mRNA_A-nodosum_M_contig116.48.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig116.48.1 vs. uniprot
Match: D8LKX6_ECTSI (Similar to ubiquitin specific protease 48 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKX6_ECTSI) HSP 1 Score: 383 bits (983), Expect = 1.120e-112 Identity = 223/447 (49.89%), Postives = 264/447 (59.06%), Query Frame = 1
Query: 1 DHVRRKNCANNPRCLYGLGEGKQGIWSSNPGLLVTLGEDPSGMIKALPAVETPSNGSNKMPAGGVFEKGDVL---PPPPNRRLPAGLKNLGATCYLNSQLQALYANKDFRRGVYAWRSSRRGRLFAAGDMGSPAEANSPDGGRSNRTGCSSAAGVY---------SGVLPGGTELSEIAFVGVGGNSTEAFYGDDKDENIMEELQLVFGHMQEGLAKVYDPARFATLLGIDKGIQQDPQEFNKLFMSLLERCLQRSALPLRSLVRGLFSGELAYVTRCSKCKFASRNMNAFNELELQIGSNRTIDKCLDSFLEAESLDGDNQYLCEKCGRKQDAVRAIELHRLPPVISIQLLRYVYDARTGQRKKIKTPMALATTLDMGPRLGPQGEAR----ASSGSGSTANAGN---------CVYRLACVLYHKGSNVHSGHYIAEVPCKRGFR 1266
DHVR+KNC+NNPRCLYGLGEGK+GIWS P L+ LGED SGM+K LP+ T + G GD + PPP +R P GLKNLGATCYLNSQLQAL+ANK FR GV++WR S A G+ GS A + + + V A GV E D IM ELQ+VFGHMQEG++KVYDPA F LL +D G QQDPQEF+ F LLERC QRS PLR+LV+ F GE+AY+TRC KCK R FN+L LQI +R+I+ LD LE E L G NQY CEKCG+KQDA EL RLPPV+S+QL+RY YD +T +KKIK ++L TLDMGPRLGP+G+ G G + G VY L CVLYHKGSNVHSGH +AE G R
Sbjct: 14 DHVRKKNCSNNPRCLYGLGEGKEGIWSRKPALIAALGEDMSGMVKELPSEST--RAATAAAGGSSAGPGDAVVPFPPPRMQRQPTGLKNLGATCYLNSQLQALFANKAFRDGVFSWRPSVPA---AGGEGGSSARGSGANXXXXXXXXXXXXXXXXXXXXXXXXATWVXXXXXXXXRAAGEGVDSVDLEVA---SSDNAIMRELQMVFGHMQEGISKVYDPAGFPALLRMDTGSQQDPQEFSNFFRILLERCFQRSPTPLRTLVQDTFCGEVAYITRCLKCKAGPRQQRTFNDLVLQINHHRSIETILDGHLEHEILVGANQYNCEKCGKKQDAETMTELVRLPPVLSLQLVRYEYDLKTMAKKKIKAAISLPPTLDMGPRLGPRGDGSKVGGGERGKGVSPKGGKGSNGDDDEEYVYELRCVLYHKGSNVHSGHIVAEADDSDGGR 452
BLAST of mRNA_A-nodosum_M_contig116.48.1 vs. uniprot
Match: A0A5D6XMC9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMC9_9STRA) HSP 1 Score: 226 bits (576), Expect = 6.990e-59 Identity = 150/427 (35.13%), Postives = 212/427 (49.65%), Query Frame = 1
Query: 1 DHVRRK--------NCANNPRCLYGLGEGKQGIWSSNPGLLVTLGEDPSGMIKAL-PAVETPSNGSNKMPAGGVFEKGDVLPPPPNRRLPAGLKNLGATCYLNSQLQALYANKDFRRGVYAWRSSRRGRLFAAGDMGSPAEANSPDGGRSNRTGCSSAAGVYSGVLPGGTELSEIAFVGVGGNSTEAFYGDDKDENIMEELQLVFGHMQEGLAKVYDPARFATLLGIDKGIQQDPQEFNKLFMSLLERCLQRSALPLR-SLVRGLFSGELAYVTRCSKCKFASRNMNAFNELELQIGSNRTIDKCLDSFLEAESLDGDNQYLCEKCGRKQDAVRAIELH--RLPPVISIQLLRYVYDARTGQRKKIKTPMALATTLDMGPRLGPQGEARASSGSGSTANAGNCVYRLACVLYHKGSNVHSGHYIAEV 1245
