mRNA_A-nodosum_M_contig1194.19.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1194.19.2 vs. uniprot
Match: A0A6H5JXK5_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK5_9PHAE) HSP 1 Score: 629 bits (1621), Expect = 3.650e-208 Identity = 377/852 (44.25%), Postives = 500/852 (58.69%), Query Frame = 1
Query: 184 GVGLSGGALGQSLSPVTEQTPVGPGCSR--TLSDRSPDTMSQVEAQWRGHQFPFVENADK------TWKHAVETLKAALAEGFELRRLDKNKLYRTSQVGF--AHNRVSIVHVICDQSGRPRPSNRVEAAGLRRRTGSKKIGCRFKVVLNWPQRATGPVVSEASLCLRHLTPESGAAEHERPRAFDHELTAVEIHGQEDLIRLLHESRVETSEIHKTLQVNGKRLGQAGKQIVRNIRQKVEKATLAADTAVFNDAQLFVKEPQIXXXXXXXXXXXXXXXXXXXXXXXXXLQQSGCFLRFKLDDQGRITSIAWAHPKQQQNAMKYHSVIIQGNMSNTCMYKFQLALIVVVDSENHTQLAMQALVSHEHTDDFLFIFEHFKELCSGAHPKVIFTNADKAASAAIEQVYPHSLHKLCIWHTMGEIRTHGGGLGPGVLQAVLGKFQAAAYTPIENAFRGFKTELLALLPPDSKMHAYMKDNIFGPGRVEKWASYVHPGAHTLGIASTQRVESGKSALKQVLQRSGTMVDVNRAILGKVQDDANKTERLAAGGRVKRVHLGTG-TARGRVMDDMLKNFDYVIKAMEHEQCSTYSKTHMKSEVVACLGYDTEVLARGTNEVRHLLAELEADHSEGKLQYDTTC------------SADVTMPTRASVPHFVDLLRDQDVVELVRITPMFSAHGNGHLVALGLGGFFLCTCLKLLVDGLGCRHGIRAMIGRDVG-FDGACLAPRWRKSETPWTMEALAAKPARLVSGSTGHSAGQQATTTAPDVF--THSSANVRGAVYANSVAFGKEVAEICGPIHTIEGHTRVLENVKNYMRQVVAVEVRSQSNASSSRVFRGAASQ 2661
G G GG +G + SP GP S + SP+ ++ ++ + FP +E + T ++AV LKA + G+ L+R +K KLY Q NR + V ++C Q+G PR RV A RR T S+KIGC F+V L W + P+V++ LCL H T SG EHERPRA ++E++ EI + D +R LH SRV+T+EIHKTL+ GKRLGQAGKQ VR + + + A A+ FNDAQL V LQ + FLRFK +D GR+T IAWA Q+ AM+YH +IIQ N NT +YKF LALIVVVD ENHTQ+AMQAL+++E ++ F FIFE FKELC G P V+FT+ D AA AI VYP +L+KLCIWHTM IR HG GL GVL AVLGKF+AAAY + F + E+L +LPP+S M+ YM NIFG R KWASYVHPG HTLGIASTQRVES +A+K V+ R G+M+D+N I+ KVQD KTER + GG+V +V + +A RV + F +++ A+ HE+ ST++ ++++VA L Y + + R LL +L AD ++ KL YDT ++ +TM +R SVPHF DLLR Q+V +VRI+ + GHLVA+G GFFLCTCL+ LV GL C H I+A+ + + F+GA + P WR S TPWTMEALAA+PARL +G+ G PD S + YAN ++ GKE+ + + ++ G RV++ V N+ RQ V VE RS S RVF G SQ
Sbjct: 48 GSGSGGGEVGAASSPAPASAADGPAASPRGAILPTSPEDLATLQGEVENLLFPNLEQGSQQQFGEATIENAVGMLKAKIGRGYPLQRHNKTKLYTRKQEAEHGRRNRWNYVEIVCPQAGSPRARERVANASARRNTSSEKIGCAFEVGLWWAANSPAPIVAKGKLCLTHHTKTSGGKEHERPRAIENEMSVAEIEAKRDFLRELHASRVKTTEIHKTLERVGKRLGQAGKQKVRTMMAQFD-AERQAENGAFNDAQLLVGH----------------------------LQNTEAFLRFKHED-GRMTCIAWASQDQKVLAMRYHKIIIQDNTFNTNVYKFFLALIVVVDKENHTQIAMQALLANERSESFEFIFESFKELCGGGSPGVVFTDCDSAAMLAIANVYPSALNKLCIWHTMENIRDHGRGLAEGVLPAVLGKFKAAAYAQTQEYFLQLRGEILDMLPPESHMYKYMAVNIFGAERAGKWASYVHPGLHTLGIASTQRVESMNAAVKAVVTRKGSMMDLNDGIMAKVQDGMAKTERRSTGGKVNKVSMRQAKSAMSRVTTSHVDQFRFILDALAHEKSSTHAMEDTEAQIVAALTYQDRTVVSDADAARRLLDDLVADPAQAKLVYDTRSGELVDPSHETPDASGITMVSRTSVPHFADLLRGQNVDAVVRISKITPPSEFGHLVAVGSDGFFLCTCLRQLVYGLLCPHVIKALWSQRITRFNGASIGPWWRDSSTPWTMEALAARPARLSTGAAGAHGQVPPLVGNPDAIGSLDSGPKLSAYGYANGLSLGKELGALFKEVGSVAGIHRVVDTVFNFARQQVEVEKRSLRQESRGRVFTGTFSQ 869
