mRNA_A-nodosum_M_contig119.59.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig119.59.2 vs. uniprot
Match: A0A6H5JB81_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JB81_9PHAE) HSP 1 Score: 538 bits (1387), Expect = 4.320e-182 Identity = 267/303 (88.12%), Postives = 281/303 (92.74%), Query Frame = 3
Query: 312 VAAAIQPFVCGGMAACFASCCIHPIDLAKVRIQLLGSMSPDVKKPSFPALLTHMVRTEGIGSVYAGLSASIMRQAIYGTARIGLHRSFSDKLVEMNEGKPIPFWMKTLSGMGSGAIAVTIGTPMDVALVRMQSDSMKPANERRNYKHVIDALRRCAAEEGIGALYAGLAPNILRGMSMNVGMMACYDQAKGTMMQQVFNETDEKNPSLPVKMTSSAIAGFTAAAFSLPFDMLKSRLQDMKPDSKGNMPYKGLMDCARGIVRKEGPFAFWTGFTAYYGRCAPHAMIILLSIESITSAYRQVFDL 1220
VAA IQPFVCGG AACFASCCIHPIDLAKVRIQLLGSM+PD KKPSFPALLTHMV++EGI S+YAGLSA+IMRQAIYGTARIGLHR+FSDKL E N+G IPFWMKTLSGMGSGAIAVTIGTPMDVALVRMQSDSMKP ERRNYKHVIDALRRCAAEEGIG+LYAGLAPNILRGMSMNVGMMACYDQAK T MQ VF ETD KNP LPVK++S+AIAGFTAAAFSLPFDMLKSRLQD KPDSKGNMPYKGL DCA GI+RKEGP AFWTGFTAYYGRCAPHAMIILLSIESITSAYR +F +
Sbjct: 3 VAATIQPFVCGGAAACFASCCIHPIDLAKVRIQLLGSMAPDTKKPSFPALLTHMVKSEGISSIYAGLSAAIMRQAIYGTARIGLHRTFSDKLQERNKGSEIPFWMKTLSGMGSGAIAVTIGTPMDVALVRMQSDSMKPKEERRNYKHVIDALRRCAAEEGIGSLYAGLAPNILRGMSMNVGMMACYDQAKSTTMQ-VFGETDAKNPGLPVKLSSAAIAGFTAAAFSLPFDMLKSRLQDQKPDSKGNMPYKGLADCASGILRKEGPLAFWTGFTAYYGRCAPHAMIILLSIESITSAYRTIFQI 304
BLAST of mRNA_A-nodosum_M_contig119.59.2 vs. uniprot
Match: A0A835YQA6_9STRA (Oxoglutarate/malate translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQA6_9STRA) HSP 1 Score: 458 bits (1179), Expect = 6.030e-151 Identity = 224/303 (73.93%), Postives = 257/303 (84.82%), Query Frame = 3
Query: 312 VAAAIQPFVCGGMAACFASCCIHPIDLAKVRIQLLGSMSPDVKKPSFPALLTHMVRTEGIGSVYAGLSASIMRQAIYGTARIGLHRSFSDKLVEMNEGKPIPFWMKTLSGMGSGAIAVTIGTPMDVALVRMQSDSMKPANERRNYKHVIDALRRCAAEEGIGALYAGLAPNILRGMSMNVGMMACYDQAKGTMMQQVFNETDEKNPSLPVKMTSSAIAGFTAAAFSLPFDMLKSRLQDMKPDSKGNMPYKGLMDCARGIVRKEGPFAFWTGFTAYYGRCAPHAMIILLSIESITSAYRQVFDL 1220
+A +QPFVCGG+AACFAS CIHPIDLAKVRIQL+ ++ PD K SFP L+ +MVR EG+ S+YAGLSA++MRQAIYGTARIGLHR+FSDKL EMN+G+ IPF+MKTLSGMGSGA+AV IGTP DVALVRMQSDSMKP +RRNY +V DALRRCAAEEG GALYAGLAPNILRGMSMNVGMMACYDQAK M + + + D + PSLPVK++SSAIAGFTAAAFSLPFDMLKSRLQD +PD+ G + Y GL+DCA + RKEG AFWTGF AYYGRCAPHAM+ILLSIE +T YR+V L
