mRNA_A-nodosum_M_contig1163.9.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1163.9.1 vs. uniprot
Match: D8LC82_ECTSI (Haloacid dehalogenase (HAD) superfamily protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC82_ECTSI) HSP 1 Score: 280 bits (716), Expect = 4.120e-92 Identity = 134/182 (73.63%), Postives = 153/182 (84.07%), Query Frame = 1
Query: 10 SPERVFRRPALAVPHLSVDHVGMLDFSALREAGCKGVIFDKDNTLTSPYEDSLHPLVKEGVRQCLEVFGDAVCIMSNSAGTRDDRGYEDAVRIEAELAIPVLRHDEKKPGGVTDVLAFFEGKGPE------DELCFVGDRLMTDVVFGNLHRMLTVHTKPLTLRGDNRPAVVFRFLERKVLL 537
S RV R PALAVPHLS+ H+G LDF L+ GCKGVIFDKDNTLT+PYED++HPLV+EG+++C+EVF +VCIMSNSAGTRDD Y DA+RIE L IPVLRHDEKKPGG+ DVLAFFEGK PE DELCFVGDRL+TDVVFGNLH MLTVHT+PLTL+GDNRPA VFR+LERKV +
Sbjct: 85 SMSRVVRHPALAVPHLSLAHIGRLDFEGLKAMGCKGVIFDKDNTLTAPYEDTVHPLVEEGLKRCMEVFEGSVCIMSNSAGTRDDPDYADAIRIETALGIPVLRHDEKKPGGIADVLAFFEGKDPEGGTVRLDELCFVGDRLLTDVVFGNLHGMLTVHTQPLTLKGDNRPAAVFRYLERKVFM 266
BLAST of mRNA_A-nodosum_M_contig1163.9.1 vs. uniprot
Match: A0A6H5K9X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9X3_9PHAE) HSP 1 Score: 272 bits (696), Expect = 4.060e-90 Identity = 131/182 (71.98%), Postives = 152/182 (83.52%), Query Frame = 1
Query: 10 SPERVFRRPALAVPHLSVDHVGMLDFSALREAGCKGVIFDKDNTLTSPYEDSLHPLVKEGVRQCLEVFGDAVCIMSNSAGTRDDRGYEDAVRIEAELAIPVLRHDEKKPGGVTDVLAFFEGKGPE------DELCFVGDRLMTDVVFGNLHRMLTVHTKPLTLRGDNRPAVVFRFLERKVLL 537
S RV R PALAVPHLS+ ++G LDF L+ GCKGVIFDKDNTLT+PYED++HPLV+EG+++C+EVF +VCIMSNSAGTRDD Y A+RIE L IPVLRHDEKKPGG+ DVLAFF+GK PE DELCFVGDRL+TDVVFGNLH MLTVHT+PLTL+GDNRPA VFR+LERKV +
Sbjct: 12 SMTRVVRHPALAVPHLSLANIGRLDFEGLKAMGCKGVIFDKDNTLTAPYEDTVHPLVEEGLKRCMEVFEGSVCIMSNSAGTRDDPDYVHAIRIETALGIPVLRHDEKKPGGIADVLAFFKGKDPEGGTVRLDELCFVGDRLLTDVVFGNLHGMLTVHTQPLTLKGDNRPAAVFRYLERKVFM 193
BLAST of mRNA_A-nodosum_M_contig1163.9.1 vs. uniprot
Match: A0A7S1ISK9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1ISK9_9EUGL) HSP 1 Score: 222 bits (565), Expect = 4.290e-70 Identity = 110/177 (62.15%), Postives = 134/177 (75.71%), Query Frame = 1
Query: 19 RVFRRPALAVPHLSVDHVGMLDFSALREAGCKGVIFDKDNTLTSPYEDSLHPLVKEGVRQCLEVFGDAVCIMSNSAGTRDDRGYEDAVRIEAELAIPVLRHDEKKPGGVTDVLAFFEGKGPE----DELCFVGDRLMTDVVFGNLHRMLTVHTKPLTLRGDNRPAVVFRFLERKVLL 537
RV +P+LA+PH++V H+G LDF ALREAGCKG++FDKDNTLT+PY + +HPLV+EG+ +CL F VCI+SNSAGT DD GYE A +IEA L +PV+RH EKKP G+ DVL FF + E EL VGDRL+TDVVFGNL+ MLTVHT+PLTL GDN+ A V R LE V L