BLAST of mRNA_A-nodosum_M_contig1194.19.2 vs. uniprot
Match: A0A6H5JB23_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB23_9PHAE) HSP 1 Score: 542 bits (1396), Expect = 2.930e-178 Identity = 308/634 (48.58%), Postives = 399/634 (62.93%), Query Frame = 1
Query: 556 RTGSKKIGCRFKVVLNWPQRATGPVVSEASL--------CLRHLTPESGAAEHERPRAFDHELTAVEIHGQEDLIRLLHESRVETSEIHKTLQV-NGKRLGQAGKQIVRNIRQKVEKATLAADTAVFNDAQLFVKEPQIXXXXXXXXXXXXXXXXXXXXXXXXXLQQSGCFLRFKLDDQGRITSIAWAHPKQQQNAMKYHSVIIQGNMSNTCMYKFQLALIVVVDSENHTQLAMQALVSHEHTDDFLFIFEHFKELCSGAHPKVIFTNADKAASAAIEQVYPHSLHKLCIWHTMGEIRTHGGGLGPGVLQAVLGKFQAAAYTPIENAFRGFKTELLALLPPDSKMHAYMKDNIFGPGRVEKWASYVHPGAHTLGIASTQRVESGKSALKQVLQRSGTMVDVNRAILGKVQDDANKTERLAAGGRVKRVHLGTGTARGRVMDDMLKNFDYVIKAMEHEQCSTYSKTHMKSEVVACLGYDTEVLARGTNEVRHLLAELEADHSEGKLQYDT------------TCSADVTMPTRASVPHFVDLLRDQDVVELVRITPMFSAHGNGHLVALGLGGFFLCTCLKLLVDGLGCRHGIRAMIGRDVG-FDGACLAPRWRKSETPWTMEALAAKPARLVSG 2391
R ++GC FK VL W R PVV +ASL CL H TP S EH P FD+E++ +I+ D I L +S V+T ++HKT+Q +GKRLG+ GK +VR I +K L FNDAQ F+ LQ+S L F+ D+Q RITSIAWA Q+ A+++HSVII NT YKF LAL+VVVD ENH+Q+ MQAL+S+E + F F++E KELC G PKV F++ D A + AIE V+P ++HKLCIWHT G IR HGGGLG GVL V+ KF+ AA+ F KTELLA LP +SKM+ YM +NIFG GRVEKWAS VHPG HTLGI STQRVE+ SA+K+++ RSGTMV++NRA++GKVQDDANKT+R + GGR+ R L + ++ V +LK+F +V+ A++HE+ ST++ +++VVA LGY+ L RG +E R LL EL AD + KL YDT T +A V+M +R SVPHF LLRDQ+V +VR++ + GHLVALG GFFLCTCL+ L GL C HG++AM V F+GA ++PRWR+SETPW M LAAKPA L +G
Sbjct: 84 RVSKSRVGCNFKTVLWWGARQDAPVVGKASLSALAEGGMCLTHHTPTSNGKEHAPPTTFDNEMSRQDIYEMSDFIIDLADSGVKTVDLHKTVQQKSGKRLGREGKALVRCIVEK----HLEDSREAFNDAQEFLAH----------------------------LQRSKAHLWFRADNQSRITSIAWASDVQKAAAVRFHSVIITDTTFNTNRYKFSLALVVVVDHENHSQIVMQALLSNERQESFQFVYESLKELCEGGSPKVCFSDNDAAETNAIELVFPGTVHKLCIWHTYGNIREHGGGLGEGVLSEVIRKFRKAAFAQTVEYFLQAKTELLAFLPRESKMYNYMANNIFGKGRVEKWASCVHPGLHTLGICSTQRVEAMNSAVKRLVTRSGTMVELNRALMGKVQDDANKTKRKSDGGRLPRAPLSSMSSMENVKRGLLKHFSFVVDAVKHERSSTHAIKDTEAQVVAALGYNATCLVRGEDEARLLLDELVADADKAKLWYDTSSGDLIDPLQATTGAAGVSMVSRTSVPHFAHLLRDQNVNSVVRVSMITPPSEFGHLVALGPDGFFLCTCLRQLEHGLLCPHGLKAMWTEGVDRFNGATISPRWRESETPWLMADLAAKPATLSAG 685
BLAST of mRNA_A-nodosum_M_contig1194.19.2 vs. uniprot
Match: A0A6H5JDT4_9PHAE (MULE domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDT4_9PHAE) HSP 1 Score: 504 bits (1299), Expect = 7.490e-163 Identity = 288/678 (42.48%), Postives = 403/678 (59.44%), Query Frame = 1
