mRNA_A-nodosum_M_contig117.43.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig117.43.1 vs. uniprot
Match: B2KWI5_ECTSI (Transposase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI5_ECTSI) HSP 1 Score: 285 bits (729), Expect = 5.830e-86 Identity = 174/450 (38.67%), Postives = 255/450 (56.67%), Query Frame = 1
Query: 1 ISVSSIAKRLKGKVRMDASVGAGTVLTLEEEKSLEDALIWAAHRRLGVGRLELKQALTKLGNDGRLVPWDRVNGPGRKWLDLFLRRHPRLSERSCRIYEANRITADDEPRLRSFYANWKELITRLQPQPDHIWNTDETGVTPQGTKAKRVIAERGLK-----RWSVPSVLTPVKTPR*SLPSTRQGRPHHL**SSKANVCKRRGSGTVGLRGQNLPPLTPRLCRALYS*TTSRISIT-SSWRTAXXXXN--RTFSCLTATRRT*TSTLSS*P*PSILSSF-------------NCRLLL--------HMTQPLDVAAFGCFKKAVTAVLTSFPLQHGGKMPGKSDMAGVVKDAWAASFTVPQIKASFEGAGHRPVNMDRAINRLHGTGKRKARPDDRPPLADIPLAITEEELNSSLGPRAANKLQRAGHTIAGLRIATVLFGAFLKAQER 1263
++ S+++RL G V +DA VG TVLT+EEE +EDAL++AA +G+ R L++ + +L NDGR +PWD GPGR WLD F +RHP LSERS RIYEANRI +DDE RL++FY ++ E + + + DH+WNTDETG T QGTK + IAE G K R + +T V T + + + + K + ++G+N PP +R+++T SS+ N R F R ++ P +L + ++L H+ QPLDV +FG FK+ +T VL++FP ++GG++P KSDM G++ DAW SF+ Q +SF GAG PV+ +RA+ RL G GKRK R RPP+ DI +AI+++ L +LGPR +LQ+ G + G+ I TV+ GAF+KA+++
Sbjct: 34 VNKRSLSRRLSGDVSIDAKVGPRTVLTVEEENFVEDALLYAARHFIGIDRTALQEHVRQLCNDGRDIPWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETGSTSQGTKTMKAIAESGQKVVGAMRSNSRETVTVVVT----ISAAGATLAPWI-------IYKGQRLQADWVKGRNGPP-------------NARLAVTDSSFMQGTVFVNYIRDFHRQLLDR----GLINGTPHVLVLDGHASHVTYEVIKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEQQNISSFAGAGLWPVDGERAMGRLQGVGKRKERSGARPPVEDITVAISDKNLADNLGPRTVRELQQKGQCVKGILINTVMLGAFVKAKKK 455
BLAST of mRNA_A-nodosum_M_contig117.43.1 vs. uniprot
Match: A0A6H5L5E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E2_9PHAE) HSP 1 Score: 261 bits (666), Expect = 1.960e-79 Identity = 163/423 (38.53%), Postives = 234/423 (55.32%), Query Frame = 1
Query: 1 ISVSSIAKRLKGKVRMDASVGAGTVLTLEEEKSLEDALIWAAHRRLGVGRLELKQALTKLGNDGRLVPWDRVNGPGRKWLDLFLRRHPRLSERSCRIYEANRITADDEPRLRSFYANWKELITRLQPQPDHIWNTDETGVTPQGTKAKRVIAERGLKRWSVPSVLTPVKTPR*SLPSTRQGRPHHL**SSKANVCKRRGSGTVGLRGQNLPPLTPRLCRALYS*TTSRIS-ITSSWRTAXXXXN--RTFSCLTATRRT*TSTLSS*P*PSILSSF-------------NCRLLL--------HMTQPLDVAAFGCFKKAVTAVLTSFPLQHGGKMPGKSDMAGVVKDAWAASFTVPQIKASFEGAGHRPVNMDRAINRLHGTGKRKARPDDRPPLADIPLAITEEELNSSLGPRAANKLQRAG 1197
