mRNA_A-nodosum_M_contig1190.14.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1190.14.1 vs. uniprot
Match: D8LKT1_ECTSI (Dual specificity protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKT1_ECTSI) HSP 1 Score: 187 bits (474), Expect = 1.300e-53 Identity = 95/160 (59.38%), Postives = 109/160 (68.12%), Query Frame = 3
Query: 381 ASGLVSVIQEASSGETAEDHVYCCRMCRRTILTQGEVETHEVARQSFHRRKCKVGTSTKVCSSVFLGEPLPWMKQQTGEVVEGKLFCPNKSCGVRLGSLKWTGAQCSCGSWVTPAIQFPKKNLDVRSAAPLGPPPGTVVHASVLEGTRGSREARXGRGTP 860
A+ V++ Q A E ED VY CRMCRR + ++E HE A+ +F RRK K TS CSS+FL EP WMKQQ GE+ EGKL CPNK+CG RLGSLKWTGAQCSCGSW+TPAIQFP+KNLD R GPPPGTVVH S+L A G GTP
Sbjct: 28 AAAAVALNQPA---EDQEDVVYNCRMCRRAVFNGADIEKHEAAQHNFRRRKSKGVTSKGPCSSIFLSEPKRWMKQQAGEM-EGKLSCPNKACGARLGSLKWTGAQCSCGSWITPAIQFPRKNLDARPRVSTGPPPGTVVHPSLL--------AAGGLGTP 175
BLAST of mRNA_A-nodosum_M_contig1190.14.1 vs. uniprot
Match: A0A7S1XM93_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XM93_9STRA) HSP 1 Score: 109 bits (273), Expect = 7.330e-25 Identity = 49/117 (41.88%), Postives = 69/117 (58.97%), Query Frame = 3
Query: 435 DHVYCCRMCRRTILTQGEVETHEVARQSFHRRKCKVGTSTKVCSSVFLGEPLPWMKQQTGEVVEGKLFCPNKSCGVRLGSLKWTGAQCSCGSWVTPAIQFPKKNLDVRSAAPLGPPP 785
+H Y CR+CRR + ++E H +Q RR V + + CSS+FL EP W +VEG++ CPN+ C R+GSL W+GAQCSCG+W+TPA Q +D ++ PPP
Sbjct: 7 EHYYTCRLCRRELFVADDLEAHAAGQQQLWRRG--VSAAKQHCSSLFLAEPPEW-----STLVEGRIDCPNERCRSRIGSLSWSGAQCSCGTWITPAFQIVLSKVDAKARRRRAPPP 116
BLAST of mRNA_A-nodosum_M_contig1190.14.1 vs. uniprot
Match: A0A7S1TTA1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTA1_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.050e-22 Identity = 45/100 (45.00%), Postives = 62/100 (62.00%), Query Frame = 3
Query: 435 DHVYCCRMCRRTILTQGEVETHEVARQSFHRRKCKVGTSTKVCSSVFLGEPLPWMKQQTGEVVEGKLFCPNKSCGVRLGSLKWTGAQCSCGSWVTPAIQF 734
+H Y CR+CRR + ++E H +Q RR V + + CSS+FL EP W +VEG++ CPN+ C R+GSL W+GAQCSCG+W+TPA Q
Sbjct: 7 EHYYTCRLCRRELFVADDLEAHAAGQQQLWRRG--VSAAKQHCSSLFLAEPPEW-----STLVEGRIDCPNERCRSRIGSLSWSGAQCSCGTWITPAFQI 99
BLAST of mRNA_A-nodosum_M_contig1190.14.1 vs. uniprot
Match: A0A024UKQ3_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UKQ3_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.830e-22 Identity = 55/136 (40.44%), Postives = 71/136 (52.21%), Query Frame = 3
Query: 363 GTVVDDASGLVSVIQEASSGETAEDHVYCCRMCRRTILTQGEVETHEVARQSFHRRK----CKVGTSTKVCSSVFLGEPLPWMKQQTGEVVEGKLFCPNKSCGVRLGSLKWTGAQCSCGSWVTPAIQFPKKNLDVR 758
G VVD L E Y CRMCR + T ++ HE R +RK K+G CSS FL + WM + + + EGKLFCP C RLGS W+G+QCSCG+WVTP++QF K +DV+