Query: 661 LTPESGAAEHERPRAFDHELTAVEIHGQEDLIRLLHESRVETSEIHKTLQVNGKRLGQAGKQIVRNIRQKVEKATLAADTAVFNDAQLFVKEPQIXXXXXXXXXXXXXXXXXXXXXXXXXLQQSGCFLRFKLDDQGRITSIAWAHPKQQQNAMKYHSVIIQGNMSNTCMYKFQLALIVVVDSENHTQLAMQALVSHEHTDDFLFIFEHFKELCSGAHPKVIFTNADKAASAAIEQVYPHSLHKLCIWHTMGEIRTHGGGLGPGVLQAVLGKFQAAAYTPIENAFRGFKTELLALLPPDSKMHAYMKDNIFGPGRVEKWASYVHPGAHTLGIASTQRVESGKSALKQVLQRSGTMVDVNRAILGKVQDDANKTERLAAGGRVKRVHLGTGTARGRVMDDMLKN-FDYVIKAMEHEQCSTYSKTHMKSEVVACLGYDTEVLARGTNEVRHLLAELEADHSEGKLQYDTTCS-------------ADVTMPTRASVPHFVDLLRDQDVVELVRITPMFSAHGNGHLVALGLGGFFLCTCLKLLVDGLGCRHGIRAMIGRDVG-FDGACLAPRWRKSETPWTMEALAAKPARLVSGSTGHSAGQQATTTAPDVFTHSSANVRGAVYANSVAFGKEVAEICGPIHTIEGHTRVLENVKNYMRQVVAVEVRSQSNASSSRVFRG 2649
+ P S EH+ PR F++E+T ++ + I+ + + V+T+E++K L GKRLG+ G+Q+VR +R + +K ++ + NDAQ + + L+Q G F R+KLDD+ R+T +AWAH +Q++N KY V++ NT Y +LA IVVVD ENHTQ+AMQAL+ E + F+F+ E FKEL G+ PKVIFT+ D++ +AI QV+P +L+KLC WH ++ HG GL G+LQ +L KF+AAAY P AF KTELL++L P+S ++ YM IF PGR KWAS+VHPG HTLGIASTQRVE A+K+++ R+G + D+ RA+LGKVQDDA +T+R + G KRV L + + L+ F ++ A+ HE+CST++K + ACLGY T+++A G +VR +L D ++ L DT A V + +RA V HF LLRDQ V +LVR+ + HLVALG GFFLCTCL+ LV GL C HG++AM F+GA +APRWR+S TPWT+E LAAKPA L G+ D +HS NV+ A YAN FGK++ + I T+EG RVLE+ K + +Q + VE RSQ AS+++VF G
Sbjct: 1 MYPGSEGTEHDPPRVFENEITREDLEAESAHIKKMCDKGVKTAEVYKYLTDTGKRLGEKGRQMVRLMRVQFDKDKTSSRGGL-NDAQQLLHQ----------------------------LEQDGAFKRYKLDDENRLTCLAWAHEEQRRNTEKYFPVVVSDTTFNTSKYNHKLAFIVVVDKENHTQIAMQALLDTERHESFVFLMESFKELIRGSSPKVIFTDTDQSEMSAIAQVFPGALNKLCYWHKEQNVKAHGKGLPGGILQGILRKFKAAAYAPTLEAFVEIKTELLSMLDPESGVYKYMLGEIFNPGRAGKWASFVHPGLHTLGIASTQRVEGTNCAVKKLVTRTGDLADLERALLGKVQDDAIRTQRRSEVGNTKRVSLSRNMSPAENVKQNLRGYFAFITAALTHERCSTHAKEDTGVMIDACLGYSTKIVASGETDVRRILQMFVDDPTKVNLMLDTNSGEFIDPAEPTAVAPAGVHLASRAPVSHFAGLLRDQAVDKLVRVA-LLQREEFCHLVALGPDGFFLCTCLRPLVYGLLCPHGLKAMFDTGANKFNGASIAPRWRESSTPWTLEPLAAKPAMLDPGAAECPVELPPFNVTTDDISHSGTNVKAAAYANGTNFGKDMGVLLRQITTLEGIDRVLESTKIFFKQQLEVEKRSQRQASTTQVFTG 648
BLAST of mRNA_A-nodosum_M_contig1194.19.2 vs. uniprot
Match: A0A6H5KQ14_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ14_9PHAE) HSP 1 Score: 481 bits (1239), Expect = 2.250e-157 Identity = 277/548 (50.55%), Postives = 358/548 (65.33%), Query Frame = 1
Query: 1042 LRFKLDDQGRITSIAWAHPKQQQNAMKYHSVIIQGNMSNTCMYKFQLALIVVVDSENHTQLAMQALVSHEHTDDFLFIFEHFKELCSGAHPKVIFTNADKAASAAIEQVYPHSLHKLCIWHTMGEIRTHGGGLGPGVLQAVLGKFQAAAYTPIENAFRGFKTELLALLPPDSKMHAYMKDNIFGPGRVEKWASYVHPGAHTLGIASTQRVESGKSALKQVLQRSGTMVDVNRAILGKVQDDANKTERLAAGGRVKRVHLGTGTARGRVMDDMLKNFDYVIKAMEHEQCSTYSKTHMKSEVVACLGYDTEVLARGTNEVRHLLAELEADHSEGKLQYDTTCS-------------ADVTMPTRASVPHFVDLLRDQDVVELVRITPMFSAHGN-GHLVALGLGGFFLCTCLKLLVDGLGCRHGIRA---MIGRD--VGFDGACLAPRWRKSETPWTMEALAAKPARLVSGSTGHSAGQQATTTAPDVFTHSSANVRGAV----YANSVAFGKEVAEICGPIHTIEGHTRVLENVKNYMRQVVAVEVRSQ 2616
