mRNA_A-nodosum_M_contig1165.7.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1165.7.1
Unique NamemRNA_A-nodosum_M_contig1165.7.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig1165.7.1 vs. uniprot
Match: D7FPJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPJ5_ECTSI)

HSP 1 Score: 537 bits (1383), Expect = 1.500e-186
Identity = 273/398 (68.59%), Postives = 324/398 (81.41%), Query Frame = 1
Query:    1 MADFYEVWRFRDSVLAKLEAMLKDQEAMGEQELKAATAIKRFYRAKIFRYYFCQKRKSIILIAKTFRGYRGRLRAQQALEKRHAKEAMAVYHHHALVIQGTFRGFHSRKYNFDYAGRKRYLQEVIDAGNAVRARLRRHEVQLLQEEAARTEQTQLAELQAIAQNLHHLVSTKTIRGVFNSPYARGSGRVRTIQGIAVEQHLTISAKDLLRSRGYLKRGLETDLNGQRRVPLRGLESRRSVQAQDHYDSHAQAVALDQAISRLKMIGPQEFHAGNRVHLSSYKRGINEGAPFIDPWRNPYMMRGVPRDQAEMSRPVNEITLGKYPEKPFYLSVGGNKSAVLPNGIFDVILDAEKTGGIVRTHNGRTRRFGVPDTCDVDDGVRVAPSSTLFFPPAPPGKR 1194
            MADFY VW  R SVL KL+AML  + A  +QEL+AAT IKR YR K  R    +KR ++I IA  +RGYRGR+R QQ LE+  A+E MAVYH+HAL IQG FRG+ SRKYN+++A RKRYLQEV+DAG+AVRA LR HE  LL+E AA  E    A+LQA AQNLHHLVSTK+I GVFNSPY R SGR+ TI+G+ VEQHLTISAKDLLR+RGY KRGLE DLNGQ+R+PL+GLESRRSVQAQD YD   +A  L+ A+SRLK +GP+EFHAGNRV L+ Y+RGI+ G  F+DPWRNP+++RGVPRDQAEM RP+NE TLGK+PEKPF++SVGGNKS VLPNGIFDVIL+AE+TGG+VRT NGRTRRFG+PDTCDV+D V   P STLFFPP+PP +R
Sbjct:    1 MADFYGVWSCRASVLRKLDAMLDARNAARQQELQAATDIKRVYRGKTVRNDLNRKRAAMIRIASAYRGYRGRVRTQQILEEMLARERMAVYHYHALEIQGAFRGYQSRKYNYNHARRKRYLQEVVDAGDAVRAELREHEQALLEERAANKEVADQAKLQATAQNLHHLVSTKSISGVFNSPYMRNSGRMPTIRGVEVEQHLTISAKDLLRTRGYTKRGLEVDLNGQQRIPLKGLESRRSVQAQDPYDLPKKAADLEDALSRLKRVGPREFHAGNRVALAPYQRGISGGTQFLDPWRNPFLVRGVPRDQAEMQRPLNETTLGKFPEKPFHVSVGGNKSTVLPNGIFDVILEAEQTGGVVRTQNGRTRRFGIPDTCDVNDDV--VPGSTLFFPPSPPKQR 396          
BLAST of mRNA_A-nodosum_M_contig1165.7.1 vs. uniprot
Match: A0A7S2G8K6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G8K6_9STRA)

HSP 1 Score: 312 bits (800), Expect = 1.430e-98
Identity = 166/384 (43.23%), Postives = 234/384 (60.94%), Query Frame = 1
Query:    1 MADFYEVWRFRDSVLAKLEAMLKDQEAMGEQELKAATAIKRFYRAKIFRYYFCQKRKSIILIAKTFRGYRGRLRAQQALEKRHAKEAMAVYHHHALVIQGTFRGFHSRKYNFDYAGRKRYLQEVIDAGNAVRARLRRHEVQLLQEEAARTEQTQLAELQAIAQNLHHLVSTKTIRGVFNSPYARGSGRVRTIQGIAVEQHLTISAKDLLRSRGYLKRGLETDLNGQRRVPLRGLESRRSVQAQDHYDSHAQAVALDQAISRLKMIGPQEFHAGNRVHLSSYKRGINEGAPFIDPWRNPYMMRGVPRDQAEMSRPVNEITLGKYPEKPFYLSVGGNKSAVLPNGIFDVILDAEKTGGIVRTHNGRTRRFGVPDTCDVDDGVRVAP 1152
            MAD+Y +W+ R  V  +L  +LKD       E  +AT I+R +R +  R +  + R + I I + +RG+  RL A  A +     E  A++H+H +++Q  FRG++SR+Y  DY+ RK+Y+  +       RA L  H   L+  +  R       E +A+ QNLHHLVST  I G++N+PY        T  G+ +E HL    K+LLR+RGY KRGL TD+NG RRVP+R  +SR SVQA   YD   +A  ++  + ++  IG ++F AG  VH + Y+RG+N+G+ + DPWRNPYM+RG+P+ QAE+S+     +LGK P   F+ SVGGNKSAVLPN  FDV+LDAE +GG+   H G T RFGV DTCDV D   + P
Sbjct:   17 MADWYGLWKGRALVTDELVTLLKDASDAAALEYDSATRIQRLFRGQFIRAWVEEMRVASIGIERVYRGHAARLIADAAAKDSTLFEEAAIFHYHCIMVQRAFRGYYSRRYYHDYSARKKYIDSIKSKNEDRRATLSAHREALVAADQERAAVAAKEEFEAVTQNLHHLVSTAHIAGIYNTPYMTEQP---TAMGLPLEHHLRTGVKNLLRTRGYQKRGLVTDINGSRRVPVRPAQSRLSVQASSQYDVPLEAARMEAKLDKMSHIGGRDFTAGQAVHQAPYRRGLNDGSQYTDPWRNPYMIRGIPKSQAELSQ--GRTSLGKAPAVHFHTSVGGNKSAVLPNDRFDVMLDAESSGGVHLRHKGTTNRFGVSDTCDVRDEDEMFP 395          