Sbjct: 18 GVVVDHHWFLARPAVEVGMASDESKAEYVCRMCRALLFTSDDLMEHEPQRHQISQRKKLKEAKLGAVE--CSSYFLSDTKEWMDEAS--LAEGKLFCPVAKCNSRLGSFGWSGSQCSCGTWVTPSVQFTKSRVDVK 149
BLAST of mRNA_A-nodosum_M_contig1190.14.1 vs. uniprot
Match: A0A7S2Y1A4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1A4_9STRA) HSP 1 Score: 100 bits (250), Expect = 3.150e-22 Identity = 45/103 (43.69%), Postives = 56/103 (54.37%), Query Frame = 3
Query: 444 YCCRMCRRTILTQGEVETHEVARQSFHRRKCKVGTSTKVCSSVFLGEPLPWMKQQTGEVVEGKLFCPNKSCGVRLGSLKWTGAQCSCGSWVTPAIQFPKKNLD 752
+ CR CR + + ++E H F + K K G C S FL E L WM + +EGKLFCPN C RLG W G+QCSCGSWV PA+Q P +D
Sbjct: 7 FTCRRCRTVLFQESDLEGHVPQTHKFRKAKIKSGPVQMACGSYFLKESLEWMGPM--DHLEGKLFCPNPRCKTRLGHYNWAGSQCSCGSWVAPALQVPMSKVD 107
BLAST of mRNA_A-nodosum_M_contig1190.14.1 vs. uniprot
Match: A0A485L5N9_9STRA (Aste57867_16448 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L5N9_9STRA) HSP 1 Score: 101 bits (251), Expect = 5.920e-22 Identity = 50/118 (42.37%), Postives = 67/118 (56.78%), Query Frame = 3
Query: 411 ASSGETAEDHVYCCRMCRRTILTQGEVETHEVARQSFH-RRKCKVGT-STKVCSSVFLGEPLPWMKQQTGEVVEGKLFCPNKSCGVRLGSLKWTGAQCSCGSWVTPAIQFPKKNLDVR 758
ASS + E Y CRMCR + T ++ H + R+K K G CSS FL + WM + V +GK+FCP C RLGS W+G+QCSCG+W+TP+IQF K +DV+
Sbjct: 2 ASSSDVVE---YVCRMCRHHLFTSDDLMEHAPQQHQISMRKKIKEGKLGAPECSSYFLADTKDWMDENA--VADGKIFCPVAKCNSRLGSFNWSGSQCSCGTWITPSIQFTKSRVDVK 114
BLAST of mRNA_A-nodosum_M_contig1190.14.1 vs. uniprot
Match: A0A6U2PMU6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2PMU6_9STRA) HSP 1 Score: 101 bits (252), Expect = 7.740e-22 Identity = 52/129 (40.31%), Postives = 67/129 (51.94%), Query Frame = 3
Query: 444 YCCRMCRRTILTQGEVETHEVARQSFHRRKCKVGTSTKVCSSVFLGEPLPWMKQQTGEVVEGKLFCPNKSCGVRLGSLKWTGAQCSCGSWVTPAIQFPKKNLDVRSAAPL---GPPPGTVVHASVLEGT 821
+ CR CR + + + TH + SF RRK T K CSSVFL L WM + EG+L CP CG ++G W G QCSCGSW+TPAI FP +D++ + V+H SVL T
Sbjct: 39 FACRKCRFILFGEDDTTTHIKSNHSFSRRKSGSNTDAKKCSSVFLSSGLDWMGDMSA--FEGRLDCPK--CGSKVGQWNWGGTQCSCGSWITPAIYFPMSKVDLKRPIQIDRTSTEDAAVMHQSVLNKT 163
BLAST of mRNA_A-nodosum_M_contig1190.14.1 vs. uniprot
Match: W4G7N2_9STRA (C2H2-type domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G7N2_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 5.140e-20 Identity = 50/120 (41.67%), Postives = 69/120 (57.50%), Query Frame = 3
Query: 411 ASSGETAEDHVYCCRMCRRTILTQGEVETHEVARQSFHRRK----CKVGTSTKVCSSVFLGEPLPWMKQQTGEVVEGKLFCPNKSCGVRLGSLKWTGAQCSCGSWVTPAIQFPKKNLDVR 758
AS E+ + V CRMCR + T ++ HE + +RK K+G CSS FL + WM + + + EGKL CP C RLGS W+G+QCSCG+WVTP++QF K +DV+