++FK+D+ RI IAWA+P+Q+QNA +YH VI+Q N NT +YKF LALIVVVD EN+TQ+AMQAL+S+E ++DF+F+ E FKELC G P+V FT+ D+ A AI +V+P +L+KLCIW+ M IR HG GL G LQ+VL F+AAA+ F +KTEL LLP +S MH YM+ IFG GRVEKWAS VHPG H LGIASTQR E+ +ALK V+ R+G MVD+NRA+L KVQDDA KT+ GG V RV + + + V L++F +V +AMEHE+CS ++K ++ ++ A GY+ +A G + VR LLAEL AD ++ L YD CS A VTM TR SV HF DLL DQ+V ELVRIT +F+A GHLVALG GFFLCTCL++LV GL C H I+A M G D F+ AC++PRWR SET WTM LAAKPARL + AG V ++SSA V V YA++V++GK++ I + G RVLE+ ++ Q + VE RSQ
Sbjct: 1 MKFKMDEHNRIKCIAWAYPEQEQNARRYHRVILQDNTFNTNVYKFFLALIVVVDMENYTQIAMQALLSNERSEDFIFLMETFKELCGGLMPQVAFTDCDQGAMGAIAEVFPGALNKLCIWYAMQNIRKHGKGLADGALQSVLQNFKAAAFAARVEDFVRYKTELPRLLPQESAMHKYMEGTIFGAGRVEKWASCVHPGLHKLGIASTQRCEATFTALKLVVTRNGNMVDLNRALLSKVQDDAIKTQSRNKGGAVTRVPVRKVSPQESVKASFLRHFSFVFEAMEHERCSRHAKEDVEEQIFAAFGYEAVTVATGQDAVRTLLAELVADPTKANLAYDI-CSGEFIDPGGEAAGPAHVTMATRTSVAHFADLLHDQNVEELVRIT-IFNAQSEFGHLVALGPDGFFLCTCLRMLVYGLPCPHCIKALAHMRGNDKVFSFNAACISPRWRDSETSWTMAHLAAKPARLATAD-AELAGLPVIDPNSVVVSYSSATVAATVAAAGYADAVSYGKKMGGKLRGITSSAGIQRVLESTYDFFLQQLEVEKRSQ 545
BLAST of mRNA_A-nodosum_M_contig1194.19.2 vs. uniprot
Match: A0A6H5KGZ7_9PHAE (MULE domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGZ7_9PHAE) HSP 1 Score: 443 bits (1140), Expect = 4.150e-143 Identity = 258/542 (47.60%), Postives = 328/542 (60.52%), Query Frame = 1
Query: 1027 QSGCFLRFKLDDQGRITSIAWAHPKQQQNAMKYHSVIIQGNMSNTCMYKFQLALIVVVDSENHTQLAMQALVSHEHTDDFLFIFEHFKELCSGAHPK-VIFTNADKAASAAIEQVYPHSLHKLCIWHTMGEIRTHGGGLGPGVLQAVLGKFQAAAYTPIENAFRGFKTELLALLPPDSKMHAYMKDNIFGPGRVEKWASYVHPGAHTLGIASTQRVESGKSALKQVLQRSGTMVDVNRAILGKVQDDANKTERLAAGGRVKRVHLGTGTARGRVMDDMLKNFDYVIKAMEHEQCSTYSKTHMKSEVVACLGYDTEVLARGTNEVRHLLAELEADHSEGKLQYDTTCSADVTMPTRASVPHFVDLLRDQDVVELVRITPMFSAHGNGHLVALGLGGFFLCTCLKLLVDGLGCRHGIRAMIGRDVGFDGACLAPRWRKSETPWTMEALAAKPARLVSGSTGHSAGQQATTTAPDVFTHSSANVRGAVYANSVAFGKEVAEICGPIHTIEGHTRVLENVKNYMRQVVAVEVRSQSNASSSRVFRG 2649
+ GC++RF LD+ GRI IAWA +Q+ NA++YHS+IIQ N NT YK+ LAL V VD EN+T +AMQAL+++E T+DF F+F F+EL GA P+ VIFT+AD A AAI++ P S KLC +H +R HG GLG GVL AV+ +F A E K +L LL P S M+ YM D +F P V +WA Y HPG TLGI+STQRVES +ALK + RSGTMVDVNRAI GKV DD T + T M E +A +GY E LA G +V+ LLA+L A+ + L Y+TT S DVT+ TR SV F +LLRDQ + LVR+T + S + HLVALG GFFL TCL++LV+GLGC H +R + D+GF GAC+APRWR PWTM LAAKPA L + +TG A P VF+HS VR + +A+ AFGK +A I I I G +RVL+N+KN RQ+V VE+RSQ+NAS+SRVF+G
Sbjct: 2 KEGCWMRFTLDENGRINRIAWALDEQKTNALRYHSLIIQDNTFNTNQYKYHLALKVAVDKENYTHIAMQALLANERTEDFEFLFREFRELIEGAQPEYVIFTDADAATMAAIDKESPASRGKLCQFHMGENMRKHGKGLGEGVLAAVIRQFHKAGNAQTEE----HKEDLFKLLHPGSHMYTYMTDYVFVPKWVHRWAMYGHPGLPTLGISSTQRVESANAALKPAMSRSGTMVDVNRAIRGKVTDD------------------------------------------------TKNDTDMSDEALAAMGYKAETLATGNCDVQRLLADLVANPAGAGLLYETT-SGDVTLTTRTSVKFFAELLRDQVLERLVRVTNVGSQTNHCHLVALGPDGFFLYTCLRILVEGLGCGHALRTIHDADLGFTGACIAPRWRDGIMPWTMAPLAAKPAVLATTATGVPGEMPAPPADPGVFSHSKTTVRASAWASCCAFGKRLATITAGIDNIPGISRVLDNLKNQARQMVEVELRSQNNASTSRVFKG 490