++ S+++RL G MDA VG TVLT+EEE +EDAL++AA +G+ R L++ + +L NDGR +PWD GPGR WLD F +RHP LSERS RIYEANRI +DDE RL++FY ++ E + + + DH+WNTDETG T QGTK +VI E G K V + ++ T L + + K + ++G+N PP +R++ I SS+ N R F R ++ P +L + ++L H+ QPLDV +FG FK+ +T VL++FP ++GG++P KSDM G++ DAW SF+ + +SF GAG PV+ +RA+ RL G GKRK R RPP+ DI AI+++ L +LGPR +LQ+ G
Sbjct: 34 VNKRSLSRRLTGDESMDAKVGPRTVLTVEEESFVEDALLYAARHFIGIDRTALQEHVRQLCNDGRDIPWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETGSTSQGTKTMKVITESGQK---VGGAMRSNSRENVTVVVTISAAGATL---APWIIYKGQRLQADWVKGRNGPP-------------NARLAVIDSSFMQGTVFVNYIRDFHRQLLDR----GLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEERNTSSFAGAGLWPVDGERAMGRLQGVGKRKERSGARPPVEDITGAISDKHLADNLGPRTVRELQQKG 433
BLAST of mRNA_A-nodosum_M_contig117.43.1 vs. uniprot
Match: A0A6H5JYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX7_9PHAE) HSP 1 Score: 261 bits (667), Expect = 7.570e-79 Identity = 167/437 (38.22%), Postives = 231/437 (52.86%), Query Frame = 1
Query: 1 ISVSSIAKRLKGKVRMDASVGAGTVLTLEEEKSLEDALIWAAHRRLGVGRLELKQALTKLGNDGRLVPWDRVNGPGRKWLDLFLRRHPRLSERSCRIYEANRITADDEPRLRSFYANWKELITRLQPQPDHIWNTDETGVTPQGTKAKRVIAERGLKRWSVPSVLTPVKTPR*SLPSTRQGRPHHL**SSKANVCKRRGSGTVGLRGQNLPPLTPRLCRALYS*TTSRISITSSWRTAXXXXNRTFSCLTATRRT*TSTLSS*P*PSILS---------------SFNCRL------LLHMTQPLDVAAFGCFKKAVTAVLTSFPLQHGGKMPGKSDMAGVVKDAWAASFTVPQIKASFEGAGHRPVNMDRAINRLHGTGKRKARPDDRPPLADIPLAITEEELNSSLGPRAANKLQRAGHTIAGLRIATVLFGAFL 1248
IS +S+++RL G+ +DA VG GTV+T EE +LED L++A + + +L + + +L NDGR +PW GPGR WL+ FL RH R+S R RIYE+NR+T+ ++ RL FY W + I QP DH+WNTDE+G T QGT+ +RV+AERG V + + ++ +T L + + G L G PP A Y T S + + F R + L P +L S N L + H+TQPLDVA FGCFKK + V+ +FP ++GG +P K DMAG++ AW +SFT KASF GAG PV+ +RA++RL KRK DRPPL D+P+A+T E L +G R L+ GHTI GLR++TV+ G FL
Sbjct: 48 ISKTSLSRRLSGECAIDARVGPGTVMTAAEEDALEDVLLYAGRNFIPLTTADLTERVRQLCNDGRPIPWTPDKGPGRSWLEGFLGRHERISLRLARIYESNRVTSAEDERLHKFYDFWGQFIDEHQPAADHVWNTDESGGTVQGTQGQRVMAERGQP---VVAQMRSTSRENCTIVTTINAAGAVLAPTIIFKGQRFNGDWVADLNG---PP------GAYYDCTESSFMCGEVF----IKYIKNFHKQLGDR----NLLDGKPHVLVLDGHASHVTLDVIKLAISLNIHLVQLPSHMSHITQPLDVAGFGCFKKELAKVIQAFPARNGGALPRKRDMAGMIGLAWGSSFTPEINKASFAGAGLWPVDRERALSRLLRP-KRKVTETDRPPLEDVPIAVTNERLEELIGDRGVRALRAKGHTITGLRVSTVVLGNFL 463