DH R+K NCA NP CL+GLGE ++G+W+ + LG+DP ++A+ P N ++ PA E G L LP GL+NLGATCYLNS LQ L+ N FR VY W PG ++ E+A M LQ +FG MQ G VYDP FA L ++ +QQD QEF+KL ++ L +S + LV LF G+++YVT+C +CK S +++ E+ L I ++T+ CL+S+L AE LDG+N+Y C+ C K+ A R IEL+ RLP I++QL+R+VYDA G++KK+ + + TL+M L G A A S + +YRL+ L H+G + H+GHY A V
Sbjct: 44 DHHRKKSKSAAALRNCAENPNCLFGLGEHQEGVWAKPKLVQRLLGDDPREQLRAVYPDAPRRKNSASSSPAA---ESGASL-------LPCGLRNLGATCYLNSMLQTLFTNVAFREAVYRWEPKP----------------------------------------PGASD--ELALQ-------------------MRALQKLFGLMQLGKRAVYDPNEFADTLALNSVVQQDVQEFSKLLLTHLRMIFSQSRISDHWDLVDRLFQGQMSYVTKCLRCKTRSERPSSYYEISLNIKGHKTVQACLESYLSAEVLDGENKYFCDTCDSKERAERYIELNPKRLPQTITLQLMRFVYDAHEGRKKKLMDVIEVNETLNMTELLRRCGLADAFS------ETNDAIYRLSGYLNHRGKSTHAGHYTASV 393
BLAST of mRNA_A-nodosum_M_contig116.48.1 vs. uniprot
Match: A0A2D4BF54_PYTIN (Ubiquitin-specific protease, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BF54_PYTIN) HSP 1 Score: 224 bits (572), Expect = 2.060e-58 Identity = 149/421 (35.39%), Postives = 205/421 (48.69%), Query Frame = 1
Query: 4 HVRRKNCANNPRCLYGLGEGKQGIWSSNPGLLVTLGEDPSGMIKALPAVETPSNGSNKMPAGGVFEKGDVLPPPPNRRLPAGLKNLGATCYLNSQLQALYANKDFRRGVYAWRSSRRGRLFAAGDMGSPAEANSPDGGRSNRTGCSSAAGVYSGVLPGGTELSEIAFVGVGGNSTEAFYGDDKDENIMEELQLVFGHMQEGLAKVYDPARFATLLGIDKGIQQDPQEFNKLFMSLLERCLQRSALPLR-SLVRGLFSGELAYVTRCSKCKFASRNMNAFNELELQIGSNRTIDKCLDSFLEAESLDGDNQYLCEKCGRKQDAVRAIELH--RLPPVISIQLLRYVYDARTGQRKKIKTPMALATTLDMGPRLGPQGEARASSGSGSTANAGNCVYRLACVLYHKGSNVHSGHYIAEVPCKR 1257
HV RKNC NP CL+GLGE +G+W L LGEDP + ++ E GD P R P GL+NLGATCYLNS LQ L+ N FRR V+ W + A SP + M LQ +F MQ G +VYDP FA+ L ++ +QQD QEFNKL ++ L ++S + LV LF G+L+YVT+C +C+ S ++NE+ L I ++T+++C+ S+L E LD +N+YLCE C K++A R IE+ RLPPV+++QLLR+VYDA G++KK+ + + TL+M L G A A S + VYRL+ L H+G + H GHY A V R
Sbjct: 51 HV-RKNCEANPNCLFGLGEYSKGVWQGAKLLRRVLGEDPRDLQRSFSV--------------SSLENGDDXP----RLAPCGLRNLGATCYLNSMLQCLFVNVPFRRAVFEWEPTDN--------------AMSP-----------------------------------------------QQMRPMRALQQLFAAMQLGKKRVYDPQEFASTLSLNSVMQQDAQEFNKLLLAHLRGIFKQSRVHKHVELVDQLFQGQLSYVTKCLRCQQRSARSCSYNEISLNIKGHKTVEQCIASYLAPELLDNENKYLCENCNSKENAERFIEVDHARLPPVLTLQLLRFVYDASAGRKKKLMDVIEVGETLNMSQVLRSCGVAAAFDVSQ------DAVYRLSGYLNHRGKSAHVGHYTASVAYPR 385
