mRNA_A-nodosum_M_contig1175.22.3 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1175.22.3 vs. uniprot
Match: D8LBZ9_ECTSI (TLDc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBZ9_ECTSI) HSP 1 Score: 410 bits (1053), Expect = 3.720e-140 Identity = 211/309 (68.28%), Postives = 243/309 (78.64%), Query Frame = 1
Query: 115 LQDTASFT----ASWSPHGSYSRRRVELDDVMTVFEGKYC--GGARGHVRKELRAKRDVEEEQ---ESQDIVEKLFGMFFGQKEDAPA-NLKRMTIESFPDQYPAEKVLQADPVPGDSKDVAVIRPLLKQTELESRKLKLAFDAKRNGWKAAAFHKGVDFKGPGIVVAKTKGGAVVGGYNPKGWAGYGEYRPGISAFLFTWRDGDTSKRAVKLRKIGGAGLAVWDRPECGPLFGSEGFGVGLQQGSERLGRSKLGSYYERLPG--GVNSIFSPGDSGGMAELVDLRVYVGVYEKGETIPFDDAIPLSIT 1005
LQ SFT A H S S E + C +RG +RAK EE+ E QD++EK F MFFG K+DAP +L R+T++ FPDQYPAEK+LQA+PV GDSKD+AVIRPLLKQTELE RKLKL +DAKRNGWK AAFHKGVDFKGPG+VV KTKGGAVVGGYNPKGW GYGEYRPG+SAFLFTWRDGDT+KRA+KLRKIGGAGLAVWD+PECGPLFGS+GFGVG+Q+GSER+GRSKLGSYYERLP G SIF+PGD+GG+AE+VDL+ YVGVYE+GE IPFDDAIP S++
Sbjct: 14 LQGVNSFTVPPQALGKTHRSLSAPSSATVVTRVEHEDRTCRTSSSRGSRSTCVRAKGGTGEEEAGEEQQDVIEKFFSMFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDAKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTNKRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQKGSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGEKIPFDDAIPFSLS 322
BLAST of mRNA_A-nodosum_M_contig1175.22.3 vs. uniprot
Match: A0A6V1NAM7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NAM7_HETAK) HSP 1 Score: 332 bits (852), Expect = 6.560e-110 Identity = 164/253 (64.82%), Postives = 196/253 (77.47%), Query Frame = 1
Query: 253 LRAKRDVEEEQESQDIVEKLFGMFFGQKEDAPANLKRMTIESFPDQYPAEKVLQADPVPGDSKDVAVIRPLLKQTELESRKLKLAFDAKRNGWKAAAFHKGVDFKGPGIVVAKTKGGAVVGGYNPKGWAGYGEYRPGISAFLFTWRDGDTSK--RAVKLRKIGGAGLAVWDRPECGPLFGSEGFGVGLQQGSERLGRSKLGSYYERLPGGVNSIFSPGDSGGMAELVDLRVYVGVYEKGETIPFDDAIPLSIT 1005
L K + + QE QD VEKLF FFGQKE+ P LKR E+FPDQ+PA K ADPVPGDSKD+AV RPLLKQTELESRKLKL +DA +NGW AFHKGVD GPG++VAKTKGGAV+GGYNPKGW GYGEYRPG+SAFLFTW DG+T +A+KLRKIGGAGLAV D+PE GP+FG++G + + +R+ + LGSYYER+PGG S+F+ G+S ELVDL+ YVG+Y KGE IPF+DAIP S+T
Sbjct: 54 LLRKIQMNQGQEDQDPVEKLFSFFFGQKEEEPLGLKRFNKETFPDQFPATKTEFADPVPGDSKDMAVFRPLLKQTELESRKLKLVYDANKNGWNPTAFHKGVDKLGPGVIVAKTKGGAVIGGYNPKGWVGYGEYRPGLSAFLFTWPDGNTVDYTKALKLRKIGGAGLAVIDKPEEGPVFGADGLCIRMAPKKQRIAQCSLGSYYERMPGGKKSLFAQGESLANTELVDLKAYVGIYAKGEEIPFNDAIPFSLT 306
BLAST of mRNA_A-nodosum_M_contig1175.22.3 vs. uniprot