BLAST of mRNA_A-nodosum_M_contig117.43.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE) HSP 1 Score: 257 bits (656), Expect = 1.560e-75 Identity = 161/445 (36.18%), Postives = 228/445 (51.24%), Query Frame = 1
Query: 13 SIAKRLKGKVRMDASVGAGTVLTLEEEKSLEDALIWAAHRRLGVGRLELKQALTKLGNDGRLVPWDRVNGPGRKWLDLFLRRHPRLSERSCRIYEANRITADDEPRLRSFYANWKELITRLQPQPDHIWNTDETGVTPQGTKAKRVIAERGLKRWSVPSVLTPVKTPR*SLPSTRQGRPHHL**SSKANVCKRRGSG---TVGLRGQNL----------PPLTPRLC---------------RALYS*TTSRISITSSWRTAXXXXNRTFSCLTATRRT*TSTLSS*P*PSILSSFNCRLLLHMTQPLDVAAFGCFKKAVTAVLTSFPLQHGGKMPGKSDMAGVVKDAWAASFTVPQIKASFEGAGHRPVNMDRAINRLHGTGKRKARPDDRPPLADIPLAITEEELNSSLGPRAANKLQRAGHTIAGLRIATVLFGAFLKAQER 1263
S+ +RL G+V MDA VG GTV++ EEE S+ED L++A L V RL L + + L D R PWD GPG+ WL FL RHPR+ ER+ RIYEANR+T + EPR+ FY W L+ L+P+ DH+ NTDETG TPQG K + + G K V+ V+ ++R+ ++ GS T+ +GQ L PP C + + R I + + + + + PS S H+TQPLDV AFG FK+ VT VL+ + GG +P K D+ GV+ AW A+FT + ++SF GAG PVNM+RA++RL GT KR RPPL D+P+A+ E+L +G R +L+ AGH GLR++TV+ G+ ++ ++R
Sbjct: 37 SLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQK------VVESVRA------NSREN-------TTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTS--------HITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRLRGTAKRNENQTGRPPLKDVPIAVGNEQLEQDIGERGMRQLKAAGHLTTGLRVSTVMLGSVIRQRKR 453
BLAST of mRNA_A-nodosum_M_contig117.43.1 vs. uniprot
Match: A0A6H5L2E0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E0_9PHAE) HSP 1 Score: 250 bits (639), Expect = 8.370e-75 Identity = 157/414 (37.92%), Postives = 220/414 (53.14%), Query Frame = 1
Query: 10 SSIAKRLKGKVRMDASVGAGTVLTLEEEKSLEDALIWAAHRRLGVGRLELKQALTKLGNDGRLVPWDRVNGPGRKWLDLFLRRHPRLSERSCRIYEANRITADDEPRLRSFYANWKELITRLQPQPDHIWNTDETGVTPQGTKAKRVIAERGLKRWSV-PSVLTPVKTPR*SLPSTRQGRPHHL**SSKANVCKRRGSGTVGLRGQNLPPLTPRLCRALYS*TTSRISITSSWRTAXXXXNRTFSCLTATRRT*TSTLSS*P*PSILSSFNCRLLLHMTQPLDVAAFGCFKKAVTAVLTSFPLQHGGKMPGKSDMAGVVKDAWAASFTVPQIKASFEGAGHRPVNMDRAINRLHGTGKRKARPDDRPPLADIPLAITEEELNSSLGPRAANKLQRAGHTIAGLRIATVLFGAFL 1248
+SI R +GKV M+A VG T+L+ EEE SLED L++AA L V R+ L+ A+ +L NDGR + WD GPG+ WL FLRRHPR++ERS RIYEANR+T D+EPR+ F+ W L+ ++P +H+ NTDET + A V+A ++ P+++ + + + R G C +G+ ++G + L R + + + + ++ + S PS S H+TQPLDV AFG FKK+VT VL SF GG +P K DM GV+ DAW SF K+SF GAG PVN +RA+ +L GT +K R D+RPPL D+P+A E+L +G RA L+ GHT+ G+R TVL L