BLAST of mRNA_A-nodosum_M_contig1194.19.2 vs. uniprot
Match: D7G8C7_ECTSI (Putative far-red impaired response protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C7_ECTSI) HSP 1 Score: 439 bits (1129), Expect = 1.580e-139 Identity = 248/513 (48.34%), Postives = 315/513 (61.40%), Query Frame = 1
Query: 850 VRNIRQKVEKATLAADTAVFNDAQLFVKEPQIXXXXXXXXXXXXXXXXXXXXXXXXXLQQSGCFLRFKLDDQGRITSIAWAHPKQQQNAMKYHSVIIQGNMSNTCMYKFQLALIVVVDSENHTQLAMQALVSHEHTDDFLFIFEHFKELCSGAHPKVIFTNADKAASAAIEQVYPHSLHKLCIWHTMGEIRTHGGGLGPGVLQAVLGKFQAAAYTPIENAFRGFKTELLALLPPDSKMHAYMKDNIFGPG-----------------------RVEKWASYVHPGAHTLGIASTQRVESGKSALKQVLQRSGTMVDVNRAILGKVQDDANKTERLAAGGRVKRVHLGTGTARGRVMDDMLKNFDYVIKAMEHEQCSTYSKTHMKSEVVACLGYDTEVLARGTNEVRHLLAELEADHSEGKLQYDTTC------------SADVTMPTRASVPHFVDLLRDQDVVELVRITPMFSAHGNGHLVALGLGGFFLCTCLKLLVDGLGCRHGIRAMIG 2283
VR++R + A AD VFNDAQLFV LQQS F+RFK D+QGRITSIAWA+ +Q+ NA++YHSVI+Q N NT +YKF LALIVVVD ENH+Q+AMQAL+S E ++ F F+FE FK+LC G P+V+FT+ D AA AI +VYP +L+KLCIWHTMG IR HGGGL GVL VL F+AAAY E F K LL LLPP+SKM+ YM+ NIFG G R KWASYVHPG HTLGIASTQRVES +A+K+++ R G MVD+ RA+LGKVQDD N+T+R GG V RV + + L+ F++V+ A+++EQCS ++ +++++ L Y+ + R R L EL AD ++ L YDT +A V+M +R SVPHF +LLRDQ+V +VRITPM +A GHLVALG GFFLCTCL+ LV GL C H I+ G
Sbjct: 3 VRSMRDAFD-AERKADNGVFNDAQLFVSH----------------------------LQQSEAFMRFKADEQGRITSIAWAYQQQKYNAVRYHSVIVQDNTFNTNIYKFHLALIVVVDKENHSQIAMQALLSDERSESFEFVFESFKQLCEGGTPEVVFTDCDAAAMLAIAKVYPSALNKLCIWHTMGNIREHGGGLEKGVLGQVLQLFKAAAYAQTEEYFLQCKGALLDLLPPESKMYEYMEKNIFGTGFRQLVTSSVSCPLSLSRPVTCDRRAGKWASYVHPGLHTLGIASTQRVESMNAAVKKLVTRKGDMVDLGRALLGKVQDDINRTQRRNLGGTVARVAVQGHSYVESFRTKHLRTFNFVLNAVKYEQCSQHATEDTEAQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAAGVSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIKGDAG 486
BLAST of mRNA_A-nodosum_M_contig1194.19.2 vs. uniprot
Match: A0A6H5K1S8_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S8_9PHAE) HSP 1 Score: 416 bits (1068), Expect = 7.760e-130 Identity = 230/481 (47.82%), Postives = 305/481 (63.41%), Query Frame = 1
Query: 1228 MQALVSHEHTDDFLFIFEHFKELCSGAHPKVIFTNADKAASAAIEQVYPHSLHKLCIWHTMGEIRTHGGGLGPGVLQAVLGKFQAAAYTPIENAFRGFKTELLALLPPDSKMHAYMKDNIFGPGRVEKWASYVHPGAHTLGIASTQRVESGKSALKQVLQRSGTMVDVNRAILGKVQDDANKTERLAAGGRVKRVHLGTGTARGRVMDDMLKNFDYVIKAMEHEQCSTYSKTHMKSEVVACLGYDTEVLARGTNEVRHLLAELEADHSEGKLQYDTTCSADVTMPTRASVPHFVDLLRDQDVVELVRITPMFSAHGNG-HLVALGLGGFFLCTCLKLLVDGLGCRHGIRAMIGRDVGFDGACLAPRWRKSETPWTMEALAAKPA-RLVSGSTGHSAGQQATTTAPDVFTHSSANVRGAVYANSVAFGKEVAEICGPIHTIEGHTRVLENVKNYMRQVVAVEVRSQSNASSSRVFRGAASQS 2664
