mRNA_A-nodosum_M_contig1190.17.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1190.17.2 vs. uniprot
Match: A0A6H5L442_9PHAE (Peptidase_S26 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L442_9PHAE) HSP 1 Score: 395 bits (1015), Expect = 3.100e-124 Identity = 247/470 (52.55%), Postives = 299/470 (63.62%), Query Frame = 2
Query: 860 LRXRRRSGE----RGSKSADVLMMTDERSGGRQLGDILAPEDESGDASSARSSAASGGISIEPPSFLKRLFSVPKNIRRTTAVGDVVVPVIGARDGWGGIRQGLVNRGIFPGVEYRVLEVTT-----------STESGSERS---------------------------------------LPSARDAPEGAFENGDLTFTMRPVYPLVARLER-EWPVRVPAREFPVMLTPFAYNAATAWASLTTSLSVLVVCFVTSQALTLSVIPSRSMEPTLQVGDVVLVEKVSRAAFIRREDIVFFRPPPALREVVASAGGILNARDLFVKRVAALSGDVVSVSADGIVEVESARKTGSVRGSAQPGRGLEGAASVAEVEPSDDEGRGAIHPRISTNLVEEASPRTSSAATVN--SGVLKRIRVAEKRRLPPGTIFVLGDNAEVSMDSRVWGELDDGQIVGHALFRVFPLRAFGLL 2098
LR RRR G R +++ + M+ ++R R LGD+L PED G A A G +S+EPP FLKR+FS+PKN+RRT A GDVVVPVIGARDGWGGIRQ N+GI+PGVEYR+LE++ ST++ S+ + L SARDAP +F++G L FTMRP+YPLVARLER +WPVRVPAREFPVMLTPF+YNAATAWA+ TTSLS+L V FV SQALTLSVI S SMEPTLQVGDVVLVEKVSR+ ++ DIV+FRPPP L+++V+ AGG L+ DLFVKRVAALSGD V+VSADG V+V +A G R R G S A E G G S V A T + V VL+RI +++ LP G++FVLGDN SMDSRVWG+LD G+IVGHAL RVFP R+FGLL
Sbjct: 64 LRRRRRCGNFHQRRQTRAPALTMLFEKRPEERALGDVLIPEDAPGGAGEGGGDDAIG-VSVEPPGFLKRVFSIPKNVRRTAAAGDVVVPVIGARDGWGGIRQAS-NQGIYPGVEYRILEISVFPTARTPPTGDSTKASSDSAAAVAPYLSSXXXXXXXXXXXXXXXXXXXQPDLDAEPTAVLASARDAPPESFDDGSLVFTMRPIYPLVARLERGDWPVRVPAREFPVMLTPFSYNAATAWAAFTTSLSLLSVGFVLSQALTLSVINSHSMEPTLQVGDVVLVEKVSRSFLVKPNDIVYFRPPPVLQDIVSRAGGTLSPSDLFVKRVAALSGDTVTVSADGSVDVRAAAGGGITRLPKGTNRADNGG-SAAGGESDVILGDGVAGQEGSAAAVAAAKGGTLAEEKVALPDSVLQRITRLDEKVLPSGSVFVLGDNPAASMDSRVWGQLDKGEIVGHALLRVFPPRSFGLL 530
BLAST of mRNA_A-nodosum_M_contig1190.17.2 vs. uniprot
Match: A0A835YRZ1_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ1_9STRA) HSP 1 Score: 202 bits (514), Expect = 1.740e-50 Identity = 135/301 (44.85%), Postives = 157/301 (52.16%), Query Frame = 2
Query: 1181 GVEYRVLEVTTSTESGSERSLPSARDAPEGAFENGDLTFTMRPVYPLVARLEREWPVRVPAREFPVMLTPFAYNAATAWASLTTSLSVLVVCFVTSQALTLSVIPSRSMEPTLQVGDVVLVEKVSRAAFIRREDIVFFRPPPALREVVASAGGI-LNARDLFVKRVAALSGDVVSVSADGIVEVESARKTGSVRGSAQPGRGLEGAASVAEVEPSDDEGRGAIHPRISTNLVEEASPRTSSAATVNSGVLKRIRVAEKRRLPPGTIFVLGDNAEVSMDSRVWGELDDGQIVGHALFRVFPL 2080