Sbjct: 49 RVAAQPSLAIPHVTVTHIGCLDFHALREAGCKGIVFDKDNTLTAPYVEEVHPLVREGLDRCLREFQGRVCILSNSAGTDDDEGYEAARKIEAGLGLPVIRHKEKKPAGLQDVLDFFHHQSGEAVRPTELVMVGDRLLTDVVFGNLYGMLTVHTRPLTLEGDNKVARVIRPLETAVFL 225
BLAST of mRNA_A-nodosum_M_contig1163.9.1 vs. uniprot
Match: A0A835Z207_9STRA (Mitochondrial PGP phosphatase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z207_9STRA) HSP 1 Score: 218 bits (555), Expect = 3.170e-68 Identity = 102/175 (58.29%), Postives = 135/175 (77.14%), Query Frame = 1
Query: 22 VFRRPALAVPHLSVDHVGMLDFSALREAGCKGVIFDKDNTLTSPYEDSLHPLVKEGVRQCLEVFGDAVCIMSNSAGTRDDRGYEDAVRIEAELAIPVLRHDEKKPGGVTDVLAFFEGKGPED-----ELCFVGDRLMTDVVFGNLHRMLTVHTKPLTLRGDNRPAVVFRFLERKV 531
V R P+LAVPHL++ ++ LDF+AL+ G +G+IFDKDNTLT+PY + LHP + +G R+C FG +VCIMSNSAGT DD +E A++IE L IPVLRH EKKPGG+ +VLAFF + ++ +LC +GDRL+TDVVFGNLH MLTVHTKPLTL+GDN+ A+V R++E ++
Sbjct: 20 VIRHPSLAVPHLALTNIAQLDFAALKAMGIRGIIFDKDNTLTAPYVEELHPAISDGFRRCQSHFGGSVCIMSNSAGTGDDVNFESAIKIETGLGIPVLRHREKKPGGLPEVLAFFRERCADEGIEARDLCVIGDRLLTDVVFGNLHGMLTVHTKPLTLQGDNKVALVARYIESRI 194
BLAST of mRNA_A-nodosum_M_contig1163.9.1 vs. uniprot
Match: A0A8J9RZH6_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9RZH6_PHATR) HSP 1 Score: 183 bits (464), Expect = 1.550e-55 Identity = 98/176 (55.68%), Postives = 121/176 (68.75%), Query Frame = 1
Query: 22 VFRRPALAVPHLSVDHVGMLDFSALREAGCKGVIFDKDNTLTSPYEDSLHPLVKEGVRQCLEVFG-DAVCIMSNSAGTRDDRGYEDAVRIEAELAIPVLRHDEKKPGGVTDVLAFFEGKGPEDELCFVGDRLMTDVVFGNLHRMLTVHTKPLTLRG----DNRPAVVFRFLERKVL 534
V RRP L VP LSV V ++F+AL++ G V+FDKDNTLTSPYE+ +HPL +G+ + L VFG D V I+SNSAGT+DD Y DA+RIE L I V+RH+EKKPGG+ +VLA F+ P LC VGDRL+TD+VFGNLH MLTVH PL DN A + R +E K L
Sbjct: 16 VLRRPGLMVPQLSVATVSQMNFTALKDHGIAAVMFDKDNTLTSPYENEIHPLAAQGIDEALRVFGRDRVAILSNSAGTKDDVDYTDAIRIENVLGIQVIRHEEKKPGGLDEVLAHFDLTDPAT-LCMVGDRLLTDIVFGNLHGMLTVHCLPLCSGSENSKDNWTAKLLRPMENKAL 190
BLAST of mRNA_A-nodosum_M_contig1163.9.1 vs. uniprot
Match: A0A448ZEQ0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZEQ0_9STRA) HSP 1 Score: 181 bits (459), Expect = 3.540e-54 Identity = 95/177 (53.67%), Postives = 125/177 (70.62%), Query Frame = 1
Query: 22 VFRRPALAVPHLSVDHVGMLDFSALRE-AGCKGVIFDKDNTLTSPYEDSLHPLVKEGVRQCLEVFG-DAVCIMSNSAGTRDDRGYEDAVRIEAELAIPVLRHDEKKPGGVTDVLAFFEGKGPEDELCFVGDRLMTDVVFGNLHRMLTVHTKPLTL----RGDNRPAVVFRFLERKVL 534
