mRNA_A-nodosum_M_contig1162.22.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1162.22.1
Unique NamemRNA_A-nodosum_M_contig1162.22.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig1162.22.1 vs. uniprot
Match: A0A6H5JQP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQP8_9PHAE)

HSP 1 Score: 363 bits (933), Expect = 3.850e-113
Identity = 224/520 (43.08%), Postives = 267/520 (51.35%), Query Frame = 3 
Query:  207 LPPEFNACFPSSSVS----------------RRKIRWGFWSLNDREWMKLVEDNYNIGHREAGTTSSLSSSSTDVPWLIPHTIHHVWLGGDIPRRFAFLRDTWRSRHES-----------------WELRLWTEADIESFGLENKEAYDAAGNFGEKSDILRYEILLRHGGLYVDVDFLCLGAFDDLHRRYDFYAGVSNTGTFELNNGLVGCCPGHPIMRNVVNRIRETWSAPPVTVEARSCQGGPRDIGNNTPCLVAGALTGEFTPLAGVEGARIGSVMGASISGCGTVLDGKETGMRAEAGDPLATLMGAFGDGEGRXXXXXXVKGLLAGLLGDEDRACLAQAVLERPGNAMTTIAKTGPGAFTAAVMQWMVEATAGNSEAACHSL--ATVFDGGDRTTHRSHGRLAAVLSGDGEDRGAKLEPEPEPSS---------------------------------VMILPPSYFYPVPNNVV----GDLVGDGSDRGVFDRTGHYFARESLAAHLWAKSWQ 1550
            L P F+ CF  S  S                R KIRWG WS ND EWM+LV+DNYN  HR AG          D   LIP  IHH+WLG  +P  FA L ++W +RH                   WE+RLWT+ADI +FGLEN+ AYDAA NFG+KSDILRYEILLRHGGLYVDVDFLCL +FDDLHRRY+FYAGVSNTGTFELNNGL+GC PGHPIMR++VNRI+ +  + P +    S  G P     ++  + AG L                 + G  ++G  T   G         GDPL+ LMGA G+  G         GLLAGLLG +DRA L QAV     +A  TI KTGPG FT AVM WMV +  G   AA  +   +      +     S G  A      G                                                 MILPPSY YP+PNN      G L+GDG++ GV +R G Y + ESLAAHLW +SWQ
Sbjct:   22 LRPVFSDCFSPSPTSXXXXXXXXXAASILSARAKIRWGLWSPNDAEWMQLVQDNYNKHHRLAGPIRE------DGEPLIPLKIHHIWLGSPLPAAFARLCESWLARHSGPSSQGLGHEMSKSSSTPWEVRLWTDADINAFGLENRGAYDAAQNFGQKSDILRYEILLRHGGLYVDVDFLCLSSFDDLHRRYEFYAGVSNTGTFELNNGLIGCRPGHPIMRDIVNRIKSSCCSLPSSTPP-SHPGKP-----SSSSVAAGVL-----------------LSGVGVAGSVTDAGGDGXXXGTTVGDPLSALMGALGEEGGAG-------GLLAGLLGGDDRARLRQAVEVEADSATETIVKTGPGVFTRAVMAWMVSSATGEDRAAPATADGSGTSSAAEEDIFHSTGTAARDADAFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAATRPAMILPPSYLYPIPNNAAAAKAGLLIGDGTESGVRERAGGYLSSESLAAHLWGRSWQ 505
[Close]
BLAST of mRNA_A-nodosum_M_contig1162.22.1 vs. uniprot
Match: D7FIJ5_ECTSI (Surface protein Sur1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ5_ECTSI)

HSP 1 Score: 231 bits (590), Expect = 1.920e-67
Identity = 108/177 (61.02%), Postives = 128/177 (72.32%), Query Frame = 3 
Query:  261 IRWGFWSLNDREWMKLVEDNYNIGHREAGTTSSLSSSSTDVPWLIPHTIHHVWLGGDIPRRFAFLRDTWRSRHES-----------------WELRLWTEADIESFGLENKEAYDAAGNFGEKSDILRYEILLRHGGLYVDVDFLCLGAFDDLHRRYDFYAGVSNTGTFELNNGLVG 740
            +RWG WS  D EWM+LV+DNYN  HR AG          D   LIP  IHH+WLG  +P  FA LR++W +RH                   WE+RLWT+AD+++FGLEN+ AYDAA NFG+KSDILRYE+LLRHGGLYVDVDFLCLG+FDDLH+RY+FYAGVSNTGTFELNNGL+G
Sbjct:    1 MRWGLWSPIDAEWMQLVQDNYNKHHRLAGPVRE------DGEALIPLKIHHIWLGSPLPEAFARLRESWLARHSGLSSQGRGPERSNGGSTPWEVRLWTDADVDAFGLENRGAYDAAQNFGQKSDILRYEVLLRHGGLYVDVDFLCLGSFDDLHKRYEFYAGVSNTGTFELNNGLIG 171