GVEYR L +T L S DAP AFE GDL +RP+YPL+ RLER WPV V AR+ P+ LT FAYN ATAWA+L LTLS IPSRSMEP L+ GDVVLVEKVSR A +RR ++VFF PPPALR VA AGG L DLFVKRVAAL+GD V+V+ DG V A VRG+ G + + L+ + G+ FVLGDN S+DSRVWG+L IVG L RVFPL
Sbjct: 5 GVEYRCLGITCGGAP-----LDSVADAPPNAFEAGDLLLQLRPIYPLIPRLERAWPVTVAARDVPIALTAFAYNVATAWAALXXXXXXXXXXXXXXXTLTLSFIPSRSMEPVLRPGDVVLVEKVSRGALLRRGEVVFFAPPPALRAAVADAGGAPLRGGDLFVKRVAALTGDDVAVARDGETRVRGAL----VRGA------------------------GDLPRAARSRLLLREAXXXXXXXXXXXXXXXXXXXXXXXXXXAGSAFVLGDNPLHSVDSRVWGDLPYSNIVGRPLLRVFPL 272
BLAST of mRNA_A-nodosum_M_contig1190.17.2 vs. uniprot
Match: A0A0G4EFP7_VITBC (Mitochondrial inner membrane protease subunit n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFP7_VITBC) HSP 1 Score: 187 bits (476), Expect = 1.750e-48 Identity = 134/346 (38.73%), Postives = 173/346 (50.00%), Query Frame = 2
Query: 1070 KNIRRTTAVGDVVVPVIGARDGWGGIRQGLVNRGIFPGVEYRVLEVTTSTESGSERSLPSARDAPEGAFENGDLTFTMRPVYPLVARLEREWPVRVPAREFPVMLTPFAYNAATAWASLTTSLSVLVVCFVTSQALTLSVIPSRSMEPTLQVGDVVLVEKVSRAAFIRRE-DIVFFRPPPALREVVASAGGILNARDLFVKRVAALSGDVVSVSADGIVEVESARKTGSVRGSAQPGRGLEGAASVAEVEPSDDE----GRGAIHPRISTNLVEEASPRTSSAATVNSGVLKRIRVAEKRRLPPGTIFVLGDNAEVSMDSRVWGELDDGQIVGHALFRVFPLRAFG 2092
K++RR G +VP+IGAR GW IR+ + +G++PGV+YRV + R D T+RP Y LV +LER+WPV + E P+ LTP YN AT ++L ++ +L V V SQ +L IPS SMEPTL GDV+LVEKVSR + DIV F PP LR V AGG L DLFVKRVAA GD V+V GL V P +E G A R ++ A R A +G VA++ L G ++VLGDN S+DSR+WGEL + +IVGH + R+FP FG
Sbjct: 102 KDMRREIREGGDIVPLIGARPGWAAIRENMFRKGVYPGVDYRVERIDVRANGDPIR----------------DAVITVRPRYRLVDKLERQWPVTIAMSEVPIFLTPRMYNTATLISTLLSAAQLLAVALVASQFCSLYYIPSYSMEPTLHKGDVLLVEKVSRLVRPPKNGDIVLFNPPEQLRTFVRQAGGQLAPGDLFVKRVAATQGDRVTVD-----------------------NGLPTINGHTYVYPEPEEPPTIGSDAPPARADGSMQRLAIGR--GFAWPYAGEAPSQWVADECVLGSGAVYVLGDNPVRSVDSRLWGELRESEIVGHPVIRLFPWGRFG 406
BLAST of mRNA_A-nodosum_M_contig1190.17.2 vs. uniprot
Match: A0A448ZBV4_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBV4_9STRA) HSP 1 Score: 187 bits (475), Expect = 1.460e-46 Identity = 142/381 (37.27%), Postives = 193/381 (50.66%), Query Frame = 2
Query: 1001 SSAASGGISIEPPSFLKRLFSVPKNIR------------RTTAVGDVVVPVIGARDGWGGIRQGLVNRGIFPGVEYRVLEVTTSTESGSER--SLPSARDAPEGAFENGDLTFTMRPVYPLVARLEREWPVRVPAREFPVMLTPFAYNAATAWASLTTSLSVLVVCFVTSQALTLSVIPSRSMEPTLQVGDVVLVEKVS-RAAFIRRE--DIVFFRPPPALREVVASAGGILNARDLFVKRVAALSGDVVSVSADGIVEVESARKTGSVRGSAQPGRGLEGAASVAEVEPSDDEGRGAIHPRISTNLVEEASPRTSSAATVNSGVLKRIRVAEKRRLPPGTIFVLGDNAEVSMDSRVWGELDDGQIVGHALFRVFPLRAFG 2092