Sbjct: 15 TSIEDRRRGKVAMNAKVGPETILSNEEEDSLEDILLFAARNFLAVDRVHLRDAVRRLCNDGRRIIWDPDEGPGKDWLAGFLRRHPRVAERSTRIYEANRMTEDEEPRMVQFHERWAALLDEVKPAANHVHNTDETAGCSREPAATNVVANISADDHTLAPTIIFKGQRLQTDWFAERNGP------EGARYTC----TGSSFMQGDVFIAYLKDFHKQLGD----RGLLDGKPHILLLDGHASHVSVEVSKLAMNLKIISFQLPSHTS--------HITQPLDVVAFGRFKKSVTRVLASFYHNSGGSLPLKRDMPGVIADAWKLSFAPEINKSSFAGAGLWPVNKERALGQLKGTANKKERRDERPPLQDVPIAALNEQLEIDIGERALRVLKGQGHTVTGIREGTVLLDGLL 406
BLAST of mRNA_A-nodosum_M_contig117.43.1 vs. uniprot
Match: A0A6H5JK80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK80_9PHAE) HSP 1 Score: 254 bits (649), Expect = 8.790e-75 Identity = 167/454 (36.78%), Postives = 248/454 (54.63%), Query Frame = 1
Query: 1 ISVSSIAKRLKGKVRMDASVGAGTVLTLEEEKSLEDALIWAAHRRLGVGRLELKQALTKLGNDGRLVPWDRVNGPGRKWLDLFLRRHPRLSERSCRIYEANRITADDEPRLRSFYANWKELI---------TRLQPQPDHIWNTDETGVTPQGTKAKRVIAERGLKRWSVPSVLTPVKTPR*SLPSTRQGRPHHL**SSKANVCKRRGSGTVGLRGQNLPPLTPRLCRALYS*TTSRISIT-SSWRTAXXXXN--RTFSCLTATRRT*TSTLSS*P*PSILSSF-------------NCRLLL--------HMTQPLDVAAFGCFKKAVTAVLTSFPLQHGGKMPGKSDMAGVVKDAWAASFTVPQIKASFEGAGHRPVNMDRAINRLHGTGKRKARPDDRPPLADIPLAITEEELNSSLGPRAANKLQRAGHTIAGLRIATVLFGAFLKAQER 1263
++ S+++RL G V MDA VG TVLT+EEE +EDAL++AA +G+ R L++ + +L NDGR + WD GPGR WLD F +RHP LSERS RIYEANRI +DDE L++FY ++ E + T+++ + + G TPQGTK +VIAE G K V + ++ T L + + K + ++G+N PP +R+++T SS+ N R F R ++ P +L + ++L H+ QPLDV +FG FK +T VL++FP ++GG++P KSDM G++ DAW SF+ Q +SF GAG PV+ +RA+ RL G GKRK R RPP+ DI +AI++++L +LGPR +LQ+ G + G+ I TV+ GAF+KA+++
Sbjct: 34 VNKRSLSRRLSGDVSMDAKVGPRTVLTVEEENFVEDALLYAARHFIGIDRTALQEHVRQLCNDGRDISWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETCLQTFYKDFGEFVDKENIPTCGTQMRQEYTDLERA-VPGSTPQGTKTMKVIAESGQK---VVGAMRSNSRDNVTVVVTISAAGATL---APWIIYKGQRMQADWVKGRNGPP-------------NARLAVTDSSFMQGTVFVNYIRDFHRQLLDR----GLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKWEITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEEQNISSFAGAGLWPVDGERAMGRLQGVGKRKERSGARPPVEDITVAISDKDLADNLGPRTVRELQQKGQCVKGILINTVMLGAFVKAKKK 463
BLAST of mRNA_A-nodosum_M_contig117.43.1 vs. uniprot
Match: A0A6H5L1T0_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1T0_9PHAE) HSP 1 Score: 256 bits (655), Expect = 3.780e-74 Identity = 166/439 (37.81%), Postives = 233/439 (53.08%), Query Frame = 1