Sbjct: 2 ASEDESKVEFV--CRMCRVLLFTSDDLLQHEPQKHQISQRKKLKESKLGAVD--CSSFFLVDTKEWMDEAS--LAEGKLLCPVAKCNARLGSFGWSGSQCSCGTWVTPSVQFTKSRVDVK 115
BLAST of mRNA_A-nodosum_M_contig1190.14.1 vs. uniprot
Match: A0A2R5GDK4_9STRA (Dual specificity protein phosphatase 12 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GDK4_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.230e-18 Identity = 50/122 (40.98%), Postives = 65/122 (53.28%), Query Frame = 3
Query: 405 QEASSGETAEDHVYCCRMCRRTILTQGEVETHEVARQ---SFHRRKCKVGTSTKVCSSVFLGEPLPWMKQQT-GEVVEGKLFCPNKSCGVRLGSLKWTGAQCSCGSWVTPAIQFPKKNLDVR 758
+ A E A VYCC+ CR + T ++ + Q + +R GT K CSS+FL EP WM + V GKL CP CG R+GS W G+QCSCG+W+ PAIQ P +D R
Sbjct: 72 EAAEQAEEARVTVYCCQRCRCALFTSRQLSSQHATGQHDFGYFKRVKDSGTLGKDCSSLFLSEPNEWMSALAMADEVVGKLNCPK--CGHRVGSFAWAGSQCSCGTWIVPAIQVPLSKVDPR 191
BLAST of mRNA_A-nodosum_M_contig1190.14.1 vs. uniprot
Match: F2UG78_SALR5 (Protein-tyrosine-phosphatase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UG78_SALR5) HSP 1 Score: 95.1 bits (235), Expect = 3.830e-18 Identity = 48/109 (44.04%), Postives = 61/109 (55.96%), Query Frame = 3
Query: 450 CRMCRRTILTQGEVETHEVARQ--SFHRRKCKVGTSTKVCSSVFLGEPLPWMKQQTGEVVEGKLFCPNKSCGVRLGSLKWTGAQCSCGSWVTPAIQFPKKNLDVRSAAP 770
CR CRR + + H SF R+ + +CSSVF EP+ WM + VVEGK+ CP C RLGS W+GAQCSCG+W+TPA Q K +D+ AAP
Sbjct: 195 CRKCRRVVFHGRNLLEHTPGEGQISFRYRRRDMHAQQDLCSSVF-AEPMAWMNEVVDGVVEGKITCPK--CQYRLGSFNWSGAQCSCGAWITPAFQVHKNRVDIGIAAP 300 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1190.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1190.14.1 >prot_A-nodosum_M_contig1190.14.1 ID=prot_A-nodosum_M_contig1190.14.1|Name=mRNA_A-nodosum_M_contig1190.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=206bp MASPSASPTLNQRDGTVVDDASGLVSVIQEASSGETAEDHVYCCRMCRRTback to top mRNA from alignment at A-nodosum_M_contig1190:168838..172098- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1190.14.1 ID=mRNA_A-nodosum_M_contig1190.14.1|Name=mRNA_A-nodosum_M_contig1190.14.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3261bp|location=Sequence derived from alignment at A-nodosum_M_contig1190:168838..172098- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1190:168838..172098- >mRNA_A-nodosum_M_contig1190.14.1 ID=mRNA_A-nodosum_M_contig1190.14.1|Name=mRNA_A-nodosum_M_contig1190.14.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=618bp|location=Sequence derived from alignment at A-nodosum_M_contig1190:168838..172098- (Ascophyllum nodosum dioecious)back to top |