BLAST of mRNA_A-nodosum_M_contig116.48.1 vs. uniprot
Match: G4ZAZ0_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZAZ0_PHYSP) HSP 1 Score: 218 bits (554), Expect = 5.090e-56 Identity = 141/413 (34.14%), Postives = 197/413 (47.70%), Query Frame = 1
Query: 16 KNCANNPRCLYGLGEGKQGIWSSNPGLLVTLGEDPSGMIKALPAVETPSNGSNKMPAGGVFEKGDVLPPPPNRRLPAGLKNLGATCYLNSQLQALYANKDFRRGVYAWRSSRRGRLFAAGDMGSPAEANSPDGGRSNRTGCSSAAGVYSGVLPGGTELSEIAFVGVGGNSTEAFYGDDKDENIMEELQLVFGHMQEGLAKVYDPARFATLLGIDKGIQQDPQEFNKLFMSLLERCLQRSALPLR-SLVRGLFSGELAYVTRCSKCKFASRNMNAFNELELQIGSNRTIDKCLDSFLEAESLDGDNQYLCEKCGRKQDAVRAIEL--HRLPPVISIQLLRYVYDARTGQRKKIKTPMALATTLDMGPRLGPQGEARASSGSGSTANAGNCVYRLACVLYHKGSNVHSGHYIAEV 1245
+NCA+NP CLYGLGE +G+W LL G DP + GS + AG R +P GL+NLGATCYLNS LQ L+ N FRR VY W E P D++ M LQ +F MQ G YDP+ FA+ L ++ +QQD QEF+KL ++ L +S + LV +F G+++YVT+C +CK S +++ E+ L I +++++ C+ S+L AE L+G+N+Y CE C KQ A R +EL LPP + +QLLR+VYDA G++KK+ + + TL+M L G A A S AG+ +YRL L H+G + H GHY A V
Sbjct: 97 RNCADNPNCLYGLGERLKGVWRRESLLLRVFGPDPRARRR----------GSGR--AG--------------RPMPCGLRNLGATCYLNSMLQCLFVNLPFRRAVYGW------------------EPKQP-------------------------------------------LTDEEQARTMRALQKLFAQMQLGNESYYDPSEFASTLSLNNVMQQDAQEFSKLLLTHLRAIFGQSRISSHWDLVDRIFQGQMSYVTKCLRCKNKSMRPSSYYEISLNIKGHKSVEDCIGSYLSAEVLEGENKYFCEHCDSKQCAERFLELKPRALPPTLMVQLLRFVYDANAGRKKKLTDMIEINETLNMTELLRRSGHAEAFDDS-----AGDAIYRLQGYLNHRGKSAHVGHYTASV 417
BLAST of mRNA_A-nodosum_M_contig116.48.1 vs. uniprot
Match: A0A8K1C628_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C628_PYTOL) HSP 1 Score: 217 bits (553), Expect = 5.820e-56 Identity = 141/413 (34.14%), Postives = 201/413 (48.67%), Query Frame = 1
Query: 16 KNCANNPRCLYGLGEGKQGIWSSNPGLLVTLGEDPSGMIKALPAVETPSNGSNKMPAGGVFEKGDVLPPPPNRRLPAGLKNLGATCYLNSQLQALYANKDFRRGVYAWRSSRRGRLFAAGDMGSPAEANSPDGGRSNRTGCSSAAGVYSGVLPGGTELSEIAFVGVGGNSTEAFYGDDKDENIMEELQLVFGHMQEGLAKVYDPARFATLLGIDKGIQQDPQEFNKLFMSLLERCLQRSALPLRS-LVRGLFSGELAYVTRCSKCKFASRNMNAFNELELQIGSNRTIDKCLDSFLEAESLDGDNQYLCEKCGRKQDAVRAIEL--HRLPPVISIQLLRYVYDARTGQRKKIKTPMALATTLDMGPRLGPQGEARASSGSGSTANAGNCVYRLACVLYHKGSNVHSGHYIAEV 1245
