mRNA_A-nodosum_M_contig1166.6.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1166.6.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 434 bits (1117), Expect = 9.730e-127 Identity = 288/727 (39.61%), Postives = 395/727 (54.33%), Query Frame = 1
Query: 301 DLRVLAVEAATLVIALRSKSPDAVPAVHEATRSLPDEVTDVLETLGDICESLGKVRYRKQELEALTYKITYVTACVIIKRQLAAXXXXXXXXXXXXXXXNTTAVTTAPAAWKNQEIDFAPLTECVEAVGKIVRRTRRRGRVSIMLTAASGGSKSRKRSITELHGRVDELTRELGLAGIVAVFKGVLLGAGSDTAEVLSK-DQVLMAQQAQVSRQATVPTLTPPRREWHVSRQRVMDMVSNNLFQSHEQPQVVGVVGESGSGKTIIAAEIVRSAQVLEFFADGVIWLSVDEGAASRLPSLMLELARMVRGEIVGGDSSTPAGASSKSSENTGVEDGASYVRDAMAGNFSAGRGPLRCLVVADNVWEKEVTARLRDTGMWVLVTTSREDAVRSVGGKPVRINRMFGADAELLLKRASGLPEGVGWQEGARDLVELCGRVALDVAYVGRWSTIREGNHATAWSRAADTIRFELQNPPLTWDTLSSDPSKDEPCVMKGNSGETVSLSLESEMELIKDDARATRRSAVLRAGFRALVDSSRGSRVQELFLSLAVMPDGHEFALGDAAILLGVRVGDDFPDEEEEVRAA--LHTLERCAIVTAREETYHMHDVHLGFAREVLAGRSDVRRLAVERWTSFISSLNTILTVDPHILAQLWSAVERVGGEGWRATRPYERALTRLDGADPRYRAGIETVAKFRKVDGEWAGASAMWQHLLALEQQREEAPDVRYLL 2472
D+ A EAA L + + S DAV + LP + V +TL I ++ V+ ++EL AL + TY+TAC ++K +L E+D APL +CVEA R RRG+VS ++ A S K I L+ VD LT +LGLAGI VL G D + L + DQ L + + A VP P R+ WHV R+ M V + L S ++ VV + G SGSGKT +AAEIVRS +V E F+DG++WL V+EGA RLPSLML+LARMV EI G P+ + ED A+Y++ + R L+CLVVADNVWE++V ++L +TGMWVL++T E V+ GK V ++ + ADAE +LKRA+ LP + A DL++LCGRVA+DVA+VGRWST+R + +WS AA TIR E++ + DP D ++ A RR A+L+ GF L S RVQ L+LSLAVMPDGH F+L DAA+LL D P E+E A + LER +I+ + + TY MHD H FARE L R VRR A++RWT ++SSL+ + + D ++L LW A+ER+GG+GW TRPYE+AL + +D R E V F++ + GASA W+ LL +E+ RE D ++L
Sbjct: 4 DISDSAAEAARLALEIGSTISDAVSCAVDLGEELP-VIKPVFKTLKAIRTTVETVKNNREELAALEQRCTYITACFVVKCRLI-----------------------------ESEVDVAPLKDCVEAAKNFAERCSRRGKVSRVIKAFSD-----KSEIAGLNSSVDRLTTDLGLAGIA-----VLEGKVDDMKKTLDRIDQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGS-DRACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSAS----------EDSATYIKQRLEEGHKGRR--LKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEK-------VGHDPDNDS-----------------------AENIPAKRRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLY----DRSPSTEDEASAGGVVDVLERWSIIRSAQGTYRMHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRSTDRYVLKGLWLAIERLGGDGWGKTRPYEKALGMMLESDALLRTTAEAVGWFQEAQEDLEGASASWRRLLEVEK-RELGADHPFVL 642
BLAST of mRNA_A-nodosum_M_contig1166.6.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 406 bits (1044), Expect = 1.950e-116 Identity = 266/725 (36.69%), Postives = 392/725 (54.07%), Query Frame = 1