[Close]
BLAST of mRNA_A-nodosum_M_contig1162.22.1 vs. uniprot
Match: A0A836C8H1_9STRA (Surface protein Sur1 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8H1_9STRA)

HSP 1 Score: 189 bits (481), Expect = 2.680e-52
Identity = 86/176 (48.86%), Postives = 113/176 (64.20%), Query Frame = 3 
Query:  213 PEFNACFPSSSVSRRKIRWGFWSLNDREWMKLVEDNYNIGHREAGTTSSLSSSSTDVPWLIPHTIHHVWLGGDIPRRFAFLRDTWRSRHESWELRLWTEADIESFGLENKEAYDAAGNFGEKSDILRYEILLRHGGLYVDVDFLCLGAFDDLHRRYDFYAGVSNTGTFELNNGLVG 740
            P F  C PS     R ++W  WS  DR W+ L   +Y    R+    S  ++++      IPHT+H VWLGG +P +F  LR++W   H+ WELRLW   D+E FGLEN+ A+DAA N+GEKSDI RYEIL RHGG+YVDVDFLCL +   +    DF+AG++N G  E+NNGL+G
Sbjct:    8 PAFEDCLPSD----RPLKWALWSTEDRRWLHLASLHYEHTWRQR--CSGDATAAIGQQPCIPHTLHQVWLGGSMPSKFRDLRESWAKLHDGWELRLWGGGDVEDFGLENRAAFDAATNYGEKSDIFRYEILHRHGGIYVDVDFLCLQSLQVMADNLDFFAGLANVGAVEINNGLIG 177
[Close]
BLAST of mRNA_A-nodosum_M_contig1162.22.1 vs. uniprot
Match: A0A7S1CD16_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CD16_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.140e-42
Identity = 76/157 (48.41%), Postives = 100/157 (63.69%), Query Frame = 3 
Query:  393 IPHTIHHVWLGGDIPRRFAFLRDTWRSRH---ESWELRLWTEADIESFGLENKEAYDAAGNFGEKSDILRYEILLRHGGLYVDVDFLCLGAFDDLHRRYDFYAGVSNTGTFELNNGLVGCCPGHPIMRNVVNRIRETWSAPPVTVEARSCQGGPRDI 854
            IP  +HHVWLGG +PRRFA LR TW + H     W+  LW +A++ +  L N+ A+DAAGN+GEKSDILRYE+L   GG+YVDVD   +     LHR  D Y G SNTGTFELNN +VGC   HP++R + +R+R   +  P+   A +    P  +
Sbjct:   30 IPRIVHHVWLGGRLPRRFARLRATWTTTHPPSRGWQHVLWGDAEVAALTLRNRAAFDAAGNYGEKSDILRYELLWAFGGVYVDVDMQAVRPLTPLHRVCDLYVGFSNTGTFELNNAVVGCARHHPLLRRLADRVRRPQAPSPLLAMAAALGALPAGV 186
[Close]
BLAST of mRNA_A-nodosum_M_contig1162.22.1 vs. uniprot
Match: A0A0G4I5X9_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I5X9_9ALVE)

HSP 1 Score: 170 bits (431), Expect = 2.910e-42
Identity = 134/458 (29.26%), Postives = 198/458 (43.23%), Query Frame = 3 
Query:  237 SSSVSRRKIRWGFWSLNDREWMKLVEDNYNIGHREAGTTSSLSSSSTDVPWLIPHTIHHVWLGG-DIPRRFAFLRDTWRSRHESWELRLWTEADIESFGLENKEAYDAAGNFGEKSDILRYEILLRHGGLYVDVDFLCLGAFDDLHRR--YDFYAGVSNTGTFELNNGLVGCCPGHPIMRNVVNRIR----ETWSAPPVTVEARSCQGGPRDIGNNTPCLVAGALTGEFTPLAGVEGARIGSVMGASISGCGTVLDGKETGMRAEAGDPLATLMGAFGDGEGRXXXXXXVKGLLAGLLGDEDRACLAQAVLERPGNAMTTIAKTGPGAFTAAVMQWMVEATAGNSEAACHSLATVFDGGDRTTHRSHGRL--------AAVLSGDGEDRGAKLEPEPEPS-----SVMILPPSYFYPVPNNVVGDLVGDGSDRGVFDRTGHYFARESLAAHLWAKSWQ 1550
            S S  +RK +W  WS NDR+W + + +++     + G   S  S       +IP  +H +WLG  +IP +     +TW+ RH  WE +LW  AD+ES  L N+ AY+ A NF  KSDILR E+L + GG+YVDVD+ C+G+  +L     + F+ G +N G  ELNNGL+G  PGHP +  +++RI     E W            Q G  +   +T   V G L        G+EG   G V+G          + +E   R E G P  T      DGE R                +ED      +        + T   TGPG  T AV               C         GD    +  G+L         +V   + E  G + E   + S      +++LP S F P+PN +  ++  +   R + +    +   ++LA H W  +WQ
