mRNA_A-nodosum_M_contig1175.7.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1175.7.1 vs. uniprot
Match: A0A6H5JKZ2_9PHAE (DLH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKZ2_9PHAE) HSP 1 Score: 359 bits (922), Expect = 4.470e-121 Identity = 195/300 (65.00%), Postives = 226/300 (75.33%), Query Frame = 1
Query: 1 KVIREAWAAEVSPSDAGQGGG-------WTIRRQIVEYRDGETTLEGLYARPEGDGLSERIPGVIVAHTAVGSRSYFILWKLDSIARLGYAAFALDMFGAGRALWDRAESLAARRPITEDRSLLQTRALAAVQTLGRLEGVDSDRVAAVGYCFGGMVVLDLARM-----------TPAVPGLKAVASLHGILAPMLPGAGKNP----AAENAAVG-PKVLVLHASDDPFVRPEQVQAMEEEFARRQANLEIVRYGGTARHAFTRPEKTEEADVAAGLSYDSHADADSWRRVVELLREGLA 831
KVIR AWA + D G G W+IRR +VEY DG+T L+GLY RPEG+GL +R+PGVI+AHTAVG + ILWKLD IA LGYAAFALDMFG GRALW+RAESLAARRPITEDRSL+Q RA AAV+TL ++EG+D +R+AAVGYCFGGM VLDLARM TP P LKAVASLHGILAP+ PG G AA++AA+ P+VLVLHA+ DPFV PEQV+AMEEE +RR A LE+VRYGG+A HAFTRPEKT + D AGLSY +A+ DSWRRVVELLRE A
Sbjct: 71 KVIRAAWAVATTNPDTTNGRGASSSSASWSIRRSVVEYNDGDTALQGLYTRPEGEGLPDRLPGVILAHTAVGPQEDMILWKLDQIALLGYAAFALDMFGTGRALWNRAESLAARRPITEDRSLMQARATAAVRTLSQMEGIDEERLAAVGYCFGGMTVLDLARMVRPDGDDAGANTP--PRLKAVASLHGILAPISPGTGGEDGAGLAADDAALAVPRVLVLHATADPFVPPEQVRAMEEELSRRGARLEVVRYGGSAMHAFTRPEKTSQVDRDAGLSYCKYAEEDSWRRVVELLREEFA 368
BLAST of mRNA_A-nodosum_M_contig1175.7.1 vs. uniprot
Match: A0A836CLU0_9STRA (Dienelactone hydrolase family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLU0_9STRA) HSP 1 Score: 197 bits (500), Expect = 2.440e-58 Identity = 122/255 (47.84%), Postives = 156/255 (61.18%), Query Frame = 1
Query: 70 IRRQIVEYRDGE-TTLEGLYARPEGDGLSERIPGVIVAHTAVGSRSYFILWKLDSIARLGYAAFALDMFGAGRALWDRAESLAARRPITEDRSLLQTRALAAVQTLGRLEGVDSDRVAAVGYCFGGMVVLDLARMTPAVPGLKAVASLHGILAPMLPGAGKNPAAENAAVGPKVLVLHASDDPFVRPEQVQAMEEEFARRQAN-LEIVRYGGTARHAFTRPEKTEEADVAAGLSYDSHADADSWRRVVELLREGL 828
++RQIV Y D L+G RP +E +P V+VAHTAVG + +L LD +A LGY AF LDMFGAG+A+WDR +SLAAR P+T DRSLL RA AA+ +L GVD+ RVA VGYCFGG+V LD R A G+ A + HGILAP P + ++ + G +VLVLH DPFV P+QV+A E E A ++ Y G ARHAFTRPEK ++D +AGL YD+ A W + L +
Sbjct: 39 LQRQIVPYIDHTGLPLQGFVVRPAAQA-AESLPCVLVAHTAVGIQDDLLLQILDGVAGLGYVAFGLDMFGAGQAVWDREQSLAARAPLTSDRSLLARRAEAALHCATQLRGVDARRVAVVGYCFGGIVALDTVR---AGCGIAAAITFHGILAPPPPDQDLS-WCKHYSTGCRVLVLHGGADPFVPPDQVRAFEAEMAAAGVQQCSVIVYDG-ARHAFTRPEKVLDSDRSAGLFYDAAAAEAGWAAMRGCLEQAF 287
