDMREM 239
BLAST of mRNA_A-nodosum_M_contig11967.2.1 vs. uniprot
Match: A0A7S3M560_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M560_9STRA) HSP 1 Score: 125 bits (313), Expect = 8.230e-28 Identity = 66/161 (40.99%), Postives = 94/161 (58.39%), Query Frame = 3
Query: 216 PKFKHRLPEVALAGPQTVNPHWSMRSRDPSPPWPCIYLGPRRLDRSRG------FYQIGKKPPVLTLVDLPGYGHAVATKNAMKGWLRMIKEYITTREELCSCCVLVDCTRGFCEEDRSLLRLLSRRNVPFQIVLTKADLLTPELLSTCIGLLRRDLSDVI 680
P FKH LPE+A AG + + P GP ++ G FYQ+GKKPPV+TL DLPGYGHAVA+ + W MI++Y+ R L CC+LVD TRG C+ D+ L+R L++ ++P+ +VLTK DLL L+ C+ ++ DL+ +
Sbjct: 141 PIFKHLLPEIAFAGHSNSGKSTLVNAMIGVLP----SKGPAKVSERAGWTDQICFYQLGKKPPVMTLADLPGYGHAVASAGQRRAWGEMIRDYLQNRTILSRCCILVDSTRGLCKGDKMLVRFLTKYDIPWMVVLTKGDLLDCTSLAQCVLAVQLDLAPFV 297
BLAST of mRNA_A-nodosum_M_contig11967.2.1 vs. uniprot
Match: A0A8J2SNE2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SNE2_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 1.680e-17 Identity = 69/203 (33.99%), Postives = 91/203 (44.83%), Query Frame = 3
Query: 216 PKFKHRLPEVALAGPQTVNPHWSMRSRDPSPPWPCIYLGPRRLDRSRGF------YQIGKKPPVLTLVDLPGYG-HAVATKNAMKGWLRMIKEYITTREELCSCCVLVDCTRGFCEEDRSLLRLLSRRNVPFQIVLTKADLLT-PELLSTCIGLLRRDLSDVIGDLKSETTTVPFSAVCGTSGAGVNALWRSLDKT*APCLMR 800
P KH LPEV L G + + + P P G+ ++G KPP+L +VD PGYG HAVAT + W + +Y TR L + V+VD TRG EDR L +LS + P + L+K DLL P ++ C L+ D T A CGT+GAGV LW L A +R
Sbjct: 107 PPLKHALPEVLLVGAANAGKSTLINALVGAAP--ASKAAPASASDRAGWTSGLEWIRVGAKPPLLYVVDAPGYGAHAVATARERREWTTLCADYARTRATLAAAVVVVDATRGVSTEDRRWLDVLS--SAPTVVALSKCDLLKGPGAVARCARLVEDD------------TQCDVVATCGTTGAGVAELWAKLRALCAAVSVR 293
BLAST of mRNA_A-nodosum_M_contig11967.2.1 vs. uniprot
Match: A0A7I8IBC9_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8IBC9_SPIIN) HSP 1 Score: 90.9 bits (224), Expect = 1.130e-16 Identity = 62/183 (33.88%), Postives = 94/183 (51.37%), Query Frame = 3
Query: 234 LPEVALAGPQTVNPHWSMRSRDPSPPWPCIYLGPRR-LDRSRGFYQIGKKPPVLTLVDLPGYGHAVATKNAMKGWLRMIKEYITTREELCSCCVLVDCTRGFCEEDRSLLRLLSRRNVPFQIVLTKADLLTPELLSTCIGLLRRDLSDVIGDLKSETTTV-PFSAVCGTSGAGVNALWRSLDK 776
LPE+A AG V + + W + + L ++ F+++ K L LVDLPGYG A A W ++KEY++TRE L C+LVD G D L+ L+ R +P+QIVLTK D++ P + + RR + + +LK +++ V P V SGAG+ +L +L K
Sbjct: 187 LPEIAFAGRSNVGKSSLLNALTRQ--WGVVRTSDKPGLTQTINFFRLASK---LCLVDLPGYGFAFAKDEVKDAWEELVKEYVSTREGLTRVCLLVDTKWGMKPRDHELIDLMERSKMPYQIVLTKTDVVFP------VDVARRAMQ-IEENLKPKSSVVNPVMMVSSKSGAGIRSLRTALAK 357
BLAST of mRNA_A-nodosum_M_contig11967.2.1 vs. uniprot
Match: A0A7I8K1E7_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K1E7_SPIIN) HSP 1 Score: 90.9 bits (224), Expect = 1.260e-16 Identity = 62/183 (33.88%), Postives = 94/183 (51.37%), Query Frame = 3
Query: 234 LPEVALAGPQTVNPHWSMRSRDPSPPWPCIYLGPRR-LDRSRGFYQIGKKPPVLTLVDLPGYGHAVATKNAMKGWLRMIKEYITTREELCSCCVLVDCTRGFCEEDRSLLRLLSRRNVPFQIVLTKADLLTPELLSTCIGLLRRDLSDVIGDLKSETTTV-PFSAVCGTSGAGVNALWRSLDK 776
LPE+A AG V + + W + + L ++ F+++ K L LVDLPGYG A A W ++KEY++TRE L C+LVD G D L+ L+ R +P+QIVLTK D++ P + + RR + + +LK +++ V P V SGAG+ +L +L K
Sbjct: 198 LPEIAFAGRSNVGKSSLLNALTRQ--WGVVRTSDKPGLTQTINFFRLASK---LCLVDLPGYGFAFAKDEVKDAWEELVKEYVSTREGLTRVCLLVDTKWGMKPRDHELIDLMERSKMPYQIVLTKTDVVFP------VDVARRAMQ-IEENLKPKSSVVNPVMMVSSKSGAGIRSLRTALAK 368
BLAST of mRNA_A-nodosum_M_contig11967.2.1 vs. uniprot