Sbjct:   49 SRSTQQRKWKWNLWSPNDRQWGRKIVEHWRRHKEQEGQEMSHHS-------VIPKRLHQIWLGPKEIPSQCKEFMETWKRRHPEWEYKLWRHADVESLKLRNRSAYEEAENFAHKSDILRLELLSQFGGVYVDVDYECVGSLRELCESGCFGFFCGAANVGGVELNNGLMGASPGHPFVSVLMDRIAVSSSEHWG-----------QWGGEEA--DTASRVFGILKALGN---GLEGFGTGGVVGVGSREANGGEEHREKEERKEGGGPF-TQGREERDGEEREA--------------EEDYGSPIPSASSPFAFFLET---TGPGLLTRAV---------------CRLGGLGSGKGDGKRKKERGKLKEGGSSKACSVEREEEEGTGEEAEKTEDRSMSKNQKILVLPASVFCPIPNVLRREMRHEDGVRRLKEE---FVKEDTLAIHHWMGTWQ 447
[Close]
BLAST of mRNA_A-nodosum_M_contig1162.22.1 vs. uniprot
Match: A0A6G0WYT2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYT2_9STRA)

HSP 1 Score: 164 bits (415), Expect = 1.470e-41
Identity = 81/181 (44.75%), Postives = 109/181 (60.22%), Query Frame = 3 
Query:  261 IRWGFWSLNDREWMKLVEDNYNIGHREAGTTSSLSSSSTDVPWLIPHTIHHVWLGGDIPRRFAFLRDTWRSRHESWELRLWTEADIESFGLENKEAYDAAGNFGEKSDILRYEILLRHGGLYVDVDFLCLGAFDDLHRR--YDFYAGVSNTGTFELNNGLVGCCPGHPIMRNVVNRI-RET 794
            +R+  W   D  W      ++++  R         +  +  P +IP  IH +WLG  +   F     +W++ H  WE  LWTE +IE++ L+N+ AYD A NFGEKSDILRYEIL   GGLYVDVDF CL  FD LH     +FYAG+SNT + E+NN L+GC P HPI++ V++ I RET
Sbjct:    1 MRYKLWGAEDMAW------HFHLSERFDEQRDLWEAPPSPGPPVIPKRIHQIWLGPALMDEFHSYIQSWKNHHPDWEYTLWTEREIENWKLQNQAAYDMATNFGEKSDILRYEILETFGGLYVDVDFECLKPFDQLHENPTCEFYAGLSNTRSVEINNALIGCVPNHPILKAVISAIQRET 175
[Close]
BLAST of mRNA_A-nodosum_M_contig1162.22.1 vs. uniprot
Match: F0W3M3_9STRA (Surface protein Sur1 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W3M3_9STRA)

HSP 1 Score: 164 bits (415), Expect = 2.470e-41
Identity = 77/174 (44.25%), Postives = 103/174 (59.20%), Query Frame = 3 
Query:  258 KIRWGFWSLNDREWMKLVEDNYNIGHREAGTTSSLSSSSTDVPWLIPHTIHHVWLGGD-IPRRFAFLRDTWRSRHESWELRLWTEADIESFGLENKEAYDAAGNFGEKSDILRYEILLRHGGLYVDVDFLCLGAFDDLHRRYDFYAGVSNTGTFELNNGLVGCCPGHPIMRNVV 776
            + +W FWS +DR+W + +     +         +    + D    IP  IH +WLG   IP       +TWR  H  WE +LWT+  + +  L+NKE +D AGN+GEKSDILRYEILL+ GG+YVDVDF CL  F DL + + F  G+SNT   ELNNGL+ C   HPI+R +V
Sbjct:   39 ECKWNFWSPDDRDWNQAL-----LSQSTERLCDNQMFPTVDNAVRIPFIIHQIWLGPHPIPAFCLQQMETWRQIHPQWEYKLWTDTQVSTLKLQNKEHFDLAGNYGEKSDILRYEILLQFGGIYVDVDFKCLRLFQDLLQAFSFITGISNTDVVELNNGLIACTRNHPIVRELV 207
[Close]
BLAST of mRNA_A-nodosum_M_contig1162.22.1 vs. uniprot
Match: A0A813E7U9_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813E7U9_POLGL)

HSP 1 Score: 158 bits (399), Expect = 8.140e-40
Identity = 80/184 (43.48%), Postives = 106/184 (57.61%), Query Frame = 3 
Query:  264 RWGFWSLNDREWMKLVEDNYNIGHREAGTTSSLSSSSTDVPWLIPHTIHHVWLGG-DIPRRFAFLRDTWRSRHESWELRLWTEADIESFGLEN----KEAYDAAGNFGEKSDILRYEILLRHGGLYVDVDFLCLGAFDDLHRRYDFYAGVSNTGTFELNNGLVGCCPGHPIMRNVVNRIRETWS 800