KNC NP CLYGLGE ++GIW + + LG+DP + +A + V R P GL+NLGATCYLNS LQ L+ + FR+ VY+W P E N V P + M LQ +FG MQ G VYDPA FA+ L ++ +QQD QEFNKL ++ + +S L LV LF G++ YVT+C +C S +++ E+ L I ++T+++C+ ++L AE L+GDN+Y C+ C K+ A R IE+ +LPPV+++QLLR+VYDA+ G++KK+ + + TL+M L G +A A + VYRL L H+G + H GHY A V
Sbjct: 56 KNCEQNPNCLYGLGEYQKGIWQTKKLVRRLLGDDPRELQRA------------------PYTSAAVTDLATTRWAPCGLRNLGATCYLNSMLQCLFMIQPFRQAVYSWE---------------PQEKN---------------------VNP-------------------------QQVQQMRALQRLFGAMQSGNKNVYDPAEFASTLSLNNVVQQDAQEFNKLLLAHIRGIFSQSRLEHHGELVDQLFQGQMNYVTKCLRCNQRSSRPSSYQEISLNIKGHKTVEQCIQAYLAAEYLEGDNKYFCDHCNSKELAERFIEVDPEKLPPVLTLQLLRFVYDAQAGKKKKLMDVIEVGETLNMTEVLRRCGHPKAFD------VARDAVYRLTGYLNHRGKSAHVGHYTASV 383
BLAST of mRNA_A-nodosum_M_contig116.48.1 vs. uniprot
Match: H3H2I2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H2I2_PHYRM) HSP 1 Score: 216 bits (549), Expect = 1.000e-55 Identity = 143/423 (33.81%), Postives = 200/423 (47.28%), Query Frame = 1
Query: 1 DHVRRK----NCANNPRCLYGLGEGKQGIWSSNPGLLVTLGEDPSGMIKALPAVETPSNGSNKMPAGGVFEKGDVLPPPPNRRLPAGLKNLGATCYLNSQLQALYANKDFRRGVYAWRSSRRGRLFAAGDMGSPAEANSPDGGRSNRTGCSSAAGVYSGVLPGGTELSEIAFVGVGGNSTEAFYGDDKDENI-MEELQLVFGHMQEGLAKVYDPARFATLLGIDKGIQQDPQEFNKLFMSLLERCLQRSALPLR-SLVRGLFSGELAYVTRCSKCKFASRNMNAFNELELQIGSNRTIDKCLDSFLEAESLDGDNQYLCEKCGRKQDAVRAIEL--HRLPPVISIQLLRYVYDARTGQRKKIKTPMALATTLDMGPRLGPQGEARASSGSGSTANAGNCVYRLACVLYHKGSNVHSGHYIAEV 1245
DH R++ NCA+NP CLYGLGE +G+W L G+DP +A GG + P GL+NLGATCYLNS LQ L+ N FRR VY W ++ L DK++ + M LQ +F MQ G YDP FA+ L ++ +QQD QEF+KL ++ L +S LV +F G+++YVT+C KCK S +++ E+ L I ++T++ C+ S+L AE L+G+N+Y CE C KQ A R +EL LPP + +QLLR+VYDA G++KK+ + + TL+M L G A+A + SG + VYRL L H+G + H GHY A V
Sbjct: 32 DHHRKRGKSANCADNPNCLYGLGEHHKGVWQGGKLLRRAFGDDPRDRKRAK--------------CGGGWA-------------PCGLRNLGATCYLNSMLQCLFVNLPFRRAVYEWEPKKQ--LV------------------------------------------------------------DKEQALQMRALQKLFAQMQLGNESYYDPTEFASTLSLNNVMQQDAQEFSKLLLAHLRTIFGQSRFSGHWDLVDRIFQGQMSYVTKCLKCKNKSMRPSSYYEISLNIKGHKTVEDCIGSYLAAEVLEGENKYFCEHCDAKQCAERFLELKPRALPPTLMVQLLRFVYDANAGRKKKLTDVIEINETLNMTELLRRSGHAKAFNESG------DAVYRLQGYLNHRGKSAHVGHYTASV 359
BLAST of mRNA_A-nodosum_M_contig116.48.1 vs. uniprot