BLAST of mRNA_A-nodosum_M_contig1165.7.1 vs. uniprot
Match: A0A835YV60_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV60_9STRA)

HSP 1 Score: 291 bits (744), Expect = 1.390e-89
Identity = 160/385 (41.56%), Postives = 234/385 (60.78%), Query Frame = 1
Query:    1 MADFYEVWRFRDSVLAKLEAMLKDQEAMGEQELKAATAIKRFYRAKIFRYYFCQKRKSIILIAKTFRGYRGRLRAQQALEKRHAKEAMAVYHHHALVIQGTFRGFHSRKYNFDYAGRKRYLQEVIDAGNAVRARLRRHEVQLLQEEAARTEQTQLAELQAIAQNLHHLVSTKTIRGVFNSPYARGSGRVRTIQGIAVEQHLTISAKDLLRSRGYLKRGLETDLNGQRRVPLRGLESRRSVQAQDHYDSHAQAVALDQAISRLKMIGPQEFHAGNRVHLSSYKRGINEGAPFIDPWRNPYMMRGVPRDQAEMSRPVNE--ITLGKYPEKPFYLSVGGNKSAVLPNGIFDVILDAEKTGGIVRTHNGRTRRFGVPDTCDVDDGVRVA 1149
            MADF  +++ R +++ +     ++++A   QE  AA +++R +R K  R       +++             +RA   +  R   E  AV+H+HA  IQ   RGF SR+  + +A R+ YL E++  G A+RA L  HE Q+ QE+  R  Q + A +Q +++NLHHLVSTK   GVF+SPY   +  + TI G+ +++HLT S +DLLR RGY K  LE D+ G  R+P      RRS+QA   YD  +Q  A++    RLK++GP+ F AG RV   +Y+RG++EG  F++ W+NPY+ RGVPR   ++  P  +   +LG+ P +PF+ +VGGN+SAVLPNG FDVI +A+++GG      GRTRRFGVPDTCDV  G R A
Sbjct:    1 MADFMAIYKGRAALVDEARRRQQERDAAAPQERNAAVSVQRIFRGKRVRDRHKVLNEAVTKXXXXXXXXXXXVRAAALMVARREAELQAVFHYHARSIQRLIRGFVSRRTRYCHAKRRAYLAELVQVGEALRATLLAHEEQMKQEQDQRALQQRQARVQQLSENLHHLVSTKAQPGVFSSPYLHPT-ELPTIDGVPIDEHLTRSIRDLLRKRGYQKLALEPDITGVMRMPQAAPGDRRSLQASQPYDLPSQLAAVEAVQHRLKLLGPRHFAAGERVRTPAYQRGVSEGTQFLEHWQNPYLSRGVPRSPEDLRSPPGKEGSSLGRAPARPFFTAVGGNRSAVLPNGRFDVIAEAQRSGGAAGRPFGRTRRFGVPDTCDVGGGRREA 384          
BLAST of mRNA_A-nodosum_M_contig1165.7.1 vs. uniprot
Match: A0A7S2W8X7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8X7_9STRA)

HSP 1 Score: 253 bits (646), Expect = 7.310e-76
Identity = 137/330 (41.52%), Postives = 197/330 (59.70%), Query Frame = 1
Query:  214 RLRAQQALEKRHAKEAMAVYHHHALVIQGTFRGFHSRKYNFDYAGRKRYLQEVIDAGNAVRARLRRHEVQLLQEEAARTEQTQLAELQAIAQNLHHLVSTKTIRGVFNSPYARGSGRVRTIQGIAVEQHLTISAKDLLR-------SRGYLKRGLETDLNGQRRVPLRGLESRRSVQAQDHYDSHAQAVALDQAISRLKMIGPQEFHAGNRVHLSSYKRGINEGAPFIDPWRNPYMMRGVPRDQAEMSRPVNEITLGKYPEKPFYLSVGGNKSAVLPNGIFDVILDAEKTGGIVRTHNGRTRRFGVPDTCDVDDGVRVAPSSTLFFPPAP 1182
            RL A     ++  ++ +A++H+HA+ +Q TFRGF+SR++  DY+ RK+YL+ V   G+A+R  LR++    ++EE  R    Q  E Q   + LHHLVST    GVFNSP+A     V  ++G+ +E HL   AK  +R       SR   K  L   ++G R VPL     R S+QA   YD       +D+ +++L  +G ++F    R   ++Y+RGINEG  ++DPW+NPY++RGVP+ QAE+S+  +  T+GK P   FY SVGGNKS VLPNG+FDV+LDAE +GG+ + H   T RFGVPD CD+ +           FPP P
Sbjct:   57 RLAAGLRRRRQEDEQELAIFHYHAIALQRTFRGFYSRRHYHDYSARKKYLETVRAKGDALRETLRQYREAQIEEEDERLRNEQAQEFQEATERLHHLVSTSATAGVFNSPFAP---EVPAVEGVPLETHLRAGAKAYVRRTGLQASSRRRQKADLSMRMSGSRNVPLPQPTKRISLQASVPYDVERDQEQMDRRLTKLGFVGGKDFTVSQRAKEATYRRGINEGCQYMDPWQNPYLVRGVPQSQAELSQ--SRTTIGKAPAVHFYTSVGGNKSTVLPNGLFDVMLDAEYSGGVCQRHKANTVRFGVPDNCDIRE-------EEALFPPIP 374          
BLAST of mRNA_A-nodosum_M_contig1165.7.1 vs. uniprot
Match: A0A7S2G0C8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G0C8_9STRA)

HSP 1 Score: 246 bits (627), Expect = 1.020e-73
Identity = 126/281 (44.84%), Postives = 186/281 (66.19%), Query Frame = 1