Query: 1 ISVSSIAKRLKGKVRMDASVGAGTVLTLEEEKSLEDALIWAAHRRLGVGRLELKQALTKLGNDGRLVPWDRVNGPGRKWLDLFLRRHPRLSERSCRIYEANRITADDEPRLRSFYANWKELITRLQPQPDHIWNTDETGVTPQGTKAKRVIAERGLKRWSVPSVLTPVKTPR*SLPSTRQGRPHHL**SSKANVCKRRGSGTVGLRGQNLPPLTPR----LCRALYS*TTSRISITSSWRTAXXXXNRTF--------SCLTATRRT*TSTLSS*P*PSILSSFNCRLLL------HMTQPLDVAAFGCFKKAVTAVLTSFPLQHGGKMPGKSDMAGVVKDAWAASFTVPQIKASFEGAGHRPVNMDRAINRLHGTGKRKARPDDRPPLADIPLAITEEELNSSLGPRAANKLQRAGHTIAGLRIATVLFGAFLKAQER 1263
+ ++S+ R+K KV +DA VG GTVL+ EEE +ED LI+A+ L +GR EL+ A+ + DGR VPWD GPG WL+ F+ RHP LSER+ IYEANRI D EPRL++FY W E + + P+ I NTDET TPQGTK+ + I RG K VP ++ +T H T+ +GQ + P + + A Y+ T S + + + + L +T + S+ S + L H+TQPLDV FG FK +T VLT++PL++GG+ P K DMAGV+ +AWA SFT KA+F+G+G PV+M++AINRLH KRK R DRP D+ + ++++L LG A +L+R G I GLR+ TV G + +R
Sbjct: 48 LPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYKAWAEYLEETKLPPERILNTDETSSTPQGTKSGKAIVARGTK---VPGARRSNSRENTTVVATIGADGHTF-------------HPTIIFKGQRMQPAWIQDNNGVPDAKYTVTESSFIQSHVFLDYLRDLRKQLDARGLLGKAALVLDGHASHTTFDA---ISLGISLDMDLFQLPSHTSHITQPLDVGTFGTFKMEITKVLTAYPLKNGGRSPVKRDMAGVIAEAWAGSFTPENNKAAFKGSGLWPVSMEKAINRLHS--KRKQRDHDRPIREDLAVVASKDQLERDLGRAALLELKRHGLMIEGLRVNTVFLGGLTRLTKR 465
BLAST of mRNA_A-nodosum_M_contig117.43.1 vs. uniprot
Match: A0A6H5JJ12_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ12_9PHAE) HSP 1 Score: 257 bits (656), Expect = 9.270e-74 Identity = 161/445 (36.18%), Postives = 228/445 (51.24%), Query Frame = 1
Query: 13 SIAKRLKGKVRMDASVGAGTVLTLEEEKSLEDALIWAAHRRLGVGRLELKQALTKLGNDGRLVPWDRVNGPGRKWLDLFLRRHPRLSERSCRIYEANRITADDEPRLRSFYANWKELITRLQPQPDHIWNTDETGVTPQGTKAKRVIAERGLKRWSVPSVLTPVKTPR*SLPSTRQGRPHHL**SSKANVCKRRGSG---TVGLRGQNL----------PPLTPRLC---------------RALYS*TTSRISITSSWRTAXXXXNRTFSCLTATRRT*TSTLSS*P*PSILSSFNCRLLLHMTQPLDVAAFGCFKKAVTAVLTSFPLQHGGKMPGKSDMAGVVKDAWAASFTVPQIKASFEGAGHRPVNMDRAINRLHGTGKRKARPDDRPPLADIPLAITEEELNSSLGPRAANKLQRAGHTIAGLRIATVLFGAFLKAQER 1263
S+ +RL G+V MDA VG GTV++ EEE S+ED L++A L V RL L + + L D R PWD GPG+ WL FL RHPR+ ER+ RIYEANR+T + EPR+ FY W L+ L+P+ DH+ NTDETG TPQG K + + G K V+ V+ ++R+ ++ GS T+ +GQ L PP C + + R I + + + + + PS S H+TQPLDV AFG FK+ VT VL+ + GG +P K D+ GV+ AW A+FT + ++SF GAG PVNM+RA++RL GT KR RPPL D+P+A+ E+L +G R +L+ AGH GLR++TV+ G+ ++ ++R