Match: A0A225VP86_9STRA (Ubiquitin-specific protease n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VP86_9STRA) HSP 1 Score: 216 bits (550), Expect = 1.670e-55 Identity = 137/414 (33.09%), Postives = 200/414 (48.31%), Query Frame = 1
Query: 16 KNCANNPRCLYGLGEGKQGIWSSNPGLLVTLGEDPSGMIKALPAVETPSNGSNKMPAGGVFEKGDVLPPPPNRRLPAGLKNLGATCYLNSQLQALYANKDFRRGVYAWRSSRRGRLFAAGDMGSPAEANSPDGGRSNRTGCSSAAGVYSGVLPGGTELSEIAFVGVGGNSTEAFYGDDKDENI-MEELQLVFGHMQEGLAKVYDPARFATLLGIDKGIQQDPQEFNKLFMSLLERCLQRSALPLR-SLVRGLFSGELAYVTRCSKCKFASRNMNAFNELELQIGSNRTIDKCLDSFLEAESLDGDNQYLCEKCGRKQDAVRAIEL--HRLPPVISIQLLRYVYDARTGQRKKIKTPMALATTLDMGPRLGPQGEARASSGSGSTANAGNCVYRLACVLYHKGSNVHSGHYIAEV 1245
+NCA+NP CLYGLGE ++G+W + + GEDP ++ G +GD +P GL+NLGATCYLNS LQ L+ N FR+ VY W + V+ DK++ + M LQ +F MQ G YDP FA+ L ++ +QQD QEF+KL ++ L ++S LV +F G+++YVT+C KCK S +++ E+ L I ++++++C++S+L AE L+G+N+Y CE C KQ A R +EL LPP + +QLLR+VYDA G++KK+ + + L+M L G A A A A + VYRL L H+G + H GHY A V
Sbjct: 46 RNCADNPNCLYGLGERQKGVWQAPKLIQRVFGEDP------------------RVRTRGSTNQGDPMP--------CGLRNLGATCYLNSMLQCLFVNLPFRQAVYEWEPKEQ-------------------------------------VV-------------------------DKEQTLQMRALQKLFAQMQLGNENYYDPTEFASTLSLNNVMQQDAQEFSKLLLAHLRTIFRQSRFSSHWDLVDRIFQGQMSYVTKCLKCKNKSMRPSSYYEISLNIKGHKSVEECVESYLSAEVLEGENKYFCEHCDGKQCAERFLELKPRALPPTLMVQLLRFVYDANAGRKKKLTDVIEINDKLNMTDLLRRSGHAEAF------AEANDAVYRLQGYLNHRGKSAHVGHYTASV 365
BLAST of mRNA_A-nodosum_M_contig116.48.1 vs. uniprot
Match: A0A6A3WD98_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3WD98_9STRA) HSP 1 Score: 216 bits (549), Expect = 2.300e-55 Identity = 146/427 (34.19%), Postives = 201/427 (47.07%), Query Frame = 1
Query: 1 DHVRRK--------NCANNPRCLYGLGEGKQGIWSSNPGLLVTLGEDPSGMIKALPAVETPSNGSNKMPAGGVFEKGDVLPPPPNRRLPAGLKNLGATCYLNSQLQALYANKDFRRGVYAWRSSRRGRLFAAGDMGSPAEANSPDGGRSNRTGCSSAAGVYSGVLPGGTELSEIAFVGVGGNSTEAFYGDDKDENI-MEELQLVFGHMQEGLAKVYDPARFATLLGIDKGIQQDPQEFNKLFMSLLERCLQRSALPLR-SLVRGLFSGELAYVTRCSKCKFASRNMNAFNELELQIGSNRTIDKCLDSFLEAESLDGDNQYLCEKCGRKQDAVRAIEL--HRLPPVISIQLLRYVYDARTGQRKKIKTPMALATTLDMGPRLGPQGEARASSGSGSTANAGNCVYRLACVLYHKGSNVHSGHYIAEV 1245
DH RR+ NCA+NP CLYGLGE ++G+W LL G DP + GS + AG R P GL+NLGATCYLNS LQ L+ N FRR VY W E E DK++ + M LQ +F MQ G YDP FA+ L ++ +QQD QEF+KL ++ L +S LV +F G+++YVT+C +CK S +++ E+ L I +++++ C+ S+L AE LDG+N+Y CE C KQ A R +EL LPP + +QL+R+VYDA G++KK+ + + TL+M L G A A S AG+ +YRL L H+G + H GHY A V