Match: A0A835YK91_9STRA (TLDc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK91_9STRA) HSP 1 Score: 313 bits (802), Expect = 3.770e-103 Identity = 159/249 (63.86%), Postives = 189/249 (75.90%), Query Frame = 1
Query: 283 QESQDIVEKLFGMFFGQK---EDAPANLKRMTIESFPDQYPAEKVLQADPVPGDSKDVAVIRPLLKQTELESRKLKLAFDAKRNGWKAAAFHKGVDFKGPGIVVAKTKGGAVVGGYNPKGWAGYGEYRPGISAFLFTWRDGDTSKRAVKLRKIGGAGLAVWDRPECGPLFGSEGFGVGLQQGS-----ERLGRSKLGSYYERLPGGVNSIFSPGDSGGMAELVDLRVYVGVYEKGETIPFDDAIPLSIT 1005
++ QDIVE+ FG FGQK ++AP +KRMTIE+FPDQYPA K ADPV GD+KD+A+ RP L QT LE RKLK +DA R+GW+ AAFH+GVD KGPG+V+A+T GGAVVGGYNPKGW G EYRPG+SAFLFTW DGDTSKR VKLRK+GGAGLA +DR GP FGSEG V L GS ER+ R KLG+YYER+P G NS+F+PG+ G A+L +L+ +VGVY K E IPFDD I LS T
Sbjct: 4 EQQQDIVERFFGFVFGQKALDDEAPMGMKRMTIENFPDQYPATKDRWADPVAGDTKDMALFRPALAQTMLEKRKLKCVYDAARDGWRPAAFHRGVDKKGPGVVLARTAGGAVVGGYNPKGWVGESEYRPGLSAFLFTWPDGDTSKRPVKLRKVGGAGLACYDRASTGPFFGSEGLCVPLDAGSGGGGAERVARCKLGAYYERMPDGGNSMFAPGEKGA-AQLTELKAFVGVYAKDEEIPFDDVIYLSFT 251
BLAST of mRNA_A-nodosum_M_contig1175.22.3 vs. uniprot
Match: A0A7S4EVG5_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EVG5_CHRCT) HSP 1 Score: 265 bits (678), Expect = 9.710e-83 Identity = 137/244 (56.15%), Postives = 172/244 (70.49%), Query Frame = 1
Query: 274 EEEQESQDIVEKLFGMFFGQKEDAP-ANLKRMTIESFPDQYPAEKVLQADPVPGDSKDVAVIRPLLKQTELESRKLKLAFDAKRNGWKAAAFHKGVDFKGPGIVVAKTKGGAVVGGYNPKGWAGYGEYRPGISAFLFTWRDGDTSKRAVKLRKIGGAGLAVWDRPECGPLFGSEGFGVGLQQGSERLGRSKLGSYYERLPGGVNSIFSPGDSGGMAELVDLRVYVGVYEKGETIPFDDAIPLSI 1002
E+ + D +EKLFG+FFG ++ A L R S PD YPA K ADPV GD ++ ++RPLLK T LE L+LA+DA R+GW+AA FH+ VD GP IVV +T+GGAV GGY PKG+AGYGEYR I+AFL+TW DGDT + +KL+K+GGAGLA D PE GP FG+EG + + GSER+ RSKLG YYER+P G SIF+ D+ EL +LRVYVGV+ +GE IPFD AIP +I
Sbjct: 129 EDNKNEPDFIEKLFGVFFGAPQEGEVAGLARTA--SAPDTYPATKTEFADPVEGDIEEATILRPLLKNTNLEYLPLRLAYDANRDGWRAADFHEKVDKTGPCIVVCETEGGAVCGGYAPKGFAGYGEYRGSIAAFLYTWPDGDTDRAPIKLQKMGGAGLATIDEPETGPRFGAEGLSIPMDPGSERIARSKLGPYYERMPDGGGSIFAANDNSKRCELKELRVYVGVWPEGERIPFDGAIPFAI 370
BLAST of mRNA_A-nodosum_M_contig1175.22.3 vs. uniprot
Match: A0A7S1TFM7_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TFM7_9RHOD) HSP 1 Score: 254 bits (649), Expect = 2.560e-79 Identity = 133/259 (51.35%), Postives = 176/259 (67.95%), Query Frame = 1