Sbjct: 278 SLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQK------VVESVRA------NSREN-------TTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTS--------HITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRLRGTAKRNENQTGRPPLKDVPIAVGNEQLEQDIGERGMRQLKAAGHLTTGLRVSTVMLGSVIRQRKR 694
BLAST of mRNA_A-nodosum_M_contig117.43.1 vs. uniprot
Match: A0A6H5JGP6_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP6_9PHAE) HSP 1 Score: 239 bits (611), Expect = 1.270e-69 Identity = 168/488 (34.43%), Postives = 242/488 (49.59%), Query Frame = 1
Query: 70 TVLTLEEEKSLEDALIWAAHRRLGVGRLELKQALTKLGNDGRLVPWDRVNGPGRKWLDLFLRRHPRLSERSCRIYEANRITADDEPRLRSFYANWKELITRLQPQPDHIWNTDETGVTPQGTKAKRVIAERGLK---------RWSVPSVLTPVKTPR*SLPSTRQGRPHHL**SSKANVCKRRGSGTVGLRGQNLPPLTPRLCRALYS*TTSRISIT-SSWRTAXXXXN--RTFSCLTATRRT*TSTLSS*P*PSILSSF-------------NCRLLL--------HMTQPLDVAAFGCFKKAVTAVLTSFPLQHGGKMPGKSDMAGVVKDAWAASF-------------------------------------TVP--------------------QIKASFEGAGHRPVNMDRAINRLHGTGKRKARPDDRPPLADIPLAITEEELNSSLGPRAANKLQRAGHTIAGLRIATVLFGAFLKAQER 1263
TVLT+E E +EDAL++AA +G+ R L++ + +L NDGR +PWD GPGR WLD F +RHP LSE S RIYEANRI +DDE RL++FY ++ E + + + DH+WNTDETG TPQGTK +VIAE G K R +V V+T + T +L + + K + +G+N PP +R+++T SS+ N R F R ++ P +L + ++L H+ QPLDV +FG FK+ + VL++F ++GG++P KSDM G++ DAW SF TVP Q +SF GAG PV+ +RA+ RL G GKRK R RPP+ DI +AI++++L +LGPR +LQ+ G + G+ I TV+ GAF+KA+++
Sbjct: 16 TVLTVEGENFVEDALLYAARHFIGIDRAALQEHVRQLCNDGRDIPWDAAVGPGRSWLDGFFKRHPALSECSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETGSTPQGTKTMKVIAESGQKVVGAIHSKSRENVTVVVT-ISTVGATL--------------APWIIYKGQRLQADWAKGRNAPP-------------NARLAVTNSSFMQGIVFVNYIRDFHRQLLDR----GLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREIPKVLSAFQARNGGRVPAKSDMLGLLGDAWLRSFSEEQNISSFAGAGLWLVDGERAMGQLQGWRFPTRILPTVPAKSDMLGILGDAWLRSFSEEQNISSFAGAGLWPVDGERAMGRLQGVGKRKERSGARPPVEDITVAISDKDLADNLGPRTVRELQQKGQCVKGILINTVMVGAFVKAKKK 471
BLAST of mRNA_A-nodosum_M_contig117.43.1 vs. uniprot
Match: A0A6H5JS97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS97_9PHAE) HSP 1 Score: 234 bits (596), Expect = 7.640e-67 Identity = 154/439 (35.08%), Postives = 218/439 (49.66%), Query Frame = 1