Sbjct: 33 DHHRRRGKAASALRNCADNPNCLYGLGERQKGVWRRESLLLRVFGPDPRARRR----------GSGR--AG--------------RPTPCGLRNLGATCYLNSMLQCLFVNLPFRRAVYEW------------------------------------------------EPKETLV--------------DKEQALQMRALQKLFAQMQLGNESYYDPTEFASTLSLNNVMQQDAQEFSKLLLTHLRTIFGQSRFSSHWDLVDRIFQGQMSYVTKCLRCKNKSMRPSSYYEISLNIKGHKSVEDCIGSYLSAEVLDGENKYFCEHCDAKQCAERFLELKPRALPPTMMVQLMRFVYDANAGRKKKLTDVIEINETLNMTELLRRSGHAEAFDES-----AGDAIYRLQGYLNHRGKSAHVGHYTASV 366
BLAST of mRNA_A-nodosum_M_contig116.48.1 vs. uniprot
Match: W2RHL7_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2RHL7_PHYPN) HSP 1 Score: 213 bits (543), Expect = 6.150e-55 Identity = 135/413 (32.69%), Postives = 194/413 (46.97%), Query Frame = 1
Query: 16 KNCANNPRCLYGLGEGKQGIWSSNPGLLVTLGEDPSGMIKALPAVETPSNGSNKMPAGGVFEKGDVLPPPPNRRLPAGLKNLGATCYLNSQLQALYANKDFRRGVYAWRSSRRGRLFAAGDMGSPAEANSPDGGRSNRTGCSSAAGVYSGVLPGGTELSEIAFVGVGGNSTEAFYGDDKDENIMEELQLVFGHMQEGLAKVYDPARFATLLGIDKGIQQDPQEFNKLFMSLLERCLQRSALPLR-SLVRGLFSGELAYVTRCSKCKFASRNMNAFNELELQIGSNRTIDKCLDSFLEAESLDGDNQYLCEKCGRKQDAVRAIEL--HRLPPVISIQLLRYVYDARTGQRKKIKTPMALATTLDMGPRLGPQGEARASSGSGSTANAGNCVYRLACVLYHKGSNVHSGHYIAEV 1245
+NC +NP CLYGLGE ++G+W + + G+DP + S+K GD +P GL+NLGATCYLNS LQ L+ N FR+ VY W + D + M LQ +F MQ G YDP FA+ L ++ +QQD QEF+KL ++ L +S LV +F G+++YVT+C KCK S ++++ E+ L I ++T++ C+ S+L AE L+G+N+Y CE C KQ A R +EL LPP + +QL+R+VYDA G++KK+ + + TL+M L G A A +GSG +YRL L H+G + H GHY A V
Sbjct: 45 RNCVDNPNCLYGLGERQKGVWQGSKLVRRVFGDDPRERERV----------SSK--------HGDPMP--------CGLRNLGATCYLNSMLQCLFVNLPFRQAVYEWEPKEQ-------------------------------------------------------------LVDKEQTQQMRALQKLFAQMQLGNESYYDPTEFASTLSLNNVMQQDAQEFSKLLLAHLRTIFGQSRFSRHWDLVDRIFQGQMSYVTKCLKCKNKSMRLSSYYEISLNIKGHKTVEDCIGSYLSAEVLEGENKYFCEHCDTKQCAERYLELKPQSLPPTLMVQLMRFVYDANAGRKKKLTDVIEINETLNMTELLRRSGHAEAFNGSGDV------IYRLQGYLNHRGKSAHVGHYTASV 364
BLAST of mRNA_A-nodosum_M_contig116.48.1 vs. uniprot
Match: A0A8J5M5A2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A8J5M5A2_9STRA) HSP 1 Score: 211 bits (538), Expect = 6.400e-54 Identity = 136/414 (32.85%), Postives = 193/414 (46.62%), Query Frame = 1
