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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1264 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 1227 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866595.1849248-UTR-A-nodosum_M_contig118:19155..19186 | 1680866595.1849248-UTR-A-nodosum_M_contig118:19155..19186 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig118 19156..19186 + |
| 1680866595.2164814-UTR-A-nodosum_M_contig118:20532..20538 | 1680866595.2164814-UTR-A-nodosum_M_contig118:20532..20538 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig118 20533..20538 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866595.1960597-CDS-A-nodosum_M_contig118:19186..20054 | 1680866595.1960597-CDS-A-nodosum_M_contig118:19186..20054 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig118 19187..20054 + |
| 1680866595.2068176-CDS-A-nodosum_M_contig118:20173..20532 | 1680866595.2068176-CDS-A-nodosum_M_contig118:20173..20532 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig118 20174..20532 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig118.2.1 >prot_A-nodosum_M_contig118.2.1 ID=prot_A-nodosum_M_contig118.2.1|Name=mRNA_A-nodosum_M_contig118.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=409bp
MVNMKSRKCRTEGCSKQPSFGVAGSRAAEYCKQHAPEGMVNVIRKMCRTE
GCGKQPSLGVPGSKTAEYCTQHAPDGMVNVKDRKCRSEGCTKQPSFGVAG
SRTAEYCTQHASNGMVNVKDRKCRSEGCIKRPSFGVAGSKAAEYCTQHAP
NGMINIKSRKCLTEGCSKSPSFGVAGSRAAEYCTQHAPEGMINIKRRKCR
TEGCSKGPSFGVAGTRAAEYCAQHAPKRMANIKSRKCKTEDCSKGPSFGE
AGLREAEYCRQHAPDGMVIIKNIMSRSEVCSKQPSFGVAGAHKTKYCVQH
NMPRCGVEGCGGREIGPDHSGKETVGDASPSSSKHEIVQSPPAQASPLWG
GSRGARKQVEYLHIVPTALEQAVALESAAEAVTMPEMEGSKSPFKRDSSV
KTEVQVSL* back to topmRNA from alignment at A-nodosum_M_contig118:19156..20538+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig118.2.1 ID=mRNA_A-nodosum_M_contig118.2.1|Name=mRNA_A-nodosum_M_contig118.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1383bp|location=Sequence derived from alignment at A-nodosum_M_contig118:19156..20538+ (Ascophyllum nodosum dioecious)
GGAGTACTGCACACAGCACACACCGGAGGGAATGGTTAACATGAAGAGCA
GAAAGTGCCGAACCGAAGGCTGCAGCAAGCAACCGTCGTTCGGAGTGGCC
GGCTCACGAGCGGCGGAGTACTGCAAACAGCACGCTCCGGAGGGAATGGT
CAACGTCATTAGGAAAATGTGCAGAACCGAAGGCTGCGGTAAGCAACCGT
CGCTCGGAGTTCCAGGTTCGAAAACGGCGGAGTACTGCACACAACACGCA
CCGGATGGGATGGTCAACGTCAAGGATAGAAAGTGCAGAAGCGAAGGCTG
CACCAAGCAACCATCGTTCGGAGTGGCCGGCTCAAGAACGGCGGAGTACT
GCACACAACACGCTTCGAATGGGATGGTCAACGTCAAGGATAGAAAATGC
AGAAGCGAAGGCTGCATCAAGCGACCGTCGTTCGGAGTGGCCGGCTCAAA
AGCAGCGGAGTACTGCACACAGCACGCACCGAATGGAATGATCAACATAA