Sbjct: 3 LAETVQPFVCGGLAACFASSCIHPIDLAKVRIQLMSTLRPDAPKISFPTLIMNMVREEGVTSIYAGLSAALMRQAIYGTARIGLHRTFSDKLQEMNKGQEIPFYMKTLSGMGSGAVAVAIGTPFDVALVRMQSDSMKPKADRRNYNNVFDALRRCAAEEGAGALYAGLAPNILRGMSMNVGMMACYDQAKTVMARLLGDAPDARAPSLPVKLSSSAIAGFTAAAFSLPFDMLKSRLQDQRPDASGKLRYAGLLDCAASVARKEGVLAFWTGFGAYYGRCAPHAMLILLSIEQVTQTYRRVLGL 305
BLAST of mRNA_A-nodosum_M_contig119.59.2 vs. uniprot
Match: A0A7R9U5J4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5J4_9STRA) HSP 1 Score: 412 bits (1060), Expect = 4.260e-133 Identity = 211/304 (69.41%), Postives = 244/304 (80.26%), Query Frame = 3
Query: 312 VAAAIQPFVCGGMAACFASCCIHPIDLAKVRIQLLGSMSPDVKKPSFPALLTHMVRTEGIGSVYAGLSASIMRQAIYGTARIGLHRSFSDKLVEMNEGKPIPFWMKTLSGMGSGAIAVTIGTPMDVALVRMQSDSMKPANERRNYKHVIDALRRCAAEEGIGALYAGLAPNILRGMSMNVGMMACYDQAKGTMMQQVFNETDEKNPSLPVKMTSSAIAGFTAAAFSLPFDMLKSRLQDMKPDSKGNMPYKGLMDCARGIVRKEGPFAFWTGFTAYYGRCAPHAMIILLSIESITSAYRQVFDLK 1223
VA A+QPFVCGG AACFASC IHPIDLAKVR+QL ++ P+ K PSF +L+ MV EG+ SVY GLSA++MRQAIYGTARIGLHR+FSD L + G +PFWMKT+SGM SGAIAV IGTPMDVALVRMQ+DSMK RRNYK+VIDAL R A+EEG G LYAGLAPNILRGM+MNVGMMACYDQAK T+M + D K PSL K+ SSAIAGFTAAAFS+PFD++KSRLQDMKP++ G +PY GL+D A I+ KEGP AF+TGF AYY RCAPHAM ILL+IE + S YR +F LK
Sbjct: 15 VARALQPFVCGGTAACFASCIIHPIDLAKVRLQLFKTLHPEKKPPSFVTVLSTMVANEGVMSVYNGLSAALMRQAIYGTARIGLHRTFSDALSQQTGGA-VPFWMKTISGMSSGAIAVCIGTPMDVALVRMQADSMKEEQFRRNYKNVIDALVRVASEEGFGKLYAGLAPNILRGMAMNVGMMACYDQAKETVMTFT-GDKDPKRPSLSTKLASSAIAGFTAAAFSMPFDLMKSRLQDMKPNANGELPYTGLLDAAGKILTKEGPMAFYTGFGAYYFRCAPHAMTILLTIEYVNSLYRSIFGLK 316
BLAST of mRNA_A-nodosum_M_contig119.59.2 vs. uniprot
Match: W7TQ20_9STRA (Mitochondrial 2-oxoglutarate malate carrier n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQ20_9STRA) HSP 1 Score: 407 bits (1047), Expect = 3.730e-131 Identity = 202/301 (67.11%), Postives = 239/301 (79.40%), Query Frame = 3
Query: 312 VAAAIQPFVCGGMAACFASCCIHPIDLAKVRIQLLGSMSPDVKKPSFPALLTHMVRTEGIGSVYAGLSASIMRQAIYGTARIGLHRSFSDKLVEMNEGKPIPFWMKTLSGMGSGAIAVTIGTPMDVALVRMQSDSMKPANERRNYKHVIDALRRCAAEEGIGALYAGLAPNILRGMSMNVGMMACYDQAKGTMMQQVFNETDEKNPSLPVKMTSSAIAGFTAAAFSLPFDMLKSRLQDMKPDSKGNMPYKGLMDCARGIVRKEGPFAFWTGFTAYYGRCAPHAMIILLSIESITSAYRQVF 1214