Query:  289 VIQGTFRGFHSRKYNFDYAGRKRYLQEVIDAGNAVRARLRRHEVQLLQEEAARTEQTQLAELQAIAQNLHHLVSTKTIRGVFNSPYARGSGRVRTIQGIAVEQHLTISAKDLLRSRGYLKRGLETDLNGQRRVPLRGLESRRSVQAQDHYDSHAQAVALDQAISRLKMIGPQE-FHAGNRVHLSSYKRGINEGAPFIDPWRNPYMMRGVPRDQAEMSRPVNEITLGKYPEKPFYLSVGGNKSAVLPNGIFDVILDAEKTGGIVRTHNGRTRRFGVPDTCDV 1128
            ++Q ++RG++SR Y  +++ RK+YL  + + G A+RARL +H+  L++ +A   EQ    E + + +NLHHLVSTK+I GV+ SPY        T  G  +E+HL    K +L++RGY KRGL  ++ G R VP++   S+RS+QA  HYD+  +A  L++  +++  +   + F AG++V L +++RG+NEG+ + DPW+NPY+ RGVP  +A++   +   TLGK P   FY +VGGNKSA LPNG FD ILDAE TGG+   H  R+ RFGVPDTCDV
Sbjct:    1 MLQRSYRGYYSRLYKHNFSARKQYLDSIAEKGVALRARLAKHQEALIRADAEAAEQKAQDEFKMVTENLHHLVSTKSIPGVYKSPYLDEP----TAMGRPLEEHLRTGVKAVLQTRGYTKRGLTRNIGGGRVVPIKAPVSKRSLQATSHYDAVTEAERLEKRRTKIGFMDKTKGFEAGHKVPLPAHRRGLNEGSAYQDPWKNPYLTRGVPEPKADLQ--MGRSTLGKAPAVHFYTAVGGNKSAALPNGTFDAILDAEHTGGVHLRHKHRSLRFGVPDTCDV 275          
BLAST of mRNA_A-nodosum_M_contig1165.7.1 vs. uniprot
Match: A0A7S3M3D7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M3D7_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.510e-53
Identity = 126/382 (32.98%), Postives = 201/382 (52.62%), Query Frame = 1
Query:    1 MADFYEVWRFRDSVLAKLEAMLKDQEAMGEQELKAATAIKRFYRAKIFRYYFCQKRKSIILIAKTFRGYRGRLRAQQALEKRHAKEAMAVYHHHALVIQGTFRGFHSRKYNFDYAGRKRYLQEVIDAGNAVRARLRRHEVQLLQEEAARTEQTQLAELQAIAQNLHHLVSTKTIRGVFNS-PYARGSGRVRTIQGIAVEQHLTISAKDLLRSRGYLKRGLETDLNGQRRVPLRGLESRRSVQAQDHYDSHAQAVALDQAISRLKMIGPQEFHAGNRVHLSSYKR-GINEGAPFIDPWRNPYMMRGVPRDQAEM---SRPVNEITLGKYPE--KPFYLSVGGNKSAVLPNGIFDVILDAEKTGGIVRTHNGRTRRFGVPDTCD 1125
            M D+Y++   ++  + K    LK  E     +  AA +I+R YR    R    +K      I        GR  A+  L++      ++++++  + +Q  FRG++SRKY  D   RK Y + + + G  VR  L+++   L + E A  EQ +  E   +AQNLHHLVSTK I G++   PY   +    T++ + +E+H+    KDLLR+RG    G+ TDLNG +++PL+GL+ R SVQA   YD+  Q       + ++       F AG + +L +     ++ G P++DPW NP +++GVP+DQ ++   +R    +    +    +PF    GGNKS VL N +FD I +AE+TGG ++   G T RFG+    D
Sbjct:    1 MVDYYKLLESKNDFMQKFWTTLKIAEENSGIDNSAALSIQRVYRGTTSRERIAKKSYKANEIXXXXXXLLGRNIARNKLKELDESRQLSLFNYLCIQLQKCFRGYYSRKYKHDQHRRKEYCKMLEEQGEQVRQNLQKYAEDLAEREEAEKEQKKDEEFTRLAQNLHHLVSTKRIPGIYKPLPYYNNAP---TMKAMPIEEHVRGVVKDLLRTRGIAHTGMVTDLNGTKKIPLKGLKYRLSVQASAPYDAVEQDNKRKAMLHKIITADKGSFAAGGKTNLINQPTVPLSVGNPYMDPWANPMLVKGVPKDQKQLEESNRTFKPLFTAPFTALTQPFLPRAGGNKSTVLANDVFDTIAEAEETGGAIQRFRGTTGRFGLSTNMD 379          
BLAST of mRNA_A-nodosum_M_contig1165.7.1 vs. uniprot
Match: A0A8K1FM83_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FM83_PYTOL)

HSP 1 Score: 189 bits (481), Expect = 4.800e-52
Identity = 123/354 (34.75%), Postives = 197/354 (55.65%), Query Frame = 1
Query:    1 MADFYEVWRFRDSVLAKLEAMLKDQEAMGEQELKAATAIKRFYRAKIFRYYFCQKRKSIILIAKTFRGYRGRLRAQQALEKRHAKEAMAVYHHHALVIQGTFRGFHSRKYNFDYAGRKRYLQEVIDAGNAVRARLRRHEVQLLQEEAARTEQTQLAELQAIAQNLHHLVSTKTIRGVFNSPYARGSGRVRTIQGIAVEQHLTISAKDLLRSRGYLKRGLETDLNGQRRVPLRGLESRRSVQAQDHYDSHAQAVALDQAISRLKMIGPQEFHAGNRVHLSSYKR----GINEGAPFIDPWRNPYMMRGVPRDQAEMSRPVNEITLGKYP---EKPFYLSVGGNKSAVLPNGIFDV 1041
