mRNA_A-nodosum_M_contig1162.17.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1162.17.1
Unique NamemRNA_A-nodosum_M_contig1162.17.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig1162.17.1 vs. uniprot
Match: A0A6H5JQJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQJ8_9PHAE)

HSP 1 Score: 318 bits (814), Expect = 3.190e-92
Identity = 253/634 (39.91%), Postives = 305/634 (48.11%), Query Frame = 3
Query:  372 GSWMIASSRRPAAVSSRPAPTQISSASTK-------LERDVHQLEAEGKLEDVMSKLLKSHSEGSSDADILAHELAQRHPE-ALRARGCPVH---QGKVVATTFSATESSDPALPPSQTRSSLPSGRLASAQRPGHAAPVSAADSNIPLAVDARAFELRDWTTQQGQERGELTPAAADLSPDNNNVSRAELLAGQSLESETDEVEETNDDSDGFQNSTGAESFTPDNPVCPVPAATATG----------GGAEGSET---PWDRGWQASDDFEPPSEGKLPGDA-------------------------------------EVGDM-ASEL--RNFTIAQLNPFDGGIEKEVERGGVVKAGKTRPIYIALRGWVYDASAGRHLYGPSGEYSELAGHDVSKRVARGLRGQGSSREAGKGDLDDLSLEGLSRFEEMTLAGWEDIFVARSYPVVGRVVAIVTPTPPRLFSREELQMFDGRRV--------TSELRNGF----------------------------SLP--------------RGYAVPPIYIGVMDKVFDVSYGGSEFYSEGGAYECLAGRDASRVLAKMSMSPEDVGGLLDYSRLTAKELKNLVDWVQRLEK--KGYPEVGRLEI 1925
            GS +  +SR P + SSR   +  +S ST        LE+   +LEA G L+  M  LL SH +GSS A  LAHEL+QRHP  AL    CP+      + V     A  S DP    +           A +      APV AA +   LA +  A +  D  T   +E  + +  + +         R   L+G+S                         S T   P     A TATG          GG E + T   PW+RGWQ  + F+PP       D                                      +VGD  A++L  RNFT+ QLN FDGG      RGG  +AGK RPIYIAL+G VYDASAGRHLYGP GEYSE AGHD+S+RVA G      S  +    LDDLSLE L RFE+MTL GWED F AR YP +GRVVA   P PPRLFSR EL+ FDGR           +E R G                             SLP                YA  PIY+GV DKVFDVS+GGSEFY EGG YECLAGRDASRVLAKMSM+ ED+ G+LDYS LT +E KNL DWV +L +  KGYP VG +++
Sbjct:   36 GSSIRKASRAPGSSSSRRTGSTGTSTSTHGCSTAAALEKRAEELEAAGDLDGAMEALLASHDQGSSRAVTLAHELSQRHPVGALGGNRCPLSIRSPRRKVGGGVEAGASPDPEASSAXXXXXXXXXXXAVSV----VAPVCAA-ALTSLASEVLADDNNDGVTSVPEEHCKRSLPSGE-------ERRHVTLSGESA------------------------SATAAGPASQSAATTATGALEPGKRIDHGGGEPTTTTLLPWERGWQGREGFKPPPSSSALADTGSSASRDAAGTAAAFGAGLSPSSSSFAETGVQSDDALDVGDAEATKLARRNFTVRQLNAFDGGCSAPRMRGGEARAGKQRPIYIALKGEVYDASAGRHLYGPGGEYSEFAGHDISRRVAHGAS---HSDRSSNTLLDDLSLENLGRFEQMTLRGWEDTFRARGYPSLGRVVA---PPPPRLFSRAELRAFDGRSAHVAGPEYEETERRAGAGREEREVGGGEPGEQVAALGRHEEQPAESLPPEQEAKATANAVCFSNYAARPIYMGVKDKVFDVSFGGSEFYLEGGPYECLAGRDASRVLAKMSMASEDIEGVLDYSCLTDREEKNLADWVAKLGEGGKGYPVVGWIDL 627          
BLAST of mRNA_A-nodosum_M_contig1162.17.1 vs. uniprot
Match: D7FRN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRN9_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 1.690e-78
Identity = 169/323 (52.32%), Postives = 190/323 (58.82%), Query Frame = 3
Query: 1143 GDAEVGDMASELRNFTIAQLNPFDGGIEKEVERGGVVKAGKTRPIYIALRGWVYDASAGRHLYGPSGEYSELAGHDVSKRVARGL-RGQGSSREAGKGDLDDLSLEGLSRFEEMTLAGWEDIFVARSYPVVGRVVAIVTPTPPRLFSREELQMFDGRRVT------------------------------------SELRNGFSLP--------------RGYAVPPIYIGVMDKVFDVSYGGSEFYSEGGAYECLAGRDASRVLAKMSMSPEDVGGLLDYSRLTAKELKNLVDWVQRLEKKGYPEVGRLEI------CGLSF 1940