+A IQPF CGG++ACFAS IHPIDLAKVR+QL +++P VK+PS +++ ++V+T+GI + YAGLSAS+MRQAIYGTARIGLHR+FSDKL E + G IPFWMKTLSGM SGAIAV IGTP DVALVRMQ+DSMKP RRNYK+V DA+ R EEG LYAGLAPN+LRGMSMNVGM+ACYDQAK + V + D K PSL + SSA+AGFT+A FSLPFDMLKSR+QDMKP+++G MPY GL DC I R+EG AFWTGF AYYGRCAPHAMIILL+IE + YR +F
Sbjct: 8 LAETIQPFACGGLSACFASSIIHPIDLAKVRLQLFATLNPGVKRPSAVSVIVNLVKTDGITAAYAGLSASLMRQAIYGTARIGLHRTFSDKL-EKSTGGSIPFWMKTLSGMASGAIAVCIGTPFDVALVRMQADSMKPLELRRNYKNVFDAIGRIFTEEGPMRLYAGLAPNVLRGMSMNVGMLACYDQAKDAISAHVTKDPDPKKPSLLTNLLSSAVAGFTSAFFSLPFDMLKSRMQDMKPNAQGKMPYSGLADCTLTIFRQEGILAFWTGFPAYYGRCAPHAMIILLTIEQVNKIYRSIF 307
BLAST of mRNA_A-nodosum_M_contig119.59.2 vs. uniprot
Match: A0A7S2JSB4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JSB4_9STRA) HSP 1 Score: 388 bits (997), Expect = 7.250e-124 Identity = 198/297 (66.67%), Postives = 229/297 (77.10%), Query Frame = 3
Query: 327 QPFVCGGMAACFASCCIHPIDLAKVRIQLLGSMSPDVKKPSFPALLTHMVRTEGIGSVYAGLSASIMRQAIYGTARIGLHRSFSDKLVEMNEGKPIPFWMKTLSGMGSGAIAVTIGTPMDVALVRMQSDSMKPANERRNYKHVIDALRRCAAEEGIGALYAGLAPNILRGMSMNVGMMACYDQAKGTMMQQVFNETDEKNPSLPVKMTSSAIAGFTAAAFSLPFDMLKSRLQDMKPDS-KGNMPYKGLMDCARGIVRKEGPFAFWTGFTAYYGRCAPHAMIILLSIESITSAYRQVF 1214
+PFVCGG AA FASC IHPIDLAKVR+QL G M+P PSFP ++ M++ +GI SVY G+ A+I RQ +YGTARIGLHRSFSDKLVEMN+GKPI F KTLSGM SG+IAV IGTP D+ALVR+Q+DSM PA +RRNYK+V DAL R EEGIGALY GL+PNILRGMSMNVGM+ACYDQAK ++ + PSL K+ SSAIAGFTAA FSLPFD++KSRL KPD G + YK + DCA I+R EGP F+ GFTAYYGRCAPHAMIIL+SIESIT YR F
Sbjct: 14 EPFVCGGSAATFASCFIHPIDLAKVRMQLYGQMNPGKPVPSFPTIIQSMIKADGIASVYKGVDAAIGRQMVYGTARIGLHRSFSDKLVEMNDGKPIGFLTKTLSGMASGSIAVCIGTPFDIALVRLQADSMAPAEDRRNYKNVFDALIRTTREEGIGALYKGLSPNILRGMSMNVGMLACYDQAK-EVVAAALGDPMTNGPSLSTKLGSSAIAGFTAALFSLPFDLMKSRLMAQKPDPLTGELAYKSVFDCAVKIMRSEGPQGFFGGFTAYYGRCAPHAMIILVSIESITQLYRGTF 309
BLAST of mRNA_A-nodosum_M_contig119.59.2 vs. uniprot
Match: A0A7R9WRN9_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WRN9_9STRA) HSP 1 Score: 388 bits (996), Expect = 1.020e-123 Identity = 197/304 (64.80%), Postives = 235/304 (77.30%), Query Frame = 3
Query: 312 VAAAIQPFVCGGMAACFASCCIHPIDLAKVRIQLLGSMSPDVKKPSFPALLTHMVRTEGIGSVYAGLSASIMRQAIYGTARIGLHRSFSDKLVEMNEGKPIPFWMKTLSGMGSGAIAVTIGTPMDVALVRMQSDSMKPANERRNYKHVIDALRRCAAEEGIGALYAGLAPNILRGMSMNVGMMACYDQAKGTMMQQVFNETDEKNPSLPVKMTSSAIAGFTAAAFSLPFDMLKSRLQDMKPDS-KGNMPYKGLMDCARGIVRKEGPFAFWTGFTAYYGRCAPHAMIILLSIESITSAYRQVFDL 1220