            MA F++ W+ R S L +L+ +L+D +    +E  AA  I+R +R +  R     +R + I++A+ +RG+  R R ++  E+    +  AV+H++A++IQ   RG HSR+   D+  RK Y++E+   G+A+R +L  +  +  QEE    ++    EL  ++QNLHHLVST+ I GV+NSP    +    T  GI VE H+  + K L+ ++      L T     + +P     ++ S+QA   YD+  +AV   +   +L+ I  Q+F A +  +  + K+    GIN G  ++D W+NPY  RG+PR + ++   +   TLGK P   EKPFYL+ GGNKS V  N  FDV
Sbjct:    1 MALFHQCWQQRRSTLDRLQWLLEDAQTNQARERTAAIHIQRLFRGQRVRATITTQRNAEIVLARVYRGHLARRRCRRLREQEQLWQQHAVFHYYAIIIQKVLRGVHSRRTKLDFRVRKAYIREIAAKGDAMRQQLEENLRRQQQEERQANDEAARHELAQVSQNLHHLVSTRAIAGVYNSPMLASTA---TAFGIPVETHIRENTKTLISTQ------LTTATAPTKLIPYPP-SNKASLQAAAPYDAPLRAVRTQKKYHKLRRISAQDFQAVHNSNQDTLKKLAAPGINAGVEYLDDWKNPYKKRGIPRAKEDLLPQLT--TLGKPPKEKEKPFYLTSGGNKSKVYANDRFDV 342          
BLAST of mRNA_A-nodosum_M_contig1165.7.1 vs. uniprot
Match: D0NLE6_PHYIT (Uncharacterized protein n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NLE6_PHYIT)

HSP 1 Score: 179 bits (453), Expect = 5.140e-48
Identity = 126/354 (35.59%), Postives = 189/354 (53.39%), Query Frame = 1
Query:    1 MADFYEVWRFRDSVLAKLEAMLKDQEAMGEQELKAATAIKRFYRAKIFRYYFCQKRKSIILIAKTFRGYRGRLRAQQA---LEKRHAKEAMAVYHHHALVIQGTFRGFHSRKYNFDYAGRKRYLQEVIDAGNAVRARLRRHEVQLLQEEAARTEQTQLAELQAIAQNLHHLVSTKTIRGVFNSPYARGSGRVRTIQGIAVEQHLTISAKDLLRSRGYLKRGLETDLNGQRRVPLRGLESRRSVQAQDHYDSHAQAVALDQAISRLKMIGPQEFHAG-NRVHLSSYKRG---INEGAPFIDPWRNPYMMRGVPRDQAEMSRPVNEITLGKYPEKPFYLSVGGNKSAVLPNGIFDV 1041
            MA F++ W  R + L +L+ +L D EA  E E KAAT I+R +R +  R     +  + +LI++ FRG+  R R  Q    LE+ H +  +  Y   A+VIQ   RG  SR    D+  RK Y+ E+   G+ +R  L  + ++  ++E   T++   AEL  + Q+LHHLVST+ + G+FNSP    S    T  G++VE H+  +A+ ++ SR      L       R  P    + + ++Q+   YD+  Q         +L+ IG  +F A  N     + KR    IN G  ++D WRNPY  RGVPR++ ++   ++  TLG+YPE PFYL+ GGNKS VL N  FDV
Sbjct:    1 MALFHDCWTSRGAALVRLQQLLDDAEAQAETERKAATHIQRLFRGQRVRAAVTAQTDAELLISRVFRGHLARRRCNQLRTDLERAHRRSVLDYY---AVVIQKLARGVQSRTLRLDFRKRKAYVLELAAKGDLMRQMLEENLLKQQEQEKLDTKKAARAELVKVTQDLHHLVSTRAVAGIFNSPMQAASV---TSFGVSVESHIRENARRVVTSR------LAKARPPSRLTPYPPSD-KTTLQSSGPYDAVQQEKRKQTKYHKLRRIGSSDFAAVYNPEQDVARKRNAPSINSGTDYVDEWRNPYKKRGVPRNKRDLLPQLS--TLGRYPETPFYLTYGGNKSKVLANDRFDV 339          
BLAST of mRNA_A-nodosum_M_contig1165.7.1 vs. uniprot
Match: G4ZSU5_PHYSP (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=G4ZSU5_PHYSP)

HSP 1 Score: 175 bits (444), Expect = 1.030e-46
Identity = 122/357 (34.17%), Postives = 190/357 (53.22%), Query Frame = 1
Query:    1 MADFYEVWRFRDSVLAKLEAMLKDQEAMGEQELKAATAIKRFYRAKIFRYYFCQKRKSIILIAKTFRGYRGRLRAQQALEKRHAKEAMAVYHHHALVIQGTFRGFHSRKYNFDYAGRKRYLQEVIDAGNAVRA------RLRRHEVQLLQEEAARTEQTQLAELQAIAQNLHHLVSTKTIRGVFNSPYARGSGRVRTIQGIAVEQHLTISAKDLLRSRGYLKRGLETDLNGQRRVPLRGLESRRSVQAQDHYDSHAQAVALDQAISRLKMIGPQEFHAGNRVHLSSYKR----GINEGAPFIDPWRNPYMMRGVPRDQAEMSRPVNEITLGKYPEKPFYLSVGGNKSAVLPNGIFDV 1041
            MA F + W+ R + L +L+ +L D E   E E KAAT I+R +R +  R    ++  + ++I++ +RG+ GR R ++   + H     AV  ++A+VIQ   RG  SR++  D+  RK Y+ E+   G+++R       R+++   QL  E+AAR E      L  + Q+LHHLVSTK + G++NSP    S    T  G+ VE H+  +A+ ++ +R      L T     R  P     ++ ++QA   YD+  +         +L+ IG  +F A         ++    GIN G  ++D WRNPY  RGVPR++ ++   ++  TLG  PE PFYL+ GGNKS VL N  FDV