MQAL+S E T+DF F+F F+ L GA P+VIFT+ D AA A IE+ P S K+C++H +R HG GLG GVL AV+G F AAY+ E F K EL LL P M+ Y+ + +F P V++WA YVHPG TLGI+STQRVES ALK + R+GTMVDV+RAI GKV DD NKT+ GG ++RV + T ++ G V D L +F +V M H CS ++ M E +A +GY E LA G ++V LL + A+ + L Y+T DVT+ TR S+ F +LL+DQ + LVR++ F LVALG GFFLCTCL++LVDGLGCRH +RAM G D+GF GAC+APRWR PWTM LAAKPA + + G A +A F+HS + VR + +A+ A+GKE+A I PI + G TR+L+N+ + RQ+V VE+RSQ NAS++RVF+G ++S
Sbjct: 1 MQALLSSERTEDFEFLFREFRSLIGGAQPEVIFTDNDAAAMAGIEKESPASRGKVCVFHMDENLRKHGKGLGEGVLAAVIGLFHKAAYSQTEEMFLQRKEELFKLLDPGRHMYTYITECVFSPKWVQRWAKYVHPGLPTLGISSTQRVESTNGALKPAMTRTGTMVDVHRAISGKVSDDVNKTKTQTTGGPIQRVRVPTQSSFGDVRDSWLADFKFVHDGMLHAGCSAFAMKDMSDEALAAVGYSAETLATGNDDVHRLLTDFVANPPQAGLLYETDVG-DVTLATRTSIEFFAELLKDQVLDRLVRVSRSFGDQTKYCQLVALGPDGFFLCTCLRILVDGLGCRHALRAMRGTDLGFTGACIAPRWRDGIMPWTMGRLAAKPAVAATTDAGGEMPPPPADASAFSRFSHSKSTVRASAWASCCAWGKELATITAPIDNVAGITRILDNLTIHARQLVDVELRSQHNASTTRVFKGVVTRS 480
BLAST of mRNA_A-nodosum_M_contig1194.19.2 vs. uniprot
Match: A0A6H5K2Y1_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Y1_9PHAE) HSP 1 Score: 412 bits (1058), Expect = 3.450e-126 Identity = 274/708 (38.70%), Postives = 355/708 (50.14%), Query Frame = 1
Query: 652 LRHLTPESGAAEHERPRAFDHELTAVEIHGQEDLIRLLHESRVETSEIHKTLQVNGKRLGQAGKQIVRNIRQKVEKATLAADTAVFNDAQLFVKEPQIXXXXXXXXXXXXXXXXXXXXXXXXXLQQSGCFLRFKLDDQGRITSIAWAHPKQQQNAMKYHSVIIQGNMSNT----------------------------------------CMYKFQLALIVVVDSENHTQLAMQALVSHEHTDDFLFIFEHFKELCSGAHPKVIFTNADKAASAAIEQVYPHSLHKLCIWHTMGEIRTHGGGLGPGVLQAVLGKFQAAAYTPIENAFRGFKTELLALLPPDSKMHAYMKDNIFGPGRVEKWASYVHPGAHTLGIASTQRVESGKSALKQVLQRSGTMVDVNRAILGKVQDDANKTERLAAGGRVKRVHLGTGTARGRVMDDMLKNFDYVIKAMEHEQCSTYSKTHMKSEVVACLGYDTEVLARGTNEVRHLLAELEADHSEGKLQYDT-TCSADVTMPTRASVPHFVDLLRDQDVVELVRITPMFSAHGNG-HLVALGLGGFFLCTCLKLLVDGLGCRHGIRAMIGRDVGFDGACLAPRWRKSETPWTMEALAAKPARLVSGSTGHSAGQQATTTAPDVFTHSSANVRGAVYANSVAFGKEVAEICGPIHTIEGHTRVLENVKNYMRQVVAVEVRSQSNASSSRVFRG 2649
+R + E G+ EHERPR +E+T + QEDLIRL++ +T IHKT++ +G LG GKQ Q C++RF +D++G I +AWA Q+ A++Y +IIQ N NT YK+ LALIVVVD EN+T + QAL++ E T+DF F+F F+E+ GA P+VIFT+AD AA AAI++ P S H+LC++H +R HG GLG GVL V+ F AA+ P E A K ++ LL P S M+ YM D++FGP V +WA + HPG TLGI STQRVES SALK +QRSGTMVDV+RAI KVQ DANKT S Y+ M E +A +GY LA G + V+ LLA+L A+ + L Y T AD+T+ TR S+ F +LLRDQ V LVR+T F + HLVALG GFFLCTCL++ DGLGCRH +RA+ DVGF GA +A RWR P + A A P+ VFT S A VR + +A+ AFGKE+A I I +I TRVLEN+K RQ+V VE+RSQ AS+SRVF+G
Sbjct: 73 VRSPSSEDGSVEHERPREMANEMTHEMVQEQEDLIRLMYFQHNDTRAIHKTVERDGMVLGPRGKQ------------------------------------------------------------QERCWMRFTMDEKGCINRVAWALESQRTTALRYFPLIIQDNTFNTNKFDSAFTYETKASLSYRFENGFVKTCACPLCAQFLGYAPTRYKYHLALIVVVDKENYTHIVFQALLASERTEDFDFLFRAFREMIGGAQPQVIFTDADAAAMAAIQKECPWSRHQLCLFHLDENLRKHGKGLGEGVLAGVIRMFHKAAFAPTEEA----KQDVFNLLAPGSDMYTYMADSVFGPKWVHRWAKFGHPGLPTLGITSTQRVESTNSALKPAMQRSGTMVDVHRAISKKVQSDANKTT------------------------------------------SAYAMKDMSDEALAAMGYTAHTLATGNDNVQRLLADLGANPAGAGLLYGTGEEGADITLTTRTSIKFFAELLRDQVVDRLVRVTNTFGSQTQYCHLVALGPDGFFLCTCLRIPTDGLGCRHALRALKDGDVGFTGASIANRWRAG-LPGELPAAPADPS---------------------VFTCSKATVRSSAWASCCAFGKELASITSTIDSIPAITRVLENLKIQARQMVDVELRSQHEASTSRVFKG 652