            RWG WS +D+ W   +++ +     EA T+            +IP  +H +WLG   +P         WR RH +WE RLWT+AD E+  L++     EA+ AA N  EKSD+LR  I+L HGGLYVDVDF CL  FD+LH R  FY G+SN   FELNNGL    PGHP++R +  R+   W+
Sbjct:   39 RWGLWSPSDKAWHNFLKNLWC----EAATSEGRP--------VIPLRLHQIWLGPRQLPAECQQFAQGWRGRHPAWEYRLWTDADAEA-ELQDLPRMAEAFRAAKNPAEKSDLLRLAIVLHHGGLYVDVDFECLRPFDELHDRVSFYTGISNVAAFELNNGLFAAAPGHPLLRYLCERVGRRWA 209
[Close]
BLAST of mRNA_A-nodosum_M_contig1162.22.1 vs. uniprot
Match: A0A812NYH8_SYMPI (RH31 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812NYH8_SYMPI)

HSP 1 Score: 167 bits (422), Expect = 3.700e-39
Identity = 84/184 (45.65%), Postives = 108/184 (58.70%), Query Frame = 3 
Query:  261 IRWGFWSLNDREWMKLVEDNYNIGHREAGTTSSLSSSSTDVPWLIPHTIHHVWLGG-DIPRRFAFLRDTWRSRHESWELRLWTEADIESF----GLENKEAYDAAGNFGEKSDILRYEILLRHGGLYVDVDFLCLGAFDDLHRRYDFYAGVSNTGTFELNNGLVGCCPGHPIMRNVVNRIRETW 797
            IRWG WS NDR+W++ +++ +     + G+   L     D    IP  IH +WLGG   P        +WRSRH  WE RLWT+AD+       GL   +AY+AA N  EKSDILR  I+LRHGGLYVDVDF CL     LH R  FY G+SN G  E+NNGL    PGHP++  + +R+ + W
Sbjct:  524 IRWGLWSPNDRQWLEELKELWQDAVAQLGSAPGL-----DPRPAIPQCIHQIWLGGRSRPEPCEGFTASWRSRHPGWEYRLWTDADVAEELTHPGL--AQAYEAASNPAEKSDILRLAIILRHGGLYVDVDFECLQPLGALHSRASFYCGLSNVGAVEVNNGLFAATPGHPLVSYLCDRLGKPW 700
[Close]
BLAST of mRNA_A-nodosum_M_contig1162.22.1 vs. uniprot
Match: A0A7S3PQE5_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PQE5_9STRA)

HSP 1 Score: 157 bits (398), Expect = 5.310e-39
Identity = 79/202 (39.11%), Postives = 118/202 (58.42%), Query Frame = 3 
Query:  204 LLPPEFNACFPSSSVSRRKIRWGFWSLNDREWMKLVEDNYNIGHREAGTTSSLSSSSTDVPWLIPHTIHHVWLGGD-IPRRFAFLRDTWRSRHESWELRLWTEADIESFGLENKEAYDAAGNFGEKSDILRYEILLRHGGLYVDVDFLCLGAFDDL--HRRYDFYAGVSNTGTFELNNGLVGCCPGHPIMRNVVNRIRETWS 800
            + P  F+ C         K R+G W  ND+ W+ L+E  Y I       T  LS  +T     IP  IHH+WLG D +P       ++W++ ++ WE RLWT+ DI +  L N++A+D A N+GEKSDI+RYEIL ++GG+YVD+DF C+    +L   ++  F AG+SN    E+NNG + C P HP++  +++ IR + S
Sbjct:   22 ISPLSFSRCIGGDIG---KFRFGLWDKNDKAWLDLLESRYRID------TEKLSPEAT-----IPKIIHHIWLGPDPLPPIAQTWIESWKAINKDWEYRLWTDDDISNLNLINQQAFDKAFNYGEKSDIVRYEILHQYGGVYVDIDFECVQELQNLVSMKKVGFIAGMSNVRAVEINNGFIACVPSHPLLDILISGIRPSDS 209
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1162.22.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQP8_9PHAE3.850e-11343.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIJ5_ECTSI1.920e-6761.02Surface protein Sur1 n=1 Tax=Ectocarpus siliculosu... [more]
A0A836C8H1_9STRA2.680e-5248.86Surface protein Sur1 (Fragment) n=1 Tax=Tribonema ... [more]
A0A7S1CD16_9STRA1.140e-4248.41Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A0G4I5X9_9ALVE2.910e-4229.26Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A6G0WYT2_9STRA1.470e-4144.75Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
F0W3M3_9STRA2.470e-4144.25Surface protein Sur1 putative n=1 Tax=Albugo laiba... [more]