BLAST of mRNA_A-nodosum_M_contig1175.7.1 vs. uniprot
Match: A0A7S0HUL7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HUL7_9CRYP) HSP 1 Score: 185 bits (469), Expect = 8.960e-54 Identity = 111/254 (43.70%), Postives = 149/254 (58.66%), Query Frame = 1
Query: 70 IRRQIVEYRDGETTLEGLYARPEGDGLSERIPGVIVAHTAVGSRSYFILWKLDSIARLGYAAFALDMFGAGRALWDRAESLAARRPITEDRSLLQTRALAAVQTLGRLEGVDSDRVAAVGYCFGGMVVLDLARMTPAVPGLKAVASLHGILA-PMLPGAGKNPAAENAAVGPKVLVLHASDDPFVRPEQVQAMEEEFARRQANLEIVRYGGTARHAFTRPEKTEEADVAAGLSYDSHADADSWRRVVELLREGL 828
+++ V Y +G L G P D ++++P V++ HTAVG + F+ WKL+++A LG+ AF DMFG GRALWDR E+L ARR + DR + R AA T+ L VD A+G+CFGGM VLDLAR + +P L+A S HGIL P LP + V ++LV H DDPFV E + E R++N + Y G A+HAFTRPEKTE +D +AGL Y+ AD DS R+ +LR L
Sbjct: 36 LKKSSVSYSEGGRELMGEACWP--DVGNQKMPAVLLVHTAVGLQEDFMRWKLEAVASLGFVAFGADMFGTGRALWDREEALEARRELVCDRRRMIDRVKAAATTMMSLPQVDPRGFGALGFCFGGMAVLDLAR-SGCMPNLEATVSFHGILDDPDLPD---DYGGREGPVPGEILVCHGEDDPFVSSENLNLFLENLKLRKSNFHLQAYPG-AKHAFTRPEKTEPSDFSAGLFYNEQADRDSSERMKGMLRRRL 282
BLAST of mRNA_A-nodosum_M_contig1175.7.1 vs. uniprot
Match: A0A0G4EJ35_VITBC (DLH domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EJ35_VITBC) HSP 1 Score: 181 bits (458), Expect = 5.900e-52 Identity = 114/260 (43.85%), Postives = 149/260 (57.31%), Query Frame = 1
Query: 61 GWTIRRQIVEYRDGETTLEGLYARPEGDGLSERI----PGVIVAHTAVGSRSYFILWKLDSIARLGYAAFALDMFGAGRALWDRAESLAARRPITEDRSLLQTRALAAVQTLGRLEGVDSDRVAAVGYCFGGMVVLDLARMTPAVPGLKAVASLHGILAPMLPGAGKNPAAENAAVGPK--VLVLHASDDPFVRPEQVQAMEEEFARRQANLEIVRYGGTARHAFTRPEKTEEADVAAGLSYDSHADADSWRRVVELLRE 822
GWT ++ V Y+D T L GL E D S +I P V+V TAVG R F+ LD A LGY AF +DM+G G A+WD+ S A R+P+T DR+ LQ R +AA Q L V D +A VGYCFGGM LDLAR VP +K V S HG+L PA + G VLV H SDDPF+ P+Q QA ++E + ++ + +I YGG A+H+FTRPEK +AD AGL Y ++ S+R L++
Sbjct: 41 GWTYKQTDVAYQDEGTELMGLAVWVERDDASRQILGERPCVLVCPTAVGLREDFLFGALDRYASLGYVAFGVDMYGEG-AVWDKGRSRAIRQPLTADRTKLQRRMVAAYQAAQSLPQVQEDNIAVVGYCFGGMCALDLARA--GVP-MKGVVSFHGVL--------DRPAVDKVPGGLSCPVLVHHGSDDPFISPDQFQAFQQELSDQRTDWQIHIYGG-AKHSFTRPEKVTQADRDAGLQYCPKSERRSYRTTKAFLQD 287
BLAST of mRNA_A-nodosum_M_contig1175.7.1 vs. uniprot
Match: A0A7S1HA30_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HA30_HEMAN) HSP 1 Score: 175 bits (444), Expect = 4.750e-51 Identity = 107/204 (52.45%), Postives = 128/204 (62.75%), Query Frame = 1
