mRNA_A-nodosum_M_contig1171.50.24 (mRNA) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1171.50.24 vs. uniprot
Match: A0A6H5K536_9PHAE (BTB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K536_9PHAE) HSP 1 Score: 1126 bits (2913), Expect = 0.000e+0 Identity = 837/1841 (45.46%), Postives = 1016/1841 (55.19%), Query Frame = 1
Query: 1 MQRWKTDVICAGKYRPRQFEYHPSHEDVVVFGTVKGELAVVVDLAKSHVRSSISSGLSKDKHDSILGLCWLKRSPNRFVVGSSHGCLRLCDMGAKVPPSVSGVPAAPAAE-GDWKFQRRYGDLSNRWNAVKEVSPESSSKRSVARGGAVDLGVAE---VEPRIVTEFSRFDRLTSVHVNSTDDHMLVSGYTYGVTLFDISTGKVVRQFENIHEDHINISRFANHSPFVFATSSFDCTVKAWDSRMPAEKTPIYTCESEMGHVMLSFSPDDVFLLTSAVDNEVKQYLAVDGSLHMDLDLPRTGLDENFTRSYYTSSGRMILSGSSEEQMVRLHCAQTGRMIHEAEMYPGRKHGSLYVQSLRGDPHHDFRFSVLVNYRDPAYPLEIINIDMLQDNDGEDLSSHMVSASSARLSSDLGRACCEKAGADVYLVARNRLRFAAHKAFVSCRCRVLATLIEEADAVAVAAGEDSGDDGAGELAKEKGVRHFFSPGEGGCSDCFVGVNAHPVFVLAGFISAGASDETAMVLKEQQQKPSLTIDDGLGDSRRGEDQAMIE--VCLPLAVAPEIIPVVLEYIYTDRLEPEAANGDSGYAEAYCDPGTGDGTGKERGQRGSSSWGGGAAD------------------GCVPVTR-----RAGLLIEEDFLTSRTLEGTVVR-----YGKLLEAAKGLGLERLSSLVEWRCVRLVDTVRVVDVAKMALRFERQQLLQYCVHFLVAHLGAVYVLHGKACLPSELQKKVDDERVRRLYALNREADTAAMPTPTS--RAPRSAAAVPATHQHEPATGTDNNAGAGNNN-----NDAQGHNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVQNGQHGHVHHDAMDEDDQAEXXXXXXXXXXXXXXXDDEMGDEDNIVDEEVESTATSDEDEDSAAEEGY----------EDEGPWMDPSQCVGGNLPWAVRRRLVPTATGHSGTAVLGSQMVVIGGANRRQVHSCRHVLMYDTTERTWSKMLTRGNAPPGLIHHSCTVLEPSWALQRNLLILGGPRHSVNVQR-PKAPVAVLDCLTMEWSKPKVSGEFMADRTRHTAVAVCSD-EDLPNRVLSNSRGGAGRCGGAPGGRSKGPSAEAAGAFAASSR-------GKRNHFGTSGTAGA----SDVRDYGGDTNVIVFGGYDPAQQVVFNDLAVLNVMRLPPGMSASAVAARRDHLSRRQRHSFTHAHSAGRE-GRGEQQGAADPECGSDSEDDDGSPSRRKDRESCLQDDDCGGMRACTR------------------------------SSHAYRYHWTWPMVLGTPPTPRLAHAATVVRVTNREDGEGRGMRNQ-----AYMVVFGGIGEGAVFNDVNVLKCSG---LEWMTVHVHGRRPARRYGHAMVALSGASGSFENYAKLAVFGGTSGHNSFNDLFLLTVTPGAGANGIPRVKAEWEHLARNTVGILPSARSRQAMCLINGELIIFGGSDETQTTQSTDPFNREGDSLVYHLRPRMIRMPLPRSQAGSVASSSAVQLAASAAAVASGAAAPRRHGARAVQAXXXXXXXXXXXXXXXXXXXXLAHERAMAREVAARMTLVQAVETRRTXXXXXXXXXXXXXTTSLEARA---SALITG----GLQ---HLEDGGSDGLARSGVVTGAARRADEVHGSHGHGESAAGFAEFQRSIAAAAT-RRTHQPRL--LRQKHPA--EWSEAGPRAVQ-----IVWESVRPQVFVYDAGPEPAVVVPPVALHRDMSSLIGSKSFSDVRFRFQAVDHALPTTPTSTAHYAIVSP-----PDLSP 5139
MQ WKT V+CAG+YRPRQFEYHP E+VVVFGT++GE A+V D+A + V SSISSGLSKDKHDSILGLCW+KRSP+RF+VGSS+G LRLCD GA PSV A+ AAE + Q +GDL++R NAV+E P + G +G+ + RIVTEF++F++LTSVH+NSTDD ML SGYTYGV LFD+ TG+VVR FE++HEDHINISRFANHSPFVFATSSFD TVKAWDSR+ A+ PIYTC SEMGHVMLSFSPDDVFLLTSAVDNEVKQYLA+DG LHMDLD+P+TGLDENFTRSYYTSSGR+ILSGSSEEQ VRL+CAQTGR+IH AEMYPGRKHGSLYVQSLRGDPHHDF+FSVLVNYRD AYPLEI+N+DMLQ GEDLSS M ASS+RLS+DL RAC +K GAD++LVAR+R RF AHKA V+CR VL L+ +A +R EG +DC N G S R + A+ VCLP AV+P+I+PV+L Y+YTDRLE N G A+ Y DPG G S GGGA++ GC T R G+ + EG + R Y K+LEAA LGL RL SLVEW C +LV+T V+ VA +ALR +QLL YC+HFL HL V LHG+ CLP +Q KVD++R RR+YAL+ + + A P S A VP+ P AGAG++ N A GG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + +A + D+ D D +DEEV+ + EG WMDP GG LP VR+R+VPT TGH+ TAVLGS+M+V+GG N RQ HSCRHVL+YD