A0A813E7U9_POLGL8.140e-4043.48Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
A0A812NYH8_SYMPI3.700e-3945.65RH31 protein n=1 Tax=Symbiodinium pilosum TaxID=29... [more]
A0A7S3PQE5_9STRA5.310e-3939.11Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1162contigA-nodosum_M_contig1162:158898..164658 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FIJ5
PFAMsGly_transf_sug
Model size2457
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue7.81e-71
EggNOG OGsCOG3774@1|root,2S4FC@2759|Eukaryota
DescriptionGlycosyltransferase sugar-binding region containing DXD motif
Cds size1542
COG categoryM
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1162.22.1prot_A-nodosum_M_contig1162.22.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1162 159796..164641 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866568.0063453-UTR-A-nodosum_M_contig1162:158897..1597951680866568.0063453-UTR-A-nodosum_M_contig1162:158897..159795Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1162 158898..159795 -
1680866568.0646152-UTR-A-nodosum_M_contig1162:164641..1646581680866568.0646152-UTR-A-nodosum_M_contig1162:164641..164658Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1162 164642..164658 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866568.0163574-CDS-A-nodosum_M_contig1162:159795..1602051680866568.0163574-CDS-A-nodosum_M_contig1162:159795..160205Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1162 159796..160205 -
1680866568.0295458-CDS-A-nodosum_M_contig1162:160907..1613171680866568.0295458-CDS-A-nodosum_M_contig1162:160907..161317Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1162 160908..161317 -
1680866568.037462-CDS-A-nodosum_M_contig1162:161549..1616891680866568.037462-CDS-A-nodosum_M_contig1162:161549..161689Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1162 161550..161689 -
1680866568.0475473-CDS-A-nodosum_M_contig1162:162417..1626381680866568.0475473-CDS-A-nodosum_M_contig1162:162417..162638Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1162 162418..162638 -
1680866568.0555613-CDS-A-nodosum_M_contig1162:164280..1646411680866568.0555613-CDS-A-nodosum_M_contig1162:164280..164641Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1162 164281..164641 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1162.22.1

>prot_A-nodosum_M_contig1162.22.1 ID=prot_A-nodosum_M_contig1162.22.1|Name=mRNA_A-nodosum_M_contig1162.22.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=514bp
MTAGPESTSPPPSFIDQQHSSSDGKKNNGSHSHRHLSQARARQQQEGGEK
GNASSLASSNAPLLPPEFNACFPSSSVSRRKIRWGFWSLNDREWMKLVED
NYNIGHREAGTTSSLSSSSTDVPWLIPHTIHHVWLGGDIPRRFAFLRDTW
RSRHESWELRLWTEADIESFGLENKEAYDAAGNFGEKSDILRYEILLRHG
GLYVDVDFLCLGAFDDLHRRYDFYAGVSNTGTFELNNGLVGCCPGHPIMR
NVVNRIRETWSAPPVTVEARSCQGGPRDIGNNTPCLVAGALTGEFTPLAG