SS+A I ++ + S K+IR + VG VVVPV+ R + +G +PGVEYR+L + G ER S P A + ++PVYPLVA+LER WPVRV R+ P + TP YN +A+ SL T+ S L V F+ SQA++L IPS+SM+PTL+VGDV+LV+KVS R F + E D+V F PP L+E+VA GG L++RDLFVKR+AA GD V+V DG V+V + G + E EP L+E K I E + + +FV+GD + VS+DSRVWG L+ IVG + R++PL FG
Sbjct: 301 SSSADANIEVQEKEPSSPMSSWNKDIRLVEEGNTNEHNTESVRVGKVVVPVLSRLSQ----RPKMFEQGAYPGVEYRILRILD--RDGRERFTSCPGA-------------DYELKPVYPLVAQLERPWPVRVNERDIPKLFTPSMYNLLSAFGSLFTAASGLFVAFLLSQAISLFFIPSKSMDPTLKVGDVLLVDKVSSRTPFRKNEVGDMVLFSPPSRLQEIVAKNGGNLSSRDLFVKRIAASPGDRVTVYKDGKVDVNGQDV-------------VAGRRDLCEAEP--------------LRLIE-----------------KYIEPREDKIIDQKEVFVMGDCSSVSVDSRVWGSLEAENIVGRPIVRIWPLDRFG 618
BLAST of mRNA_A-nodosum_M_contig1190.17.2 vs. uniprot
Match: B7G479_PHATC (Mitochondrial inner membrane protease subunit n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G479_PHATC) HSP 1 Score: 178 bits (452), Expect = 1.080e-43 Identity = 140/365 (38.36%), Postives = 188/365 (51.51%), Query Frame = 2
Query: 1046 LKRLFSVP---KNIRRTT----AVGDVVVPVIGARDGWGGIRQGLVNRGIFPGVEYRVLEVTTSTESGSERSLPSARDAPEGAFENGDLTFTMRPVYPLVARLEREWPVRVPAREFPVMLTPFAYNAATAWASLTTSLSVLVVCFVTSQALTLSVIPSRSMEPTLQVGDVVLVEKVSRAAFIRRE-----DIVFFRPPPALRE-VVASAGGILNARDLFVKRVAALSGDVVSVSADGIVEVESARKTGSVRGSAQPGRGLEGAASVAEVEPSDDEGRGAIHPRISTNLVEEASPRTSSAATVNSGVLKRIRVAEKRRLPPGTIFVLGDNAEVSMDSRVWGELDDGQIVGHALFRVFPLRAFGLLP 2101
++++ S P NI TT VG +VVPV+ R + +G +PGVEYR+L + + + R L + + ++PVYPLV +LER WPVRV R+ P +LTP YN +A SL T+L+ L+V FV SQA++L VIPS SM PTL GDVVLV+K++ + R D+VFF PP L++ VV S G L RDLFVKRVAA GDV++V G V V A T +V A E EP R+ +++ASP A V R+ PG + VLGD A VS+DSRVWG L IVG + R++P +G +P
Sbjct: 280 IRKIDSAPPSTNNIATTTNERVRVGTIVVPVLQKL----AQRPRMFQQGAYPGVEYRILRII---DPHTNRDL---------FYSQPGADYELKPVYPLVRQLERPWPVRVNERDIPKLLTPTMYNTVSAVGSLLTALTGLLVAFVLSQAVSLFVIPSLSMAPTLAKGDVVLVDKLTPRFWGPRTNIPVGDVVFFHPPEPLQDMVVRSTGRRLAPRDLFVKRVAAGPGDVLTVDPSGSVRVNGA--TPAV------------ARETCEAEPL----------RLIEAYLKKASPDNPDGANV--------------RIGPGQVAVLGDCASVSIDSRVWGPLPQNDIVGRPVVRLWPPSRWGPVP 590
BLAST of mRNA_A-nodosum_M_contig1190.17.2 vs. uniprot
Match: A0A1Z5JWA6_FISSO (Mitochondrial inner membrane protease subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWA6_FISSO) HSP 1 Score: 157 bits (396), Expect = 5.040e-37 Identity = 119/344 (34.59%), Postives = 177/344 (51.45%), Query Frame = 2