ERTWSK+ TRGNAP LI+HS T LEP W RNLL+ GG + N+ + V+VLDCLTMEW +PKV G+ + RTRHTAVAV +D E +RV N P + + E G A GKR S G + RD+GGDTN+I+FGG+ P FND+ V+NV R T AH +GR G G+ GA GS + Y Y W +P+V GTPP RLAH+A VVR+ E G AYMVVFGG+G G++FNDV+ L+CS LEW V V GRRPARRYGH+MV L+ SG+ YAKL +FGGTSGH++FND+FLL ++ G +G + A+WE LA G+LPS RSRQ +C +NGELIIFGGS+ET+TT + P +RE D++V+H+RPR+ + L SQ G A A LA+S +ERAMA+EV LV+A XXXXXXXXXXXXX + L TG G++ E D G GAA G+ GF S+A RR Q R L Q P+ EW P +V+ +VWE +RP FVY+ GPEP VVV P+ LH+DM +LI + FSD++FRFQAVD ALPTTPT+TAHYAIV P P +SP
Sbjct: 1 MQPWKTKVVCAGRYRPRQFEYHPLQENVVVFGTLRGE-AIVADVASNTVCSSISSGLSKDKHDSILGLCWMKRSPSRFIVGSSYGYLRLCDAGAM--PSVGTRNASEAAERAEELLQDHHGDLTSRSNAVQEAMPFGGMGGAENGPGNGPIGLDHRFSEDGRIVTEFAQFEKLTSVHINSTDDQMLASGYTYGVKLFDLGTGQVVRDFEDVHEDHINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTCHSEMGHVMLSFSPDDVFLLTSAVDNEVKQYLALDGRLHMDLDVPKTGLDENFTRSYYTSSGRLILSGSSEEQTVRLYCAQTGRLIHSAEMYPGRKHGSLYVQSLRGDPHHDFQFSVLVNYRDTAYPLEIVNVDMLQGTGGEDLSSLMAYASSSRLSADLRRACVDKQGADLFLVARDRSRFPAHKAVVACRSAVLGGLLAKAXXXXXXXXXXXXXXXG-----SASLRLTIRSEEG--NDC----NGK------GSDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXEREDPEAAVTTTCVCLPRAVSPDIVPVILAYLYTDRLEAYPDNLRDGCAKEYVDPG------------GGCSSGGGASEPEVXXXXXXXXXXAEAVGGCRSSTPMEGGDREGVGLGGGGERGSCGEGAMTRNKVALYEKVLEAAGALGLHRLRSLVEWECRQLVNTTTVLLVASVALRQGTEQLLSYCLHFLGTHLHPVLELHGEGCLPPSIQAKVDEQRRRRVYALHGDPNPIAAPIAPSWMTATTDTMTVPS-----PPLNPSGQAGAGSSTGAVLRNSAGAGQGGAAAGATNGPQNAFHGLDPTEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEG--------EAAEGDE-----------------------DYDGFIDEEVDVXXXXXXXXXXXXXXXXXXXXXXXXXGDYEGGWMDPYHG-GGKLPAIVRKRIVPTVTGHTATAVLGSRMMVLGGGNIRQFHSCRHVLVYDPIERTWSKLDTRGNAPSALIYHSTTALEPPWGAPRNLLVCGGNTNPRNINAISQTQVSVLDCLTMEWHRPKVEGDPIGVRTRHTAVAVHADYEHHRDRVNVNMS--------QP---DELAAEEEEGLLDADDYLLEGKGCGKRREIPGSPAEGGGRSPTPPRDFGGDTNIIIFGGFSPIAGHAFNDVVVVNVHR-----------------------PSTTAHPSGRSTGGGDTAGALPSFHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNDGTGRNGYTYRWVYPVVRGTPPVGRLAHSAAVVRLVEGEGGXXXXXXXXXXXXXAYMVVFGGVGTGSLFNDVHCLRCSSGRTLEWEKVFVRGRRPARRYGHSMVPLTAPSGTC-GYAKLVLFGGTSGHHAFNDMFLLNLSWGT-VDGQHGILAKWESLATQITGVLPSPRSRQTVCQLNGELIIFGGSNETRTTINGQPASREVDAVVFHVRPRLRKKLLAPSQ-GYGAEGGAAGLASS----------------------------LKGSPPNDDRAVSWWYERAMAKEVYNNAGLVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXDPPAELFTGPPPSGVRLPMRAETPWRDTSRGWGGGAGAA-----AGGAPATAFGTFGFLGAAASVARGGRLRRPQQQRGGGLSQPPPSLQEWPGEAPTSVRPYRVKVVWECIRPDTFVYEPGPEPPVVVRPMTLHKDMQTLIDNDRFSDIKFRFQAVDFALPTTPTNTAHYAIVPPXXXXXPGISP 1702
BLAST of mRNA_A-nodosum_M_contig1171.50.24 vs. uniprot
Match: D8LNK7_ECTSI (BTB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK7_ECTSI) HSP 1 Score: 853 bits (2205), Expect = 4.670e-283 Identity = 553/1114 (49.64%), Postives = 652/1114 (58.53%), Query Frame = 1
