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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 393 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 390 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866579.1253755-CDS-A-nodosum_M_contig1171:224894..225017 | 1680866579.1253755-CDS-A-nodosum_M_contig1171:224894..225017 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1171 224895..225017 + |
| 1680866579.137671-CDS-A-nodosum_M_contig1171:232698..232888 | 1680866579.137671-CDS-A-nodosum_M_contig1171:232698..232888 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1171 232699..232888 + |
| 1680866579.1464486-CDS-A-nodosum_M_contig1171:233280..233357 | 1680866579.1464486-CDS-A-nodosum_M_contig1171:233280..233357 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1171 233281..233357 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1171.63.1 >prot_A-nodosum_M_contig1171.63.1 ID=prot_A-nodosum_M_contig1171.63.1|Name=mRNA_A-nodosum_M_contig1171.63.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=130bp
HHHHNEKEPTLSMAMANGCGGMTQHLPLEEDQGQGQELEHEASSSSEVMQ
FKFGLAQLSPASACMTSAGACPASATATIAASASATLEDNVKAENDSETG
GCPSGPSIARLLSVSSVNAESSSIARLLSV back to topmRNA from alignment at A-nodosum_M_contig1171:224895..233359+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig1171.63.1 ID=mRNA_A-nodosum_M_contig1171.63.1|Name=mRNA_A-nodosum_M_contig1171.63.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=8465bp|location=Sequence derived from alignment at A-nodosum_M_contig1171:224895..233359+ (Ascophyllum nodosum dioecious)
CACCACCACCATAACGAAAAAGAACCAACACTCTCCATGGCGATGGCTAA
TGGCTGCGGCGGGATGACGCAACACCTGCCGCTCGAAGAGGATCAGGGAC
AGGGACAAGAACTGGAACATGAGGTACTGAGCTATTTTTTATGGATGTTC
CAGTACATTTAGTGAAGAAACAAAGCGTCTCGACATTAATTCTAGTACAT
ATAGTAAAGTCTCTCAAGCGTTGGGGTGTTGAGCAGCAGACCCGCGCATC
GAGACGAAGGCGGCGGGGCTGTGACCTCATGTTTTCTCCCCGACAGTCTC
TCGAGACAAGGGCTGTGCTGTGCTCTATTCCGTCAAAGGATCACAAGATG
TTGAGGATGTTTCTCGAGGTTCGACGTTGCTCGCACTTGTACTAAAATAA
AAACACGTCACCCTTATACTCTCATGTCTGGAGATAAATTCGCGATTTTC
TCGGATCACCCAACCCCCGGAGGACGCTTCGAGAGCAGCATGTACTTCCT
CCTTTGATAGAAAATCAACTCTTGGCCAGTTCCCTGATGCCCCGAAGAGC
CTATAATATAATATAATACGGTACTAATATTAGATTAAGATAATATTAAT
AATAGGGCCCCATTCTCGGCCGCACTCTGCGGACATATTATTTTCGCTAC