Query: 322 EAATLVIALRSKSPDAVPAVHEATRSLPDEVTDVLETLGDICESLGKVRYRKQELEALTYKITYVTACVIIKRQLAAXXXXXXXXXXXXXXXNTTAVTTAPAAWKNQEIDFAPLTECVEAVGKIVRRTRRRGRVSIMLTAASGGSKSRKRSITELHGRVDELTRELGLAGIVAVFKGVL----------------LGAGSDT--AEVLSKDQVLMAQQAQV-SRQATVPTLTPPRREWHVSRQRVMDMVSNNLFQSHEQPQVVGVVGESGSGKTIIAAEIVRSAQVLEFFADGVIWLSVDEGAASRLPSLMLELARMVRGEIVGGDSSTPAGASSKSSENTGVEDGASYVRDAMAGNFSAGRGPLRCLVVADNVWEKEVTARLRDTGMWVLVTTSREDAVRSVGGKPVRINRMFGADAELLLKRASGLPEGVGWQEGARDLVELCGRVALDVAYVGRWSTIREGNHATAWSRAADTIRFELQNPPLTWDTLSSDPSKDEPCVMKGNSGETVSLSLESEMELIKDDARATRRSAVLRAGFRALVDSSRGSRVQELFLSLAVMPDGHEFALGDAAILLGVRVGDDFPDEEEEVRAALHTLERCAIVTAREETYHMHDVHLGFAREVLAGRSDVRRLAVERWTSFISSLNTILTVDPHILAQLWSAVERVGGEGWRATRPYERALTRLDGAD-PRYRAGIETVAKFRKVDGEWAGASAMWQHLLALEQ 2436
E A + + S + D + V + LP + VL TL I E + V+ ++L L + TY+TAC I+K + E+D APL +CV AV K V R R+RG++S +L A K I +L R+ +L +L LAGI ++ K ++ +G + E+L+K + ++ Q + ++ A VP TP + WHV R+ V + V L + P +VG+VG+SG+GKT A+ IV S V E F+DG++WL V+EG LP LML+LA+MV +I G P+G+ +DG +YV+ + N G+G L+CLVVADNVWE +V ++L +TGMW+L++T E+ V+ G+ V ++ + A+AE +L+RA+ L + A+DL+ELCGRVA+D+A+VGRWST+R TAWS AA +R E+ +T ++ S +D+R RR A+L+AGF L S RVQ L+LSLAV+PDGH F + DAA+LL R + ++E V + LER I+ + E TY MHD H FARE L R DVRR A++R ISSL + +++ + L LW+ V+RVGG+GW TRPYE+AL LD ++ P +R IE VA F++ +W GA+ W+ LLA+E+
Sbjct: 11 EVAKIASKMGSAAADVIQFVADLGEELP-LLQPVLRTLRIIREKVETVKRNPEDLTVLHQRCTYITACFIVKCRHGYT-----------------------------ELDVAPLEDCVNAVEKFVERYRKRGKISRVLKAVGD-----KGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQAL-DADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGS----------DDGLAYVKQQVE-NGHGGKG-LKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKGGVTAESNGS------------------------------EDSRVNRRRAILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDR--EPGTEDEASVGGVVEALERWTIIRSVEATYRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINRYTLKHLWAGVQRVGGDGWATTRPYEKALEALDESNSPLFRETIEAVAWFQEAQEDWTGANRTWRRLLAVEE 655
BLAST of mRNA_A-nodosum_M_contig1166.6.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI) HSP 1 Score: 391 bits (1005), Expect = 1.820e-111 Identity = 271/736 (36.82%), Postives = 394/736 (53.53%), Query Frame = 1
Query: 316 AVEAATLVIALRSKSPDAVPAVHEATRSLP------DEVTDVLETLGDICESLGKVRYRKQELEALTYKITYVTACVIIKRQLAAXXXXXXXXXXXXXXXNTTAVTTAPAAWKNQEIDFAPLTECVEAVGKIVRRTRRRGRVSIMLTAASGGSKSRKRSITELHGRVDELTRELGLAGIVAVFKGVLLGAGSD---------TAEVLSKDQVLMAQQAQVSRQ-------ATVPTLTPPRREWHVSRQRVMDMVSNNLFQSHEQPQVVGVVGESGSGKTIIAAEIVRSAQVLEFFADGVIWLSVDEGAASRLPSLMLELARMVRGEIVGGDSSTPAGASSKSSENTGVEDGASYVRDAMAGNFSAGRGPLRCLVVADNVWEKEVTARLRDTGMWVLVTTSREDAVRSVGGKPVRINRMFGADAELLLKRASGLPEGVGWQEGARDLVELCGRVALDVAYVGRWSTIREGNHATAWSRAADTIRFELQNPPLTWDTLSSDPSKDEPCVMKGNSGETVSLSLESEMELIKDDARATRRSAVLRAGFRALVDSSRGSRVQELFLSLAVMPDGHEFALGDAAILLGVRVGDDFPDEEEEVRAA--LHTLERCAIVTAREETYHM---------HDVHLGFAREVLAGRSDVRRLAVERWTSFISSLNTILTVDPHILAQLWSAVERVGGEGWRATRPYERALTRLDGADPRYRAGIETVAKFRKVDGEWAGASAMWQHLL 2424