+A +QPFVCGG AA FAS IHPIDLAKVR+Q+ G ++P PSFP L++ MV+ +GI SVY G+ A+I RQ +YGTARIGLHR+FSDKLVE+N+GKPI F K LSGM SG+IAV IGTP D+ALVR+Q+D M +RRNYK+V DAL R + EEG+GALY GLAPNILRGMSMNVGMMACYDQAK ++ + N+ PSLP ++ +SA AGFTAA FSLPFD++KSRL MKPD G MPYKG+ DC I R EGP F+ GF+AYYGRCAPHAMIILLSIESIT+ Y+Q F L
Sbjct: 7 IAKTLQPFVCGGTAATFASIVIHPIDLAKVRMQIYGQLNPGKPIPSFPTLISQMVKADGITSVYKGVDAAIGRQMVYGTARIGLHRTFSDKLVEINDGKPISFVQKALSGMASGSIAVCIGTPFDIALVRLQADGMAKPEDRRNYKNVFDALLRTSREEGVGALYKGLAPNILRGMSMNVGMMACYDQAK-EIVAGLLNDPMVDGPSLPTRLGASATAGFTAALFSLPFDLVKSRLMAMKPDPVTGEMPYKGIADCVVKIARTEGPLGFFGGFSAYYGRCAPHAMIILLSIESITAFYKQSFGL 309
BLAST of mRNA_A-nodosum_M_contig119.59.2 vs. uniprot
Match: A0A7S2W328_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W328_9STRA) HSP 1 Score: 387 bits (993), Expect = 2.920e-123 Identity = 197/297 (66.33%), Postives = 230/297 (77.44%), Query Frame = 3
Query: 321 AIQPFVCGGMAACFASCCIHPIDLAKVRIQLLGSMSPDVKKPSFPALLTHMVRTEGIGSVYAGLSASIMRQAIYGTARIGLHRSFSDKLVEMNEGKPIPFWMKTLSGMGSGAIAVTIGTPMDVALVRMQSDSMKPANERRNYKHVIDALRRCAAEEGIGALYAGLAPNILRGMSMNVGMMACYDQAKGTMMQQVFNETDEKNPSLPVKMTSSAIAGFTAAAFSLPFDMLKSRL--QDMKPDSKGNMPYKGLMDCARGIVRKEGPFAFWTGFTAYYGRCAPHAMIILLSIESITSAYR 1205
A +PF CGG AA FASC IHPIDLAKVR+QL G M+P PSFP +++++V+T+GI +Y G+ A+I RQ +YGTARIGLHRSFSD LV+ NEGKPI F KTLSGM SG+IAV IGTP D+ALVR+QSDSM PA+ERRNYK+V DAL R EEGIGALY GL PNILRGMSMNVGM+ACYDQAK + + + PSLP KM SS IAGFTAA FSLPFD++KSRL Q + P++ G +PY G+ DCA I + EG FW GF+AYYGRCAPHAMIILLSIESIT AYR
Sbjct: 12 AAEPFACGGTAATFASCVIHPIDLAKVRMQLFGQMNPGKPIPSFPTIISNIVKTDGISGIYKGVDAAIGRQMVYGTARIGLHRSFSDILVQRNEGKPINFLAKTLSGMASGSIAVCIGTPFDIALVRLQSDSMAPASERRNYKNVFDALIRTTKEEGIGALYKGLMPNILRGMSMNVGMLACYDQAKEIVASVLNDPMTNNTPSLPTKMGSSCIAGFTAALFSLPFDLVKSRLMAQKINPET-GKLPYSGIADCAVKIFKNEGIAGFWGGFSAYYGRCAPHAMIILLSIESITQAYR 307
BLAST of mRNA_A-nodosum_M_contig119.59.2 vs. uniprot
Match: A0A7S2WJZ8_9STRA (Hypothetical protein n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WJZ8_9STRA) HSP 1 Score: 387 bits (993), Expect = 9.820e-123 Identity = 197/313 (62.94%), Postives = 238/313 (76.04%), Query Frame = 3