GGCTGTGTAGGTTACATGACATGACATAACACTATAATACATACACTAGA
AAAAAAAAATCAAGGAAAAAAAGAGCATTTGTATATAAGAAGCAAACTTT
CGCCATTTTTAACGCAAGTAACTCAAAAACCTCCATAGGTTTCATGACAT
GACTTTGCTTCTGGTGTGATTTTTTTTTGCATTAGCTTGATGGTGTACCA
TGTCCCGTCAACAACGGTTCTTGTGCTTTGTATAGACTGAAAATACTCTA
GCGAAGAATGGCTACAGATGTGACAGGTGTGTACAATTGACAAGCTGAAG
GGGTGGATCACTGTTTTAGACTGTTGTTTAGCAGTTGCAATGATACAGTA
AATGGACTTACGCAGTGGTGAAATTTCATCTGACATCTGTCATTCTTGAG
AAGAAAATGAAAAGTGCTTTTATGGTACATATACATAACGACGTCATAGG
AAAGGACAACTTTTCGAGAGCGTTATATTGAGATGGAGGGACTTTTGCAT
TCAATCCCAGTCTCGCGTGCTCGTGGTTTTCTCTATTAATAGTATAATAG
TTGGTTTATTGATGATGTACTATTATAATACACAATGACGAGTACTACAG
CAGTACAGTACCTATGTATGTTCCAGTCATGCATGTTTATTGCACAGCAG
TACGGATCTTAAGTGTACTGTAGACTATGTAACTAAGGCGGGGCGAGTTT
TACCCTTGGTTCCTTGGACCCTTGGTCTTACACAGCACCGGCGCCGGCGA
TGCAGCATTTCTTGTCTAGTCTACCAAACCGAGCGCACTCGCACAGGGCT
CCGGACATAACATAACATCGAGAAAGTTTCGTGAGCCTCCAATCCGTCAA
ATCCTAGCGCTCCTTGCACGCATGCAGCTACACATCCTTTTTTGCGCACG
CGAATTCCTCTCCCATCAGCTCTTGTAGATATTTTACTATTTACTAGTCA
TGATCTCCCGGGAAAATAGAAACGGTACACGGAAGCATCTGCAAAATAGC
TGATGAGCAGACTGACGCGGGACGGGACTGCCGAACCCGTCTCGCGAGAC
CAAATTCTCAGGCGCGAACGCGGACAGGGAAATATTCATTTTACCTGTTC
AGCTGACCACGAGCAGGATTGGCAACCTTACCCGGTTGATCCATACTCGT
GCTATATGTGTGACCATATATATACTGTGCTTCGACCTTACAATCTTTTC
GCTATAATACCGTTGAGTGAATCAATCCACCGGCGCATCCTATTAATAGC
AACAAATAGTGTTAGTATTAATAGTATAATAGCTGCTTCCCCTTCCTCAA
GCCGGTCGACCCCGGTAGCTCAGTTGGCACCTCGTAACCTTCTGACACGT
TGGGACGTGAGTTCGATCCCGGCAAACGGGATTTTTCTCACTAAACACTA
AAAAACCAAAATAAAAATGCCCACCGGGTGGAGAACGATTAATTCGTTAG
TACACAAAATTCGACTTCACGGTCGACGAGGGAAAGGAATGGCTGAATCC
TTCTCGCGAGAAAAATCAAGGCACGCACCGCAGAATTAAGGTGGATTAAA
AATCCTGTGTGACCTTCCTCCTGTGTGACCCCGGCTGGTACGTCCAACGA
ACTTGATGTCCAGAATGAATGGGAAGAAAACACAACAACACACACACACT
TCCTCAACTCAACGTTTTTACTTTACTCTAGTCATGATGAGCGTTCTTTG
CCGGTGATTGCCATCGTACCCACGATCCACCAGTGTACCAGGGGCCTGTT
ATGAAGTGGGTTTTCAGGATGCTTTACTTTAACCTGGCTGTTGCTATTAT
TACAAGTGCCTCCAAACGGAACGTTGTTGTTGACAAGAAAACTGTCGCTG
GCCGATGAAAATTTCCGTAAAGTTTTCATCGGCGGAGGAGAGCTTACCTG
TCGATATAGTGTGATGATCTCCCTGGTTAAGTTCTTATACCAGGGACCTT
ATAAAGTGGCAAAACAATATTTTCCGGAAAATCGATGATCAGTGGAAAAT
TATCCATGCATACCGTAATCATGCGGGCCAGCGCACCGGGGTGCGATCGT
TTTTTAAATCATACCGTTCTTGCTTTGTTTTCGCACCCCGGTGCGATAAC
GCCGATGGGTGCAATAACGCCGATACCGGTGCGGAAACACAATTAAATCA