            GDAE   +    RNFT+ QLN FDGG      RGG  +A K RPIYIAL+G VYDASAGRHLYGP GEYSE AGHD+S+RVA G  R   SS       LDDLSLEGL RFE+MTL GWED F AR YP +GRVVA   P PPRLFSR EL+ FDGR                                        E +   SLP                YA  PIY+GV DKVFDVS+GGSEFY EGG YECLAGRDASRVLAKMSM+ ED+ G+LDYS LT +E KNL DWV++L + G   + R         CG+SF
Sbjct:   24 GDAEATKLVR--RNFTVRQLNAFDGGCSAPRMRGGEARAVKQRPIYIALKGEVYDASAGRHLYGPGGEYSEFAGHDISRRVAHGASRSDRSSSTL----LDDLSLEGLGRFEQMTLRGWEDTFRARGYPSLGRVVA---PPPPRLFSRAELRAFDGRPADVAASEHGETERGAGAGGGEREVGGGEPGEQAAVLARQEEQPAESLPPEQEAKATANAVYFSNYAAQPIYMGVKDKVFDVSFGGSEFYLEGGPYECLAGRDASRVLAKMSMASEDIEGVLDYSCLTDREEKNLADWVEKLGEGGKGYLPRHPTDRPGVRCGISF 337          
BLAST of mRNA_A-nodosum_M_contig1162.17.1 vs. uniprot
Match: A0A7S1ZS28_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZS28_TRICV)

HSP 1 Score: 184 bits (468), Expect = 4.370e-49
Identity = 108/256 (42.19%), Postives = 146/256 (57.03%), Query Frame = 3
Query: 1161 DMASELRNFTIAQLNPFDGGIEKEVERGGVVKAGKTRPIYIALRGWVYDASAGRHLYGPSGEYSELAGHDVSKRVARGLRGQGSSREAGKGDLDDLSLEGLSRFEEMTLAGW-EDIFVARSYPVVGRVV-AIVTPTPPRLFSREELQMFDGRRVTSELRNGFSLPRGYAVPPIYIGVMDKVFDVSYGGSEFYSEGGAYECLAGRDASRVLAKMSMSPEDVGGLLDYSRLTAKELKNLVDWVQRLE-KKGYPEVGRL 1919
            D    L NFT  QL  FDGG +   ++ G       +P+Y++++G VYDAS GRHLYGP G +   AG +    +ARG   Q         DLD++S + LS  E+  L GW E +  +  YPV+GR++     P+  R+ S+EEL  +DG+           +P GYA  PIY+    KV+D+S+GG  FY +GGAY C AG+DASR LAKMS+ P D       S L+ KE+K L DWV+  E +K YP VGRL
Sbjct:   11 DEPDPLNNFTSVQLLHFDGGEDSVGKKKG------EKPVYLSVKGVVYDASKGRHLYGPGGPFEVYAGRECGAALARGSLDQS--------DLDNISCDDLSMNEQTELEGWVERLKSSLCYPVLGRLIPGDALPSEDRVVSKEELAQYDGKIQ--------DIPEGYAAAPIYLAAKGKVYDMSFGGVSFYGKGGAYNCFAGKDASRALAKMSLDPADTENT-STSDLSEKEIKVLNDWVKTFEERKKYPCVGRL 243          
BLAST of mRNA_A-nodosum_M_contig1162.17.1 vs. uniprot
Match: A0A7S0CLZ8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CLZ8_9STRA)

HSP 1 Score: 173 bits (439), Expect = 1.290e-44
Identity = 111/269 (41.26%), Postives = 149/269 (55.39%), Query Frame = 3
Query: 1125 SEGKLPGDAEVGDMASELRNFTIAQLNPFDGGIEKEVERGGVVKAGKTRPIYIALRGWVYDASAGRHLYGPSGEYSELAGHDVSKRVARGLRGQGSSREAGKGDLDDLS-LEGLSRFEEMTLAGWEDIFVA-RSYPVVGRVVAIVTPTPP-RLFSREELQMFDGRRVTSELRNGFSLPRGYAVPPIYIGVMDKVFDVSYGGSEFYSEGGAYECLAGRDASRVLAKMSMSPEDVGGLLDYSRLTAKELKNLVDWVQRL-EKKGYPEVGRL 1919
            S+G    D    D     RN+T AQL  F+G I+K        +   T+ +Y++L G V+D + G++ YGP G Y   AGH+     A+               LDD+   E L+  E+  L GW + F   R+YPV G ++     +P  R+ S+EE+   DG        NG ++P GYAV PIYIGV ++VFDVS+GG EFY +GGAYE  AG+DASR LAKMS  P D     D S L+ KELK L DWV+   E+KGYP VG++
Sbjct:   45 SKGSKSNDETEDDGPEPARNYTEAQLLKFNGSIDK------TGRFEVTQQVYLSLNGTVFDVTEGKNFYGPGGPYELFAGHECGVAFAK--------MSFDNDHLDDMDGCEKLTNSEKHELIGWMEKFTYYRAYPVKGSLIPNNKLSPSDRILSKEEIAKHDG--------NG-TVPEGYAVAPIYIGVGERVFDVSFGGVEFYGKGGAYERFAGKDASRALAKMSFDPADTANT-DTSDLSEKELKVLNDWVKTFDERKGYPVVGKI 289          
BLAST of mRNA_A-nodosum_M_contig1162.17.1 vs. uniprot
Match: A0A7S4NEZ3_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NEZ3_9STRA)