Query: 1 MQRWKTDVICAGKYRPRQFEYHPSHEDVVVFGTVKGELAVVVDLAKSHVRSSISSGLSKDKHDSILGLCWLKRSPNRFVVGSSHGCLRLCDMGAKVPPSVSGVPAAPAAE-GDWKFQRRYGDLSNRWNAVKEVSPESSSKRSVARGGAV--DLGVAEVEP---------------RIVTEFSRFDRLTSVHVNSTDDHMLVSGYTYGVTLFDISTGKVVRQFENIHEDHINISRFANHSPFVFATSSFDCTVKAWDSRMPAEKTPIYTCESEMGHVMLSFSPDDVFLLTSAVDNEVKQYLAVDGSLHMDLDLPRTGLDENFTRSYYTSSGRMILSGSSEEQMVRLHCAQTGRMIHEAEMYPGRKHGSLYVQSLRGDPHHDFRFSVLVNYRDPAYPLEIINIDMLQDNDGEDLSSHMVSASSARLSSDLGRACCEKAGADVYLVARNRLRFAAHKAFVSCRCRVLATLIEEADAVAVAAGEDSGDDGAGELAKEKGVRHFFSPGEGGCSDCFVGVNAHPVFVLAGFISAGASDETAMVLKEQQQKPSLTIDDGLGDSRRGEDQAMIE--VCLPLAVAPEIIPVVLEYIYTDRLEPEAANGDSGYAEAYCDPGTGDGTGKERGQRGSSSWGGGAAD------------------GCVPVTRRAGLLIEEDFL----------TSRTLEGTVVRYGKLLEAAKGLGLERLSSLVEWRCVRLVDTVRVVDVAKMALRFERQQLLQYCVHFLVAHLGAVYVLHGKACLPSELQKKVDDERVRRLYALNREADTAAMPTPTS--RAPRSAAAVPATHQHEPATGTDNNAGAGNN------NNDAQGHNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVQNGQHGHVHH-DAMDEDDQAEXXXXXXXXXXXXXXXDDEMGDEDNIVDEEVESTATSDEDEDSAAEEGYEDEGPWMDPSQCVGGNLPWAVRRRLVPTATGHSGTAVLGSQMVVIGGANRRQVHSCRHVLMYDTTERTWSKMLTRGNAPPGLIHHSCTVLEPSWALQRNLLILGGPRHSVNVQRPKAPVAVLDCLTMEWSKPKVSGEFMADRTRHTA 3171
MQ WKT VICAG+YRPRQFEYHP HEDVVVFGT++GE AVV D+A ++V SSISSGLSKDKHDSILGLCW+KRSP+RFVVGSSHGCLRLCD GA PSV A+ AAE + Q +GDL++R NAV+E P S A GG + LG E P RIVTEFS F++LTSVH+NSTDD ML SGYTYGV LFD+STG+VVR F+++HEDHINISRFANHSPFVFATSSFD TVKAWDSR+ A+ PIYTC SEMGHVMLSFSPDDVFLLTSAVDNEVKQYLA+DG LHMDLD+P+TGLDENFTRSYYTSSGR+ILSGSSEEQ VRL+CAQTGR+IH AEMYPGRKHGSLYVQSLRGDPHHDF+FSVLVNYRD AYPLEI+N+DMLQ DGEDLSS M ASS+RLS+DL RAC +K GAD++LVAR+R RF AHKA V+CR VL L+ +A A A S ++G G+ A AG S+ + S T D G R + + VCLP AV+P+I+PV+L Y+YTDRL+ N G AE Y DPG G+ S GGGAA GC T R G + L T V Y K+LEAA LGL RL SLVEW C +LV+T ++ VA +ALR +QLL +C++FL HL V LHG+ CLP +Q KVD++R R+YAL+ + + A+P S A VP+ P AGAG++ N G G A NGQ H D M++ XXXXXXXXXXXXXXX E A E + ++G+ DE TGH+ TAVLGS+M+V+GG N RQ HSCRHVL+YD ERTWSK+ TRGNAP LI+HS T LEP W RNLL+ GG + N + V+VLDCLT E P+ G +A HTA
Sbjct: 1 MQPWKTKVICAGRYRPRQFEYHPLHEDVVVFGTLRGE-AVVADVASNNVCSSISSGLSKDKHDSILGLCWMKRSPSRFVVGSSHGCLRLCDAGAM--PSVGTRKASEAAERAEELLQDHHGDLNSRSNAVQEAMPFGGRAVSRAAGGVLYPSLGGVENGPGNGPIGLDHRFSEEGRIVTEFSLFEKLTSVHINSTDDQMLASGYTYGVKLFDLSTGQVVRDFKDVHEDHINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTCHSEMGHVMLSFSPDDVFLLTSAVDNEVKQYLALDGRLHMDLDVPKTGLDENFTRSYYTSSGRLILSGSSEEQTVRLYCAQTGRLIHSAEMYPGRKHGSLYVQSLRGDPHHDFQFSVLVNYRDTAYPLEIVNVDMLQGTDGEDLSSLMAYASSSRLSADLRRACVDKQGADLFLVARDRSRFLAHKAVVACRSAVLGDLLAKAAAAA------SSEEGKGDAA-------------------------------AGVFSS--------------LEASATKKDAEGGEREDPEAGVTTTCVCLPRAVSPDIVPVILAYLYTDRLQTHPDNLRDGCAEEYVDPG------------GACSSGGGAAGPEVXXXXXXXXXXXETVGGCRSSTPRGGGDRQGVGLGGGGERDSCGEGATTRSKVAFYEKVLEAAGALGLHRLRSLVEWECRQLVNTTTILSVASVALRQGTEQLLSFCLYFLGTHLHPVLELHGEGCLPPSIQAKVDEQRRLRVYALHGDPNPIAVPIAPSWMTATADTMTVPS-----PPLNPSGQAGAGSSTGAVLRNGPGAGQGG--------------------------------------------------AAAGAANGQQDTFHGLDPMEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEAA----EGAEVDDGFIDE------------------------EVTGHTATAVLGSRMMVLGGGNIRQFHSCRHVLVYDPIERTWSKLATRGNAPSALIYHSTTALEPPWGTPRNLLVFGG---NSNPRNTNTDVSVLDCLTREGHPPRGEGAPIAGPPPHTA 962
BLAST of mRNA_A-nodosum_M_contig1171.50.24 vs. uniprot