Query: 253 LRAKRDVEEEQESQDIVEKLFGMFFGQKEDAPANLKRMTIESFPDQYPAEKVLQADPVPGDSKDVAVIRPLLKQTELESRKLKLAFDAKRNGWKAAAFHKGVDFKGPGIVVAKTKGGAVVGGYNPKGWAGYGEYRPGISAFLFTWRDGDTSKRAVKLRKIGGAGLAVWDRPECGPLFGSEGFGVGLQQ-------GSERLGRSKLGSYYERLPGGVNSIF--SPGDSGGMAELVDLRVYVGVYEKGETIPFDDAIPLSI 1002
L +K+D E E D++EKLFG+FFG+KE+ P LKR + FP+Q+PA A+ V GDSKDVA+ RPLL +T+L R L+L FD +GW A AFH+ VD +G G+V+ +T G V GGYNPKGW GYGE R +++FLFTW DG+T+K A+K+RK+G A L+V D PE GP FG++ + LQ GSE+ RSKLGSYYERLP G N +F S G + ++V+VGVYE+GE IPF+DA+P S+
Sbjct: 42 LESKQDGEGSGEDSDLLEKLFGVFFGKKEENPLGLKRFDRDRFPEQFPAPLDEFAEAVQGDSKDVALFRPLLARTQLCRRSLRLVFDTDSDGWTAEAFHRAVDRQGAGVVLLRTVDGVVCGGYNPKGWVGYGESRGSVASFLFTWPDGNTNKPAMKMRKVGQAYLSVLDNPETGPQFGADSLVIPLQDTRLRGPDGSEKQARSKLGSYYERLPDGRNCLFPDSSHPRKGYCYVDSVKVFVGVYEEGEQIPFNDALPFSL 300
BLAST of mRNA_A-nodosum_M_contig1175.22.3 vs. uniprot
Match: A0A5J4YZD4_PORPP (TLDc domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZD4_PORPP) HSP 1 Score: 248 bits (632), Expect = 1.080e-76 Identity = 128/258 (49.61%), Postives = 177/258 (68.60%), Query Frame = 1
Query: 256 RAKRDVEEEQESQDIVEKLFGMFFGQKEDAPANLKRMTIESFPDQYPAEKVLQADPVPGDSKD--VAVIRPLLKQTELESRKLKLAFDAKRNGWKAAAFHKGVDFKGPGIVVAKTKGGAVVGGYNPKGWAGYGEYRPGISAFLFTWRDGDTSKRAVKLRKIGGAGLAVWDRPECGPLFGSEGFGVGL-------QQGSERLGRSKLGSYYERLPGGVNSIFSPGDSGGMAELVDLRVYVGVYEKGETIPFDDAIPLSI 1002
R + ++ +E D++E+ +KE P L R + FP+ +PAE QADPV GD KD + +IRP++ +T L++R ++ FDA+ +GWKAA+FH+ VD +GP +V+A+TKGGAVVGGY+PKGW GYGE R I+AFLFTW DGDTSKR++KLRKIG A +A D+PE GP FG+EG + L G+ER+ R KLG+YY++LP G S+F+ G+ G + ELV LR +VG+Y E IPF DA+P S+
Sbjct: 49 RLGAEQQDAEEDLDVIERAMKWLGFKKEKTPFGLARFDRDKFPELWPAELEEQADPVEGDEKDPDLQLIRPMMARTSLQTRPMECVFDAEVHGWKAASFHRCVDKRGPAVVLARTKGGAVVGGYSPKGWVGYGESRGSIAAFLFTWPDGDTSKRSIKLRKIGMASMASMDQPESGPRFGAEGLTIPLLDARATEYDGTERVARCKLGTYYDKLPDGSKSLFAHGE-GLLTELVSLRAFVGIYGSDEEIPFLDALPFSL 305
BLAST of mRNA_A-nodosum_M_contig1175.22.3 vs. uniprot
Match: A0A7S2ZTI4_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZTI4_9RHOD) HSP 1 Score: 245 bits (626), Expect = 3.690e-76 Identity = 126/256 (49.22%), Postives = 178/256 (69.53%), Query Frame = 1
Query: 256 RAKRDVEEEQESQDIVEKLFGMFFGQKEDAPANLKRMTIESFPDQYPAEKVLQADPVPGDSKDVAVIRPLLKQTELESRKLKLAFDAKRNGWKAAAFHKGVDFKGPGIVVAKTKGGAVVGGYNPKGWAGYGEYRPGISAFLFTWRDGDTSKRAVKLRKIGGAGLAVWDRPECGPLFGSEGFGVGLQQ-------GSERLGRSKLGSYYERLPGGVNSIFSPGDSGGMAELVDLRVYVGVYEKGETIPFDDAIPLSI 1002