A E L + + S + D++ + E LP + VL+TL I E++ V+ ++EL+ L + Y+TACV++K + ++ E+D P+ EC+EA G++V R RG+++ +L A+S K I + + +L +L LAG+ +L G SD T + +++ +L ++ + R A +P TP R+ WHV R VM+ V L + P +VG+VG+SGSGKT A+EIVRS +V + F+DGV+WL+V+ GA RLPSLML+LA M+ E+ G +T +DGA+Y+++ M G+G L+CLVVADNVWEKEV +L +TGMWVL++T E+ V G+ V ++ M +AE +L++AS LP + A DL+ELCGRVA+D+A+VGRWST+R + TAWS AA +R E+ K E GE VS ++ + R RR AVL+AGF L S RVQ L+LSLAV+PDG F + DAA+LL D P E+E AA + LER +++ + Y M HD H FARE L R DVRR A+ RWT ISSL+T+ +V H + LW VE+VGG+GW++TRPYE AL ++ +DP + VAKF++ + +W A A + LL
Sbjct: 9 AAEVTKLGLKMGSATVDSITFMAELGEDLPFGEPVLPHLRPVLKTLTAIRETVENVQNNQEELQTLYRRCVYLTACVVVKSRQSSC----------------------------SEMDLTPVEECLEAAGELVERCGGRGKMTRVLNASSD-----KEEIARMKANIRDLEADLSLAGVA-----ILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALT-AVGGPHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEVGGRRPATS-------------DDGAAYIKEKMQRGHG-GKG-LKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEM--------------GKIE--------GERVSGTVV--------ETRDARRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLY----DRKPSAEDEASAAGVVEILERWSVLRSIRGCYRMAWRGGHYVLHDAHSDFAREKLMDRGDVRRPALVRWTRNISSLDTLRSVRWHDVRDLWLGVEQVGGDGWKSTRPYEAALAGMEDSDPLLPTSVVAVAKFQRHEEDWEEAIATCRRLL 656
BLAST of mRNA_A-nodosum_M_contig1166.6.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE) HSP 1 Score: 380 bits (976), Expect = 4.890e-109 Identity = 271/733 (36.97%), Postives = 377/733 (51.43%), Query Frame = 1
Query: 364 DAVPAVHEATRSLPDEVTDVLETLGDICESLGKVRYRKQELEALTYKITYVTACVIIKRQLAAXXXXXXXXXXXXXXXNTTAVTTAPAAWKNQEIDFAPLTECVEAVGKIVRRTRRRGRVSIMLTAASGGSKSRKRSITELHGRVDELTRELGLAGIVAVFKGV----LLGAGSDTAEVLSKDQVLMAQQAQVSRQ-------ATVPTLTPPRREWHVSRQRVMDMVSNNLFQSHEQPQVVGVVGESGSGKTIIAAEIVRSAQVLEFFADGVIWLSVDEGAASRLPSLMLELARMVRGEIVGGDSSTPAGASSKSSENTGVEDGASYVRDAMAGNFSAGRGPLRCLVVADNVWEKEVTARLRDTGMWVLVTTSREDAVRSV-GGKPVRINRMFGADAELLLKRASGLPEGVGWQEGARDLVELCGRVALDVAYVGRWSTIREGNHATAWSRAADTIRFELQNPPLTWDTLSSDPSKDEPCVMKGNSGETVSLSLESEMELIKDDARATRRSAVLRAGFRALVDSSRGSRVQELFLSLAVMPDGHEFALGDAAILLGVRVGDDFPDEEEEVRAALHTLERCAIVTAREETYHMHDVHLGFAREVLAGRSDVRRLAVERWTSFISSLNTILTVD-PHILAQLWSAVERVGGEGWRATRPYERALTRLDGADPRYRAGIETVAKFRKVDGEWAGASAMWQHLLALEQQREEA--PDVRYLLKELVEAAEKRGAGTE 2517
D + + EA+ LP + VL+TL + AL + TY+T CVI++ + + + PL ECV AVG V R RRG +S +L A K I L R+++L +L LAGI V V L DT + LS Q L +R ATVP TP R+ WHV R+ VM V + L P++VG+VG+SGSGKT AAEIVRS +V E F+DG++WLSV++GA RL +LM+ LAR+V +I G PAG ++DGA+Y R M G+G L+CLVVADNVWE+ V ++L +TGMWVL++T E VRS GG V ++ + DA +L+RAS L + + A +LVELCGRVA+DVA+VGRWST+R + TAWS AA +R +++ ++ + D RA RR AVL+AGF L S R+ L+LSLAV+PDGH F DA LL R P++E + TLER + + Y MHD H GFAR+ + R VR+ AV+RWT +SSL+ + + D P +L LW AV R+GGE WR RPY AL+ +D ++P ++++ F+ G+W AS + +LA+++++ A P L+ LV AE+ G E