HSP 1 Score: 159 bits (403), Expect = 6.450e-40
Identity = 107/271 (39.48%), Postives = 140/271 (51.66%), Query Frame = 3
Query: 1131 GKLPGDAEVGDMASEL----RNFTIAQLNPFDGGIEKEVERGGVVKAGKTRPIYIALRGWVYDASAGRHLYGPSGEYSELAGHDVSKRVARGLRGQGSSREAGKGDLDDLSLEGLSRFEEMTLAGWEDIF-VARSYPVVGRVVAIVT-PTPPRLFSREELQMFDGRRVTSELRNGFSLPRGYAVPPIYIGVMDKVFDVSYGGSEFYSEGGAYECLAGRDASRVLAKMSMSPEDVGGLLDYSRLTAKELKNLVDWVQRL-EKKGYPEVGRLE 1922
            G    D EV + A E     RNFT  QL  FDG  ++        K G+ +P+Y+A++G V+D S+GR  YGP G Y   +GH+    +A+            +  +DD S E L+  E+  L GW + F   RSYPV GR+V   + P   +  S EEL   DG            +P GYA  PIY+    KVFDVS+GG  FY + GAY   AG DASR LAKMS  P D+      + LT KE K L DW++   E+K YP VG L+
Sbjct:   36 GSGRNDVEVEEEAVEEEEPPRNFTAMQLKHFDGTKDE--------KTGEDKPVYLAVKGIVFDVSSGRDFYGPGGAYEMFSGHECGVALAK--------MSFDEKYIDDFSWESLNFGEKTELDGWIEKFQYYRSYPVKGRLVPEKSIPPSDKTVSTEELAKNDG---------SMEIPEGYAAAPIYVAAGGKVFDVSFGGVTFYGKDGAYSSFAGVDASRALAKMSFDPSDIENPT-INDLTEKEKKCLDDWIKTFGERKQYPVVGILK 280          
BLAST of mRNA_A-nodosum_M_contig1162.17.1 vs. uniprot
Match: A0A7S3Y4U5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4U5_HETAK)

HSP 1 Score: 158 bits (400), Expect = 1.670e-39
Identity = 106/247 (42.91%), Postives = 130/247 (52.63%), Query Frame = 3
Query: 1179 RNFTIAQLNPFDGGIEKEVERGGVVKAGKTRPIYIALRGWVYDASAGRHLYGPSGEYSELAGHDVSKRVARGLRGQGSSREAGKGDLDDLSLEGLSRFEEMTLAGWEDIFVA-RSYPVVGRVVAIVTPTPPRLFSREELQMFDGRRVTSELRNGFSLPRGYAVPPIYIGVMDKVFDVSYGGSEFYSEGGAYECLAGRDASRVLAKMSMSPEDVGGLLDYSRLTAKELKNLVDWVQRLE-KKGYPEVG 1913
            RNFT  QL  +DG  E E             PIY+ALRG V+D S+    YG  G Y+  AGHD ++ +A+       S E  + DL+  S EG S  E  +L GW   F   + YP+VGRVV    P  PR  SREELQ         E+R   + P GYA  PI I V   V+DVS+GG  FY EG AY   AG+DASR LAKMS   EDV    +   L+ KELK L DW    + +K YP +G
Sbjct:   65 RNFTFEQLKKYDGSEEDE-------------PIYVALRGVVFDVSSAPTHYGKDGAYNLFAGHDATRNLAK------MSFE--EDDLNKPSTEGFSVSEIDSLDGWYTTFKEYKQYPIVGRVVE---PPKPRKISREELQ---------EMRGKQTCPEGYATAPICISVKGNVYDVSFGGVTFYMEGAAYHLFAGKDASRALAKMSFKDEDVNST-ELKDLSEKELKVLDDWENTFKNRKKYPIIG 277          
BLAST of mRNA_A-nodosum_M_contig1162.17.1 vs. uniprot
Match: A0A836C9I0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9I0_9STRA)

HSP 1 Score: 154 bits (388), Expect = 7.180e-38
Identity = 101/252 (40.08%), Postives = 128/252 (50.79%), Query Frame = 3
Query: 1176 LRNFTIAQLNPFDGGIEKEVERGGVVKAGKTRPIYIALRGWVYDASAGRHLYGPSGEYSELAGHDVSKRVARGLRGQGSSREAGKGDLDDLSLEGLSRFEEMTLAGWEDIFVA-RSYPVVGRVVAIVTPTPPRLFSREELQMFDGRRVTSELRNGFSLPRGYAVPPIYIGVMDKVFDVSYGGSEFYSEGGAYECLAGRDASRVLAKMSMSPEDVGGLLDYSRLTAKELKNLVDWVQRLEKKGYPEVGRLEIC 1928
            LRNFT+ QL  F G   K  +   V       PIY+ALRG V+D S  RH YG  G Y   AGHD S  +AR       S +A   DL+ ++ E LS  E  TL GW   F   + YP+VGRVV    P P  ++++E+L    G            +P G A  P+ + V  KVFDVSYGG+  Y +G  Y    GRDASR LAKMS   E++      + L+  E+  + DW  R EKKGY  VG    C
