mRNA_A-nodosum_M_contig116.16.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig116.16.1 vs. uniprot
Match: D8LGT9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGT9_ECTSI) HSP 1 Score: 95.1 bits (235), Expect = 4.880e-21 Identity = 58/102 (56.86%), Postives = 65/102 (63.73%), Query Frame = 1
Query: 1 DFFEDCALPPRCIKQVVMLGAGMDTRGLRLRASIGTSVFEVDQALVLAAKRNTLQGTLAVSKA------FSEESLGGVCEARVIGVEADLGQTGWEEKLLDA 288
DFFEDCA PR IKQ+V LGAGMDTRGLRLRAS T VFEVDQALVL K L A + F E GGV + RV+ VEADL GW+ +L +A
Sbjct: 164 DFFEDCA-GPRGIKQIVSLGAGMDTRGLRLRASGDTKVFEVDQALVLRVKGALLTQAAAADEVAAALAGFRERRDGGVGQGRVVPVEADLSVEGWQGELFEA 264
BLAST of mRNA_A-nodosum_M_contig116.16.1 vs. uniprot
Match: D7FXP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXP3_ECTSI) HSP 1 Score: 89.0 bits (219), Expect = 4.150e-19 Identity = 55/102 (53.92%), Postives = 63/102 (61.76%), Query Frame = 1
Query: 1 DFFEDCALPPRCIKQVVMLGAGMDTRGLRLRASIGTSVFEVDQALVLAAKRNTLQGTLAVSKA------FSEESLGGVCEARVIGVEADLGQTGWEEKLLDA 288
DFFEDCA PR IKQ+V LGAGMDTRGLR RAS T VFEVDQALVL K L A + F E GGV + RV+ V+A L GW+ +L +A
Sbjct: 69 DFFEDCA-GPRGIKQIVSLGAGMDTRGLRRRASGDTKVFEVDQALVLRVKSALLTQAAAADEVAAALAGFRERRDGGVGQGRVVPVQAALSVEGWQGELFEA 169
BLAST of mRNA_A-nodosum_M_contig116.16.1 vs. uniprot
Match: D7FXP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXP1_ECTSI) HSP 1 Score: 60.5 bits (145), Expect = 5.380e-10 Identity = 39/80 (48.75%), Postives = 45/80 (56.25%), Query Frame = 1
Query: 67 MDTRGLRLRASIGTSVFEVDQALVLAAKRNTLQGTLAVSKA------FSEESLGGVCEARVIGVEADLGQTGWEEKLLDA 288
MDTRGLRLR S T VFEVDQALVL K L A + F E GV + RV+ VEADL GW+ +L +A
Sbjct: 1 MDTRGLRLRVSGDTKVFEVDQALVLRVKSALLTQAAAADEVAAAVAGFRERRDRGVGQGRVVPVEADLRVEGWQGELFEA 80
BLAST of mRNA_A-nodosum_M_contig116.16.1 vs. uniprot
Match: A0A1D2AH29_AUXPR (Uncharacterized protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2AH29_AUXPR) HSP 1 Score: 58.9 bits (141), Expect = 4.360e-8 Identity = 37/81 (45.68%), Postives = 49/81 (60.49%), Query Frame = 1
Query: 40 KQVVMLGAGMDTRGLRLRASIGTSVFEVDQALVLAAKRNTLQGTLAVSKAFSEESLGGVCEARVIGVEADLGQTGWEEKLL 282
+QVV+LGAGMDTR RL+ +G S +EVD++ VLAAKR+ L+ A + + GVEADL + GW E LL
Sbjct: 128 RQVVVLGAGMDTRPWRLQLPLGVSWYEVDRSDVLAAKRHALKKNGAGLEPGHTRKAYPLLTGSWKGVEADLEEPGWWESLL 208
BLAST of mRNA_A-nodosum_M_contig116.16.1 vs. uniprot
Match: A0A7S2MBA9_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2MBA9_9DINO) HSP 1 Score: 52.0 bits (123), Expect = 2.370e-6 Identity = 31/82 (37.80%), Postives = 44/82 (53.66%), Query Frame = 1
Query: 37 IKQVVMLGAGMDTRGLRLRASIGTSVFEVDQALVLAAKRNTLQGTLAVSKAFSEESLGGVCEARVIGVEADLGQTGWEEKLL 282
IKQ+V+LGAG DTR RL ++FE+D A KR + A + + ++ V + R + VE DLG+ GW E L
Sbjct: 34 IKQIVLLGAGFDTRAWRLPLPEDCTIFELDVAKAHELKRERIAEMKAAASPGEKLAMLQVPKCRRVEVEVDLGEAGWAEARL 115
BLAST of mRNA_A-nodosum_M_contig116.16.1 vs. uniprot
Match: UPI001F0F95B5 (SAM-dependent methyltransferase n=1 Tax=Streptomyces epipremni TaxID=2053013 RepID=UPI001F0F95B5) HSP 1 Score: 53.1 bits (126), Expect = 4.300e-6 Identity = 36/81 (44.44%), Postives = 45/81 (55.56%), Query Frame = 1
Query: 37 IKQVVMLGAGMDTRGLRLRASIGTSVFEVDQALVLAAKRNTLQGTLAVSKAFSEESLGGVCEARVIGVEADLGQTGWEEKL 279
I+QVV+LGAG+DTR RL G +VFEVD+ VLA K TL G AV + AR + + ADL Q W +L