TTTCGTTCTGTCTTTTTCCGCACCCCCGGTGCGATAACCCCGATGGGTCG
ATTTTGTCTTCTTCAGCGAGCACGATAGTTACAGATGGGCTTCTTCTGCA
ATCGGCCGGTTGTAGGGCGGGATGTGTGTTGTGTGCTTGGTGGAGTGCAT
CCATTGTACCAATTACCGTAAAGAAAACAACTTGACTCATTTCTACGCGT
GCACCTCGACGGTGTAAACACACACAAAAAAAGGAGTGGGCGCCCTGATG
ATACTCTTACAGCCGTATGTAGTACGGCAATTTTACCTACTGCAAATACC
CGTCACAGTAGTTCAAGACTTGGCCCGGAGCCACTACCGTACTTGCGGGG
CACGCAACAAACCCCGAAGCGGAATGTTATATCGGCGTTATCGCACCGGG
GTGCGATAACGCCGATACCGGTGCGAAAATACAATAAAATCATACCGTTC
TTGCTTTTTTTCGCACCCTGGTGCGATGACGCCGATGGGTGCGCTGGTCC
GCATGATTACGGTAACTTGTAACAATCAGTCTTTCGCCATGGAGAAATTG
TAATATTGCCACTTGGTAAAACCCCTGGAGTGAGAGTTTCACGCAGCGAC
GACCAGAGTAAATATGTGGAGGAAGGGGAAGCAGCTATTAATAGTATTTG
TTGCTAGGATGCGCTGGTGAGTCCTAACGATGGTAACGGAAAGGCTACTG
TGAGCTTGAAGCACTCCGAGTCCAGCACCGACAGAGGGCACTTCGCCCCC
CCCCCCAAGTACAAAAATATATCGGTTACAGTATAGTGCAGTACACTGCA
TTACACTACGTTACAGTACAATGAACTATCCATTGGCGCGTAGGCAGTCA
GTTTATAAGACACTCAAAAGATTGGACCCATTGCCACGCGAAGAGAAGTG
AAGCTGTTTTGCAGACGCTTCCGTTTACCGTTTCTATTTTCCCTGTAGAT
CATAACAAGTCAGCTGATTGGAGCGAAATTCGTTCGCACAAAATTATGTA
GCTGTATCTGTGTAACGAGCCCGGATTTGACGGATTGGAGACTCACAAAA
ACTTTCTCGATGCTATGATATGTCGGAAGCACTGTGCGAGTGCACTCGGT
TTGGTAGATTAGTAATATGCTTTAACGCCGGCGTCGCTGCTGTGTGCGAG
CAAGAGTCCAACTCGCTCTTCCTTAATTTAATACGCTTACGATTGGTACT
GCTGTATCTATACACCAATACATGAAAATAAGCTACATAAACTATTAACA
TCATAACTCATTATTAGAGACGAAACAACTTTAAACAACCACGAGCACGC
GAGGTTGAGACTGAATACAAAAAGCCCTCCATCTCAATATAAATCCCTTA
CGAAATTGTCATTTGTTTTCTATGCCGGCACGCATTTATGACCGACTCTG
CTTTATTGGTACACAAATCAAAAATAAAATCCTCGGAAACAGTCATATTC
GTTAAGACAATTTCACGACATTTTCTTATGACACCCAAAAATGACAGATG
ACGCTTTCCGAGGACATGGTTTTAGAGACGCGATAATCAATGTAAGGATA
ATGTAACGCGCGATGAGAGCGAGCCCTCGGAAAGTTTTCGAGCGATCGCA
TTCTCCTTACATTATCGTTTTTATAGTGATAAGGGAGGCCTTTGCCCGGC
ACAGCCCTTTGAGAATCACATCTATTAATATATGAATACGTACAAATACG
CGTGCGGCGTGTGACGTTACTAAGACGTGCTCCTGAGGCCTCCTGAGGCC
TTGCGCGTGGAGAGAAGAGGTTGCTTTGCGTTCCGCGGTCACCGCGCCAT
GGTTCCGAGCGACGATGGGACCGCCAAGATGTCATATAAGGGTGAGCATC
GCGAGTGTTGACGAAGACAGCTTGTGTGACGTTTAGACTGCGCCGCCGCG
TGAGGGCTATGCCGGAATGGGCTATATTCCTGGAGATGATGCATTTGACG
AGAAGGGCAACGGATGATACAGTAAGCCCTCAAGGCGCAGTTGGAGGGGC
TTTGACCGCCCGGACTATGCCGAGTTTAGCATTGGAAGTAATCATCGCGG
ATGTAAAATGTAAAACTGGTTGATCGGAACTGTCTCGGTTTGCCCGACGT
GATGTTATGGGAGACTCTTTCGCGGTCTACATCACTCTCTAGAGCTCGTG