Query: 1094 VGDVVVPVIGARDGWGGIRQGLVNRGIFPGVEYRVLEVTTSTESGSERSLPSARDAPEGAFENGDLTFTMRPVYPLVARLEREWPVRVPAREFPVMLTPFAYNAATAWASLTTSLSVLVVCFVTSQALTLSVIPSRSMEPTLQVGDVVLVEKVSRAAFIRRE---------DIVFFRPPPALREVVASAGGI-LNARDLFVKRVAALSGDVVSVS-ADGIVEVESARKTGSVRGSAQPGRGLEGAASVAEVEPSDDEGRGAIHPRISTNLVEEASPRTSSAATVNSGVLKRIRVAEKRRLPPGTIFVLGDNAEVSMDSRVWGELDDGQIVGHALFRVFPLRAFG 2092
VG +VVP++ + R + +G +PGVEYR+L + E+G++ + + + ++P+YPLV +LER WPVRV R+ P + TP YN +A SL T+++ L+ F+ SQA+++ VIPSRSMEPTLQVGDV+LV+KV+ + +I+ F P +L+++V +GG L R+LFVKRVAA G + ++ A G VE++ + LE E EP T L+E K +R ++ ++ P + VLGD + VS+DSRVWG L IVG L RV+PL G
Sbjct: 213 VGRIVVPILRSL----AERPAMFRQGTYPGVEYRILRII-DPETGADLF-----------YSRPGVDYELKPIYPLVQQLERLWPVRVNERDIPKLYTPAMYNGISAVGSLLTAVTGLLAAFLVSQAISIFVIPSRSMEPTLQVGDVLLVDKVTPRLTNKLNLNKYNDWVGNIILFHPTESLQDIVLKSGGRKLTDRELFVKRVAAGPGSTLKITDASGAVEIDGRKP-------------LERRDFCGE-EP--------------TRLIE-----------------KFLRQGDEFQVGPKQVAVLGDCSSVSIDSRVWGPLPTDNIVGRPLLRVWPLSRVG 495
BLAST of mRNA_A-nodosum_M_contig1190.17.2 vs. uniprot
Match: A0A1Z5KRR1_FISSO (Mitochondrial inner membrane protease subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRR1_FISSO) HSP 1 Score: 152 bits (385), Expect = 1.150e-36 Identity = 119/344 (34.59%), Postives = 175/344 (50.87%), Query Frame = 2
Query: 1094 VGDVVVPVIGARDGWGGIRQGLVNRGIFPGVEYRVLEVTTSTESGSERSLPSARDAPEGAFENGDLTFTMRPVYPLVARLEREWPVRVPAREFPVMLTPFAYNAATAWASLTTSLSVLVVCFVTSQALTLSVIPSRSMEPTLQVGDVVLVEKVSRAAFIRRE---------DIVFFRPPPALREVVASAGGI-LNARDLFVKRVAALSGDVVSVS-ADGIVEVESARKTGSVRGSAQPGRGLEGAASVAEVEPSDDEGRGAIHPRISTNLVEEASPRTSSAATVNSGVLKRIRVAEKRRLPPGTIFVLGDNAEVSMDSRVWGELDDGQIVGHALFRVFPLRAFG 2092
VG +VVP++ R + +G +PGVEYR+L + E+G++ + + + ++P+YPLV +LER WPVRV ++ P + TP YN +A SL T++ L+ F+ SQA+++ VIPSRSMEPTLQVGDV+LV+K++ + IV FRP +L+++V +GG L R+LFVKRVAA G + ++ A G VE++ + LE E EP T L+E K +R ++ ++ P + VLGD + VS+DSRVWG L IVG L RV+PL G
Sbjct: 81 VGRIVVPILRNL----AERPAMFRQGTYPGVEYRILRII-DPETGADLF-----------YSRPGVDYELKPIYPLVQQLERLWPVRVNEKDIPRLYTPAMYNGLSAIGSLFTAVMGLLAAFLVSQAISIFVIPSRSMEPTLQVGDVLLVDKLTPRLTNKLNLNKYSEWVGYIVLFRPTESLQDIVLQSGGRKLTDRELFVKRVAAGPGSTLKITDASGAVEIDGRKP-------------LERRDFCGE-EP--------------TRLIE-----------------KFLRQGDEFQVGPKQVAVLGDCSSVSIDSRVWGPLPTDNIVGRPLLRVWPLSRVG 363
BLAST of mRNA_A-nodosum_M_contig1190.17.2 vs. uniprot