BLAST of mRNA_A-nodosum_M_contig1194.19.2 vs. uniprot
Match: A0A6H5JYV9_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYV9_9PHAE) HSP 1 Score: 391 bits (1005), Expect = 6.450e-119 Identity = 259/693 (37.37%), Postives = 361/693 (52.09%), Query Frame = 1
Query: 631 VSEASLCLRHLTPESGAAEHERPRAFDHELTAVEIHGQEDLIRLLHESRVETSEIHKTLQVNGKRLGQAGKQIVRNIRQKVEKATLAADTAVFNDAQLFVKEPQIXXXXXXXXXXXXXXXXXXXXXXXXXLQQSGCFLRFKLDDQGRITSIAWAHPKQQQNAMKYHSVIIQGNMSNTCMYKFQLALIVVVDSENHTQLAMQALVSHEHTDDFLFIFEHFKELCSGAHPKVIFTNADKAASAAIEQVYPHSLHKLCIWHTMGEIRTHGGGLGPGVLQAVLGKFQAAAYT--PIENA--------------FRGFKTELLALLPPDSKMH-AYMKDNIFGPGRVEKWASYVHPGAHTLGIASTQRVESGKSALKQVLQRSGTMVDVNRAILGKVQDDANKTERLAAGGRVKRVHLGTGTARGRVMDDMLKNFDYVIKAMEHEQCSTYSKTHMKSEVVACLGYDTEVLARGTNEVRHLLAELEADHSEGKLQYDTTCSA-DVTMPTRASVPHFVDLLRDQDVVELVRITPMFSAHGN--GHLVALGLGGFFLCTCLKLLVDGLGCRHGIRAMIGRDVGFDGACLAPRWRKSETPWTMEALAAKPARLVSGSTGHSAGQQATTTAPDVFTHSSANVRGAVYANSVAFGKEVAEICGPIHTIEGHTRVLENVKNYMRQVVAVEVRSQSNASSSRVFRG 2649
+++ + L H GA EHE R F++E+T E+ + LI LH +V+ +I K LQ KRLG GK++VR + E+ + AAD DA+ F+ + Q+ ++RF+LD+ R+ IAWA +QQ NA++Y S+IIQ N NT YK+ LALIVVVD+EN+TQ+AMQAL+++E T+DF F+F F+ELC G P+VIFT+AD+AA AI++ P S KLC++H + HG GL GVL V G F AAA P+ + F K L L PDS M+ YM D +F P ++ SG +AL+ V+ ++ + ++ V + L+ FDYV +AM H +CS Y+ M +E +A + YD E+L G ++V +A + +D + L YD T D T TR SV F +LL DQ + +LVRIT FS G GHLVALG GF LCTCL+LLV GLGCRHG+RA+ D G +G C+A RWR S PWTME L AK A + + G P VF+HS R + +A+ VAFGKE+A + + I RVL N+ NY +Q++ VE RSQ A+++R+F G
Sbjct: 1 MAQTGMWLHHCVGIIGA-EHEPRRTFENEMTQEEVEKETGLILRLHFQKVDKPQIFKALQTPTKRLGAKGKEMVRTVISGAERES-AADV---EDARQFLGK----------------------------FQKEDVWVRFQLDEDRRVARIAWALDEQQGNALRYSSIIIQDNTFNTNEYKYHLALIVVVDNENYTQIAMQALLANERTEDFKFLFRVFRELCEGVQPEVIFTDADQAAMTAIDEECPASHQKLCLFHMDENLMKHGRGLEQGVLAGVEGMFHAAALLLRPVMSPRGLACSAPFSAWQMFLKHKANLFKQLKPDSHMYNKYMADFVFEP----------------------RQAVSGTAALQTVMPKAASPLET-------------------------------------VTNSWLEGFDYVRRAMRHVECSAYAMKDMSTEALAAMAYDVEILGTGNDDVHREIARMVSDPAIAGLSYDPTSGGGDGTWTTRTSVKFFAELLEDQVLDKLVRITRSFSDGGPNYGHLVALGPDGFVLCTCLRLLVYGLGCRHGLRAVRDTDFGLNGGCIASRWRDSTQPWTMEHLTAKRAAPANTAAGVPGDMPPAPMDPGVFSHSKPTARASNWASCVAFGKELASLMTDVDAIAPCQRVLNNLTNYAKQLIEVEARSQHEATTNRIFTG 601
BLAST of mRNA_A-nodosum_M_contig1194.19.2 vs. uniprot
Match: A0A6H5KFX3_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFX3_9PHAE) HSP 1 Score: 384 bits (986), Expect = 2.050e-117 Identity = 238/568 (41.90%), Postives = 315/568 (55.46%), Query Frame = 1