R++R V E+ D+ EKLFG+ FG++E+ P +R + FP+QY A ADPV D++++A+ RP+L +T+L +R+L+L +DA+ +GW A+AFH+ V+ KG G+V+A T+GG V GGYNPKGW GYGE R +++FLFTW GDTSK A+KLRK+GG ++V D PE GP FG++G V L GSE++ SKLG++YE P GV +FS + G +LV LR Y GVYE+GE IPFDDA+P+++
Sbjct: 27 RSRRVVMREK---DLGEKLFGLIFGKQEETPLGFQRFDRDRFPEQYEATLDEFADPVASDTEEMALFRPMLARTQLVTRELQLLYDAEEHGWTASAFHECVNKKGAGVVLAVTEGGTVCGGYNPKGWVGYGESRGSLASFLFTWPGGDTSKPAIKLRKVGGKSMSVLDDPETGPKFGADGLVVMLMSPFQTELDGSEKIASSKLGTFYEVRPDGVRHLFSKAE-GKKTKLVSLRAYFGVYEEGEEIPFDDAVPVAL 278
BLAST of mRNA_A-nodosum_M_contig1175.22.3 vs. uniprot
Match: A0A1X6PE37_PORUM (TLDc domain-containing protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PE37_PORUM) HSP 1 Score: 239 bits (611), Expect = 2.250e-74 Identity = 128/243 (52.67%), Postives = 158/243 (65.02%), Query Frame = 1
Query: 301 VEKLFGMFFGQKEDAPANLKRMTIESFPDQYPAEKVLQADPVPGDSKDVAVIRPLLKQTELESRKLKLAFDAKRNGWKAAAFHKGVDFKGPGIVVAKTKGGAVVGGYNPKGWAGYGEYRPGISAFLFTWRDGDTSK-RAVKLRKIGGAGLAVWDRPECGPLFGSEGFGVGLQ--------QGSERLGRSKLGSYYERLPGGVNSIFSPGDSGGMAELVDLRVYVGVYEKGETIPFDDAIPLSI 1002
+E+LF FFG E P LKR + FP+ YPA A PV GD +VA+ RPLL +T+L SR L+LA+DA +GW A AFH VDF+G +V+A+T GGAV GGYNPKGW GYGE R I+AFLFTW GDT+ R +KLRK+G AV D PE GP FG++ V LQ +R+ RSKLGSY+ERLP G N +F+P ++G L LRVY GVY GE IPF DA+P S+
Sbjct: 2 IERLFTFFFGAIEAEPLGLKRFDRDRFPELYPATLTETAPPVDGDGPEVALFRPLLARTQLASRPLRLAYDATVDGWTAEAFHGAVDFRGASVVLARTAGGAVCGGYNPKGWVGYGEARGSIAAFLFTWPTGDTAGGRPIKLRKVGRGATAVIDTPEDGPTFGADALVVPLQPPRAGWATDERDRVARSKLGSYFERLPNGRNHLFAPTEAGAGVTLEWLRVYQGVYADGEEIPFSDALPFSL 244
BLAST of mRNA_A-nodosum_M_contig1175.22.3 vs. uniprot
Match: A0A448ZH24_9STRA (TLDc domain-containing protein n=2 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZH24_9STRA) HSP 1 Score: 240 bits (612), Expect = 1.360e-73 Identity = 127/245 (51.84%), Postives = 162/245 (66.12%), Query Frame = 1
Query: 268 DVEEEQESQDIVEKLFGMFFGQKEDAPANLKRMTIESFPDQYPAEKVLQADPVPGDSKDVAVIRPLLKQTELESRKLKLAFDAKRNGWKAAAFHKGVDFKGPGIVVAKTKGGAVVGGYNPKGWAGYGEYRPGISAFLFTWRDGDTSKRAVKLRKIGGAGLAVWDRPECGPLFGSEGFGVGLQQGSERLGRSKLGSYYERLPGGVNSIFSPGDSGGMAELVDLRVYVGVYEKGETIPFDDAIPLSI 1002
D E + S D V+K+F +FFG+KE P +KR E FP+QYPA A+PV D KD+AV+RP+LK T LE+R LKL + A R+GW +FH+ VD G G+VV T+ G V GGYNPKGW GYGE R I+AFL+ + G TS+ KLRK+GG LA D PE GP FG++ + L++ S R+ RSKLGSYYER PGG N++F G G L DL+VY GVY +GE IPF DA P ++