Sbjct:   60 LRNFTLEQLKAFTGVNAKGEDDEDV-------PIYVALRGEVFDVSQARHAYGKEGNYHIFAGHDASVSLAR------HSLDAS--DLNKMTWEELSHGERDTLDGWIQQFRDYKGYPMVGRVVTAPLPDPLPVYTKEQLAAGTGEGP---------IPDGAAAAPMLVAVAGKVFDVSYGGAPHYGKGCPYNLFVGRDASRALAKMSFDAENLDNP-SIADLSLAEVGVMNDWAARFEKKGYRVVGTYPTC 286          
BLAST of mRNA_A-nodosum_M_contig1162.17.1 vs. uniprot
Match: A0A6H5JR28_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR28_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 1.040e-31
Identity = 75/123 (60.98%), Postives = 88/123 (71.54%), Query Frame = 3
Query: 1176 LRNFTIAQLNPFDGGIEKEVERGGVVKAGKTRPIYIALRGWVYDASAGRHLYGPSGEYSELAGHDVSKRVARGLRGQGSSREAGKGDLDDLSLEGLSRFEEMTLAGWEDIFVARSYPVVGRVV 1544
            LR+FTIA+LN FDGG E  + R       K  PI+I+L G VYDAS GR +YGPSGE +  AGHDVS+ VARGL    +S++ GK DLDDLSL GL+R E MTLAGWE+ F A  YPVVGRVV
Sbjct:  177 LRDFTIAELNTFDGG-ESPLSR-------KPHPIFISLGGTVYDASNGRGIYGPSGELAAFAGHDVSRWVARGLV---ASKDDGKSDLDDLSLTGLNRIERMTLAGWEERFKACGYPVVGRVV 288          
BLAST of mRNA_A-nodosum_M_contig1162.17.1 vs. uniprot
Match: A0A7S3USF5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USF5_HETAK)

HSP 1 Score: 136 bits (342), Expect = 5.020e-31
Identity = 92/252 (36.51%), Postives = 122/252 (48.41%), Query Frame = 3
Query: 1179 RNFTIAQLNPFDGGIEKEVERGGVVKAGKTRPIYIALRGWVYDASAGRHLYGPSGEYSELAGHDVSK-----RVARGLRGQGSSREAGKGDLDDLSLEGLSRFEEMTLAGWEDIFVA-RSYPVVGRVVAIVTPTPPRLFSREELQMFDGRRVTSELRNGFSLPRGYAVPPIYIGVMDKVFDVSYGGSEFYSEGGAYECLAGRDASRVLAKMSMSPEDVGGLLDYSRLTAKELKNLVDWVQRL-EKKGYPEVG 1913
            RNFT  QL  F G                  PI IA+ G V+D S  R  +GP G+YS LAG D+S      R+  GL G             D +   L++ E   L  W  ++   + +P+ GR+VA   P P R F++ EL  + GR+           P GYA  PI +GV  +V+DVS+GG +FY EG  Y   AGRDASR LA++S +  D+G   +   L  KE   L DW +    KK YP VG
Sbjct:  139 RNFTHQQLERFTGE--------------DNSPILIAINGDVFDVSRSRRFFGPGGQYSMLAGRDISVCLAKLRLEEGLLGA------------DPATAALTKKERRDLRSWHKVYGGYKEFPLAGRLVA---PPPARAFAKAELMSYTGRQPA---------PAGYARAPILVGVAGRVYDVSFGGWQFYGEGAPYHLFAGRDASRALARLSFAAADLGSP-ELGDLGEKERGVLADWERTFARKKRYPVVG 351          
BLAST of mRNA_A-nodosum_M_contig1162.17.1 vs. uniprot
Match: A0A7S2R2U9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2U9_9STRA)

HSP 1 Score: 133 bits (334), Expect = 2.370e-30
Identity = 89/266 (33.46%), Postives = 132/266 (49.62%), Query Frame = 3
Query: 1179 RNFTIAQLNPFDGGIEKEVERGGVV--KAGKTRPIYIALRGWVYDASAGRHLYGPSGEYSELAGHDVSKRVARGLRGQGSSREAGKGDLDDLSLEGLSRFEEMTLAGWEDIFV-ARSYPVVGRVVAIVT-PTPPRLFSREELQMFDGR--------------RVTSELRNGFSLPRGYAVPPIYIGVMDKVFDVSYGGSEFYSEGGAYECLAGRDASRVLAKMSMSPEDVGGLLDYSRLTAKELKNLVDWVQRLE-KKGYPEVGRL 1919
            RNFT  QL  +DG +++ + +  V+  ++   +P+Y++L+G V+D S   + YGP G Y   AG +    +A+      S  +    +  D SL  L+  E   LA W   F   R YP++GR+V+    P P RL ++++L   DG                          +P GY   PIY+GV   VFDVS+GG E+Y +G  Y   AG+D SR LAKMS+   ++     +  L  KE K L DW    + K+ YP VG+L