TAGGGCTAGCTTGTCAGGCAGAGAAAGTGGCTTCCGACTGGAGATAGAGA
TCGAAGATGGCGATATTGCGGGCGGGTGATGCATCCCTGTGACTGTTATA
TACAGTGGGCAAAGAGGACGGGCGATTTTTTTCTGATGGATCACGAGACT
GTTGTGTACTGTTAGCACTCGTGAAACAAACAGGAACTTGTTCTACTCTG
TATGTTTTTTCCCACAGCAGTGTACACATCAGTGTACAGCAGCAACGGTA
GACAAATGTTGATAGCTGAGCATGTACTTCTCCGATTCCACCAAAATTTT
ATTGTCGTTCCCCGGGGTTCCCGCCACCAACGACGGTAGAAGAGAAGTAT
GCAGTATAGTATAGCCATGTGTAATGCTGGAACACCGCTGTGAGCTTTCG
TCCAAAGTTTCGTGTTGGAATGCGGCGAATTTCCGACCTACCGGTATGAA
TAAAAATATTATTATAAGATCGGACTCCTCAATGTGTTTTATTGTTGCGA
GGCTTTATTCGCCCGTTTTTGGAGAATTCCATTTTTATTGTTGTGCCCAT
AAGTCAAAGGGCTGATTTTTTATGGGCTAGGGAATCGGAAATGAAATTCC
AGGTGATTTTATGGCTCCAGGAAATCGCGATTTTATGGCGAGGCATTCCG
TCCCTGCCTTGCGTTGCCATTAATACCCCCCAAAGGTCCCAGAGTATTAC
TGTACCCATCCCATCCCATACCATCCCTCCCAGCCCTGGTGGAGAAAGAA
AAGCAGTTTTCGTCAAGCCAAGTTGTTTATATTTACTGTATAGCGGAAAG
GAAAGGAAAGGAAAAGAAAGCAGGAAGGAGGAGGAGAGGAGAGGAGAGGA
GAGGAGAGGAACCCGTGAGTAAGCACCAAGTGGGCTGACGCGGGACGGGA
CGGCCGAACCTGTTGTCTCGCGAGAGATGAATTCTCAGGCGCGAACGAGG
ACAAGGGGAAACGTATTTTTTCCTGTTCAGCTGACCACGAGCAGGGTTAA
TAGCCATATACCGTTTGATGCCCGATCTGCTATATGTGATGACCATACAC
AATACATACACATCATGTCCGGTTGTTACCCTTGCTGTATCTACATATAA
TTTGTAGAACTACTGCTGCTGTAGCTGTAGCTGTACACTATTAGTAGTAC
TTCTGGGTTTCTTACTTTTGACTGCTCATTAAGCCTCGAAGCTATTATGA
AGAAAGCTTGGAAAAATTCGATTCCCATATTTTTTTCCTGCGAAGCGTTC
GCTCATTTCCTGGAATTTTATTTCCGATTTCCTAGCCTATAAAAGTCAAA
GAATTGGTCAAAGGGTCGGTCTTTTTTCGCAACCGTTCCACTTTTCCTAA
AAACAAGCCTGTGGAAACCCCTTCCAACTTTGGTCAGCACTTGTCTTTTG
GAAACTGGAAAAATGTAAAGTACGCCTCCTCTGAGGTCCAACCCCCACAG
TCCCATGCTCGCAATTTATTGGGGTAGTTCCTCGGGGGAAGATCAAGTCA
CAGCCAGCTACACCCATGCCGCGGGCTAAAACTTGGTGAAACCCATCTAA
GATATAGATAAGAGCCCGTTGGACGCCGAGCCTTCATCTAATAGCTGAGG
TCTAGATCAGCTAATTAAATGATGGGTGGTGACCGTGACGGCACGGAATA
ACTGTCGTAAAAACGAGCGCTTGTAATTTTCCGACTTTCGAAGATGTTCA
GAAATGTACTTTATATATATTTATATACTTCGGAGTAATATTTTTTTTCG
AACTGTGAAACATTTCCAAATGAAAATTGGAAAATGGGAAGAATGTTTTT
CAAGGCTGGCCCTCAACAGCTTAAGCACTTGTGTCGCACATGCCCACTCC
GTACATATACTAGTATATTATAGTATAGTGAGTGTGGGAAAAGAGGGGCG
CACGTTAATTGGTCCATTGTGACGCCTGAAAAAGTGGCACCCGTTACTGG
AACTACCTTGAGGACTACTGGCCCTGTGTCGGCGGACGCTTGGTGGCGAA
CGCCATCGGTACGCAATTGTGGGACCCGATAAACTCGGGGCGAGGAGGAA
GCCGTATTTAAGCACCAGATTCAGCCTGGCTGTGGAGAAAGAACGGGCTG
ACGCGTGAAGGGACGGCCGAACCCGTCTCGCGAGATTAATTTCTTAGGCA