Sbjct:    1 MALFSDCWKSRGATLERLQQLLDDAEDQAETERKAATHIQRLFRGQRVRAAVTRQTDAELMISRVYRGHLGRRRCKRLRAELHRAHRRAVLDYYAVVIQKLARGIQSREHCLDFRKRKAYISELAAKGDSMRRMLEENLRIQQEREQLASEQAAREE------LVKVTQDLHHLVSTKAVAGIYNSPMQPASA---TSFGVPVETHIRENARRVVSTR------LATARPPSRLTPYPP-SNKVTLQATAPYDAVQRETRKQTKYHKLRRIGTTDFAAVYNPEQDVARKLNAPGINAGIEYLDDWRNPYKKRGVPRNKRDLLPQLS--TLGHAPETPFYLTYGGNKSKVLANDRFDV 339          
BLAST of mRNA_A-nodosum_M_contig1165.7.1 vs. uniprot
Match: A0A225V6Q5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V6Q5_9STRA)

HSP 1 Score: 173 bits (438), Expect = 7.550e-46
Identity = 118/351 (33.62%), Postives = 183/351 (52.14%), Query Frame = 1
Query:    1 MADFYEVWRFRDSVLAKLEAMLKDQEAMGEQELKAATAIKRFYRAKIFRYYFCQKRKSIILIAKTFRGYRGRLRAQQALEKRHAKEAMAVYHHHALVIQGTFRGFHSRKYNFDYAGRKRYLQEVIDAGNAVRARLRRHEVQLLQEEAARTEQTQLAELQAIAQNLHHLVSTKTIRGVFNSPYARGSGRVRTIQGIAVEQHLTISAKDLLRSRGYLKRGLETDLNGQRRVPLRGLESRRSVQAQDHYDSHAQAVALDQAISRLKMIGPQEFHAG-NRVHLSSYKR---GINEGAPFIDPWRNPYMMRGVPRDQAEMSRPVNEITLGKYPEKPFYLSVGGNKSAVLPNGIFDV 1041
            MA FY+ W+ R  VL +L+ +L D E   E E KAAT I+R +R +  R     K  + ++I++ FRG+  RLR  +        +  AV   +A  IQ   RG  SR +  D+  RK Y+ E+   G+ +R  L  +  +  ++E   +E+    EL  + Q+LHHL+ST+ + G++NSP    S    T  G+ VE H+  +A+ ++ +R    R   T       +       + ++QA   YD+  +         +L+ IG  +F A  N    ++ KR   GIN G  ++D WRNPY  RGVPR++ ++   ++  TLG++P  PFYL+ GGNKS VL N  FDV
Sbjct:    1 MALFYDCWKNRGEVLDRLQQLLDDAEIQAEPERKAATHIQRLFRGQRVRATITNKTNAELMISRVFRGHLARLRCNRLRLDVEQSQRQAVLDFYASTIQKIIRGGQSRTHRLDFRTRKAYIGELAAKGDRMRQMLEENLRKQQEQEQIDSEKAAREELVNVTQDLHHLMSTQVVAGIYNSPMQPASA---TSFGVPVETHIRENARRIVSARLSAARTPST-------LAPYPPSDKSTLQAAAPYDAVQRETRKQTKYHKLRRIGTSDFAAVYNPAQDNTRKRNASGINAGVEYVDEWRNPYKKRGVPRNKRDLLPQLS--TLGRHPATPFYLTFGGNKSKVLANDRFDV 339          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1165.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPJ5_ECTSI1.500e-18668.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2G8K6_9STRA1.430e-9843.23Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A835YV60_9STRA1.390e-8941.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2W8X7_9STRA7.310e-7641.52Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2G0C8_9STRA1.020e-7344.84Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3M3D7_9STRA1.510e-5332.98Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A8K1FM83_PYTOL4.800e-5234.75Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0NLE6_PHYIT5.140e-4835.59Uncharacterized protein n=3 Tax=Phytophthora infes... [more]
G4ZSU5_PHYSP1.030e-4634.17Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]
A0A225V6Q5_9STRA7.550e-4633.62Uncharacterized protein n=1 Tax=Phytophthora megak... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1165contigA-nodosum_M_contig1165:81236..85472 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FPJ5
Preferred nameSPATA17
PFAMsIQ
Model size1563
Max annot lvl2759|Eukaryota
KEGG koko:K08515
KEGG Pathwayko04130,map04130
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0008092,GO:0017022,GO:0032027
Exons9
Evalue3.37e-189