Query: 208 FILWKLDSIARLGYAAFALDMFGAGRALWDRAESLAARRPITEDRSLLQTRALAAVQTLGRLEGVDSDRVAAVGYCFGGMVVLDLARMTPAVPGLKAVASLHGILAPMLPGAGKNPAAENAAVGPKVLVLHASDDPFVRPEQVQAMEEEFARRQA-NLEIVRYGGTARHAFTRPEKTEEADVAAGLSYDSHADADSWRRVVELL 816
F+ WKLD +A GY AF +DMFGAGRALWD+ E+LAAR+P+ EDRS + R + A +T +E DS RV A+GYCFGGM VLDLAR + LKA SLHGIL + P + VG KVLV H DPFV PE ++ E + A R A +L I Y G+ +HAFTRPEKT E D AAGL Y ADA SW LL
Sbjct: 3 FMFWKLDKLASQGYLAFGVDMFGAGRALWDKEEALAARKPLREDRSQMIERMMCAYETACSMEVADSARVGAIGYCFGGMAVLDLAR-SGLPKSLKATVSLHGILDRL-----DTPPTD--VVG-KVLVCHGGSDPFVTPEMLRDFESDMAARNAEDLHIHTYSGS-KHAFTRPEKTTEGDSAAGLYYCELADAASWAAASALL 196
BLAST of mRNA_A-nodosum_M_contig1175.7.1 vs. uniprot
Match: A0A7S1J2W1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J2W1_9EUGL) HSP 1 Score: 169 bits (429), Expect = 8.560e-49 Identity = 104/210 (49.52%), Postives = 127/210 (60.48%), Query Frame = 1
Query: 226 DSIARLGYAAFALDMFGAGRALWDRAESLAARRPITEDRSLLQTRALAAV---------QTLGRLEGVDSDRVAAVGYCFGGMVVLDLARMTPAVPGLKAVASLHGILAPMLPGAGKNPAAENAAVGPKVLVLHASDDPFVRPEQVQAMEEEFARRQANLEIVRYGGTARHAFTRPEKTEEADVAAGLSYDSHADADSWRRVVELLREGL 828
+++A LGY AFA+DM GAGRALWD AE+ AR P+ EDR LL++R AA+ Q LG +D DRVAAVGYCFGG+ VLDLAR PGL+ V S HGIL G P E A+ P++LV + DPFV P++ + E RR A LE V + G ARH FTRPEK + AD AAG YD ADA SW + L + L
Sbjct: 1 EALASLGYVAFAVDMLGAGRALWDGAEAKTARAPLYEDRRLLRSRMQAALTAASADSFAQALGPNVALDLDRVAAVGYCFGGLCVLDLARGN--APGLRGVVSFHGIL-----DGGGLPDPETDALRPRILVHNGDADPFVPPDKREQFLAEMGRRHAPLEFVSHPG-ARHGFTRPEKVQPADFAAGFGYDPQADAASWGSMKAFLADVL 202
BLAST of mRNA_A-nodosum_M_contig1175.7.1 vs. uniprot
Match: A0A661FZ67_9GAMM (Carboxymethylenebutenolidase n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661FZ67_9GAMM) HSP 1 Score: 159 bits (402), Expect = 2.610e-44 Identity = 103/251 (41.04%), Postives = 139/251 (55.38%), Query Frame = 1
Query: 70 IRRQIVEYRDGETTLEGLYARPEGDGLSERIPGVIVAHTAVGSRSYFILWKLDSIARLGYAAFALDMFGAGRALWDRAESLAARRPITEDRSLLQTRALAAVQTLGRLEGVDSDRVAAVGYCFGGMVVLDLARMTPAVPGLKAVASLHGILAPMLPGAGKNPAAENAAVGPKVLVLHASDDPFVRPEQVQAMEEEFARRQANLEIVRYGGTARHAFTRPEKTEEADVAAGLSYDSHADADSWRRVVELLRE 822
I+ Q VEY+DG+ LEG +A D S+R PGV++AH G RS F K +S+A LGYA FALD++G G + E+ A +P+ +DR LQ R A++ + + E VD RVAA+G+CFGG+ VLDLAR + G VAS HG+ P AG + KVLV+H DDP +P+QV + +E A+ +I YG T HAFT P D G Y+ AD SW+ + L E