Sbjct:   59 RNFTSEQLAYYDGTVDETIPKRKVLVKESDNKKPVYLSLKGIVFDVSEATNFYGPGGPYESFAGRECGMALAKRNMYDASLLD----EAVDSSL--LNEKERTQLAEWIHKFQKVRCYPIMGRLVSSSQLPDPDRLLTKDDLLANDGTIHXXXXXXXXXXXXXXXXXXXGDVVIPEGYGTVPIYLGVDGTVFDVSFGGLEYYGKGCPYHPFAGKDVSRALAKMSLDVAEIDNCAVHD-LNEKECKTLKDWKTSFQDKRKYPIVGQL 317          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1162.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQJ8_9PHAE3.190e-9239.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRN9_ECTSI1.690e-7852.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1ZS28_TRICV4.370e-4942.19Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S0CLZ8_9STRA1.290e-4441.26Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S4NEZ3_9STRA6.450e-4039.48Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S3Y4U5_HETAK1.670e-3942.91Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A836C9I0_9STRA7.180e-3840.08Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JR28_9PHAE1.040e-3160.98Cytochrome b5 heme-binding domain-containing prote... [more]
A0A7S3USF5_HETAK5.020e-3136.51Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2R2U9_9STRA2.370e-3033.46Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1162contigA-nodosum_M_contig1162:131351..136583 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FRN9
PFAMsCyt-b5
Model size3258
Max annot lvl2759|Eukaryota
KEGG koko:K17278
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0005488,GO:0005496,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006066,GO:0006629,GO:0006694,GO:0006696,GO:0008047,GO:0008150,GO:0008152,GO:0008202,GO:0008204,GO:0008289,GO:0008610,GO:0009058,GO:0009889,GO:0009987,GO:0012505,GO:0016020,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0019216,GO:0019218,GO:0019222,GO:0020037,GO:0030234,GO:0031323,GO:0031326,GO:0031984,GO:0032443,GO:0042175,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044093,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046165,GO:0046890,GO:0046906,GO:0048037,GO:0050789,GO:0050790,GO:0050794,GO:0050810,GO:0062012,GO:0065007,GO:0065009,GO:0071704,GO:0080090,GO:0097159,GO:0097384,GO:0098772,GO:0098827,GO:0106118,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:1902930
Exons2
Evalue2.14e-83
EggNOG OGsKOG1110@1|root,KOG1110@2759|Eukaryota
Ec32 ortholog descriptionCytochrome b5-like heme/steroid binding domain
Ec32 orthologEc-00_003270.1
Descriptionsteroid binding
Cds size1746
COG categoryCH
BRITEko00000,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866567.812434-UTR-A-nodosum_M_contig1162:131350..1315591680866567.812434-UTR-A-nodosum_M_contig1162:131350..131559Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1162 131351..131559 +
1680866567.851995-UTR-A-nodosum_M_contig1162:135280..1365831680866567.851995-UTR-A-nodosum_M_contig1162:135280..136583Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1162 135281..136583 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866567.828433-CDS-A-nodosum_M_contig1162:131559..1326871680866567.828433-CDS-A-nodosum_M_contig1162:131559..132687Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1162 131560..132687 +