Sbjct: 11 DVLAFLTEASDGLP-LIEPVLKTLKAVXXXXXXXXXXXXXXAALYQRCTYITGCVIVRCRKGSSG-----------------------------LKATPLMECVNAVGAFVERCSRRGMLSRVLKATDD-----KEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDAL-PGEGGPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDIGGSVGRRPAG----------LDDGAAYTRQRMQSGHG-GKG-LKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKVRSKIERSRVSDNVW---------------------------------DIRAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRA--PCPEDEVSTEELIRTLERWSALRTEGGAYRMHDAHSGFARDCVMDRGYVRKPAVKRWTLRLSSLDVLRSFDDPFVLKGLWLAVGRLGGESWRNVRPYAAALSEMDESNPLLLKSLQSLGWFQDAQGDWQSASDTCRRILAVKRRQLGADHPHTILTLRALVYCAERLGNAEE 660
BLAST of mRNA_A-nodosum_M_contig1166.6.1 vs. uniprot
Match: A0A6H5L0N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N2_9PHAE) HSP 1 Score: 382 bits (981), Expect = 5.420e-106 Identity = 326/921 (35.40%), Postives = 427/921 (46.36%), Query Frame = 1
Query: 301 DLRVLAVEAATLVIALRSKSPDAVPAVHEATRSLPDEVTDVLETLGDICESLG-KVRYRKQELEALTYKITYVTAC--VIIKRQLAAXXXXXXXXXXXXXXXNTTAVTTAPAAWKNQE---------------------IDFAPLTECVEAVGKIVRRTRRRGRVSIMLTAASGGSKSRKRSITELHGRVDELTRELGLAGIVAVFKGVLLGAGSD-------TAEVLSKDQVLMAQQAQVSR-QATVPTLTPPRREWHVSRQRVMDMVSNNLFQS-----------------------------HEQPQVVGVVGESGSGKTIIAAEIVRSAQVLEFFADGVIWLSVDEGAASR--LPSLMLELARMVRGE--IVGGDSSTPAGASSKSSENTGVEDGASYVR---------------------------------------------DAMAGNFSAGRGPLRCLVVADNVWEKEVTARLRDTGMWVLVTTSREDAVRSVGGKPVRINRMFGADAELLLKRASGLPEGVGWQEGARDLVELCGRVALDVAYVGRWSTIREGNHATAWSRAADTIRFELQNPPLTWDTLSSDPSKDEPCVMKGN-------------------------SGETVSLSLESEMELIKDD-----------------ARATRRSAVLRAGFRALVDSSRGSRVQELFLSLAVMPDGHEFALGDAAILL----GVRVGDDF-------------PDEEEEVRAALHTLERCAIVTAR------------EETYHMHDVHLGFAREVLAGRSDVRRLAVERWTSFISSLNTILTVDPHILAQLWSAVERVGGEGWRATRPYERALTRLDGADPRYRAGIETVAKFRKVDGEWAGASAMWQHLLALEQQREEAPDVRYLLKELVEAAEKRGAGTEA 2520
D+R LA ++ L IA+ SK+PDA V V + E+L I + +V+ R++EL A+ T V A V++ ++ XXXXXXXXXX + TA +A + +D PL ECVEA+G +V R R R + + GS S K I +L+GRV + RE+GLAGI+AVFKGVL G ++VL++ +V +A+Q + S +A VP+L P R WHV R+ V+ V +L + P+VVG+VGESG+GKT AAEIVR +VLE+F+DGV+WL V+EG R LPSLM LAR++ E I G + P G D G R PLRCLV DNV E EV A L +TG+WVL+TT D + VGGKPV I R+ DA+ +L+RAS LP GAR+L+ELCGR LD+A+VGRWST+ AW AAD+IR EL N LT D + G G S+ SE R ++R A+LRAGFR LV + + L+LSLAV+PDGHEF + DAA+LL R GD R L LE I+TA ++ MH+ H FARE+L + AV RW F+SSL+ +L DP LA+LWSAVE VGG+GWR RPYE AL +D DP R + VAKFR +G+W GAS MW+ LL +EQ+ +E P+V Y + ELV AAE G EA
Sbjct: 26 DVRDLAADSQKLAIAMASKTPDAQYTVQRLVADHSPAVKGIHESLLAITAKIDLEVKTRREELLAVAKMCTLVAAASVVVVSQEHEQEXXXXXXXXXXEQRHGPSWKGTARSATCGSDNXXXXXXXXXXXXCSERMMRLLDVGPLRECVEALGFLVGRKDARRRTLLRRS----GSSSIKDEIADLNGRVLDAAREMGLAGILAVFKGVLEDTGGGYGSSPGGISDVLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGPRQ--RRPLRCLVAVDNVCEAEVVATLAETGVWVLLTTRDWDVIPRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTVLDLAFVGRWSTVCGSKDPMAWRNAADSIRAELNNLELT----REDDDARSSVTVAGKVXXXXXXXXXXXXXXXXXXXXXXIEDGAPASVITGSEXXXXXXXXXXXXXXXXXXXXXXXHGRESQRKAILRAGFRDLVSVAGDDDSRLLYLSLAVLPDGHEFTVKDAAVLLHGDGSARCGDGIVAAAGGRGXXXXXXXXXXXXRRVLRVLEARGILTASGGRGGRRRSASSPSSFRMHEAHSAFAREILLDCPKILGWAVGRWVGFLSSLDAVLFFDPFALARLWSAVEDVGGKGWRDGRPYETALEAIDNYDPLCRVCLVAVAKFRGAEGDWDGASLMWRRLLTVEQRAQE-PNVMYPVWELVNAAENGGKPEEA 935