AGAGCAGGAAGTGCCTAACCGAAGGCTGCAGCAAAAGTCCGTCGTTTGGA
GTGGCTGGCTCAAGAGCGGCGGAGTACTGCACACAGCACGCACCGGAGGG
AATGATCAACATAAAGAGAAGAAAGTGCCGAACCGAAGGCTGTAGCAAAG
GTCCGTCGTTTGGGGTAGCCGGTACAAGAGCGGCCGAGTATTGCGCACAA
CATGCACCGAAGAGGATGGCCAACATAAAGAGCAGAAAGTGCAAAACCGA
AGACTGCAGCAAAGGTCCGTCGTTTGGAGAAGCTGGCTTGAGAGAGGCGG
AGTACTGCAGACAGCACGCGCCGGATGGGATGGTCATTATCAAGAACATA
ATGTCCAGAAGCGAAGTTTGTAGCAAGCAACCGTCGTTCGGAGTGGCAGG
TACGAAATAGTACTAGTAGGGTTTTGTGCAAAGCATGCCCCTGATGAGAT
AGTCAACGTCAAGAGCAGAATGTGCAAAACCAAAGGGCCCAGCACTGTTT
TGGCGTTTGGCGTAGCAGGTGCGCACAAGACCAAGTACTGTGTGCAGCAC
AACATGCCAAGATGCGGTGTCGAAGGATGCGGGGGGAGAGAGATCGGTCC
AGACCACTCCGGGAAGGAAACCGTTGGTGACGCAAGTCCGAGTAGCTCAA
AGCACGAAATCGTCCAATCTCCCCCCGCCCAGGCAAGCCCTCTCTGGGGT
GGTAGTCGAGGCGCTCGTAAGCAGGTGGAATACCTACATATTGTGCCCAC
GGCTTTGGAGCAAGCCGTCGCACTAGAGTCGGCTGCAGAAGCGGTGACTA
TGCCGGAGATGGAGGGGTCAAAGTCTCCCTTCAAGCGAGATTCTTCTGTG
AAGACAGAGGTGCAGGTCTCCTTGTAGTCAGGT back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig118:19156..20538+ >mRNA_A-nodosum_M_contig118.2.1 ID=mRNA_A-nodosum_M_contig118.2.1|Name=mRNA_A-nodosum_M_contig118.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1227bp|location=Sequence derived from alignment at A-nodosum_M_contig118:19156..20538+ (Ascophyllum nodosum dioecious)
ATGGTTAACATGAAGAGCAGAAAGTGCCGAACCGAAGGCTGCAGCAAGCA
ACCGTCGTTCGGAGTGGCCGGCTCACGAGCGGCGGAGTACTGCAAACAGC
ACGCTCCGGAGGGAATGGTCAACGTCATTAGGAAAATGTGCAGAACCGAA
GGCTGCGGTAAGCAACCGTCGCTCGGAGTTCCAGGTTCGAAAACGGCGGA
GTACTGCACACAACACGCACCGGATGGGATGGTCAACGTCAAGGATAGAA
AGTGCAGAAGCGAAGGCTGCACCAAGCAACCATCGTTCGGAGTGGCCGGC
TCAAGAACGGCGGAGTACTGCACACAACACGCTTCGAATGGGATGGTCAA
CGTCAAGGATAGAAAATGCAGAAGCGAAGGCTGCATCAAGCGACCGTCGT
TCGGAGTGGCCGGCTCAAAAGCAGCGGAGTACTGCACACAGCACGCACCG
AATGGAATGATCAACATAAAGAGCAGGAAGTGCCTAACCGAAGGCTGCAG
CAAAAGTCCGTCGTTTGGAGTGGCTGGCTCAAGAGCGGCGGAGTACTGCA
CACAGCACGCACCGGAGGGAATGATCAACATAAAGAGAAGAAAGTGCCGA
ACCGAAGGCTGTAGCAAAGGTCCGTCGTTTGGGGTAGCCGGTACAAGAGC
GGCCGAGTATTGCGCACAACATGCACCGAAGAGGATGGCCAACATAAAGA
GCAGAAAGTGCAAAACCGAAGACTGCAGCAAAGGTCCGTCGTTTGGAGAA
GCTGGCTTGAGAGAGGCGGAGTACTGCAGACAGCACGCGCCGGATGGGAT
GGTCATTATCAAGAACATAATGTCCAGAAGCGAAGTTTGTAGCAAGCAAC
CGTCGTTCGGAGTGGCAGGTGCGCACAAGACCAAGTACTGTGTGCAGCAC
AACATGCCAAGATGCGGTGTCGAAGGATGCGGGGGGAGAGAGATCGGTCC
AGACCACTCCGGGAAGGAAACCGTTGGTGACGCAAGTCCGAGTAGCTCAA
AGCACGAAATCGTCCAATCTCCCCCCGCCCAGGCAAGCCCTCTCTGGGGT
GGTAGTCGAGGCGCTCGTAAGCAGGTGGAATACCTACATATTGTGCCCAC
GGCTTTGGAGCAAGCCGTCGCACTAGAGTCGGCTGCAGAAGCGGTGACTA
TGCCGGAGATGGAGGGGTCAAAGTCTCCCTTCAAGCGAGATTCTTCTGTG
AAGACAGAGGTGCAGGTCTCCTTGTAG back to top
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