CGAACGCAGATTGAGGAAAAATCATTTTCCCTGTCACAGCTGACCTCTAG
CAGGATTGGCAACCACACCGGTTGATGCCCAATCTGCTATATGATGTATG
GTAACACATATAACAAGAGTATGGATCAACCGGGTAAGGTTGCCAACCCT
GCACGTGGTCAGCTGAACAAGAAAAATGAATATTTCCCTGTCCGCGTTTG
CACCTGAGAATTTGGTCTCGCGAGACGGGTTCGGCAGTCCCGTCCCACGT
CAGCCTGCTCATCTCCATACTCAGGCTGAATCTGATGCTTACTTACGGAT
TCCTCCCGAGTTCCGCGGCGGCGTCCATTTATGAAACCGCCATACGCCAT
CGGGTCAGTCCGGAGTTTATCGGGTCACGCAATTGCGTACCGATGGCGTT
CACTGCCGAGAGTCCGCCGGCACAGGGCCAGCAAACCTCAAGGTAGTTCC
GAACGAGTGCTGCCTTGGCAGGTCATCATGGACCATTTAACATGCGCCTC
TCTTTCCCACACCCACTATTGGTATGAAGTGGGCATGTTGAAAGTACTGG
CTGTTGCTTGATGACGATTCAGACAGCTGAATCTGATATCCATTTGTTGA
TGTACTAAACTGTGCCACAACTTTTATGTGTTTTACCAGGTACAGTAACA
CAGGTTTACAGTAAATGTATTTATTATGTCTCGTTCTCTCTCGTTCGTTT
TCAGGCGTCATCAAGCTCTGAGGTTATGCAGTTCAAGTTCGGCTTGGCGC
AGCTCTCACCTGCAAGTGCTTGTATGACTTCTGCCGGAGCTTGCCCTGCT
TCTGCTACGGCCACCATCGCGGCCTCAGCCTCGGCGACATTGGAGGACAA
CGTCAAGGCGGAGAACGACTCGGAGACCGGCGGATGCCCAAGCGGTAATG
GGTACTTTTGAAAGACTAGACTACAGTATCAACAATACGATCAATATTAT
AGTTGCGCCCTCGATACAACTGGACAATCAATCAACACACTGGAGCACCG
TCATCGTAGCGCAGAATCAATCAACACTACTTTACTATAATATAGTACTG
TGTGAGGACTGCTGTAAATAGTACTGCTGACGGCATTGACAGATGACAGA
TATTTTCTACACTGTTCACTGATCTGTCTATCTACAATGCCCAATACAGT
ATAACGTATCAAGTGACTGAACGTGTCAGTTTTTTCTTGCCACCCATACA
GCTCGCCGTGAAAAACTTGATGTGAAATTCTGACATTTTGAGCCCTGGCG
CCCCCCTCCGCCACCCTTCGTACCCTACACGGGCAGGCCCATCCATTGCG
CGATTGCTCTCCGTCAGCAGCGTCAACGCAGAATCCTCGTCCATCGCGCG
ATTGCTCTCCGTCAG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig1171:224895..233359+ >mRNA_A-nodosum_M_contig1171.63.1 ID=mRNA_A-nodosum_M_contig1171.63.1|Name=mRNA_A-nodosum_M_contig1171.63.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=390bp|location=Sequence derived from alignment at A-nodosum_M_contig1171:224895..233359+ (Ascophyllum nodosum dioecious)
CACCACCACCATAACGAAAAAGAACCAACACTCTCCATGGCGATGGCTAA
TGGCTGCGGCGGGATGACGCAACACCTGCCGCTCGAAGAGGATCAGGGAC
AGGGACAAGAACTGGAACATGAGGCGTCATCAAGCTCTGAGGTTATGCAG
TTCAAGTTCGGCTTGGCGCAGCTCTCACCTGCAAGTGCTTGTATGACTTC
TGCCGGAGCTTGCCCTGCTTCTGCTACGGCCACCATCGCGGCCTCAGCCT
CGGCGACATTGGAGGACAACGTCAAGGCGGAGAACGACTCGGAGACCGGC
GGATGCCCAAGCGGCCCATCCATTGCGCGATTGCTCTCCGTCAGCAGCGT
CAACGCAGAATCCTCGTCCATCGCGCGATTGCTCTCCGTC back to top
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