BLAST of mRNA_A-nodosum_M_contig1166.6.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE) HSP 1 Score: 350 bits (898), Expect = 3.510e-98 Identity = 236/623 (37.88%), Postives = 325/623 (52.17%), Query Frame = 1
Query: 946 VPTLTPPRREWHVSRQRVMDMVSNNLFQSHEQPQVVGVVGESGSGKTIIAAEIVRSAQVLEFFADGVIWLSVDEGAASRLPSLMLELARMVRGEIVGGDSSTPAGASSKSSENTGVEDGASYVRDAMAGNFSAGRGPLRCLVVADNVWEKEVTARLRDTGMWVLVTTSREDAVRSVGGKPVRINRMFGADAELLLKRASGLPEGVGWQEGARDLVELCGRVALDVAYVGRWSTIREGNHATAWSRAADTIRFELQNPPLTWDTLSSDPSKDEPCVMKGNSGETVSLSLESEMELIKDDARATRRSAVLRAGFRALVDSSRGSRVQELFLSLAVMPDGHEFALGDAAILLGVRVGDDFPDEEEEVRAALHTLERCAIVTAREETYHMHDVHLGFAREVLAGRSDVRRLAVERWTSFISSLNTILTVDPHILAQLWSAVERVGGEGWRATRPYERALTRLDGADPRY-RAGIETVAKFRKVDGEWAGASAMWQHLLALEQQREEAPDVRYL------------LKELVEAAEKRGAGTEAMF------------------------------------GLRDIRQAERMLRRVLKAEKSCPKPDEVLVRQALFHLGLCLRQGRRL 2667
VP TP R+ W+V R+ VMD V L S P++VG+VG SGSGKT +A+E VRS +V E F+DG+ WLSV++GA RL SLML+LAR+V +I P T +D A+Y+R M G L+CLVVADNVWEKEV ++L +TGMWVL++T V G+ V ++ + ADA +L+RA+ LP A DL+ELCGRVA+D+A+VGRWST+R AWS A +R E+ V G++ E ++ + R RR A+LRAGF L S RVQ L+LSLAV PDGH F + DAA+LL R + ++E V + TLER ++ + + Y MHD H FARE L VRR AV+RW S IS L + + DP++L LW AVE VGG+GW +R Y AL +D R I +A+ ++ +W GAS W+ LL +E+++ A L L ++ EAA+ RG EA+ G D QAE +LRR L+ +++ +++ V L+ LG+CLR+ RL
Sbjct: 36 VPKGTPARKSWYVKRRHVMDTVFEGLA-SDGGPRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVNDGAKERLSSLMLQLARVVYEDIGCSVGRRP----------TSSDDCAAYIRQRM--KKGTGGKKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEMGK------------------VGSGDASEKLA------------ETRDARRKAILRAGFEDLAIGSDDERVQRLYLSLAVFPDGHAFTVRDAAVLLYDR--EPCAEDEASVAVVVDTLERWTVLRSEQGAYRMHDAHSIFARETLMDHGYVRRPAVKRWVSSISCLEVLRSSDPYVLKGLWLAVEGVGGDGWLKSRAYSAALVGMDRLHSALARQNIIALARLQEAHEDWEGASTTWRRLLEIEKKQLGADHYHVLKSYRSLASCAEQLGQVGEAADWRGKEVEALPLALARVQSQTDSGKVEGLDGANGLASVASTMLKFKPGSIDRAQAEVLLRRSLEIQEAALGHEDIAVADTLYQLGICLREAGRL 613
BLAST of mRNA_A-nodosum_M_contig1166.6.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE) HSP 1 Score: 328 bits (841), Expect = 5.000e-94 Identity = 207/500 (41.40%), Postives = 280/500 (56.00%), Query Frame = 1
Query: 934 RQATVPTLTPPRREWHVSRQRVMDMVSNNLFQSHEQPQVVGVVGESGSGKTIIAAEIVRSAQVLEFFADGVIWLSVDEGAASRLPSLMLELARMVRGEIVGGDSSTPAGASSKSSENTGVEDGASYVRDAMAGNFSAGRGPLRCLVVADNVWEKEVTARLRDTGMWVLVTTSREDAVRSVGGKPVRINRMFGADAELLLKRASGLPEGVGWQEGARDLVELCGRVALDVAYVGRWSTIREGNHATAWSRAADTIRFELQNPPLTWDTLSSDPSKDEPCVMKGNSGETVSLSLESEMELIKDDARATRRSAVLRAGFRALVDSSRGSRVQELFLSLAVMPDGHEFALGDAAILLGVRVGDDFPDEEEEVRAALHTLERCAIVTAR-EETYHMHDVHLGFAREVLAGRSDVRRLAVERWTSFISSLNTILTVDPHILAQLWSAVERVGGEGWRATRPYERALTRLDGADPRYRAGIETVAKFRKVDGEWAGASAMWQHLLAL 2430