Sbjct: 3 IQTQTVEYKDGDVVLEGYFAWD--DTNSDRRPGVLIAHAWAG-RSEFEEGKAESLAELGYAGFALDLYGKGMRGSNAEENTALMQPLLDDRKTLQRRMTLALEQIRKQEIVDDSRVAAMGFCFGGLSVLDLARTGAELSG---VASFHGLFNPPGNTAGNK-------INAKVLVMHGWDDPMAKPDQVLTLADELTAMGADWQIHGYGNTM-HAFTNPAAN---DPGFGTVYNERADRRSWQSLQLFLAE 236
BLAST of mRNA_A-nodosum_M_contig1175.7.1 vs. uniprot
Match: A0A6L8HPZ1_9BACT (Dienelactone hydrolase family protein n=3 Tax=Acidobacteriia bacterium TaxID=2081523 RepID=A0A6L8HPZ1_9BACT) HSP 1 Score: 158 bits (400), Expect = 5.650e-44 Identity = 105/253 (41.50%), Postives = 136/253 (53.75%), Query Frame = 1
Query: 70 IRRQIVEYRDGETTLEGLYARPEGDGLSERIPGVIVAHTAVGSRSYFILWKLDSIARLGYAAFALDMFGAGRALWDRAESLAARRPITEDRSLLQTRALAAVQTLGRLEGVDSDRVAAVGYCFGGMVVLDLARMTPAVPGLKAVASLHGILAPMLPGAGKNPAAENAAVGPKVLVLHASDDPFVRPEQVQAMEEEFARRQANLEIVRYGGTARHAFTRPEKTEEADVAAGLSYDSHADADSWRRVVELLREGL 828
I + EY DG T L G A D ++ PGV++AHT G F K IA LGY A A+DM+G G E+ + EDRSLLQ R AA+ L GVDS+R AA+GYCFGG+ VLDLAR + +A S HG+L P PG E A V P+VLVLH DDP +P+ V+A+ EEF R A+ ++ YG T HAFT PE ++ G Y++ AD SW + + L +
Sbjct: 3 ITTEAFEYSDGSTLLRGQLACD--DTWTDPRPGVLIAHTWAGCGP-FEQGKAADIAELGYVALAVDMYGGGIVGHSTEENAKLMSVVLEDRSLLQRRMTAALDALKAFPGVDSERTAAIGYCFGGLCVLDLARTGAS---FQAAVSFHGLLNP--PGN-----IEVADVSPRVLVLHGWDDPMAKPDSVEALAEEFTRAGADWQVHAYGRTM-HAFTNPEAN---NLDMGTVYNAQADRRSWNSMRQFLSDSF 238
BLAST of mRNA_A-nodosum_M_contig1175.7.1 vs. uniprot
Match: A0A148N9A1_9GAMM (Carboxymethylenebutenolidase n=1 Tax=Methylothermaceae bacteria B42 TaxID=1798802 RepID=A0A148N9A1_9GAMM) HSP 1 Score: 155 bits (392), Expect = 8.860e-43 Identity = 104/252 (41.27%), Postives = 139/252 (55.16%), Query Frame = 1
Query: 67 TIRRQIVEYRDGETTLEGLYARPEGDGLSERIPGVIVAHTAVGSRSYFILWKLDSIARLGYAAFALDMFGAGRALWDRAESLAARRPITEDRSLLQTRALAAVQTLGRLEGVDSDRVAAVGYCFGGMVVLDLARMTPAVPGLKAVASLHGILAPMLPGAGKNPAAENAAVGPKVLVLHASDDPFVRPEQVQAMEEEFARRQANLEIVRYGGTARHAFTRPEKTEEADVAAGLSYDSHADADSWRRVVELLRE 822
TI+ Q VEY++GET L GL A D + +PGV+V+HT G R F K ++A LGYA FALD++G G+ E+ +P +DR+LLQ R AA++ L VD+ R+AA+G+CFGG+ VLDLAR+ L V S HG+L P PG + + KVLVLH DDP V E V A+E+E A+ ++ YG T HAFT P+ D G Y+ AD SW + L E