Match: A0A7S0Y0G9_HEMAN (Mitochondrial inner membrane protease subunit n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y0G9_HEMAN) HSP 1 Score: 150 bits (380), Expect = 2.030e-36 Identity = 121/346 (34.97%), Postives = 174/346 (50.29%), Query Frame = 2
Query: 1067 PKNIRRTTAVGDVVVPVIGARDGWGGIRQGLV-NR------GIFPGVEYRVLEVTTSTESGSERSLPSARDAPEGAFENGDLTFTMRPVYPLVARLEREWPVRVPAREFPVMLTPFAYNAATAWASLTTSLSVLVVCFVTSQALTLSVIPSRSMEPTLQVGDVVLVEKVSRA-AFIRREDIVFFRPPPALREVVASAGGILNARDLFVKRVAALSGDVVSV-SADGIVEVESARKTGSVRGSAQPGRGLEGAASVAEVEPSDDEGRGAIHPRISTNLVEEASPRTSSAATVNSGVLKRIRVAEKRRLPPGTIFVLGDNAEVSMDSRVWGELDDGQIVGHALFRVFP 2077
P++ R VG V VP A GG R GL+ NR G++PG+EYR++ + + ++ +L PEGA G++ ++RP+YPL RLER WPV V + + P LT YN+ T + S+SV++ +A++ IPS SMEPT+ GD++L EK+S +R +I+ F PP +L+ VV S GG + RDLF+KRVAAL GDVV+V +ADG V V R V P+ DE G G+++ +K ++ G FVLGD VS+DSRVWG L D + L +++P
Sbjct: 39 PRDTRGELRVGQVFVPTTLAG---GGSRPGLLQNRDRMFAVGVYPGIEYRLMGMR---DIDTKETLFRV---PEGA---GEVEMSVRPIYPLDKRLERPWPVVVSSSDVPCFLTQAMYNSLTLVGTALWSVSVVLFVLFAREAVSFYKIPSASMEPTIHRGDLILAEKLSPLWKTPQRGEILLFTPPDSLKAVVESQGGFVGPRDLFIKRVAALPGDVVTVDTADGSVTVNGER--------------------VQRQGPTCDEPSGGAQ-----------------------GLVR----PQKGKVKSGVSFVLGDCGPVSVDSRVWGTLSDDDVKARPLVKLWP 325
BLAST of mRNA_A-nodosum_M_contig1190.17.2 vs. uniprot
Match: A0A7S4C1M9_CHRCT (Mitochondrial inner membrane protease subunit n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C1M9_CHRCT) HSP 1 Score: 150 bits (380), Expect = 4.720e-36 Identity = 123/346 (35.55%), Postives = 159/346 (45.95%), Query Frame = 2
Query: 1097 GDVVVPVIG----ARDGWGGIRQGLVNRGIFPGVEYRVLEVTTSTESGSERSLPSARDAPEGAFENGDLTFTMRPVYPLVARLEREWPVRVPAREFPVMLTPFAYNAATAWASLTTSLSVLVVCFVTSQALTLSVIPSRSMEPTLQVGDVVLVEKVSRA--AFIRREDIVFFRPPPALREVV---ASAGGILNARD---LFVKRVAALSGDVVSVSADGIVEVESARKTGSVRGSAQPGRGLEGAASVAEVEPSDDEGRGAIHPRISTNLVEEASPRTSSAATVNSGVLKRIRVAEKRRLPPGTIFVLGDNAEVSMDSRVWGELDDGQIVGHALFRVFPLRAFGLL 2098
G +VVP + +R +R + G++PGV+Y + + ER NG +RP Y L+ +LER WPVRVP P +TP YNA A +L +L+ L+ S LTLSVI S SM PT+ DV+LVEKVSR A +RR D+VFF PP LRE+V A+A G+ R LFVKRV A DVV V G V L G A+V+P N + +++ + L G FVLGDNA+ S+DSR WG LD+ IVG + RVFPL FG L