Match: A0A835ZCY9_9STRA (BTB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCY9_9STRA) HSP 1 Score: 448 bits (1152), Expect = 8.100e-126 Identity = 460/1395 (32.97%), Postives = 574/1395 (41.15%), Query Frame = 1
Query: 472 RIVTEFSRFDRLTSVHVNSTDDHMLVSGYTYGVTLFDISTGKVVRQFENIHEDHINISRFANHSPFVFATSSFDCTVKAWDSRMPAEKTPIYTCESEMGHVMLSFSPDDVFLLTSAVDNEVKQYLAVDGSLHMDLDLPRTGLD--ENFTRSYYTSSGRMILSGSSEEQMVRLHCAQTGRMIHEAEMY-------------PGRKHGSLYVQSLRGDPHHDFRFSVLVNYRDPAYPLEIINIDMLQDNDG------------------EDLSSHMVSASSARLSSDLGRACCEKAGADVYL----VARNRLRFAAHKAFVSCRCRVLATLIEEADAVAVAAGEDSGDDGAGELAKEKGVRHFFSPGEGGCSDCFVGVNAHPVFVLAGFISAGASDETAMVLKEQQQKPSLTIDDGLGDSRRGEDQAMIEVCLPLAVAPEIIPVVLEYIYTDRLEPEAANGDSG-YAEAYCDPGTGDGTGKERGQRGSSSWGGGAADGCVPVTRRA--GLLIEEDFLTSRTLEGTVVRYGKLLEAAKGLGLERLSSLVEWRCVRLVDTVRVVDVAKMALRFERQQLLQYCVHFLVAHLGAVYVLHGKACLPSELQKKVDDERVRRLYALNREADTAAMPTPTSRAPRSAAAVPATHQHEPATGTDNNAGAGNNNNDAQGHNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVQNGQHGHVHHDAMDEDDQAEXXXXXXXXXXXXXXXDDEMGDEDNIVDEEVESTATSDEDEDSAAEEGYEDEGPWMDPSQCVGGNLPWAVRRRLVPTATGHSGTAVLGS------QMVVIGGANRRQVHSCRHVLMYDTTERTWSKMLTRGNAPPGLIHHSCTVLEP---------------------SWALQRNLLILGG-PRHSVNVQRPKAPVAV-----LDCLTMEWSKP-----KVSGEFMAD-----RTRHTAVAVCSDEDLPNRVLSNSRGGAGRCGGAPGGRSKGPSAEAAGAFAASSRGKRNHFGTSGTAGASDVRDYGGDTNVIVFGGYDPAQQVVFNDLAVLNVMRLPPGMSASAVAARRDHLSRRQRHSFTHAHSAGREGRGEQQGAADPECGSDSEDDDGSPSRRKDRESCLQDDDCGGMRACTRSSHAYRYHWTWPMVLGTPPTPRLAHAATVVRVTNREDGEGRGMRNQAYMVVFGGIGEGAVFNDVNVLKCSGL---EWMTVHVHGRRPARRYGHAMVALSGASGSFENYAKLAVFGGTSGHNSFNDLFLLTVTPGAGANGIPR----------------------VKAEWEHLARNTVGILPSARSRQAMCLIN----GE--LIIFGGSDETQTTQSTDPFN--REGDSLVYHL 4308
RIVTEF F++LTSVHVNST D+ML SGY++ V ++D+ TG VVR F IH++HINISRFAN SPF+FATSSFD TVK WD+R+ AE PIYTC S GHVM+ FSPDDVFLLTSAVDNEV QYLAVDG LH+ LD+P L+ ENFTRSYYT+SGR I+SGSSEEQ VRLHCA TGR+ AEMY PGRKH SLYVQSLRGDP D FSVLVNYRDPA+PLEI+ IDM D + S A A L++DL AC + G D L VA + ++AH A ++CR L L++EA A A + V +P V P + L Y+YTD L +G+ G AE + G ER G GG AA G V A GL L++ T ++ LL AA L + RL+SLVEW +LV V A MA QLL YCVH+LV HL V L G+ LP + ++V R R L A P + E A G D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +V+ + G A D D + E D+ D D+++ + E A VP TGH+ TA+L + M+V+GG+NR Q H+CR +L+YD R W+K +G AP LI+H+ T LEP A R+LLI GG P+ S P A LD LTM W+ P V+G +D RTRHT V +R A D GDTN+++F GY PA+Q F+D+ +LN R + Y + W P V G P PRLAHAA + + G+ MVVF G+G GA+F+D +VL C+ L W V + GR PA RYGHAM AL A+ VFGGT+G F D+ +LT+ + + W + G P RSR C++ GE L++FGGS+E T S + R+ D VY L
Sbjct: 19 RIVTEFESFEKLTSVHVNSTSDYMLASGYSHDVAMYDLETGAVVRTFLKIHDNHINISRFANQSPFLFATSSFDKTVKMWDARVRAEHRPIYTCTSSQGHVMVCFSPDDVFLLTSAVDNEVSQYLAVDGRLHLKLDVPSASLNAHENFTRSYYTASGRFIISGSSEEQSVRLHCANTGRLARAAEMYVETSTSTVAARAYPGRKHESLYVQSLRGDPQRDGAFSVLVNYRDPAHPLEIVTIDMGAPCDAGRRAAAPXXXXXXXXXXXXXVHSGQDGACGA-LATDL--ACAWQDGGDELLDACVVAADGATYSAHVAVLACRSPALKELLQEAKAXX--------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVTVRMPDGVHPAVAHAALLYLYTDGL----CSGERGSIAEVIAEACAG----VERCCSGCHDNGGAAAGGAVVDLSAALRGLRAAHPELSAATTT-RLLALDLLLAAAAALRVPRLTSLVEWSAAKLVCNATVAAAAAMAHARGAAQLLAYCVHYLVIHLDPVLKLEGEGALPGAVLQEVAALRASRKRPLT-------------------AVQPLGAEGEAACGAD---------------------------------LRSSLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVREERDGAEAGAADDMDLEMET---------------DDGSDADDVLADLAEGVA---------------------------------------VPATTGHTATAMLSTGAWGFGAMIVLGGSNRVQFHNCRQLLVYDVASRVWTKQTLQGIAPSSLIYHTATPLEPPPPASAQLPPGGGAQGVHCGTGEATPRHLLIYGGSPQGSAASTEEGGPAAAAQLWTLDTLTMRWACPAATRGSVAGGGSSDAAPGVRTRHTMVPFYGSSXXXXXXXXXXXXA-----------------------------ERRPACLVRDAQRQAEHDISGDTNLLLFAGYCPAEQTAFSDVRILNARRXXXXXXXXXXXXXXXXXX-------------------------------------------------------XXXXXXAQEHPVYDFTWVRPHVEGAEPAPRLAHAAAALPLPPSCGGDA--------MVVFAGVGIGALFDDTHVLACADLARPRWEEVALAGRPPAPRYGHAMAALPAR-------AQCVVFGGTNGQTDFADVHVLTLDVASRRRAXXXXXXXXXXXXXXXXXXAPHDQGFTRLTWSKV--RAAGPAPCPRSRHTACMVQTGAQGEASLLVFGGSEEAALTASGARLHGTRDVDVGVYCL 1180
BLAST of mRNA_A-nodosum_M_contig1171.50.24 vs. uniprot
Match: A0A835YWL6_9STRA (Quinon protein alcohol dehydrogenase-like superfamily (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWL6_9STRA) HSP 1 Score: 352 bits (904), Expect = 1.520e-105 Identity = 186/373 (49.87%), Postives = 240/373 (64.34%), Query Frame = 1
Query: 1 MQRWKTDVICAG-KYRPRQFEYHPSHEDVVVFGTVKGELAVVVDLAKSHVRSSISSGLSKDKHDSILGLCWLKRSPNRFVVGSSHGCLRLCDMGAKVPPSVSGVPAAPAAEGDWKFQRRYGDLSNRWNAVKEVSPESSSKRSVARGGAVDLGVAEVEPRIVTEFSRFDRLTSVHVNSTDDHMLVSGYTYGVTLFDISTGKVVRQFENIHEDHINISRFANHSPFVFATSSFDCTVKAWDSRM-----------------PAEKTPIYTCESEMGHVMLSFSPDDVFLLTSAVDNEVKQYLAVDGSLHMDLDLPRTGLD--ENFTRSYYTSSGRMILSGSSEEQMVRLHCAQTGRMIHEAEMYPGRKHGSLYVQ 1059
MQ +++C G KY+PRQFE+HP DVVVFGT++GE A++ D + + + S IS+GLS+ + DSILGLCWL+R R+VVGSS G A + S + A S ++E + + +VA G + E +V+ F+ F++LTSVHVN TDD+ML SGY++ V ++D+ TG V R F++IH++HINISRFAN SPF+FATSSFD TVK WD+R+ P + PIYTC S GHVM+ FSPDD FLLTSAVDNEV QYL VDG H+ LD+P T + ENFTR+YYT+SGR ILSGSSEE+ VRLHC+ TGR+ H EMYPGRKH SLY+Q
Sbjct: 1 MQNLSINLLCPGHKYKPRQFEFHPDRRDVVVFGTLRGE-AIIADASSNQIISQISTGLSEHRRDSILGLCWLRRHSLRYVVGSSAGASACRHAAAAIRASRPKGCESSTAXXXXXXXXXXHVRSAGLTLLRESACAAGPHLTVAAA----CGASPQEGAVVSSFAPFEKLTSVHVNCTDDYMLASGYSHDVAMYDVETGAVCRAFKDIHKNHINISRFANQSPFLFATSSFDKTVKMWDARVRADHSYVCPVPPACPPPPPQTRPIYTCTSAQGHVMVCFSPDDAFLLTSAVDNEVTQYLTVDGRHHLKLDVPSTAANRAENFTRAYYTASGRFILSGSSEERAVRLHCSATGRLAHAVEMYPGRKHDSLYIQ 368
BLAST of mRNA_A-nodosum_M_contig1171.50.24 vs. uniprot
Match: A0A4D9D8W8_9STRA (BTB domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8W8_9STRA) HSP 1 Score: 339 bits (869), Expect = 4.210e-91 Identity = 194/442 (43.89%), Postives = 253/442 (57.24%), Query Frame = 1
Query: 1 MQRWKTDVICAGK-YRPRQFEYHPSHEDVVVFGTVKGELAVVVDLAKSH----------------------------------VRSSISSGLSKDKHDSILGLCWLKRSPNRFVVGSSHGCLRLCDMGAKVPPSVSGVPAAPAAEGDWKFQRRYGDLSNRWNAVKEVSPESSSKRSVARGGAVDLGVAEVEPRIVTEFSRFDRLTSVHVNSTDDHMLVSGYTYGVTLFDISTGKVVRQFENIHEDHINISRFANHSPFVFATSSFDCTVKAWDSRMPAEKTPIYTCESEMGHVMLSFSPDDVFLLTSAVDNEVKQYLAVDGSLHMDLD-LPRTGLDENFTRSYYTSSGRMILSGSSEEQMVRLHCAQTGRMIHEAEMYPGRKHGSLYVQSLRGDPHHDFRFSVLVNYRDPAYPLEIINIDMLQDNDGEDLSSHMVSASSARL 1218