++A VP TP R+ WHV R V + V L P++VG+VG+SG+GKT AAE+VRS V E F+DG++WL+V+ GA RLPSLML+LARMV+ +I G P +E+ G D +Y++ M N G+G L+CL VADNVWEKEV + L TGM VL++T E+ V G PVR++ + DAE +L+ A+ LP V + A DL++LCGRVA+D+A+VGRWST+R + AWS AA +R E+ E + I D AR RR A+L+AG L S RVQ L+LSLAV+PD + DAA+LL R D ++EE V L LER +++ + Y+MHDV FAR L R DVRR A+ RW +ISSL+T+ + + L W VE+VGGEGW T P E AL +D +P + I VAK + +W AS +W L +
Sbjct: 97 KKAYVPQGTPTRKSWHVER-HVTETVVEALT-GEAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKRLPSLMLQLARMVQEDIGGRVGGHP-------NESGGNAD--AYIKQRME-NGHGGKG-LKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKVRAEIAK---------------------------------IEGDDIVDGARGNRRKAILQAGLEDLAIGSDDERVQRLYLSLAVLPDDQGIQVHDAALLLYDR--DPTAEDEESVARVLDVLERWSVLRSTWAYKYYMHDVQSEFARASLMDRGDVRRHALRRWVGYISSLDTVRSYNADYLKHQWLDVEKVGGEGWDETHPCETALAEMDDPEPLLQESIAAVAKAHEAHEDWEKASTIWHRSLGV 548
BLAST of mRNA_A-nodosum_M_contig1166.6.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE) HSP 1 Score: 311 bits (798), Expect = 5.530e-85 Identity = 267/833 (32.05%), Postives = 387/833 (46.46%), Query Frame = 1
Query: 346 LRSKSPDAVPAVHEATRSLPDEVTDVLETLGDICESLGKVRYRKQELEALTYKITYVTACVIIKRQLAAXXXXXXXXXXXXXXXNTTAVTTAPAAWKNQEIDFAPLTECVEAVGKIVRRTRRRGRVSIMLTAASGGSKSRKRSITELHGRVDELTRELGLAGIVAVFKGVLLGAGSD---TAEVLSKDQ-----VLMAQQAQVS--------RQATVPTLTPPRREWHVSRQRVMDMVSNNLFQSHEQPQVVGVVGESGSGKTIIAAEIVRSAQVLEFFADGVIWLSVDEGAASRLPSLMLELARMVRGEIVGGDSSTPAGASSKSSENTGVEDGASYVRDAMAGNFSAGRGPLRCLVVADNVWEKEVTARLRDTGMWVLVTTSREDAVRSVGGKPVRINRMFGADAELLLKRASGLPEGVGWQEGARDLVELCGRVALDVAYVGRWSTIREGNHATAWSRAADTIRFELQNPPLTWDTLSSDPSKDEPCVMKGNSGETVSLSLESEMELIKDDARATRRSAVLRAGFRALVDSSRGSRVQELFLSLAVMPDGHEFALGDAAILLGVRVGDDFPDEEEEVRAA--LHTLER---------CAIVTAREETYHMHDVHLGFAREVLAGRSDVRRLAVERWTSFISSLNTILTVDPHILAQLWSAVERVGGEGWRATRPYERALTRLDGADPRYRAGIET-VAKFR----KVDGEWAGASAMWQHLLALEQQREEAPDVRYL------------LKELVEAAEKRGAGT---------------EAMFGLRDIRQAERMLRRVLKAEKSCPKPDEVLVRQALFHLGLCLRQGRRL 2667
+ ++S A V + + D + + D+CE L ++EL+ L + ++T CVI+K + ++ E+D +P+ EC+EA G++V R RG+++ +L A+S K I + + +L L LAG+ +L G SD T E ++K Q V++A ++ + A +P TP + WHV R V++ V L + P +VG+VG+SGSGKT A+EIVRS + RLPSLML+LA MV EI G +T +DG +Y+++ M + G L+CL V DNVWEKEV L + GMWVL++T E+ V G+ V +N + +AE +L++A+ LP + A DL+ELCGRVA+D+A+ GR ST+R + TAWS+AA +R E+ SK E ++G ET R RR AV++AGF L S RVQ L+LSLAV+PDG F + DAA+L + D P E+E AA + LER C + R Y +HD H FARE L R DV R A+ RWT ISS++T+ V H + LW E+VGG+GW+ TRPYE AL L+ +DP ++ V K R V ++H LE+ E + K L + R AG EA G R + + E +L R L+ ++ D V LF LG C+RQ R+