V R P L VPH+SV +V L++ A++E AG + ++FDKDNTLT+PY+ ++H +G+++ E+FG + V IMSNSAGT+DD GYEDA IE L I V+RHDEKKPGG+ +VL F+ P LC VGDRL+TDVVFGNLH MLT+HT PL R DN P+ + R++E K L
Sbjct: 16 VLRHPTLIVPHVSVANVSELNYRAMKECAGIRAILFDKDNTLTAPYDMTVHRDAAKGLKRAKEIFGAENVAIMSNSAGTKDDPGYEDAKMIEEALGIAVIRHDEKKPGGLDEVLKHFDVDDPAT-LCMVGDRLLTDVVFGNLHSMLTIHTLPLCKGAENRQDNTPSKIIRYIENKGL 191
BLAST of mRNA_A-nodosum_M_contig1163.9.1 vs. uniprot
Match: A0A7S2RNF6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RNF6_9STRA) HSP 1 Score: 179 bits (453), Expect = 4.790e-54 Identity = 88/159 (55.35%), Postives = 117/159 (73.58%), Query Frame = 1
Query: 22 VFRRPALAVPHLSVDHVGMLDFSALRE-AGCKGVIFDKDNTLTSPYEDSLHPLVKEGVRQCLEVFG-DAVCIMSNSAGTRDDRGYEDAVRIEAELAIPVLRHDEKKPGGVTDVLAFFEGKGPEDELCFVGDRLMTDVVFGNLHRMLTVHTKPLTLRGDN 492
V RRP LA PHL VD + ++F+A+R+ G + VIFDKDNT+T+PYE ++H G++ L+VFG + V I+SNSAGT+DD GYEDA++IE E+ IPV+RHDEKKPGG+ +VL FE +LC VGDRL+TDVVFG+L+ MLT+H PL +N
Sbjct: 16 VIRRPYLASPHLHVDSISDVNFTAIRDKCGIRAVIFDKDNTITAPYETAVHSKASFGLQSALDVFGSENVAILSNSAGTKDDPGYEDALKIEMEMGIPVIRHDEKKPGGLQEVLNHFENVDDASQLCMVGDRLLTDVVFGSLYGMLTIHCLPLCEGEEN 174
BLAST of mRNA_A-nodosum_M_contig1163.9.1 vs. uniprot
Match: A0A7S2PRD8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PRD8_9STRA) HSP 1 Score: 179 bits (455), Expect = 2.810e-53 Identity = 94/177 (53.11%), Postives = 123/177 (69.49%), Query Frame = 1
Query: 22 VFRRPALAVPHLSVDHVGMLDFSALR-EAGCKGVIFDKDNTLTSPYEDSLHPLVKEGVRQCLEVFGDA-VCIMSNSAGTRDDRGYEDAVRIEAELAIPVLRHDEKKPGGVTDVLAFFEGKGPEDELCFVGDRLMTDVVFGNLHRMLTVHTKPLTL----RGDNRPAVVFRFLERKVL 534
V RRP LA PHL+V V ++++ALR EAG + VIFDKDNTL++PYE +HP +G++ +EVFG + V ++SNSAGT+DD GYEDA +IE + I V+RHDEKKPGG+ +V+ F+ +LC VGDRL+TD+VFGNLH MLTVH PL + DN+ A R E VL
Sbjct: 33 VMRRPYLASPHLAVGTVSEVNYTALRDEAGIRAVIFDKDNTLSAPYETVVHPKADQGLKNAMEVFGPSNVAVLSNSAGTKDDPGYEDAKKIEEAMGIAVIRHDEKKPGGLKEVMDHFDDVDDASQLCMVGDRLLTDIVFGNLHGMLTVHCLPLCSGEENKKDNKIASSIRTTENLVL 209
BLAST of mRNA_A-nodosum_M_contig1163.9.1 vs. uniprot
Match: A0A6V3JXN8_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3JXN8_9EUKA) HSP 1 Score: 179 bits (455), Expect = 3.250e-53 Identity = 91/175 (52.00%), Postives = 118/175 (67.43%), Query Frame = 1