VEGARIGSVMGASISGCGTVLDGKETGMRAEAGDPLATLMGAFGDGEGRG
KGRGDVKGLLAGLLGDEDRACLAQAVLERPGNAMTTIAKTGPGAFTAAVM
QWMVEATAGNSEAACHSLATVFDGGDRTTHRSHGRLAAVLSGDGEDRGAK
LEPEPEPSSVMILPPSYFYPVPNNVVGDLVGDGSDRGVFDRTGHYFARES
LAAHLWAKSWQYS*
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mRNA from alignment at A-nodosum_M_contig1162:158898..164658-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1162.22.1 ID=mRNA_A-nodosum_M_contig1162.22.1|Name=mRNA_A-nodosum_M_contig1162.22.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5761bp|location=Sequence derived from alignment at A-nodosum_M_contig1162:158898..164658- (Ascophyllum nodosum dioecious)
AATTTGTTGCTTGCGGAATGACGGCCGGTCCTGAGTCGACGTCACCTCCT
CCCTCATTCATTGATCAACAGCACAGTTCGAGTGATGGCAAAAAAAATAA
TGGCAGCCACAGCCATCGACATTTGTCGCAGGCGCGTGCTCGGCAGCAAC
AGGAAGGCGGCGAAAAGGGCAATGCTTCTTCCCTAGCTTCGTCCAACGCA
CCTCTGTTGCCACCAGAGTTCAATGCTTGTTTTCCATCTTCGTCTGTGAG
TCGGCGTAAAATACGATGGGGCTTTTGGTCGCTGAACGATCGCGAATGGA
TGAAGCTTGTCGAGGACAACTACAACATCGGACACCGCGAGGCAGGGACA
ACATCGTCATTGTCATCGTCCTCAACAGGTGCACCGCAGCGCAAACACTC
TTACTGTAATATTCTGTAGTACGGTACAGCACTGGGGTCGACGGCGCATG
CTGTACCACGAACTCTGAGTGCTCTGGCTAAGAAAAAATCTGAACGTAGC
TAAACCTCCTGAGCAATCGGAGGTTTAGGTAGGAACATTGGCTGTAAGTA
CAAAAACGCTTGTCGCGCATATCTATATCGGCCGAGAAAATCCAGGAAAT
TAGCCGTTTTGGGGAACTGGAAATTATTTTGGATGATCCCCGTATTTTTT
ATACATCTGAGCACTCCAGAAATATGGCTGCTCTTGTTCTGGATAGCATC
CAGTCAATCCAGCGGTGCTCCTCCACTGGGTACCAGTACTCCGAGTTGTT
ATTCTTCTCTTGCCTGTTTTTCGGGCAGCTTAAACTGTACGATGGGTCCT
CGTGGCGGGGATAATAGACTATATCCCCGCTACCTTTACGAATTCCGATA
CGCCTTCCACAAACAACGCTTTCCTTCTGAAAGCTACATTTTCGGCCGAG
AAAATCCAGGAAATTAGCCGTTTTGGGGAACTGGAAATTATTTGGATGAT
CCCCGTATTTTTTATACATCTGAGCACTCCAGAAATCTGGCTGCTCTTGT
TCTGGATAGCATCCAGCTCAATCCAGAATACCCGAAAATCTGAACGCATC
TAGACCACTGGGGGAAAAATGTGAAAACGCTTAAATGTGCTTGAGCTTCC
GAGCTAAATATATGAATGTTATCGACCTCCCATTATTTTCCACTTGCGCT
GTATGCGTAGGGATGCAGCGGCGAGGACCTTGGGCAAATCGACCTTCATT
GAGCCTCCTGTGACATTTGTCCAAAAACCAGAGAAGCTGTTTTTTTACGT
CCGCACCCCGTAAACGCATCACGCCCCTTTCATCACGCACTGAGTTCATT
GAGTTTCGCACCCCCTGCCCTTGTAAACGCACCCCCCCTTGTAAACGCAC
CGGTGCGATCTGCTGCGGGTGAGTATATTTTAGCGTTGCACCAGAACTAC
GACTGTGGCTCTTCTTTGGGTTCAACATTTCCTTGCGCTTTATACTGCAA
TAGTGATAACATCCAGAGTTCTGGGCGAGAACACTCGGATTATCGAAAAC
ATCATTTTTTTTATGGTGATTTTATTTTAGATCAGAACATCACATATGTA
TGGCTTCGGTTATACGAAGTACGTCATGAGCTATTAAGAGCTGGCCCGTA
TCCAAAAAATATCCCTGTTTAAAGAAAAATCTGAATGCACCTAGACCTTC
TGAGCATCTCCCAGTCAGGGGGAAAAAATGTTATTGCATGCGGGCGATCT
TTTATTCTCTCGAACATTTTTCTAGTTCGGCTGACCACAAGCAGGATTGG
CAACCGTACCCGGTCGGTCCCCCATCAGCTGAACGCGATGACCAATACCT
CGACTACAGCGCAGCGAAGCACAAGAGCATGATTATTCCCAACCCAGCAA
AAAAGATCCGCAGTTTTGTGATCACCCCCTCGACATTCCTTCCTCGTCCA
CCCGTCTGTTTGAACATCTATGAACGGTGATTAGAAGATGGCGATCCTTC
TCCCGCTCCCGCGATCCCCGTCCCTCCACCCGAACTACCATCGTACCATC
TCAACGGTGCTTTCCCGCAGATGTTCCTTGGTTGATCCCACACACCATTC
ATCACGTCTGGCTGGGAGGGGATATACCCCGACGTTTCGCCTTTCTACGC
GACACCTGGAGGTCGAGACATGAGAGCTGGGAGTTGCGCTTGTGGACGGA