1680866567.8399649-CDS-A-nodosum_M_contig1162:134662..1352801680866567.8399649-CDS-A-nodosum_M_contig1162:134662..135280Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1162 134663..135280 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1162.17.1prot_A-nodosum_M_contig1162.17.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1162 131560..135280 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1162.17.1

>prot_A-nodosum_M_contig1162.17.1 ID=prot_A-nodosum_M_contig1162.17.1|Name=mRNA_A-nodosum_M_contig1162.17.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=582bp
MLWRSCWSTAVRATYVIVLRSVWTKIENLMCSATEIAAFLRQVQILVAIG
DRQLGSWMIASSRRPAAVSSRPAPTQISSASTKLERDVHQLEAEGKLEDV
MSKLLKSHSEGSSDADILAHELAQRHPEALRARGCPVHQGKVVATTFSAT
ESSDPALPPSQTRSSLPSGRLASAQRPGHAAPVSAADSNIPLAVDARAFE
LRDWTTQQGQERGELTPAAADLSPDNNNVSRAELLAGQSLESETDEVEET
NDDSDGFQNSTGAESFTPDNPVCPVPAATATGGGAEGSETPWDRGWQASD
DFEPPSEGKLPGDAEVGDMASELRNFTIAQLNPFDGGIEKEVERGGVVKA
GKTRPIYIALRGWVYDASAGRHLYGPSGEYSELAGHDVSKRVARGLRGQG
SSREAGKGDLDDLSLEGLSRFEEMTLAGWEDIFVARSYPVVGRVVAIVTP
TPPRLFSREELQMFDGRRVTSELRNGFSLPRGYAVPPIYIGVMDKVFDVS
YGGSEFYSEGGAYECLAGRDASRVLAKMSMSPEDVGGLLDYSRLTAKELK
NLVDWVQRLEKKGYPEVGRLEICGLSFEQET*
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mRNA from alignment at A-nodosum_M_contig1162:131351..136583+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1162.17.1 ID=mRNA_A-nodosum_M_contig1162.17.1|Name=mRNA_A-nodosum_M_contig1162.17.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5233bp|location=Sequence derived from alignment at A-nodosum_M_contig1162:131351..136583+ (Ascophyllum nodosum dioecious)
CTACAAACTCCGTAATTAAACTCGGAGACAGAAGCAGCAACCTTTTTCCA ATTTATCTTATATCCAAGAGTTTTCGTACAACAGTGGGTGACAGCCGCGA CAACCTCCCTTTCCCGCCGCACTCTTATGCTGACATCAAGAGGGATGCCT GGTAACGAATAGCAGAAGCAGTGACAAAATTATCCTACCAGTATAATATC GTACCGAAAATGCTGTGGCGTTCTTGCTGGAGTACTGCGGTAAGGGCGAC GTATGTAATAGTCCTGCGATCCGTTTGGACAAAGATAGAGAATTTAATGT GCAGTGCCACAGAGATCGCCGCATTTTTACGTCAAGTACAAATACTTGTA GCAATAGGTGATAGACAACTTGGGAGTTGGATGATCGCTAGCTCGAGGCG GCCCGCCGCCGTGTCTTCCAGGCCAGCACCGACTCAGATCAGCAGCGCCT CGACGAAGCTGGAGAGAGATGTACATCAGCTCGAGGCAGAGGGTAAATTG GAAGATGTTATGTCGAAGTTACTCAAGAGCCACTCCGAAGGTTCTTCTGA TGCTGACATCCTGGCTCACGAGCTCGCGCAACGTCACCCGGAAGCGCTCC GTGCCAGGGGATGTCCAGTACACCAAGGCAAAGTGGTGGCCACAACTTTT TCGGCAACCGAGAGCAGTGATCCTGCACTCCCACCCTCGCAAACCCGTTC GAGCTTGCCATCGGGCAGGCTCGCAAGTGCACAGCGTCCAGGACACGCCG CTCCTGTTTCAGCAGCGGACTCGAACATCCCGCTTGCTGTTGACGCCAGA GCATTCGAGCTGCGCGATTGGACCACGCAGCAGGGTCAGGAACGTGGGGA GCTTACTCCGGCCGCGGCTGACCTTTCGCCAGATAATAATAACGTGAGCA GAGCCGAGCTCCTCGCTGGCCAATCGCTAGAGTCAGAAACGGACGAGGTC GAAGAGACGAACGATGATAGTGATGGCTTTCAAAACAGTACTGGCGCTGA ATCGTTCACCCCAGACAATCCTGTTTGCCCTGTTCCGGCCGCGACTGCGA CGGGGGGCGGGGCGGAAGGGAGCGAAACTCCTTGGGACCGGGGTTGGCAG GCGTCCGACGATTTTGAGCCACCTTCCGAGGGCAAGCTTCCGGGTGACGC CGAAGTCGGTGACATGGCGTCAGAACTTCGGAACTTTACGATTGCTCAAC TGAACCCTTTCGATGGTGGCATCGAAAAAGAGGTCGAGCGAGGAGGGGTT GTGAAGGCGGGGAAAACGAGGCCGATCTACATTGCGCTGCGGGGCTGGGT GTACGACGCCTCTGCCGGTAGACATCTTTACGGCCCGGTGAGCATAGAAC GATCGATTTGCGAGAGCGTCTCATGATTTACACCGCGGGAGGCGGGTGTA CATGATTCACCTTGATCTTTTTATCATATGGAGTATTATACGGTACAAGT ATTAGCTCTACACATACGGATGTATGTGTAGTCATCACATTATATGTATG