Sbjct: 78 IRQVVLLGAGLDTRAYRLPWPDGCTVFEVDREEVLAFKHRTLDGAAAVPR------------ARRVALAADLRQD-WAARL 145
BLAST of mRNA_A-nodosum_M_contig116.16.1 vs. uniprot
Match: A0A7C2X3T6_9CHLR (S-adenosyl-L-methionine-dependent methyltransferase (Fragment) n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C2X3T6_9CHLR) HSP 1 Score: 52.8 bits (125), Expect = 5.770e-6 Identity = 25/50 (50.00%), Postives = 34/50 (68.00%), Query Frame = 1
Query: 34 CIKQVVMLGAGMDTRGLRLRASIGTSVFEVDQALVLAAKRNTLQGTLAVS 183
CI+Q+V+LGAG+DTR RL GT +FEVDQ +VL K + L+ A +
Sbjct: 80 CIRQIVLLGAGLDTRAFRLEWPAGTRLFEVDQPMVLERKESILRDARATA 129
BLAST of mRNA_A-nodosum_M_contig116.16.1 vs. uniprot
Match: I0Z4G8_COCSC (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z4G8_COCSC) HSP 1 Score: 52.4 bits (124), Expect = 8.030e-6 Identity = 35/85 (41.18%), Postives = 49/85 (57.65%), Query Frame = 1
Query: 40 KQVVMLGAGMDTRGLRLRASIGTSVFEVDQALVLAAKRNTLQGTLAVSKAFSEESLGGVC----EARVIGVEADLGQTGWEEKLL 282
+QVV+LGAGMD+R RL GTS FE+D+A V+ AK+ L A +FS ++ GV A + DLG GW ++L+
Sbjct: 53 RQVVLLGAGMDSRAWRLDLPEGTSWFEIDRADVVEAKKKVLTSAQA---SFSADTSKGVKYPLRAASHSSFDVDLGTDGWTKELM 134
BLAST of mRNA_A-nodosum_M_contig116.16.1 vs. uniprot
Match: A0A7I8K853_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K853_SPIIN) HSP 1 Score: 52.4 bits (124), Expect = 9.010e-6 Identity = 35/79 (44.30%), Postives = 44/79 (55.70%), Query Frame = 1
Query: 43 QVVMLGAGMDTRGLRLRASIGTSVFEVDQALVLAAKRNTLQGTLAVSKAFSEESLGGVCEARVIGVEADLGQTGWEEKL 279
QVV+LGAGMDTR RL +SVFEVD +L K L+ L +EE V +I V AD+G++ W EKL
Sbjct: 125 QVVLLGAGMDTRAYRLGCLSRSSVFEVDFPELLETKEALLREALG----SAEEQGAAVMARSLIRVAADIGESEWLEKL 199
BLAST of mRNA_A-nodosum_M_contig116.16.1 vs. uniprot
Match: A0A0N0A6N2_9ACTN (S-adenosyl-L-methionine-dependent methyltransferase n=6 Tax=Streptomyces TaxID=1883 RepID=A0A0N0A6N2_9ACTN) HSP 1 Score: 52.0 bits (123), Expect = 1.160e-5 Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 1
Query: 40 KQVVMLGAGMDTRGLRLRASIGTSVFEVDQALVLAAKRNTLQGTLAVSKA 189
+QVVMLGAG+DTR RL G +VFEVDQ VLA K++ L G AV +A
Sbjct: 98 RQVVMLGAGLDTRAYRLAWPEGCTVFEVDQPEVLALKQSVLDGLGAVPRA 147 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig116.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig116.16.1 >prot_A-nodosum_M_contig116.16.1 ID=prot_A-nodosum_M_contig116.16.1|Name=mRNA_A-nodosum_M_contig116.16.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=96bp DFFEDCALPPRCIKQVVMLGAGMDTRGLRLRASIGTSVFEVDQALVLAAKback to top mRNA from alignment at A-nodosum_M_contig116:276770..277657- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig116.16.1 ID=mRNA_A-nodosum_M_contig116.16.1|Name=mRNA_A-nodosum_M_contig116.16.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=888bp|location=Sequence derived from alignment at A-nodosum_M_contig116:276770..277657- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig116:276770..277657- >mRNA_A-nodosum_M_contig116.16.1 ID=mRNA_A-nodosum_M_contig116.16.1|Name=mRNA_A-nodosum_M_contig116.16.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=288bp|location=Sequence derived from alignment at A-nodosum_M_contig116:276770..277657- (Ascophyllum nodosum dioecious)back to top |