GGCGGACATCGAGTCGTTCGGGCTGGAGAACAAGGAGGCGTACGATGCCG
CGGGGAACTTTGGAGAAAAGTCCGATATCTTGCGTTACGAGGTATGAAGG
TACATCGGGATGTTTGTGCACGATTGCATGACGTGGGCATGAGTCTTTTT
GTGAAGATACAGCTTCGTGATTCCATATTAGAGACTGCTATTAATAATAG
CTTTCGATGGAAAGCGAGGTGACTCTTGCAGCAGGATAACCGGTGGACAT
AATCCGTACCATGACACTCGTCGCTCGAGTGGTCTAGTAGGTAAACTGCA
CACCTGCTAGTGCGGAAGTCGTGAGTTCGATTCTTACCGAAGTAGGATTT
GTGTCCTTTCTTTCGTAACGGAAAGCGTGGGAACGTGAGTAAGTAAAATT
CAACCATTGGTTGACGAATTGTGAGAGTGCTGAACTTGCATCGCGATAAA
AAATCGTAAGGCGTGAACCGGGGAGAGATGGGAAGATCCTTAGTGACCAC
AGGCAGGGTGGTAATGACGAGGTCCATCGTCTATAAGTGAGATTTAAAAA
TAAAAATAAAAAATCACCCATAATCGATATTGAAAAGACCTGCAAGAAGA
CCTGTAGAGTTATACTGACGCGGAGCGGGGGAAGGAAGGAAAGGAAATAA
CCAAAGAGAAATCGTTTCTGCTTTCGCTATTTATTCGTTGCCTGTCTGGT
TTCGCGTTGGAGACGCGTGTAACCTTTTTCTTCGAAGTTGTCAACGGGAG
CTACGTTTCATCAGGCACCAGAGAGGCCGAGGTCCATCTACGTCGATTGT
ATTCTTTGATGCACGGCAGATTCTGCTCAGACACGGTGGACTCTACGTCG
ATGTGGACTTCCTTTGCCTCGGAGCGTTCGACGATCTTCACAGGCGTTAC
GACTTCTACGCCGGGGTTTCTAACACAGGAACGTTCGAGCTCAACAATGG
CCTCGTGGGGTGAGGGCCCGCTCAATCCGAATCGGTGTGAACCACCCAAA
AGTGTCATCAGGGAGGGCACATTAGGGAGGGCAAAGATACCCGAATGCGT
AGCGATTGTACAAGCAATATGAACCCCCGATTGAAAAGGCTCCGGCGTAA
TGATGTACGAACGAAGCGACCCTTCGCCCTAGGGATACTTGACCTCGTTA
CCCTGCCTCTTCTCTACTACCTGCTCCTGCGCATGCCGCAGCTGTTGCCC
AGGTCATCCGATTATGCGCAACGTTGTCAATCGCATCCGGGAGACCTGGA
GCGCTCCGCCTGTAACAGTTGAGGCAAGGAGCTGTCAGGGGGGCCCTCGT
GACATCGGAAACAACACGCCCTGCCTCGTCGCTGGTGCTCTGACGGGTGA
ATTCACGCCGCTCGCGGGGGTGGAGGGTGCCAGAATAGGGTCGGTGATGG
GGGCTTCAATAAGCGGTTGCGGCACGGTTTTGGACGGGAAGGAGACGGGG
ATGAGGGCGGAGGCTGGAGATCCGCTCGCAACCCTCATGGGTGCGTTTGG
AGACGGTGAAGGACGGGGAAAGGGAAGAGGAGATGTGAAGGGGCTGCTCG
CGGGCCTGCTGGGAGATGAAGATAGGGCGTGCTTGGCGCAAGCTGTCTTA
GGTGGGAAGCGACGACCCATTAGCAATAATGGCGTTGAAGTTCCGTGCCT
CTCAATGAAACCGTTACTGTTTTGCCAGGCCTTTTGAAGGCATGAGCAAC
ATAGATGCGTTTCTCGCCAGCGTCGAGCTTTTGACCACCCCCCCCCCCCC
CTACTAGAGAAAGCACGGCTTTTCCACAGCTTCAGGCAGGGTTGGCCGTG
ATGATCAAATGGCAACATATTCCGCGGTACGCATGTGGGTGGTAATGTCG
ACGCTTCAGCGGTGTGCTTTGAAGCAAGCTACTCCGTGAAGTCTGCGCGA
CAGAGGATCTACGGCACGCGATCCACGCTGTTATGTTCACCGTTCACCAT
CGCCGCCCCGTTCTGGATGCGCAACCAGCTGGGCTTTCGCGTGTATATGA
TACGAAAGACTCGACTTACCGCCAACAAGCAAACAATGCTGAATTCGCAA
CCCCGGAGGATCCCCCCTCCCCATTGCCAATGTTGAGCCCAATTTATCAA
GACTTAAACATCTTTGACAACTCAAAAGCGGTTGTCTTTTCACTTCCAAA
AATAAAGTCTTACCAGAAACTTTTCCTTGGTAACCTTCGTACAACCGATT
CCTAGCGCTGACTTCGCGGTTCGTTACGGCACGGCGCAATTATCCATACC
TTACCCTAGCCGCCCCCCCCCCCCCTTCCCCTTCGGCGAACCTTCTGCAC
CAGAACGCCCGGGGAACGCGATGACAACGATCGCCAAGACCGGCCCGGGA
GCGTTCACCGCGGCCGTTATGCAGTGGATGGTCGAGGCCACCGCCGGGAA
TTCCGAGGCGGCTTGTCATTCCCTTGCAACTGTTTTCGACGGCGGCGATC
GAACAACTCATAGAAGCCATGGTAGACTTGCTGCAGTACTGTCTGGTGAT
GGCGAGGACCGCGGGGCAAAGCTGGAGCCGGAGCCGGAGCCGTCTTCGGT
AATGATTCTGCCGCCCTCTTACTTTTACCCAGTCCCGAACAACGTCGTCG
GTGATCTGGTCGGCGACGGAAGCGACCGCGGTGTCTTCGACCGCACGGGT
CATTACTTTGCACGGGAGTCTCTCGCCGCACACTTATGGGCAAAATCCTG
GCAGTACTCCTAGCACTCGGAGCTGTGTAGTGGGAGATGCTGTACAGTAA
GAGCTATAGTTTTCTATGTAGATTTCAAGCGTTTTGTTCGAGGGAACCGA