Query: 288 SVAMVAQQVAAAIQPFVCGGMAACFASCCIHPIDLAKVRIQLLG-SMSPDVKKPSFPALLTHMVRTEGIGSVYAGLSASIMRQAIYGTARIGLHRSFSDKLVEMNEGKPIPFWMKTLSGMGSGAIAVTIGTPMDVALVRMQSDSMKPANERRNYKHVIDALRRCAAEEGIGALYAGLAPNILRGMSMNVGMMACYDQAKGTMMQQVFNETDEKNPSLPVKMTSSAIAGFTAAAFSLPFDMLKSRLQDMKPDSK-GNMPYKGLMDCARGIVRKEGPFAFWTGFTAYYGRCAPHAMIILLSIESITSAYRQVFDL 1220
SVA A +QPFVCGG+AAC AS CIHPIDL KVR+QL G ++ P KP+ ++ + + TEGI +Y+GLSA++ RQA YGTARIGLHR+FS+ LVE+N G IPFW KTLSG+ SGAIAV IGTP DVALVRMQ+D KP ERRNYK+V DAL R + +EG+ L+ GLAPNILRGMSMNVGM+ CYD+AK ++ V ++ D SLP K+ SSA+AGF A SLPFDM+KSRLQ+M+ D K G +PYKG++DCA I+R EGP AFWTGF AYYGRCAPHAMIILLS+ESIT AYR+ F L
Sbjct: 3 SVAQDTTATAEKLQPFVCGGLAACLASSCIHPIDLTKVRLQLAGENIKPGQAKPTTIGVIRNALATEGISGLYSGLSAALTRQATYGTARIGLHRTFSNYLVELNGGAEIPFWQKTLSGLSSGAIAVCIGTPFDVALVRMQADGTKPVAERRNYKNVFDALIRISKQEGVSGLWRGLAPNILRGMSMNVGMLTCYDEAKQMIVANVTHDAD----SLPTKLASSAVAGFCCAFLSLPFDMIKSRLQNMRADPKTGAVPYKGVVDCAGKILRNEGPLAFWTGFGAYYGRCAPHAMIILLSLESITKAYRETFGL 311
BLAST of mRNA_A-nodosum_M_contig119.59.2 vs. uniprot
Match: A0A6U3X299_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3X299_9STRA) HSP 1 Score: 384 bits (987), Expect = 2.170e-122 Identity = 194/303 (64.03%), Postives = 233/303 (76.90%), Query Frame = 3
Query: 315 AAAIQPFVCGGMAACFASCCIHPIDLAKVRIQLLGSMSPDVKKPSFPALLTHMVRTEGIGSVYAGLSASIMRQAIYGTARIGLHRSFSDKLVEMNEGKPIPFWMKTLSGMGSGAIAVTIGTPMDVALVRMQSDSMKPANERRNYKHVIDALRRCAAEEGIGALYAGLAPNILRGMSMNVGMMACYDQAKGTMMQQVFNETDEKNPSLPVKMTSSAIAGFTAAAFSLPFDMLKSRLQDMKPDSK-GNMPYKGLMDCARGIVRKEGPFAFWTGFTAYYGRCAPHAMIILLSIESITSAYRQVFDL 1220
A A +PFVCGG AA FASC IHPIDLAKVR+QL G ++P PSF ++L+ MV+ +G+ SVY G+ A+I RQ +YGTARIGLHR+ S+K+VE NEGKPI F KTLSGM SG+IAV IGTP D+ALVR+Q+DSM P ERRNYK+V DAL R EEG+ ALY GL PNILRGMSMNVGM+ACYDQAK ++ ++ N+ PSLP KM SS +AGFTAA FSLPFD++KSRL KP + G MPY G+ DC I + EGP F++GF+AYYGRCAPHAMIILLSIESIT YR+ F+L
Sbjct: 9 AKAAEPFVCGGSAATFASCVIHPIDLAKVRMQLYGQLNPGKPVPSFTSILSTMVKNDGVSSVYKGVDAAIGRQMVYGTARIGLHRTISNKMVEWNEGKPINFLAKTLSGMASGSIAVCIGTPFDIALVRLQADSMAPVEERRNYKNVFDALIRTTKEEGVKALYKGLMPNILRGMSMNVGMLACYDQAK-EVVAKILNDPMTDGPSLPTKMGSSCVAGFTAALFSLPFDLIKSRLMAQKPHPETGVMPYSGIFDCCVKIFKVEGPLGFFSGFSAYYGRCAPHAMIILLSIESITQGYRKTFNL 310
BLAST of mRNA_A-nodosum_M_contig119.59.2 vs. uniprot