EggNOG OGs2CGXK@1|root,2QS0S@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-12_000820.1
Descriptionmyosin light chain binding
Cds size1218
COG categoryS
BRITEko00000,ko00001,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1165.7.1prot_A-nodosum_M_contig1165.7.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1165 81236..85127 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866570.4962788-CDS-A-nodosum_M_contig1165:81235..813731680866570.4962788-CDS-A-nodosum_M_contig1165:81235..81373Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1165 81236..81373 +
1680866570.5106275-CDS-A-nodosum_M_contig1165:81678..817941680866570.5106275-CDS-A-nodosum_M_contig1165:81678..81794Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1165 81679..81794 +
1680866570.520084-CDS-A-nodosum_M_contig1165:82053..821681680866570.520084-CDS-A-nodosum_M_contig1165:82053..82168Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1165 82054..82168 +
1680866570.5318182-CDS-A-nodosum_M_contig1165:82366..824741680866570.5318182-CDS-A-nodosum_M_contig1165:82366..82474Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1165 82367..82474 +
1680866570.5433323-CDS-A-nodosum_M_contig1165:82676..828281680866570.5433323-CDS-A-nodosum_M_contig1165:82676..82828Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1165 82677..82828 +
1680866570.5514343-CDS-A-nodosum_M_contig1165:83008..831711680866570.5514343-CDS-A-nodosum_M_contig1165:83008..83171Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1165 83009..83171 +
1680866570.5594363-CDS-A-nodosum_M_contig1165:83923..840821680866570.5594363-CDS-A-nodosum_M_contig1165:83923..84082Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1165 83924..84082 +
1680866570.5676372-CDS-A-nodosum_M_contig1165:84528..846771680866570.5676372-CDS-A-nodosum_M_contig1165:84528..84677Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1165 84529..84677 +
1680866570.576187-CDS-A-nodosum_M_contig1165:85009..851271680866570.576187-CDS-A-nodosum_M_contig1165:85009..85127Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1165 85010..85127 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866570.5858743-UTR-A-nodosum_M_contig1165:85127..854721680866570.5858743-UTR-A-nodosum_M_contig1165:85127..85472Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1165 85128..85472 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1165.7.1

>prot_A-nodosum_M_contig1165.7.1 ID=prot_A-nodosum_M_contig1165.7.1|Name=mRNA_A-nodosum_M_contig1165.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=406bp
MADFYEVWRFRDSVLAKLEAMLKDQEAMGEQELKAATAIKRFYRAKIFRY
YFCQKRKSIILIAKTFRGYRGRLRAQQALEKRHAKEAMAVYHHHALVIQG
TFRGFHSRKYNFDYAGRKRYLQEVIDAGNAVRARLRRHEVQLLQEEAART
EQTQLAELQAIAQNLHHLVSTKTIRGVFNSPYARGSGRVRTIQGIAVEQH
LTISAKDLLRSRGYLKRGLETDLNGQRRVPLRGLESRRSVQAQDHYDSHA
QAVALDQAISRLKMIGPQEFHAGNRVHLSSYKRGINEGAPFIDPWRNPYM
MRGVPRDQAEMSRPVNEITLGKYPEKPFYLSVGGNKSAVLPNGIFDVILD
AEKTGGIVRTHNGRTRRFGVPDTCDVDDGVRVAPSSTLFFPPAPPGKRLQ
PAGTR*
back to top