Query: 16 KNCANNPRCLYGLGEGKQGIWSSNPGLLVTLGEDPSGMIKALPAVETPSNGSNKMPAGGVFEKGDVLPPPPNRRLPAGLKNLGATCYLNSQLQALYANKDFRRGVYAWRSSRRGRLFAAGDMGSPAEANSPDGGRSNRTGCSSAAGVYSGVLPGGTELSEIAFVGVGGNSTEAFYGDDKDENI-MEELQLVFGHMQEGLAKVYDPARFATLLGIDKGIQQDPQEFNKLFMSLLERCLQRSALPLR-SLVRGLFSGELAYVTRCSKCKFASRNMNAFNELELQIGSNRTIDKCLDSFLEAESLDGDNQYLCEKCGRKQDAVRAIEL--HRLPPVISIQLLRYVYDARTGQRKKIKTPMALATTLDMGPRLGPQGEARASSGSGSTANAGNCVYRLACVLYHKGSNVHSGHYIAEV 1245
+NC +NP CLYGLGE +G+W + + G+DP + G + G+ +P GL+NLGATCYLNS LQ L+ N FR+ VY W E E DK++ + M LQ +F MQ G YDP FA+ L ++ +QQD QEF+KL ++ L +S LV +F G+++YVT+C KCK S +++ E+ L I + T++ C+ S+L AE L+G+N+Y CE C KQ A R +EL LPP + +QL+R+VYDA G++KK+ + + TL M L G A A GSG + +YRL L H+G + H GHY A V
Sbjct: 46 RNCVDNPNCLYGLGERNKGVWQGSKLVRRVFGDDPRDRER------------------GASKHGEPMP--------CGLRNLGATCYLNSMLQCLFVNLPFRQAVYEW------------------------------------------------EPKEQLV--------------DKEQALQMRALQKLFAQMQLGNESYYDPTEFASTLSLNNVMQQDAQEFSKLLLAHLRTIFGQSRFSRHWDLVDRIFQGQMSYVTKCLKCKNKSMRPSSYYEISLNIKGHETVEDCIGSYLSAEVLEGENKYFCEHCDAKQCAERYLELKPQALPPTLMVQLMRFVYDANAGRKKKLTDVIEINETLHMTELLRRSGHAEAFDGSG------DAIYRLQGYLNHRGKSAHVGHYTASV 365 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig116.48.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig116.48.1 >prot_A-nodosum_M_contig116.48.1 ID=prot_A-nodosum_M_contig116.48.1|Name=mRNA_A-nodosum_M_contig116.48.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=419bp MIKALPAVETPSNGSNKMPAGGVFEKGDVLPPPPNRRLPAGLKNLGATCYback to top mRNA from alignment at A-nodosum_M_contig116:758474..765020+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig116.48.1 ID=mRNA_A-nodosum_M_contig116.48.1|Name=mRNA_A-nodosum_M_contig116.48.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6547bp|location=Sequence derived from alignment at A-nodosum_M_contig116:758474..765020+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig116:758474..765020+ >mRNA_A-nodosum_M_contig116.48.1 ID=mRNA_A-nodosum_M_contig116.48.1|Name=mRNA_A-nodosum_M_contig116.48.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1257bp|location=Sequence derived from alignment at A-nodosum_M_contig116:758474..765020+ (Ascophyllum nodosum dioecious)back to top |