Sbjct: 2 TIQTQTVEYQEGETRLIGLLAWD--DAQTAPMPGVLVSHTWAG-RDDFACNKAKAVAELGYAGFALDLYGEGKVGSGPEENAKLMQPFLDDRALLQRRMSAALEALRAQRQVDNKRIAAMGFCFGGLCVLDLARIGA---DLNGVVSFHGLLNP--PGN-----TQGTKIKAKVLVLHGHDDPMVPVEDVVALEQELTEAGADWQVHVYGNTM-HAFTNPKAN---DPGFGTVYNPVADRRSWISLQNFLEE 236
BLAST of mRNA_A-nodosum_M_contig1175.7.1 vs. uniprot
Match: A0A0W1AFP7_9GAMM (Dienelactone hydrolase family protein n=1 Tax=Legionella worsleiensis TaxID=45076 RepID=A0A0W1AFP7_9GAMM) HSP 1 Score: 155 bits (391), Expect = 1.150e-42 Identity = 101/249 (40.56%), Postives = 137/249 (55.02%), Query Frame = 1
Query: 85 VEYRDGETTLEGLYARPEGDGLSERIPGVIVAHTAVGSRSYFILWKLDSIARLGYAAFALDMFGAGRALWDRAESLAARRPITEDRSLLQTRALAAVQTLGRLEGVDSDRVAAVGYCFGGMVVLDLARMTPAVPGLKAVASLHGILAPMLPGAGKNPAAENAAVGPKVLVLHASDDPFVRPEQVQAMEEEFARRQANLEIVRYGGTARHAFTRPEKTEEADVAAGLSYDSHADADSWRRVVELLREGLA 831
++Y+DG T G A LS +P V+V H VG RS + K + +A +GY FA+DM+G R D+ A P+ +DR +L +R +AAVQ L + D ++AA+GYCFGG+ VLDLAR A+ K V S HG+L P K+ E + K+LVLH DDP V PEQVQ +E +R+A+ +I YG T +H+FT PE D GL Y+ AD SW + LRE A
Sbjct: 7 IKYKDGTTECRGFIAYDSS--LSHPLPAVMVVHDWVG-RSERMCTKAEELAAMGYVGFAVDMYGDARTGADKTARRALMAPLMQDRRILLSRIMAAVQFLNQFACADKAKIAAIGYCFGGLCVLDLARSLAAI---KGVVSFHGLLHPP-----KHVPQE--PIKSKILVLHGYDDPLVPPEQVQQFADEMNQRKADWQIHMYGHT-QHSFTNPEAH---DDEMGLHYNERADHRSWTTTLTFLRELFA 238 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1175.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1175.7.1 >prot_A-nodosum_M_contig1175.7.1 ID=prot_A-nodosum_M_contig1175.7.1|Name=mRNA_A-nodosum_M_contig1175.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=278bp KVIREAWAAEVSPSDAGQGGGWTIRRQIVEYRDGETTLEGLYARPEGDGLback to top mRNA from alignment at A-nodosum_M_contig1175:87241..89228+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1175.7.1 ID=mRNA_A-nodosum_M_contig1175.7.1|Name=mRNA_A-nodosum_M_contig1175.7.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1988bp|location=Sequence derived from alignment at A-nodosum_M_contig1175:87241..89228+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1175:87241..89228+ >mRNA_A-nodosum_M_contig1175.7.1 ID=mRNA_A-nodosum_M_contig1175.7.1|Name=mRNA_A-nodosum_M_contig1175.7.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=834bp|location=Sequence derived from alignment at A-nodosum_M_contig1175:87241..89228+ (Ascophyllum nodosum dioecious)back to top |