Sbjct: 71 DEEPDDFSDDPVDKIFSVFFGKKEATPMGMKRFGRERFPEQYPAVLDEWAEPVASDDKDMAVLRPMLKNTNLETRGLKLTYSANRDGWDPVSFHRKVDKLGGGLVVCTTEDGLVCGGYNPKGWVGYGEARGSIAAFLYVFTKG-TSELPTKLRKVGGPSLAQQDLPETGPSFGADSLVIPLEKSSPRVARSKLGSYYERFPGGGNTLF--GKRGSSVRLKDLKVYHGVYAEGEYIPFTDAEPFAL 312
BLAST of mRNA_A-nodosum_M_contig1175.22.3 vs. uniprot
Match: A0A7S0DY99_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DY99_9CRYP) HSP 1 Score: 246 bits (627), Expect = 2.030e-73 Identity = 133/260 (51.15%), Postives = 166/260 (63.85%), Query Frame = 1
Query: 265 RDVEEEQESQDIVE-----KLFGMFFGQKEDAP--ANLKRMTIESFPDQYPAEKVLQADPVPGDSKDVAVIRPLLKQTELESRKLKLAFDAKRNGWKAAAFHKGVDFKGPGIVVAKTKGGAVVGGYNPKGWAGYGEYRPGISAFLFTWRDGDTSKRAVKLRKIGGAGLAVWDRPECGPLFGSEGFGVGLQQ-------GSERLGRSKLGSYYERLPGGVNSIFSPGDSGGMAELVDLRVYVGVYEKGETIPFDDAIPLSI 1002
+D+E + +Q + E K F FG+ +P LKR FP+ YPA A PV D RPLL +T LE R+LKL FDA R+GW AFH VD GPG+V+A+T+ GAVVGGYNPKGW GYGEYR I+AFLF+W DGDTSK A+KLRK+GGAGLA D PE GP FG++G + L+ G ERL R KLG YYE+ P G N+IF+ + A L DL+VYVGVYE+GE IP++DA+P +
Sbjct: 254 KDLESSRVAQSVAEPEGFEKFFASLFGKIGASPEQVGLKRFDQSKFPELYPATLTEFAAPVASDDATAQQFRPLLAKTSLEKRELKLVFDANRDGWTPGAFHGAVDKLGPGVVLARTEQGAVVGGYNPKGWVGYGEYRGSIAAFLFSWPDGDTSKPAIKLRKVGGAGLACIDDPESGPRFGADGLHIPLEAPRSEAEAGRERLARCKLGPYYEKRPDGSNTIFTKAEKA-TATLTDLKVYVGVYEEGEEIPYNDALPFQL 512 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1175.22.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1175.22.3 >prot_A-nodosum_M_contig1175.22.3 ID=prot_A-nodosum_M_contig1175.22.3|Name=mRNA_A-nodosum_M_contig1175.22.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=314bp MRVAGVITFALCVLLQLQDTASFTASWSPHGSYSRRRVELDDVMTVFEGKback to top mRNA from alignment at A-nodosum_M_contig1175:146313..151184- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1175.22.3 ID=mRNA_A-nodosum_M_contig1175.22.3|Name=mRNA_A-nodosum_M_contig1175.22.3|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4872bp|location=Sequence derived from alignment at A-nodosum_M_contig1175:146313..151184- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1175:146313..151184- >mRNA_A-nodosum_M_contig1175.22.3 ID=mRNA_A-nodosum_M_contig1175.22.3|Name=mRNA_A-nodosum_M_contig1175.22.3|organism=Ascophyllum nodosum dioecious|type=CDS|length=942bp|location=Sequence derived from alignment at A-nodosum_M_contig1175:146313..151184- (Ascophyllum nodosum dioecious)back to top |