Sbjct: 94 GRIVVPTLARRIRSRKEMKQLRDRMFAEGVYPGVDYIIETI--------ERP------------RNGPAILRVRPEYALIPKLERNWPVRVPVSVSPDWMTPSGYNAQVAIFALGLALTGLLGALAASTVLTLSVITSTSMAPTILPRDVLLVEKVSRRFHAPLRRGDLVFFEPPAELREIVRARAAAAGVAEPRRYGRLFVKRVVAAEDDVVGVDDHGHVT-------------------LNGGDIGADVDP-------------------------------NGPLASLVKMQQTLPLASGKYFVLGDNADSSVDSRCWGGLDEADIVGRPVVRVFPLSRFGPL 369
BLAST of mRNA_A-nodosum_M_contig1190.17.2 vs. uniprot
Match: A0A7S1CZJ0_CYCTE (Mitochondrial inner membrane protease subunit n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZJ0_CYCTE) HSP 1 Score: 147 bits (371), Expect = 4.910e-36 Identity = 99/272 (36.40%), Postives = 138/272 (50.74%), Query Frame = 2
Query: 1295 FTMRPVYPLVARLEREWPVRVPAREFPVMLTPFAYNAATAWASLTTSLSVLVVCFVTSQALTLSVIPSRSMEPTLQVGDVVLVEKVSRAAFIRRE---DIVFFRPPPALREVVASAGGILNARDLFVKRVAALSGDVVSVSADGIVEVESARKTGSVRGSAQPGRGLEGAASVAEVEPSDDEGRGAIHPRISTNLVEEASPRTSSAATVNSGVLKRIRVAEKRRLPPGTIFVLGDNAEVSMDSRVWGELDDGQIVGHALFRVFPLRAFGLLP 2101
+ ++P+YPLV +LER WPV V E P + T YN +A SL T+ L V + SQ ++L IPSRSM+PTL VGDVV+VEKVS F D++ F PP L+E+V S+GG + RDLFVKRVAA V+V +DG V ++ L+ + EP G+++R + +FV+GD + VS+DSRVWG L + +I+G LFRV+P+ FG +P
Sbjct: 20 YDLKPIYPLVDQLERPWPVTVNEAEIPRLYTVGMYNTVSALGSLFTATFGLGVAYALSQMISLFFIPSRSMDPTLAVGDVVVVEKVSPRIFKSNNHVGDVILFHPPSRLQEIVKSSGGRIGNRDLFVKRVAAEPTQKVTVGSDGKVLIDEME--------------LQEKRDMCSEEPL--------------------------------GLIERYIEPGTTEVQSDEVFVMGDCSSVSIDSRVWGPLPNKEIIGKPLFRVWPIERFGSIP 245 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1190.17.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1190.17.2 >prot_A-nodosum_M_contig1190.17.2 ID=prot_A-nodosum_M_contig1190.17.2|Name=mRNA_A-nodosum_M_contig1190.17.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=397bp MMTDERSGGRQLGDILAPEDESGDASSARSSAASGGISIEPPSFLKRLFSback to top mRNA from alignment at A-nodosum_M_contig1190:177895..181975+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1190.17.2 ID=mRNA_A-nodosum_M_contig1190.17.2|Name=mRNA_A-nodosum_M_contig1190.17.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4081bp|location=Sequence derived from alignment at A-nodosum_M_contig1190:177895..181975+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1190:177895..181975+ >mRNA_A-nodosum_M_contig1190.17.2 ID=mRNA_A-nodosum_M_contig1190.17.2|Name=mRNA_A-nodosum_M_contig1190.17.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1191bp|location=Sequence derived from alignment at A-nodosum_M_contig1190:177895..181975+ (Ascophyllum nodosum dioecious)back to top |