Query: 1024 QQSGCFLRFKLDDQGRITSIAWAHPKQQQNAMKYHSVIIQGNMSNTCMYKFQLALIVVVDSENHTQLAMQALVSHEHTDDFLFIFEHFKELCSGAHPKVIFTNADKA--------------------ASAAIEQVYPHSLHKLCIWHTMGEIRTHGGGLGPGVLQAVLGKFQAAAYTPIENAFRGFKTELLALLPPDSKMHAYMKDNIFGPGRVEKWASYVHPGAHTLGIASTQRVESGKSALKQVLQRSGTMVDVNRAILGKVQDD---ANKTERLAAGGRVKRVHLGTGTARGRVMDDMLKNFDYVIKAMEHEQCSTYSKTHMKSEVVACLGYDTEVLARGTNEVRHLLAELEADHSEGKLQYDTTCSA-DVTMPTRASVPHFVDLLRDQDVVELVRITPMFSAHGN--GHLVALGLGGFFLCTCLKLLVDGLGCRHGIRAMIGRDVGFDGACLAPRWRKSETPWTMEALAAKPARLVSGSTGHSAGQQATTTAPDVFTHSSANVRGAVYANSVAFGKEVAEICGPIHTIEGHTRVLENVKNYMRQVVAVEVRSQSNASSSRVFRG 2649
Q ++RF+LD+ R+ IAWA +QQ+NA++Y S+IIQ N NT YK+ LALIVVVD+EN+TQ+AMQAL+++E T+DF F+F F LC G P+ A AI++ P S KLC++H + HG GL GVL V G AAAY E F K LL L DS M+ YM D +F P + G L +RVES ALK + RSG+MVDV+ I+GKVQ A +T++ A+ L T V + L+ FDYV +AM H +CS Y+ M +E +A + YD E+L G +V +A + +D + L YD T D T TR SV F +LL DQ + +LVRIT FS G GHLVALG GF LCTCL+LLV GLGCRHG+RA+ D GF+G C+A RWR S PWTME LAAK A + + G T P VF+HS R + +A+ VAFGKE+A + + + RVL N+ NY +Q++ VE RSQ A+++R+F G
Sbjct: 3 QTEDVWVRFQLDEDRRVARIAWALDEQQRNALRYSSIIIQDNTFNTNEYKYHLALIVVVDNENYTQIAMQALLANERTEDFKFLFRVFGGLCEGLQPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMTAIDEECPASHQKLCLFHMDENLMKHGRGLEQGVLAGVEGMIHAAAYAQTEEMFLKHKANLLKQLKLDSHMYKYMADFVFEPRQAVS-------GTAALQTVMPKRVESINGALKTAMHRSGSMVDVHDTIVGKVQXPWLPACRTQQAAS-------PLET------VTNSWLEGFDYVRRAMRHVECSAYAMKDMSTEALAAMAYDVEILTTGNEDVHREIARIVSDPAIAGLSYDPTSGGGDGTWTTRTSVKFFAELLEDQVLDKLVRITRSFSDGGPNYGHLVALGPDGFVLCTCLRLLVYGLGCRHGLRAVRDTDFGFNGGCIASRWRDSTQPWTMEHLAAKRAAPANTAAGVPGDMPPAPTDPGVFSHSKPTARVSNWASCVAFGKELASLMTDVDAVAPCQRVLNNLTNYAKQLIEVEARSQHEATTNRIFTG 550 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1194.19.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1194.19.2 >prot_A-nodosum_M_contig1194.19.2 ID=prot_A-nodosum_M_contig1194.19.2|Name=mRNA_A-nodosum_M_contig1194.19.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=903bp STESQNTSPAVQQSTPTAKMAETPAALDSALEATTAADARFPSAATDTEIback to top mRNA from alignment at A-nodosum_M_contig1194:178865..188938- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1194.19.2 ID=mRNA_A-nodosum_M_contig1194.19.2|Name=mRNA_A-nodosum_M_contig1194.19.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=10074bp|location=Sequence derived from alignment at A-nodosum_M_contig1194:178865..188938- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1194:178865..188938- >mRNA_A-nodosum_M_contig1194.19.2 ID=mRNA_A-nodosum_M_contig1194.19.2|Name=mRNA_A-nodosum_M_contig1194.19.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=2709bp|location=Sequence derived from alignment at A-nodosum_M_contig1194:178865..188938- (Ascophyllum nodosum dioecious)back to top |