AAATTCCACCTCTGCTATATCATTTTCCTCCGAGGACGTACCCGTCGCCA
GCCTATTCATTTTTTCTTGCGTCTTAATATTGTTTTGCTCGAGGACTGAC
TGATTCCTTCCATGGCTGAGATCAAAGCCACGACCTTGAACTCACGACTG
CAATTTTGCGATTTAAAATGCATTACTCCGACTAACTGACTGCCCGAAAT
TGTTAATTTCTTAATTTACTGATAAAATAATGCAGCATCTATTAATAGTT
GCGATTAAGGAGCGCCTCCTTACCAGTGAACCCCCGATTGATGAAAATTT
AGCTCTAGCTACCTCCCACCAGGAGGAATGCTATTAATAATAATGCGCTA
TTACTTCAAAATCCTCTCCGTCTCCGGGAGTATTTCTAACATGTATGTTG
TGTAAGTGCATGTTGCTTTCCACGTGTGTTGGTGATTATGAATGGGCAGT
ATAATACAACCATCATTTATAGCACGCTTGAGAGCTTGTTTCAGAAATGC
TGCATGGCTGACGGCGAATGCTGAGAAATAGCGGTATGTCTTCGGTCTTC
AGTCTGGGGAGCGGGCAGGGTGGAGAAAGAGCGACGCTGCTTAAGGCCAA
CGGCAAAATAATTTCTGCATCATGTGTTTAGTCTTTTAAGTGGTCACCCC
TTCAACGGAACGAGCATCCTCTACGAATTCTGCCCATCCACGCCGTAACG
CTAACGGACACATTCTCTCGCGCGCCCAAGATTGACGGGCGATCGATTTA
GGCCACCTCCGATCAACATCTGTCGACAGCCTCTAGTATTTTTAGCAGTG
TGGTTTACGGT
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1162:158898..164658-

>mRNA_A-nodosum_M_contig1162.22.1 ID=mRNA_A-nodosum_M_contig1162.22.1|Name=mRNA_A-nodosum_M_contig1162.22.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1542bp|location=Sequence derived from alignment at A-nodosum_M_contig1162:158898..164658- (Ascophyllum nodosum dioecious)
ATGACGGCCGGTCCTGAGTCGACGTCACCTCCTCCCTCATTCATTGATCA
ACAGCACAGTTCGAGTGATGGCAAAAAAAATAATGGCAGCCACAGCCATC
GACATTTGTCGCAGGCGCGTGCTCGGCAGCAACAGGAAGGCGGCGAAAAG
GGCAATGCTTCTTCCCTAGCTTCGTCCAACGCACCTCTGTTGCCACCAGA
GTTCAATGCTTGTTTTCCATCTTCGTCTGTGAGTCGGCGTAAAATACGAT
GGGGCTTTTGGTCGCTGAACGATCGCGAATGGATGAAGCTTGTCGAGGAC
AACTACAACATCGGACACCGCGAGGCAGGGACAACATCGTCATTGTCATC
GTCCTCAACAGATGTTCCTTGGTTGATCCCACACACCATTCATCACGTCT
GGCTGGGAGGGGATATACCCCGACGTTTCGCCTTTCTACGCGACACCTGG
AGGTCGAGACATGAGAGCTGGGAGTTGCGCTTGTGGACGGAGGCGGACAT
CGAGTCGTTCGGGCTGGAGAACAAGGAGGCGTACGATGCCGCGGGGAACT
TTGGAGAAAAGTCCGATATCTTGCGTTACGAGATTCTGCTCAGACACGGT
GGACTCTACGTCGATGTGGACTTCCTTTGCCTCGGAGCGTTCGACGATCT
TCACAGGCGTTACGACTTCTACGCCGGGGTTTCTAACACAGGAACGTTCG
AGCTCAACAATGGCCTCGTGGGCTGTTGCCCAGGTCATCCGATTATGCGC
AACGTTGTCAATCGCATCCGGGAGACCTGGAGCGCTCCGCCTGTAACAGT
TGAGGCAAGGAGCTGTCAGGGGGGCCCTCGTGACATCGGAAACAACACGC
CCTGCCTCGTCGCTGGTGCTCTGACGGGTGAATTCACGCCGCTCGCGGGG
GTGGAGGGTGCCAGAATAGGGTCGGTGATGGGGGCTTCAATAAGCGGTTG
CGGCACGGTTTTGGACGGGAAGGAGACGGGGATGAGGGCGGAGGCTGGAG
ATCCGCTCGCAACCCTCATGGGTGCGTTTGGAGACGGTGAAGGACGGGGA
AAGGGAAGAGGAGATGTGAAGGGGCTGCTCGCGGGCCTGCTGGGAGATGA
AGATAGGGCGTGCTTGGCGCAAGCTGTCTTAGAACGCCCGGGGAACGCGA
TGACAACGATCGCCAAGACCGGCCCGGGAGCGTTCACCGCGGCCGTTATG
CAGTGGATGGTCGAGGCCACCGCCGGGAATTCCGAGGCGGCTTGTCATTC
CCTTGCAACTGTTTTCGACGGCGGCGATCGAACAACTCATAGAAGCCATG
GTAGACTTGCTGCAGTACTGTCTGGTGATGGCGAGGACCGCGGGGCAAAG
CTGGAGCCGGAGCCGGAGCCGTCTTCGGTAATGATTCTGCCGCCCTCTTA
CTTTTACCCAGTCCCGAACAACGTCGTCGGTGATCTGGTCGGCGACGGAA
GCGACCGCGGTGTCTTCGACCGCACGGGTCATTACTTTGCACGGGAGTCT
CTCGCCGCACACTTATGGGCAAAATCCTGGCAGTACTCCTAG
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