CATGTATTTATTAAATTGCACATAACCACGCAATCCGGCCCTGTCATCCT AGTCATTCTATGCCACTCGCGTTGATCCTCCTGAGGTATGTATGTATGGT CATCACATATAGCAGAGTATGGATCAACCGGGTAAGGTTGCCAATCCTGC TCGTGGTCAGCTGAACAGGGAAAATAATATTCCCCTGTCCCCGTGCGTGC CTGAGAATTTGGTCTCGCGAGACGGGTTCAGCCGTCCCGTCCCGCGTCAG CCTGCTCATCTCCATACTCAGGCTGAATCTGGTGCTTACTTACGGGATTC CTCCCGAGTTCCGCGGCGGCGTCCATTTATGAAACCACCATACGCCATCG GGTCAGTCCCGAGTTTATCGGGTCACGCAATTGCGTACCGATGGCGTTCA CTGCCGAGAATGGATCAACCGGTAAGGTTGCCAATCCTGCTTGAGGTCAG CTGAACAGGGAAAATGAATACTCAGTATTGCCCTGTCCTCGTACGTGGCT GAGAATTTGGTCTCGCGGAACGGGTTCAGCCGTCCCATCCCGCGTCAGCC TGTTCATTCTCCATACTCAGGCTAGATCTGGTGATTACTCGCGGGATTCC TACTGATTTCCGCGGCGGCGTCAATTTATTCATTTAAACCGCCATACGCC ATTGGGTCAATGCCGACTTTATCGGGTCGCGCAATTATTGCGTACCACTG ACGTTCACTGTCGAGAGTCCGCCGGCATAGGGTCAGTAGTCCTCAAGGTT GTTCCAGTAACGGGTGCTGCCATTTTGCAGGACCATGGATCAATTAATAT ACCGTACCACTGACGTTCACTGCCGAGAGTCCGCCGGCACAGGGTCAGTA GTCTTCAAGGTTGTTCCAGTAACGGGTGCTGCCATTTTGCAGGACCATGG ACCAATTAATATGCGCCTCTCTTCTCCCACACCCACTAATGTGGTATGAA GTGGGCATGTTGAAAGAAGGCGGAATATGGTGTTGTACTACGTACATAGT GCTCTCTGTACACGTCATTTTCAGGATTTTTGTCGCGGTCGAGCGCATCT CCGAATGGAAGAGGTTTTGTATTTGCAGCCTATGGTCCCACCTAAACGTT TTGACATTTTTTCCCCCTGTCTGGGGGATGCCCAGAAGGTTTAGGTGCGT TCAGACTTTTCTTTTAAATACTACCAGTATCTTACTAGAGCTCTGTCGCC ACGACTGTTGTCTTTCTCGAAAGACAAAGCGAAGGTTTAAAATAAAATCT GATCAAGTACCACAGTATTCTTCGTATATTATGAGGGTACTACCCCCTTA GAACGGTCCGGAACAGCGGGGTGCAAATACCCTATAAACTATCAACTACC TGGTATTAACTACTAAAGCGCACAGCACCTATCGTTCGCCGAGACTCGCA CAAGCGGGAAGGCGACGTATGCACTCTCCACGCGGACAGTTGAGGGATCC CAGTGGTGAGTTCGTATCATCTGTGATTAGTCCCTCGGCTTTTTTCACGG TATACAAGATCGTAGAAACTGTTTTCTCTGCTTCAACAAACGTTTTGACA TTTTTCCTCCCTAACCGGGGGATGCTCAGAAGGTCGAGGTGCGCTCTGAT TTTTCTTCAAACTCATGAAGAGGTTAGAATGTCTAGATGCGTCCAGAATT TTCTTTAAACTCGTGAAGAGGTTTGTATTTGCAGCCTTTGATCCCACCTG AGCGTTTTGATATTTTTTTTCCTGTGTGGGATGCTCACAAGGTCTAGATG CGTTCAGATTTTTCTTTAAACTCACCCTGCCCCCTACTACTACTGTACCG TGTTTTTGTTAGAGTGGCGAGTACTCCGAGCTCGCTGGCCACGACGTCTC CAAGCGCGTCGCTCGAGGTCTTCGGGGGCAAGGTTCGTCACGTGAAGCTG GCAAAGGCGACTTGGACGATCTCTCGCTCGAAGGACTGAGTCGATTCGAG GAGATGACCCTGGCTGGCTGGGAAGACATATTTGTCGCGCGCAGCTACCC GGTCGTGGGCAGGGTAGTCGCCATCGTCACCCCGACGCCGCCCCGGTTGT TTTCTCGCGAAGAGTTGCAAATGTTTGACGGGCGCCGCGTTACCTCGGAA CTTCGGAACGGCTTTTCATTGCCTAGGGGTTATGCCGTGCCCCCGATCTA CATCGGGGTGATGGACAAGGTTTTCGACGTTTCCTACGGCGGCTCGGAGT TTTACTCGGAAGGTGGCGCGTACGAGTGCCTCGCGGGAAGGGATGCTTCG CGCGTACTGGCGAAAATGTCCATGTCGCCGGAGGACGTCGGGGGCTTGTT GGACTACAGCCGCTTGACGGCCAAAGAATTAAAAAACCTGGTTGACTGGG TGCAGAGGCTTGAAAAAAAGGGTTATCCCGAGGTCGGCCGTCTCGAGATC TGCGGTTTATCGTTCGAGCAAGAGACCTAAGCTTGGTAGTAGCCCCTATG CGGTGTTCTGTCTTGCTTCTTTTCTCATTGTTCGCCGTTCGAAACACGTC CTAGGCAGCGTCTGAGCCGTCGACAGTCTGCACTAACACCTATGGTTTCG ACCACCAGCTTTAACGCCTGTTTGTGTGTCTTAATAACGAGACTCTAGAG TTTGGACCACGGCCGGCCCGCCAGCTTCAAGGGGCGATTACAGCGTGGCT TTGGCCAAGATGCAAGCGAAGGGGTAGATCGTCGAGATCGACCACGCAGC ATAATTTTTTAACGAGATAGGACAGCGTTGTTGGTTGACGCTCGAAGGGA CAAAACATTTTTCGGTACACGGGTGTTTTTTGTCATGCACACCCTTTACG GCTATAGGGCGCGACTCGATAGGAAATAGAAATAACATATTTTGCACCAA GGGGTAGATGGTCGAGATCGACCATGCAACATAGTTTTAACGAGATGGGA CAGCGTTGTTGTTTGACGCTCGAAGGGACAAACATTTTTCGGTACATGGG