M W+TDV+C GK + PRQFEY P D +VFGT++GE+ + S + +S + +K +DSILGL WLK+ P++ +VGSS G ++LCD+ + W E E IV + FDRLTS+H N D +LVSGY++ V L+D TG +VR+FE+IH DHINISRFANHSP +FA+SSFD ++K WD R + P+YT SE GHVM+ FSP+DV LL S VDN++ Q AVDG + + L LP+TGL +N+TR+YYT+SG+ ILSGSSEEQ VR+HCAQTG + E YPGR+H SLYVQSLRGDP D RFSVLVNYRD ++PLEII+IDML D+ SH + A+++ L
Sbjct: 1 MNDWRTDVLCEGKGFHPRQFEYSPHVPDRLVFGTIRGEVVICEGSPNSRSAEAWRRKDVETPAGRGMQVRGGDRRRARRIVRQLGNSTETHFAKHDYDSILGLSWLKKHPSKLLVGSSAGVIQLCDIEREA-----------------------------W---------------------------ETENAIVLTYEEFDRLTSLHGNCDDSRVLVSGYSHTVQLYDTQTGAIVRRFESIHSDHINISRFANHSPHLFASSSFDKSIKLWDLRCAGTR-PLYTARSEQGHVMVCFSPEDVHLLASRVDNDIVQLEAVDGRIALHLKGLPKTGLADNYTRAYYTASGQAILSGSSEEQDVRVHCAQTGDALASFEAYPGRRHHSLYVQSLRGDPLCDHRFSVLVNYRDASFPLEIISIDMLGDS-----HSHTLQAATSAL 380
BLAST of mRNA_A-nodosum_M_contig1171.50.24 vs. uniprot
Match: A0A7S1CMT7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMT7_9STRA) HSP 1 Score: 320 bits (819), Expect = 1.500e-87 Identity = 188/427 (44.03%), Postives = 254/427 (59.48%), Query Frame = 1
Query: 478 VTEFSRFDRLTSVHVNSTDDHMLVSGYTYGVTLFDISTGKVVRQFENIHEDHINISRFANHSPFVFATSSFDCTVKAWDSRMPAEKTPIYTCESEMGHVMLSFSPDDVFLLTSAVDNEVKQYLAVDGSLHMDLDLPRTGLDENFTRSYYTSSGRMILSGSSEEQMVRLHCAQTGRMIHEAEMYPGRKHGSLYVQSLRGDPHHDFRFSVLVNYRDPAYPLEIINIDMLQDNDGEDLSSHMVSASSARLSSDLGRACCEKAGADVYLVARNR----LRFAAHKAFVSCRCRVLATLIEEADAVAVAAGE----------DSGDDGAGELAKEKGVRHFFSPGEGGCSDCFVGVNAHPVFVLAGFISAGASDETAMVLKEQQQKPSLTIDDGLGDSRRGEDQAMIEVCLPLAVAPEIIPVVLEYIYTDRL 1716
VT F+ FD LTSVHVNS+D ++L SGY+ V L+D+ TGK+ R F IH DHINI+RFA+HSP +FATSSFD T+K WD RM ++ P YTC S+ G+V+L FSPDD++LLTSAVDNE++QY DG LH+ LD+ +TG +N+TRSYY + G +I+SGSSEE+++RLHCA TG ++H A++YPGRK LY+QSLRG+PH D F+VL NYRD A+PLEI+ I + D +G DL++ + R L A +++ AD+ LVAR + +R AH++ ++ RC V L+ ADAV + GE D+ G E+ V S G GG + A P + G AG + T D LG E + P + + VL YIYTD L
Sbjct: 26 VTTFAEFDELTSVHVNSSDQYLLASGYSSSVRLYDLGTGKLARVFSEIHTDHINITRFAHHSPNLFATSSFDRTIKVWDLRM-RDRKPNYTCRSDRGNVILCFSPDDLYLLTSAVDNEIRQYTVQDGRLHLHLDVVKTGRSDNYTRSYYMNGGDVIVSGSSEEKVLRLHCAHTGELLHSADLYPGRKSPLLYIQSLRGNPHRDHEFAVLCNYRDSAFPLEIVKISQVVDAEGNDLTALTSRPGTQRWYDQLVPAVQDESSADMSLVAREKDGTMVRIPAHRSILAARCDVFRRLLR-ADAVGRSIGEVLRAGGADLDDAPPPGLDGRGGER-VDGMGSAGSGGTASS--SARAAPAVLEPGVSGAGEAGGTG--------------DGALGTPYDLERHPHLLFRCPDSFTAPMARAVLHYIYTDTL 433
BLAST of mRNA_A-nodosum_M_contig1171.50.24 vs. uniprot
Match: A0A4D8Y5A5_SALSN (Uncharacterized protein n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D8Y5A5_SALSN) HSP 1 Score: 283 bits (724), Expect = 1.460e-80 Identity = 155/384 (40.36%), Postives = 220/384 (57.29%), Query Frame = 1
Query: 40 YRPRQFEYHPSHEDVVVFGTVKGELAVVVDLAKSHVRSSISSGLSKDKHDSILGLCWLKRSPNRFVVGSSHGCLRLCDMGAKVPPSVSGVPAAPAAEGDWKFQRRYGDLSNRWNAVKEVSPESSSKRSVARGGAVDLGVAEVEPRIVTEFSRFDRLTSVHVNSTDDHMLVSGYTYGVTLFDISTGKVVRQFENIHEDHINISRFANHSPFVFATSSFDCTVKAWDSRMPAEKTPIYTCESEMGHVMLSFSPDDVFLLTSAVDNEVKQYLAVDGSLHMDLDLPRTGLDENFTRSYYTSSGRMILSGSSEEQMVRLHCAQTGRMIHEAEMYPGRKHGSLYVQSLRGDPHHDFRFSVLVNYRDPAYPLEIINIDMLQDNDGEDLSSH 1191