Match: A0A251VN96_HELAN (Putative GTP binding domain-containing protein n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251VN96_HELAN) HSP 1 Score: 91.7 bits (226), Expect = 1.630e-16 Identity = 62/185 (33.51%), Postives = 92/185 (49.73%), Query Frame = 3
Query: 228 HRLPEVALAGPQTVNPHWSMRSRDPSPPWPCIYLGPRR-LDRSRGFYQIGKKPPVLTLVDLPGYGHAVATKNAMKGWLRMIKEYITTREELCSCCVLVDCTRGFCEEDRSLLRLLSRRNVPFQIVLTKADLLTPELLSTCIGLLRRDLSDVIGDLKSETTTV-PFSAVCGTSGAGVNALWRSLDK 776
H LPE+A AG V + S W + + L ++ F+ +G P L LVDLPGYG A A + + W ++KEY++TREEL C+L+D G D L+ L+ R +QIVLTK DL P + + RR + + LK++ + + P V +GAG+ +L L
Sbjct: 358 HDLPEIAFAGRSNVGKSSLLNSLTRQ--WGVVRTSDKPGLTQTINFFNLG---PKLCLVDLPGYGFAYAKEEVKESWEELVKEYVSTREELKRVCLLIDTKWGMKPRDHELVDLMERSKTKYQIVLTKTDLSFP------VDVARRAMQ-IEESLKTKKSAIQPLMMVSSKTGAGIRSLRTVLSN 530
BLAST of mRNA_A-nodosum_M_contig11967.2.1 vs. uniprot
Match: A0A8J6CDF0_DIALT (EngB-type G domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDF0_DIALT) HSP 1 Score: 87.4 bits (215), Expect = 1.310e-15 Identity = 55/134 (41.04%), Postives = 72/134 (53.73%), Query Frame = 3
Query: 372 GKKPPVLTLVDLPGYGHAVATKNAMKGWLRMIKEYITTREELCSCCVLVDCTRGFCEEDRSLLRLLSRRNVPFQIVLTKADLLTPELLSTCIGLLRRDLSDVIGDLKSETTT-VPFSAVCGTSGAGVNALWRSL 770
G+ P LVD+PGYG AVA + + W R I+ Y++ R L S +LVD RG EDR LL L R P +VLT+ DLL+P L+ C +SD +G+L S VP +V +G GV LW L
Sbjct: 188 GEFAPRFVLVDMPGYGDAVADTSTRRTWRRAIRAYLSHRPALLSVLLLVDAERGLETEDRELLARLVRAGTPHALVLTRCDLLSPLQLARC----HYRVSDELGELNSAAAADVPMISVL--TGVGVRELWERL 315
BLAST of mRNA_A-nodosum_M_contig11967.2.1 vs. uniprot
Match: A0A835BNB0_9POAL (EngB-type G domain-containing protein n=1 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835BNB0_9POAL) HSP 1 Score: 86.7 bits (213), Expect = 1.640e-15 Identity = 61/182 (33.52%), Postives = 88/182 (48.35%), Query Frame = 3
Query: 234 LPEVALAGPQTVNPHWSMRSRDPSPPWPCIYLGPRR-LDRSRGFYQIGKKPPVLTLVDLPGYGHAVATKNAMKGWLRMIKEYITTREELCSCCVLVDCTRGFCEEDRSLLRLLSRRNVPFQIVLTKADLLTPELLSTCIGLLRRDLSDVIGDLKSETTTVPFSAVCGTSGAGVNALWRSLDK 776
LPE+A AG V + + W + + L +S F+++ K L LVDLPGYG A A + + W ++KEY++TR L C+LV RG D L+ L+ R P+QIVLTK DL+ P I + RR + K+++ P V +GAG+ L L K
Sbjct: 125 LPEIAFAGVSNVGKSSLLNALTRQ--WGIVRTSDKPGLTQSINFFRLASK---LCLVDLPGYGFAYAKEEVKESWQELVKEYVSTRVGLERVCLLVHTKRGMKPLDYELVDLMERHKTPYQIVLTKTDLVFP------IDVSRRAMEIQESLKKNKSVVNPVMMVSSKTGAGIRNLRGMLGK 295 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11967.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig11967.2.1 >prot_A-nodosum_M_contig11967.2.1 ID=prot_A-nodosum_M_contig11967.2.1|Name=mRNA_A-nodosum_M_contig11967.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=166bp MRSRDPSPPWPCIYLGPRRLDRSRGFYQIGKKPPVLTLVDLPGYGHAVATback to top mRNA from alignment at A-nodosum_M_contig11967:4957..9274- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig11967.2.1 ID=mRNA_A-nodosum_M_contig11967.2.1|Name=mRNA_A-nodosum_M_contig11967.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4318bp|location=Sequence derived from alignment at A-nodosum_M_contig11967:4957..9274- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig11967:4957..9274- >mRNA_A-nodosum_M_contig11967.2.1 ID=mRNA_A-nodosum_M_contig11967.2.1|Name=mRNA_A-nodosum_M_contig11967.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=498bp|location=Sequence derived from alignment at A-nodosum_M_contig11967:4957..9274- (Ascophyllum nodosum dioecious)back to top |