mRNA from alignment at A-nodosum_M_contig1165:81236..85472+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1165.7.1 ID=mRNA_A-nodosum_M_contig1165.7.1|Name=mRNA_A-nodosum_M_contig1165.7.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4237bp|location=Sequence derived from alignment at A-nodosum_M_contig1165:81236..85472+ (Ascophyllum nodosum dioecious)
ATGGCGGACTTTTATGAAGTATGGCGATTTCGGGACTCTGTGCTTGCAAA GTTGGAAGCCATGCTCAAGGATCAGGAGGCGATGGGGGAGCAGGAGCTCA AGGCAGCGACAGCCATCAAGCGATTTTATCGAGCGAAGGTGGGACCGACG TGGATCACGAGGCTTCTACTACAATAGTTATACCCTATAGGTTTGTATTT CGTGGCAGTACCCTTGACCTACTGGCAGTCTTGTTGGAAACTTACTACGT TGTTGGGAGGATGATAGTTGTGACATCAAACCGATGGCAAACTCGATTTG CTTCAGAATATTGCTACATGCAATCGACGCGTAGGGATCCGTCGTCCGAT TCCCCCCACGCATACCACAGTCGCCATGTTGGGATTCAGAGTGTTTTACT TCATGAACCCTGCCAAATTATTCTGTGCGGCGCTGCGAATCAGATCTTTC GATACTACTTCTGCCAAAAGAGGAAATCAATAATTCTGATAGCCAAAACT TTTCGAGGTTACCGAGGCCGCCTGCGCGCCCAACAGGCGCTCGAGAAGCG TCACGCGAAGTGAGTTGTAAGGACTCTACGTGACCACGAACTATGGATAG AGGACTATATGCGACGAAGACGCGAACTGCCTACCTGCCTCTCGAACCTC GAAAGCTGTGCTGGGTCTGTATGTCTAAGAGTCTGACTACTCGATGTGAG CACTCCTCGAAAATATCGAACCGTGCTGACCTTTTCTTGGTTTTCCTGGA ACGCGCCCAACTGACGTGCTCTGTATATATATATATACGCACTGAAACAT GGTGTCGCAACATCAAAGGGAGGCGATGGCGGTGTACCACCACCACGCAC TAGTAATACAGGGGACGTTTAGAGGATTCCACAGCCGAAAATATAACTTC GACTACGCCGGGAGGAAACGATATCTTCAAGAGGTGACCAAAACAGAAAC TTGGTGAGCTATTTCGATGCTGTCTGGTGCGGAGCGCGTCTGGTATGTAT GCATACTTGTATGTCAATGTTGGACATGGATGGGAGGGATTGCGTTACCT CGTAGCCCTTGTAGAGAGAGTAAGAACGAGGTGTGCCATAATTATGATGC GTAACGCTTCGACCAATGTCCAATCTATTAGGTGATCGACGCAGGCAATG CGGTTCGCGCGAGGCTCCGGCGGCACGAGGTACAGCTCCTGCAAGAAGAA GCCGCCAGAACTGAACAGACCCAACTAGCCGAGCTGCAGGTACCTCTCAC CACACGGCCCGTCCTTTTCTCGTTATTACTGGTTGTATCTCGGCTCCGGC GATCCACTCAAGGGGACAAATGCCGGAGGAATATATCGTGAGATTATACT CACGGTGTTGCGTTCGTGGTTCAAAGCCGCGTCTCCTTCTTCTTGACTTC CACTTTTATGACCATGAACGGACGTCCGCGGACATTCTCAGGCGATTGCC CAAAATCTGCACCATCTTGTCAGCACGAAGACCATAAGAGGGGTATTCAA CTCGCCCTACGCAAGGGGTTCCGGCCGCGTCCGGACCATCCAAGGGATAG CGGTGGAGCAACATCTCACCATCAGCGCCAAGGACTTGCTGCGGTGAGCT ACGTTGTCTGACGATTCACGTGATAAAATAGCGATAAACAGGTGGAGCGC GTGGCACTGGCTTTTCCCGGTAAGGTTTAGTCTATGGTTATTGTCACTCA CACACTAATCCCATGGACCTGTCACTCTTTCCACTTTTCCCACTCCCGTC CCGATCTCAATGGCGTGGGGAAGATCTCGCGGGTACTTGAAGCGCGGCCT TGAAACGGATCTTAATGGCCAGCGGCGGGTCCCCCTGAGAGGGCTTGAGA GTCGACGAAGCGTGCAGGCGCAGGATCACTACGATTCACACGCGCAGGCG GTTGCGCTTGACCAAGCCATTTCGCGTCTTAAGATGGTAGGCCAGTGAAA TACACAAAATGATTAGGAAGTAGTATTGTGTTTCGTGACGATGTTTTAAT GCAATATCGTCCGATGCGATGTATCTTATCTTCTGTCGTCTGGTGGTAGA AGTGGTGCGACGTCGAGATGTACCCCACGTCGCGATATATCGCCTCCCAA AAAACGCATCCTGGTGAAATCCCTTCACCAGGTTAATATTGCTCGCGCGC TTCGCGCGCTCGCTGCTTTATAAAGTACATTTTATCGACAGTTTGTTAGG GTATGTATGTATGGTTCTCACGTATATCAGAGTATAGATTAACCGGGTAA GTTAAGGTTGCCAATCCTGTTGGTGACCAGCTAAACAGGAAAAATGAATA TTTCCCTATCCCCTTTCGGGAGAAAAACTCCCATAGAGGATAACTAATAC CGTAGCGTCGCGGGCTCTCATGCCCGAGGGGCATTTTTCGTGGACCGTCT GCGCAAAATCGATTACACCATGAAACTAATTTTTTTACGATGGGAGACAG TGACGTCATGATTCATATAAAAGGCGAAAATTCTTTTGATTTTTACTTTG TCCTCTAGACAGTGGTGGATAGTATCGGCGAACCTCTACAACTAACCCCA CTTTGCTGCGAGATGACCTGGGCTATGAGCGTGACCTCGCCATGGGTATC GAAACTTCATCACCGGTAGTTTTCTATCCCCACTATTCCTCAAATGTGCA ACGACTTCCACATTTTGAATTTTGTCGTCTCACGGAAGATCGGCCCTCAA GAGTTTCACGCCGGAAACCGAGTTCACCTCTCTTCGTACAAGCGTGGCAT CAACGAAGGCGCGCCGTTCATAGACCCTTGGCGAAATCCTTACATGATGC