+RPRQFEYHP+ ++VFGT+ GE+ V+ ++ V S G +S+LGLCWLK+ P++ + GS +G LRL D+ + P +S S RG + F FD+LTSVHVNSTD+ L SGY+ V L+DIS+GK ++ F ++H++HIN+ +F+NHSP +FATSSFD VK WD R + P YT S G+VM+ FSPDD +LL SAVDNEV+Q LAVDG LH++ + TG +N+TRSYY + ++SGS +E +VR+ CA TGR + + + S++VQSLRGDP DF SVL Y P+ EI+ +++L+ D + +S+
Sbjct: 93 FRPRQFEYHPTDSRLMVFGTLDGEVVVINHESEKIVNYIPSLGAM----NSVLGLCWLKKYPSKLIAGSDNGSLRLYDI--------------------------------------QHMPTTSRGMSQNRGNVI--------------FDEFDQLTSVHVNSTDELFLASGYSKNVALYDISSGKRLQDFADMHQEHINVVKFSNHSPSLFATSSFDQNVKMWDIRQKPNQ-PCYTASSSRGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRLHLNFGIASTGSSQNYTRSYYMNGRDYVISGSCDEHVVRVCCANTGRRLRDVSLEGKGAGSSMFVQSLRGDPFRDFSMSVLAAYIRPSSNSEIVKVNLLESGDSDKSNSY 419
BLAST of mRNA_A-nodosum_M_contig1171.50.24 vs. uniprot
Match: UPI001CB98834 (uncharacterized protein LOC122593544 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB98834) HSP 1 Score: 293 bits (749), Expect = 5.280e-80 Identity = 163/380 (42.89%), Postives = 222/380 (58.42%), Query Frame = 1
Query: 37 KYRPRQFEYHPSHEDVVVFGTVKGELAVVVDLAKSHVRSSISSGLSKDKHDSILGLCWLKRSPNRFVVGSSHGCLRLCDMGAKVPPSVSGVPAAPAAEGDWKFQRRYGDLSNRWNAVKEVSPESSSKRSVARGGAVDLGVAEVEPRIVTEFSRFDRLTSVHVNSTDDHMLVSGYTYGVTLFDISTGKVVRQFENIHEDHINISRFANHSPFVFATSSFDCTVKAWDSRMPAEKTPIYTCESEMGHVMLSFSPDDVFLLTSAVDNEVKQYLAVDGSLHMDLDLPRTGLDENFTRSYYTSSGRMILSGSSEEQMVRLHCAQTGRMIHEAEMYPGRKHGSLYVQSLRGDPHHDFRFSVLVNYRDPAYPLEIINIDMLQDNDGE 1176
K+RPRQFEYHP++ +++V GT+ GE+ V+ ++ VR S G +S+LGLCWLK+ P++F+ GS +G L+L D + +P S+ SV R GA F FD+LTSVHVNS D+ L SGY+ V+L+DI TGK ++ F ++H++HIN+ +FANHSP +FATSSFD VK WD R +P YT S G+VM+ FSPDD +LL SAVDNEVKQ LAVDG LH+D +P TG +N+TRSYY + ILSGS +E +VR+ CAQTGR + + + S++VQSLRGDP DF S+L Y P+ EI+ ++ML D +
Sbjct: 445 KFRPRQFEYHPTNSNLMVIGTLDGEVVVINHESEKIVRYIPSHGAM----NSVLGLCWLKKYPSKFIAGSDNGLLKLYD--------IQHIP--------------------------------STHSSVYRSGAS------------ASFDEFDQLTSVHVNSLDELFLASGYSKHVSLYDICTGKRLQVFTDMHQEHINVVKFANHSPSMFATSSFDHDVKMWDLRQNPH-SPCYTSSSGRGNVMVCFSPDDHYLLASAVDNEVKQLLAVDGRLHLDFGIPPTGSSQNYTRSYYMNGRDYILSGSCDEHVVRICCAQTGRRLRDISLEGKSSGSSMFVQSLRGDPFRDFNLSILAAYLSPSSIPEIVKVNMLTSKDAD 767
BLAST of mRNA_A-nodosum_M_contig1171.50.24 vs. uniprot
Match: A0A314Z089_PRUYE (Uncharacterized protein n=1 Tax=Prunus yedoensis var. nudiflora TaxID=2094558 RepID=A0A314Z089_PRUYE) HSP 1 Score: 278 bits (710), Expect = 1.240e-79 Identity = 156/375 (41.60%), Postives = 217/375 (57.87%), Query Frame = 1
Query: 37 KYRPRQFEYHPSHEDVVVFGTVKGELAVVVDLAKSHVRSSISSGL-SKDKHDSILGLCWLKRSPNRFVVGSSHGCLRLCDMGAKVPPSVSGVPAAPAAEGDWKFQRRYGDLSNRWNAVKEVSPESSSKRSVARGGAVDLGVAEVEPRIVTEFSRFDRLTSVHVNSTDDHMLVSGYTYGVTLFDISTGKVVRQFENIHEDHINISRFANHSPFVFATSSFDCTVKAWDSRMPAEKTPIYTCESEMGHVMLSFSPDDVFLLTSAVDNEVKQYLAVDGSLHMDLDLPRTGLDENFTRSYYTSSGRMILSGSSEEQMVRLHCAQTGRMIHEAEMYPGRKHGSLYVQSLRGDPHHDFRFSVLVNYRDPAYPLEIINIDML 1158
+ RPRQFEYHPS+ ++VFGT+ GE+ V+ +H I + S S+LGLCWL ++P++ V GS +G L+L D+ P EVS +S SVA F F++LTS+HVNSTDD +L SGY+ GV L+DI++G+ ++ F NIH++ IN+++FA+HSP++FATSSFD VK WD R + P YT S G+VM+ FSPDD++LL SAVDNEVKQ LA DG LHM+ ++ TG N+TRSYY + I+SGS +E +VR+ CAQTGR + + + S++VQSLRGDP F S+L P+ EII +++L