Query: 19 RVFRRPALAVPHLSVDHVGMLDFSALREAGCKGVIFDKDNTLTSPYEDSLHPLVKEGVRQCLEVFG-DAVCIMSNSAGTRDDRGYEDAVRIEAELAIPVLRHDEKKPGGVTDVLAFFEGKGPEDELCFVGDRLMTDVVFGNLHRMLTVH-TKPLTLRGDNRPAVVFRFLERKVLL 537
RV R+P+L VPH+SV HVG +DF+AL+ +G + V+FDKDNTLT+PY HPL K +C+E FG + V IMSNSAGT DD Y +A +E L +PVLRH KKPGG ++ A + G D++C +GDRL TDV+FG LH +LTVH T+ L GDN A + LE +LL
Sbjct: 68 RVLRKPSLLVPHVSVPHVGHMDFAALKASGIRAVVFDKDNTLTAPYSLEPHPLTKPAFAKCVEEFGAENVIIMSNSAGTNDDAEYREAKIVEDALGVPVLRHSAKKPGGFDELTAHYNGALTPDQICIIGDRLFTDVLFGTLHGLLTVHVTQSLKHEGDNVLARAIKALENGILL 242
BLAST of mRNA_A-nodosum_M_contig1163.9.1 vs. uniprot
Match: A0A7S2TGD2_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TGD2_9EUKA) HSP 1 Score: 180 bits (456), Expect = 4.820e-53 Identity = 93/175 (53.14%), Postives = 120/175 (68.57%), Query Frame = 1
Query: 19 RVFRRPALAVPHLSVDHVGMLDFSALREAGCKGVIFDKDNTLTSPYEDSLHPLVKEGVRQCLEVFG-DAVCIMSNSAGTRDDRGYEDAVRIEAELAIPVLRHDEKKPGGVTDVLAFFEGKGPEDELCFVGDRLMTDVVFGNLHRMLTVH-TKPLTLRGDNRPAVVFRFLERKVLL 537
+V RRP+L +PH+SV HVG LDF ALR +G + V+FDKDNTLT+PY HPL K G +C+EVFG + V IMSNSAGT DD + +A +E L +PVLRH KKPGG ++ A + G D++C VGDRL TDV+FG LH +L+V T+ L +GDN A V + LE +LL
Sbjct: 93 QVIRRPSLLLPHISVPHVGHLDFDALRASGIRAVVFDKDNTLTAPYSLEPHPLTKPGFEKCVEVFGAENVMIMSNSAGTDDDEEHREARVVEEALGVPVLRHRAKKPGGYAELAAHYGGALTPDQMCIVGDRLFTDVLFGTLHGLLSVQVTQSLKHQGDNALARVIKALENGILL 267 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1163.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1163.9.1 >prot_A-nodosum_M_contig1163.9.1 ID=prot_A-nodosum_M_contig1163.9.1|Name=mRNA_A-nodosum_M_contig1163.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=192bp LRQSPERVFRRPALAVPHLSVDHVGMLDFSALREAGCKGVIFDKDNTLTSback to top mRNA from alignment at A-nodosum_M_contig1163:112675..113904- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1163.9.1 ID=mRNA_A-nodosum_M_contig1163.9.1|Name=mRNA_A-nodosum_M_contig1163.9.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1230bp|location=Sequence derived from alignment at A-nodosum_M_contig1163:112675..113904- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1163:112675..113904- >mRNA_A-nodosum_M_contig1163.9.1 ID=mRNA_A-nodosum_M_contig1163.9.1|Name=mRNA_A-nodosum_M_contig1163.9.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=576bp|location=Sequence derived from alignment at A-nodosum_M_contig1163:112675..113904- (Ascophyllum nodosum dioecious)back to top |