GGGGGGTTCCTCGTGATCAGGCGGAGATGTCCCGTCCCGTTAACGAGGTC AGTCAGTGCCTTCTTCCTTTCCACAAGGCACAAGAGACGTCTGGTGATGT TGATGGGATCGAACACCTAAGACTCCCAGTGAGATTTGCATTAAAACAGA AACGCGGGAGGACTACGCATAATGACCAATACATCCTTCTCATTGTACAA AAAAAACAATCGATGTATATGCTGGGGCTCGATTCAGGAAAGAGACGTGA ATGATGCGGTTGACAGTCGACCGTGGAACGTTCGGCCTCGACAGAAGGCA CCAATTACTCCCAAATACAAGCGAATGCCTCCCAAACATACCCTCTTTCG GGTTGTAAAGGCCCCCAACATATTCCAAATGCCCTTCCTGAGCTCGAATC GATCGAATGTTTTGCTAGAGAGCTTCCAACACATCTCTTGAGAACGCCCC CCCCCCCATCCGCTCAAACGATGCCACCCTCTACCTGTTGTAGATAACGC TCGGTAAGTATCCGGAGAAACCGTTCTACTTATCGGTGGGGGGCAACAAG TCTGCTGTGTTGCCCAACGGAATCTTCGACGTCATCCTCGATGCCGAGAA AACAGGCGGCATAGTGCGCACTCATAACGGGCGAACGCGAAGGTCAGGCA CCCGCACGCGTAGAAGCCGCTTGCTCCTTGCTTCACGGCTTGATGGTCAA TTAAATACCTCATGAATGCCAAAATATTCTTATCATCCCACATCGCGGTG GTGGTGTTCGTCCCTCTCTTCATGCGGAGGAAGTAGGGCAGCAACGTCAT GCCTTCCAGAATGCCATCTGCACTTAAGCTTATAAGCATGCATCAATCAG CTCGTCCCGTACAAAACGTTAGTGTTTTCTACAGCACTCATTTGCATCCC ACGAAAAAACACTTGAAAAGTTTACACCGTCTACGTCCAAGTGATATTCG TTCCTCAATCAAACCGCCCATCAGATTCGGTGTTCCCGACACGTGCGACG TGGACGACGGAGTACGAGTAGCTCCCAGTTCGACACTGTTCTTCCCCCCG GCACCACCCGGGAAGCGATTGCAACCGGCGGGTACGAGATAGCAGCTAGC TGGTTCCAAGGTCCCAGGCCCTCTCTTACAGGATCATCGGTGTTAAGATC GTGTGCGATGCAGCAAATTTTTCCGGTCCTTGCAAGAAGACCTGTCTTAC CCATATAACATACTAACTAATAGTTCTCCTTGTGGGGTATGCTATTTGGA ACCAAGATCTCATTTTTAATCATTAATTAAAACATTGCTTAAATCAATTT GGAAAAACGCACACAAGTAGACACACATACACGCGCGCGCGCGCGGCATC TTTCCGATCAGCCGAATGCTTGTGAGACACGAGAGGTCCAGTCGACGTCA ATTTGGGATCAACCGAACGAAGCCAAACCGTATCGAC
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig1165:81236..85472+

>mRNA_A-nodosum_M_contig1165.7.1 ID=mRNA_A-nodosum_M_contig1165.7.1|Name=mRNA_A-nodosum_M_contig1165.7.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1218bp|location=Sequence derived from alignment at A-nodosum_M_contig1165:81236..85472+ (Ascophyllum nodosum dioecious)
ATGGCGGACTTTTATGAAGTATGGCGATTTCGGGACTCTGTGCTTGCAAA
GTTGGAAGCCATGCTCAAGGATCAGGAGGCGATGGGGGAGCAGGAGCTCA
AGGCAGCGACAGCCATCAAGCGATTTTATCGAGCGAAGATCTTTCGATAC
TACTTCTGCCAAAAGAGGAAATCAATAATTCTGATAGCCAAAACTTTTCG
AGGTTACCGAGGCCGCCTGCGCGCCCAACAGGCGCTCGAGAAGCGTCACG
CGAAGGAGGCGATGGCGGTGTACCACCACCACGCACTAGTAATACAGGGG
ACGTTTAGAGGATTCCACAGCCGAAAATATAACTTCGACTACGCCGGGAG
GAAACGATATCTTCAAGAGGTGATCGACGCAGGCAATGCGGTTCGCGCGA
GGCTCCGGCGGCACGAGGTACAGCTCCTGCAAGAAGAAGCCGCCAGAACT
GAACAGACCCAACTAGCCGAGCTGCAGGCGATTGCCCAAAATCTGCACCA
TCTTGTCAGCACGAAGACCATAAGAGGGGTATTCAACTCGCCCTACGCAA
GGGGTTCCGGCCGCGTCCGGACCATCCAAGGGATAGCGGTGGAGCAACAT
CTCACCATCAGCGCCAAGGACTTGCTGCGATCTCGCGGGTACTTGAAGCG
CGGCCTTGAAACGGATCTTAATGGCCAGCGGCGGGTCCCCCTGAGAGGGC
TTGAGAGTCGACGAAGCGTGCAGGCGCAGGATCACTACGATTCACACGCG
CAGGCGGTTGCGCTTGACCAAGCCATTTCGCGTCTTAAGATGATCGGCCC
TCAAGAGTTTCACGCCGGAAACCGAGTTCACCTCTCTTCGTACAAGCGTG
GCATCAACGAAGGCGCGCCGTTCATAGACCCTTGGCGAAATCCTTACATG
ATGCGGGGGGTTCCTCGTGATCAGGCGGAGATGTCCCGTCCCGTTAACGA
GATAACGCTCGGTAAGTATCCGGAGAAACCGTTCTACTTATCGGTGGGGG
GCAACAAGTCTGCTGTGTTGCCCAACGGAATCTTCGACGTCATCCTCGAT
GCCGAGAAAACAGGCGGCATAGTGCGCACTCATAACGGGCGAACGCGAAG
ATTCGGTGTTCCCGACACGTGCGACGTGGACGACGGAGTACGAGTAGCTC
CCAGTTCGACACTGTTCTTCCCCCCGGCACCACCCGGGAAGCGATTGCAA
CCGGCGGGTACGAGATAG
back to top