Sbjct: 1 MAAESSGAAAEVTKLALKMGSATVDSITFVADLCEDLPFEN--QEELQTLYRRCVFLTTCVIVKSRQSSF----------------------------SEMDVSPVEECLEAAGELVERCGGRGKMTRVLNASSD-----KDQIARMKANIRDLEANLSLAGVA-----ILEGKTSDLRATVERMAKIQAATQEVILANTEIITDRLSKTPAKPAKIPKSTPIWKSWHVERFDVVERVFEPLT-ADGGPPLVGLVGDSGSGKTTAASEIVRSNE-------------------DRLPSLMLQLAHMVYEEIGGRRPATS-------------DDGTAYIKERM--HRGHGGEGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSDRTAWSKAASKVRTEM--------------SKGECEGVRGTVVET----------------RDARRKAVVQAGFGDLAIGSDDERVQRLYLSLAVLPDGRRFTVKDAAVL----IYDRMPSAEDEASAAGVVEILERWSALCSIRGCYRMAWRGSHYVLHDAHSDFAREKLMDRGDVCRPALVRWTRNISSVDTLRAVRWHEVRDLWLGAEQVGGDGWKITRPYEAALAGLEDSDPHRPTLLDMPVTKVRPYSLSVIRSLHELGLGYKHAGCLEEAEEVLRGCLVIGGTLLGFTHVTVAKTLDLSGCVRAAGQFAQAXXXXXRCLATREAKLGPRGLVETEELLARRLEIVEASTALDHEHVADVLFDLGRCMRQAGRM 724
BLAST of mRNA_A-nodosum_M_contig1166.6.1 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE) HSP 1 Score: 266 bits (681), Expect = 3.570e-68 Identity = 224/696 (32.18%), Postives = 332/696 (47.70%), Query Frame = 1
Query: 601 TTAVTTAPAAWKNQEIDFAPLTECVEAVGKIVRRTRRRGRVSIMLTAASGGSKSRKRSITELHGRVDELTRELGLAGIVAVFKGVLLGAGSDTAEVLSKDQVLMAQQAQVSRQATVPTLTPPRREWHVSRQRVMDMVSNNLFQSHEQPQVVGVVGESGSGKTIIAAEIV--RSAQVLEFFADGVIWLSV--DEGAASRLPSLMLELARMVRGEIVGGDSSTPAGASSKSSENTGVEDGASYVRDAMAGNFSAGRGPLRCLVVADNVWEKEVTARLRDTGMWVLVTTSREDAVRSVGGKP---VRINRMFGADAELLLKRASGLPEGVGWQEGARDLVELCGRVALDVAYVGRWSTIREGNHATAWSRAADTIRFELQNPPLTWDTLSSDPSKDEPCVMKGNSGETVSLSLESEMELIKDDARATRRSAVLRAGFRALVDSSRGSRVQELFLSLAVMPDGHEFALGDAAILLGVRVGDDFPDEEEEVRAALHTLERCAIV-TAREETYHMHDVHLGFAREVLAGRSDVRRLAVERWTSFISSLNTILTVDPHILAQLWSAVERVGGEGWRATRPYERALTRLDGADPRYRAGIETVAKFRKVDGEWAGASAMWQHLLALEQQREEAPDVRYLLKELVEAAEKRGAGTEAMFGLRDIRQAERMLRRVLKAEKSCPKPDEVLVRQALFHLGLCLRQGRR 2664
T V A K ID PL ECV+ + ++ R RGR++ + G I L R++++ +GL+G+V + E L DQ+L Q + A VP P + +HV R V+D V + P + + G SG+GKT AA +V R +V F DGV+WL V + G A RLPSLM LA+ + +++ G P G +DG SYVR ++ + LRCLVVAD+VWE V +LR+TGMWVL+TT + G+P V ++ + A+AE +L+ A+ LP G + + ++E+CGRVA+D A+VG W+++R N ++A + EL T D + + V GN+GE D+ RA R AVLRAGF+ + QEL++ LAV P+G F DAA+LL + EE + + LER ++ T E Y HD H FAR+ L R+D+R AVERWT IS L+ + V+ +L +W A+E VGG+GW A RPY+ L ++ ++P +A + A+ ++ L A K G E M ++ E + RR L+ E++ PD++ V L LGLC+R+ R
Sbjct: 75 TIQVIDKAKASKTSTIDVKPLQECVDKLKEVAERYHDRGRLARLAQFRRDGE-----DIQRLRKRIEDVVPIMGLSGVV------------NNGEKL--DQILARLQPG-PKLAPVPKKAPFTKSFHVVRDGVVDRVCK-ILGGDGGPAMAALTGGSGAGKTTSAAAMVGERGDRVRALFPDGVVWLWVGREAGTADRLPSLMSNLAKRLHEDVMKGAVDAPTG-----------DDGVSYVRKIVS------QEKLRCLVVADDVWEASVVQKLRETGMWVLLTTRFPEM-----GEPEERVVMDTLIPAEAEDVLRGAAELPLGERLCDASMKVLEICGRVAMDTAFVGSWTSVRTTNGVPKSNKAWERTVEEL--------TAQIDHVRGQMKV--GNTGE--------------DNDRAINRLAVLRAGFKYI--GREDPLAQELYVKLAVFPEGFLFGESDAAVLL---------ENEEVAKGPISILERWGVLRTDASEKYRTHDAHADFARKKLMDRNDLREPAVERWTEHISRLDFAVGVEIFVLLPMWRALEEVGGKGWWALRPYDDQLIQMVTSNPAT---------------SYATSGAVG------------------VVMNLYRGARKLGELAEIM------KRVEPLFRRALEIEEATLGPDDIQVAVTLQELGLCMRETGR 653
BLAST of mRNA_A-nodosum_M_contig1166.6.1 vs. uniprot
Match: A0A6H5KE50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE50_9PHAE) HSP 1 Score: 248 bits (632), Expect = 2.860e-63 Identity = 194/636 (30.50%), Postives = 309/636 (48.58%), Query Frame = 1