TATTTTTTGTCATGCACACCCTTTACGGCTATAGGGCGCGACTCGATAGG AAATAGAAATAACATATTTTGCGCCTCTTGAGGATTTTCCGCCTACAACA CTAGACTGTGTGCTAAGTTCAAAACACGCCGGTGTGTGGTTTCCGCTTAA AAACGACGCATTTTTGGAGGGCCCGCACACAGTATTTTGGCTTCAAAATC GCATATCGAGTCGTGGTCTTGAGCTAACTGCGGAATGTGTCTTATTAGCT GCTAACGCACGGTATCCCACGCCCCATGCATTTGTTGTTGACCTTGTGAT GCCGTAGAACATCGATTAATATCTCGGCTAAGCCTGTCGCATTGCCATTG CGTTATTGTACTCATCATGTTTGATTTGTGAACCTCTGAGAGGGCACTTT GAACAAACAATTTTTTGGGACCGTGATCGTAAACGACGCACACCGTATTT TGGCTTCAAAATCGCATATCGAGTCGTAATCTTGAGTGTTAGTAGAGCAG TTAGCGCACGGTATCCCTCTCCCCATGCCTTTGCTGTTGACCCTGTGATG CCATAAAACATCTACGAATATCTCGGCTAAGTCTGTCGCATTGTCACTTC ATTATTGTACAGTCTCTTGTATAATTTGTGAATCTCTGAGTGGGCACTTA GAACAAACAAAATTCGTGTGGCCGTGATCGTAGACCTTCGTTCCAAGGGG GCGGGACCACAGGGGGTCTTCTCGGTGCAAACTGGAAAGTGCTGCTGCAT GTTGCGTTGATCTTCGATCTCACTTCATCTACT
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1162:131351..136583+

>mRNA_A-nodosum_M_contig1162.17.1 ID=mRNA_A-nodosum_M_contig1162.17.1|Name=mRNA_A-nodosum_M_contig1162.17.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1746bp|location=Sequence derived from alignment at A-nodosum_M_contig1162:131351..136583+ (Ascophyllum nodosum dioecious)
ATGCTGTGGCGTTCTTGCTGGAGTACTGCGGTAAGGGCGACGTATGTAAT
AGTCCTGCGATCCGTTTGGACAAAGATAGAGAATTTAATGTGCAGTGCCA
CAGAGATCGCCGCATTTTTACGTCAAGTACAAATACTTGTAGCAATAGGT
GATAGACAACTTGGGAGTTGGATGATCGCTAGCTCGAGGCGGCCCGCCGC
CGTGTCTTCCAGGCCAGCACCGACTCAGATCAGCAGCGCCTCGACGAAGC
TGGAGAGAGATGTACATCAGCTCGAGGCAGAGGGTAAATTGGAAGATGTT
ATGTCGAAGTTACTCAAGAGCCACTCCGAAGGTTCTTCTGATGCTGACAT
CCTGGCTCACGAGCTCGCGCAACGTCACCCGGAAGCGCTCCGTGCCAGGG
GATGTCCAGTACACCAAGGCAAAGTGGTGGCCACAACTTTTTCGGCAACC
GAGAGCAGTGATCCTGCACTCCCACCCTCGCAAACCCGTTCGAGCTTGCC
ATCGGGCAGGCTCGCAAGTGCACAGCGTCCAGGACACGCCGCTCCTGTTT
CAGCAGCGGACTCGAACATCCCGCTTGCTGTTGACGCCAGAGCATTCGAG
CTGCGCGATTGGACCACGCAGCAGGGTCAGGAACGTGGGGAGCTTACTCC
GGCCGCGGCTGACCTTTCGCCAGATAATAATAACGTGAGCAGAGCCGAGC
TCCTCGCTGGCCAATCGCTAGAGTCAGAAACGGACGAGGTCGAAGAGACG
AACGATGATAGTGATGGCTTTCAAAACAGTACTGGCGCTGAATCGTTCAC
CCCAGACAATCCTGTTTGCCCTGTTCCGGCCGCGACTGCGACGGGGGGCG
GGGCGGAAGGGAGCGAAACTCCTTGGGACCGGGGTTGGCAGGCGTCCGAC
GATTTTGAGCCACCTTCCGAGGGCAAGCTTCCGGGTGACGCCGAAGTCGG
TGACATGGCGTCAGAACTTCGGAACTTTACGATTGCTCAACTGAACCCTT
TCGATGGTGGCATCGAAAAAGAGGTCGAGCGAGGAGGGGTTGTGAAGGCG
GGGAAAACGAGGCCGATCTACATTGCGCTGCGGGGCTGGGTGTACGACGC
CTCTGCCGGTAGACATCTTTACGGCCCGAGTGGCGAGTACTCCGAGCTCG
CTGGCCACGACGTCTCCAAGCGCGTCGCTCGAGGTCTTCGGGGGCAAGGT
TCGTCACGTGAAGCTGGCAAAGGCGACTTGGACGATCTCTCGCTCGAAGG
ACTGAGTCGATTCGAGGAGATGACCCTGGCTGGCTGGGAAGACATATTTG
TCGCGCGCAGCTACCCGGTCGTGGGCAGGGTAGTCGCCATCGTCACCCCG
ACGCCGCCCCGGTTGTTTTCTCGCGAAGAGTTGCAAATGTTTGACGGGCG
CCGCGTTACCTCGGAACTTCGGAACGGCTTTTCATTGCCTAGGGGTTATG
CCGTGCCCCCGATCTACATCGGGGTGATGGACAAGGTTTTCGACGTTTCC
TACGGCGGCTCGGAGTTTTACTCGGAAGGTGGCGCGTACGAGTGCCTCGC
GGGAAGGGATGCTTCGCGCGTACTGGCGAAAATGTCCATGTCGCCGGAGG
ACGTCGGGGGCTTGTTGGACTACAGCCGCTTGACGGCCAAAGAATTAAAA
AACCTGGTTGACTGGGTGCAGAGGCTTGAAAAAAAGGGTTATCCCGAGGT
CGGCCGTCTCGAGATCTGCGGTTTATCGTTCGAGCAAGAGACCTAA
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