Query: 10 SSIAKRLKGKVRMDASVGAGTVLTLEEEKSLEDALIWAAHRRLGVGRLELKQALTKLGNDGRLVPWDRVNGPGRKWLDLFLRRHPRLSERSCRIYEANRITADDEPRLRSFYANWKELITRLQPQPDHIWNTDETGVTPQ-GTKAKRVIAERGLKRWSVPSVLTPVKTPR*SLPSTRQGRPHHL**SSKANVCKRRGSGTVGLRGQNLPPLTPRLCRALYS*TTSRISITSSWRTAXXXXNRTFSCLTATRRT*TSTLSS*P*PSILS---------------SFNCRL------LLHMTQPLDVAAFGCFKKAVTAVLTSFPLQHGGKMPGKSDMAGVVKDAWAASFTVPQIKASFEGAGHRPVNMDRAINRLHGTGKRKARPDDRPPLADIPLAITEEELNSSLGPRAANKLQRAGHTIAGLRIATVLFGAFLKAQE 1260
SS+ +RL G MDA VG GTV+T EE +++ L++A + + +L + +++L NDGR +PW+ GPG+ WL FL RH +S R RIYE+NR+T+ ++ RL FY W E + +P DHIWNTDE+G GT A A+ + +++T + L T + K + + Q+ PP C SS+ R+ + L P +L S N L + H+TQPLDVA FGCFKK +T + +FP HGG +P K DMA V+ AW+ SFT KASF GAG PV+ +RA++RL KRK R DRPPL D+P+A++ + L LG RA KL GHT+ GLR++TV G +L ++
Sbjct: 51 SSLQRRLDGNCAMDARVGPGTVMTKAEEDAVKYLLLYAGRNFIPLTTADLTERVSRLCNDGRPIPWNSDKGPGKDWLKGFLGRHEGISHRLARIYESNRVTSSEDERLHKFYGFWAEFLGEHRPAADHIWNTDESGTAGLCGTGAAGGPADAFHFAENC-TIVTTINAAGAVLAPTI--------------IFKGQRFNEDWIVDQDGPPGATYTCTE------------SSFMCGDVFIKYIMDFHEQLRKR--NLLDGKPHVLVLDGHASHVSLEVVELARSLNIHLVQLPSHMSHITQPLDVAGFGCFKKELTKAIQAFPATHGGALPRKRDMASVIGQAWSTSFTPDINKASFAGAGLWPVDKERALSRLLKP-KRKERETDRPPLQDVPIAVSNDRLEELLGERAVRKLLGEGHTLTGLRVSTVFLGDYLPSKR 459 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig117.43.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig117.43.1 >prot_A-nodosum_M_contig117.43.1 ID=prot_A-nodosum_M_contig117.43.1|Name=mRNA_A-nodosum_M_contig117.43.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=158bp MDASVGAGTVLTLEEEKSLEDALIWAAHRRLGVGRLELKQALTKLGNDGRback to top mRNA from alignment at A-nodosum_M_contig117:544230..545802+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig117.43.1 ID=mRNA_A-nodosum_M_contig117.43.1|Name=mRNA_A-nodosum_M_contig117.43.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1573bp|location=Sequence derived from alignment at A-nodosum_M_contig117:544230..545802+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig117:544230..545802+ >mRNA_A-nodosum_M_contig117.43.1 ID=mRNA_A-nodosum_M_contig117.43.1|Name=mRNA_A-nodosum_M_contig117.43.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=474bp|location=Sequence derived from alignment at A-nodosum_M_contig117:544230..545802+ (Ascophyllum nodosum dioecious)back to top |