Query: 601 TTAVTTAPAAWKNQEIDFAPLTECVEAVGKIVRRTRRRGRVSIMLTAASGGSKSRKRSITELHGRVDELTRELGLAGIVAVFKGVLLGAGSDTAEVLSKDQVLMAQQAQVSRQATVPTLTPPRREWHVSRQRVMDMVSNNLFQSHEQPQVVGVVGESGSGKTIIAAEIVRSAQV-------------------LEF----FADGVIWLSVD--EGAASRLPSLMLELARMVRGEIVGGDSSTPAGASSKSSENTGVEDGASYVRDAMAGNFSAGRGPLRCLVVADNVWEKEVTARLRDTGMWVLVTTSREDAVRSVGGKPVRINRMFGADAELLLKRASGLPEGVGWQEGARDLVE-LCGRVALDVAYVGRWSTIREGNHATAWSRAADTIRFELQNPPLTWDTLSSDPSKDEPCVMKGNSGETVSLSLESEMELIKDDARATRRSAVLRAGFRALVDSSRGSRVQELFLSLAVMPDGHEFALGDAAILLG-VRVGDDFPDEEEEVRAALHTLERCAIVTAREE-TYHMHDVHLGFAREVLAGRSDVRRLAVERWTSFISSLNTILTVDPHILAQLWSAVERVGGEGWRATRPYERALTRLDGADPRYRAGIETVAKFRKVDGEWAGASAMWQHLL 2424
T V A ID +PL CV+ + ++ +R +G ++ + G I L R++ + +GLAG+V + + D ++L++ Q + A VP P WH R V D V L S ++P V + G+SG+GK+ AA++VR+ +V LE F+DGV++L V EGAA RLP LM +LA+ + +++ + P E G SYV+ M R RCLVVAD+VWE V A+L++TGMWVL+TT + V G V ++++ A+AE +L+ A+ LP G + A +++ +CG VA+D+A+VG WS +R + + AW+ A I DT+ + + + + + D +R +LRAGF L + G+ Q+L++++AV PDG+ F + DAA+LL D P + A+ LER A++T Y MHD H+ FAR+ + + DVR+ V RWTS IS L+ + D + L+ +W AVE VGG+GW RPY++ L + G+D ++ VA+ + + + A + + +L
Sbjct: 153 TVQVIDKAKASNTSTIDVSPLQGCVDKLDEVAKRYHDQGCLARLAQFRRDGD-----DIQRLRARIEAIVPIMGLAGVVNIMDRL-----EDVRQILAR-----LQPRPRPKLAPVPPGLPAGEAWHAVRDHVEDEVYKIL--SGDEPAVAALTGKSGAGKSTAAADMVRNRKVDIRGLDDETEDQARTRMDRLERVRARFSDGVVYLRVGKGEGAADRLPDLMRKLAKALHEDVLKKTAGAPEAG----------EKGESYVKKMMT------RTKKRCLVVADDVWEPPVVAKLKETGMWVLLTTRFPEIVEPNEG--VDVDQLTPAEAEDVLRGAAELPRGQRLCDPAMQVLDDICGFVAMDIAFVGSWSMVRHTDDSGAWAEAVSKIN----------DTI---------------------VDVREDADGMNDSQ--VKRLGILRAGFDYLGEEE-GTLAQKLYVAIAVFPDGYAFGVSDAAVLLNDTHPPDPAPHHMKVASRAIEILERWAVLTMNASGKYRMHDTHMDFARDKIRDQGDVRKPVVRRWTSRISRLDFAVGRDVYALSDIWRAVEWVGGDGWFDLRPYDKELVSM-GSDCSKSHALDVVAELYEQEQKLAEMETLTREVL 718 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1166.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1166.6.1 >prot_A-nodosum_M_contig1166.6.1 ID=prot_A-nodosum_M_contig1166.6.1|Name=mRNA_A-nodosum_M_contig1166.6.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1017bp MDSLNDDLRVLAVEAATLVIALRSKSPDAVPAVHEATRSLPDEVTDVLETback to top mRNA from alignment at A-nodosum_M_contig1166:78148..96159- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1166.6.1 ID=mRNA_A-nodosum_M_contig1166.6.1|Name=mRNA_A-nodosum_M_contig1166.6.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=18012bp|location=Sequence derived from alignment at A-nodosum_M_contig1166:78148..96159- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1166:78148..96159- >mRNA_A-nodosum_M_contig1166.6.1 ID=mRNA_A-nodosum_M_contig1166.6.1|Name=mRNA_A-nodosum_M_contig1166.6.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=3051bp|location=Sequence derived from alignment at A-nodosum_M_contig1166:78148..96159- (Ascophyllum nodosum dioecious)back to top |