Sbjct: 21 RLRPRQFEYHPSNPSLMVFGTLDGEVVVL-----NHENGKIVGYVPSIGAMSSVLGLCWLNKNPSKLVAGSDNGSLKLLDINYMSP---------------------------------EVS-DSCCSSSVAT------------------FDDFEQLTSLHVNSTDDQLLASGYSKGVALYDIASGRRLQLFTNIHQEPINVAKFAHHSPYMFATSSFDHDVKMWDLRQNPMR-PCYTASSSRGNVMVCFSPDDLYLLVSAVDNEVKQLLAADGRLHMNFEIASTGSSHNYTRSYYMNGRDYIVSGSCDEDVVRICCAQTGRRLRDVYLEDKESGNSIFVQSLRGDPFRHFHMSILATSTRPSSKCEIIKVNLL 337
BLAST of mRNA_A-nodosum_M_contig1171.50.24 vs. uniprot
Match: A0A7J6WUH1_THATH (Transducin family protein / WD-40 repeat family protein n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6WUH1_THATH) HSP 1 Score: 291 bits (744), Expect = 5.200e-79 Identity = 158/385 (41.04%), Postives = 228/385 (59.22%), Query Frame = 1
Query: 37 KYRPRQFEYHPSHEDVVVFGTVKGELAVVVDLAKSHVRSSISSGLSKDKHDSILGLCWLKRSPNRFVVGSSHGCLRLCDMGAKVPPSVSGVPAAPAAEGDWKFQRRYGDLSNRWNAVKEVSPESSSKRSVARGGAVDLGVAEVEPRIVTEFSRFDRLTSVHVNSTDDHMLVSGYTYGVTLFDISTGKVVRQFENIHEDHINISRFANHSPFVFATSSFDCTVKAWDSRMPAEKTPIYTCESEMGHVMLSFSPDDVFLLTSAVDNEVKQYLAVDGSLHMDLDLPRTGLDENFTRSYYTSSGRMILSGSSEEQMVRLHCAQTGRMIHEAEMYPGRKHGSLYVQSLRGDPHHDFRFSVLVNYRDPAYPLEIINIDMLQDNDGEDLSSH 1191
++RPRQFEYHPS ++VFGT+ GE+ VV +H +I +S +S+LGLCWLKR P + + GS +G L+L D+ ++ PS++ +R+Y +N + F F++LTSVHVNSTD+ + SGY+ V L+DI +GK ++ F ++H HIN+ +FA+HSP +F TSSFD VK WD R + P YT S G+VM+ FSPDD +LL+SAVDNEVKQ LAVDG +HM ++P +G +N+TRSYY + I+SGSS+EQ+V + CAQTGR + + + G S++VQSLRGDP DF SVL Y P+ EII +++++ N+ ++ S+
Sbjct: 487 RFRPRQFEYHPSDSSLMVFGTLDGEIVVV-----NHESGNIVGYMSSGTLNSVLGLCWLKRDPLKLIAGSDNGSLQLYDI-RRMLPSIT--------------ERQY--TAN-----------------------------------IANFDDFEQLTSVHVNSTDEQFIASGYSKDVALYDIGSGKHLQTFTDMHRGHINVVKFAHHSPSIFVTSSFDQDVKMWDLRQRPLR-PCYTASSSRGNVMVCFSPDDHYLLSSAVDNEVKQLLAVDGRVHMKFEIPSSGSSQNYTRSYYMNGRDYIISGSSDEQVVHICCAQTGRRLRDVPLEAGGFGTSMFVQSLRGDPFRDFHMSVLAAYMRPSSKSEIIKVNLMKSNESDNQYSY 813 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1171.50.24 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1171.50.24 >prot_A-nodosum_M_contig1171.50.24 ID=prot_A-nodosum_M_contig1171.50.24|Name=mRNA_A-nodosum_M_contig1171.50.24|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1904bp MQRWKTDVICAGKYRPRQFEYHPSHEDVVVFGTVKGELAVVVDLAKSHVRback to top mRNA from alignment at A-nodosum_M_contig1171:130743..154881+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1171.50.24 ID=mRNA_A-nodosum_M_contig1171.50.24|Name=mRNA_A-nodosum_M_contig1171.50.24|organism=Ascophyllum nodosum dioecious|type=mRNA|length=24139bp|location=Sequence derived from alignment at A-nodosum_M_contig1171:130743..154881+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1171:130743..154881+ >mRNA_A-nodosum_M_contig1171.50.24 ID=mRNA_A-nodosum_M_contig1171.50.24|Name=mRNA_A-nodosum_M_contig1171.50.24|organism=Ascophyllum nodosum dioecious|type=CDS|length=5712bp|location=Sequence derived from alignment at A-nodosum_M_contig1171:130743..154881+ (Ascophyllum nodosum dioecious)back to top |