Match: A0A7S3DW56_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DW56_9STRA) HSP 1 Score: 382 bits (980), Expect = 1.900e-121 Identity = 192/302 (63.58%), Postives = 233/302 (77.15%), Query Frame = 3
Query: 312 VAAAIQPFVCGGMAACFASCCIHPIDLAKVRIQLLGSMSPDVKKPSFPALLTHMVRTEGIGSVYAGLSASIMRQAIYGTARIGLHRSFSDKLVEMNEGKPIPFWMKTLSGMGSGAIAVTIGTPMDVALVRMQSDSMKPANERRNYKHVIDALRRCAAEEGIGALYAGLAPNILRGMSMNVGMMACYDQAKGTMMQQVFNETDEKNPSLPVKMTSSAIAGFTAAAFSLPFDMLKSRLQDMKPDS-KGNMPYKGLMDCARGIVRKEGPFAFWTGFTAYYGRCAPHAMIILLSIESITSAYRQVF 1214
+A +++PFVCGG AA AS IHPIDLAKVR+QL G M+P PSFP +++ MV +G SVY G+ A+I RQ +YGTARIGLHR+FSDKLVE+N GKPI F K LSGM SG+IAV IGTP D+ALVR+QSD M P +RRNYK+V DAL R ++EEG+GALY GL PN+LRGMSMNVGMMACYDQAK ++ + + PSLP ++ +SA AGFTAA FSLPFD++KSRL KPD G MPYKG++DC I +KEGP F++GF+AYYGRCAPHAMIILLSIESIT+ YR+ F
Sbjct: 3 IAKSLEPFVCGGAAATSASIVIHPIDLAKVRMQLFGQMNPGKPIPSFPTIISTMVTRDGPLSVYKGVDAAIGRQMVYGTARIGLHRTFSDKLVEINNGKPISFVQKALSGMASGSIAVCIGTPFDIALVRLQSDGMAPPEDRRNYKNVFDALIRTSSEEGVGALYKGLLPNVLRGMSMNVGMMACYDQAK-EVVASLLGDPMTDGPSLPTRLGASATAGFTAALFSLPFDLIKSRLMAQKPDPLTGEMPYKGILDCTVQIAKKEGPLGFFSGFSAYYGRCAPHAMIILLSIESITNLYRKAF 303 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig119.59.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig119.59.2 >prot_A-nodosum_M_contig119.59.2 ID=prot_A-nodosum_M_contig119.59.2|Name=mRNA_A-nodosum_M_contig119.59.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=310bp MVAQQVAAAIQPFVCGGMAACFASCCIHPIDLAKVRIQLLGSMSPDVKKPback to top mRNA from alignment at A-nodosum_M_contig119:571310..576935- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig119.59.2 ID=mRNA_A-nodosum_M_contig119.59.2|Name=mRNA_A-nodosum_M_contig119.59.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5626bp|location=Sequence derived from alignment at A-nodosum_M_contig119:571310..576935- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig119:571310..576935- >mRNA_A-nodosum_M_contig119.59.2 ID=mRNA_A-nodosum_M_contig119.59.2|Name=mRNA_A-nodosum_M_contig119.59.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=930bp|location=Sequence derived from alignment at A-nodosum_M_contig119:571310..576935- (Ascophyllum nodosum dioecious)back to top |