mRNA_A-nodosum_M_contig1156.23.1 (mRNA) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1156.23.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 4.410e-20 Identity = 44/77 (57.14%), Postives = 55/77 (71.43%), Query Frame = 1
Query: 1 MEEAQESGKILYPDPLDWWRINAVKFPLLAALARRLLTIPASQAQSERVFSSAGQIVTQTRNRLSSENVELLVALKN 231
M E + G +Y DPLDWWR+ FP LA LARR+L IPA+QA+SER+FS AG IVT+ RN L+ VELLV L++
Sbjct: 209 MYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRH 285
BLAST of mRNA_A-nodosum_M_contig1156.23.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 91.7 bits (226), Expect = 7.310e-20 Identity = 46/78 (58.97%), Postives = 60/78 (76.92%), Query Frame = 1
Query: 1 MEEAQESGKILYPDPLDWWRINAVKFPLLAALARRLLTIPASQAQSERVFSSAGQIVTQTRNRLSSENVELLVALKNI 234
M++ K ++ +PLD WR +++PLLAALARR+L IP+SQAQSERVFS+AG VT TR+RL ENVELLV L+N+
Sbjct: 469 MQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNV 546
BLAST of mRNA_A-nodosum_M_contig1156.23.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 6.740e-19 Identity = 43/73 (58.90%), Postives = 57/73 (78.08%), Query Frame = 1
Query: 13 QESGKILYPDPLDWWRINAVKFPLLAALARRLLTIPASQAQSERVFSSAGQIVTQTRNRLSSENVELLVALKN 231
+E G+ + PL+WWR+ A ++P LA+LARR+L IPA QAQSERVFSSAG +VT+TR R+ ENV L+V L+N
Sbjct: 470 EEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLRN 542
BLAST of mRNA_A-nodosum_M_contig1156.23.1 vs. uniprot
Match: A0A151I7P1_9HYME (Zinc finger BED domain-containing protein 1 (Fragment) n=1 Tax=Cyphomyrmex costatus TaxID=456900 RepID=A0A151I7P1_9HYME) HSP 1 Score: 77.0 bits (188), Expect = 6.950e-17 Identity = 36/62 (58.06%), Postives = 46/62 (74.19%), Query Frame = 1
Query: 40 DPLDWWRINAVKFPLLAALARRLLTIPASQAQSERVFSSAGQIVTQTRNRLSSENVELLVAL 225
D +DWW+ N +FP+LAA+AR+ L IPA+Q SER+FS AG IVT TR++L ENVE L L
Sbjct: 16 DIIDWWKCNVTRFPILAAVARQYLAIPATQVSSERLFSDAGNIVTATRSKLIPENVEKLCFL 77
BLAST of mRNA_A-nodosum_M_contig1156.23.1 vs. uniprot
Match: UPI000EAB1B8F (zinc finger BED domain-containing protein 1-like n=1 Tax=Ceratina calcarata TaxID=156304 RepID=UPI000EAB1B8F) HSP 1 Score: 78.6 bits (192), Expect = 1.470e-16 Identity = 36/57 (63.16%), Postives = 46/57 (80.70%), Query Frame = 1
Query: 46 LDWWRINAVKFPLLAALARRLLTIPASQAQSERVFSSAGQIVTQTRNRLSSENVELL 216
+ WW+ N V+FPLLAA+AR LL IPA+Q SER+FS+AG IV + R+RL SENVE+L
Sbjct: 104 ISWWKANIVRFPLLAAVARNLLAIPATQVTSERLFSTAGNIVNEKRSRLCSENVEML 160
BLAST of mRNA_A-nodosum_M_contig1156.23.1 vs. uniprot
Match: A0A1A8CIX7_9TELE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Nothobranchius kadleci TaxID=1051664 RepID=A0A1A8CIX7_9TELE) HSP 1 Score: 72.4 bits (176), Expect = 5.430e-15 Identity = 32/62 (51.61%), Postives = 48/62 (77.42%), Query Frame = 1
Query: 43 PLDWWRINAVKFPLLAALARRLLTIPASQAQSERVFSSAGQIVTQTRNRLSSENVELLVALK 228
PL+WW++NA +P+LA+LA+ L IPA+ SERVFS+AG IV+ R+ ++ E+V++LV LK
Sbjct: 23 PLEWWKVNAYAYPILASLAKAYLCIPATSVPSERVFSTAGDIVSAQRSLITPEHVDMLVFLK 84
BLAST of mRNA_A-nodosum_M_contig1156.23.1 vs. uniprot
Match: UPI00109FC612 (zinc finger BED domain-containing protein 4-like n=1 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=UPI00109FC612) HSP 1 Score: 73.2 bits (178), Expect = 8.390e-15 Identity = 36/70 (51.43%), Postives = 47/70 (67.14%), Query Frame = 1
Query: 19 SGKILYPDPLDWWRINAVKFPLLAALARRLLTIPASQAQSERVFSSAGQIVTQTRNRLSSENVELLVALK 228
SG + DPL WW+ N K+P LA +AR L +P + SERVFS+AG IVT R+ LS ENV++L+ LK
Sbjct: 59 SGIPVDGDPLTWWKSNECKYPHLATMARHHLAVPGTSVPSERVFSTAGDIVTAKRSTLSPENVDILMFLK 128
BLAST of mRNA_A-nodosum_M_contig1156.23.1 vs. uniprot
Match: A0A2G9RVU8_LITCT (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Lithobates catesbeianus TaxID=8400 RepID=A0A2G9RVU8_LITCT) HSP 1 Score: 75.1 bits (183), Expect = 8.660e-15 Identity = 35/63 (55.56%), Postives = 45/63 (71.43%), Query Frame = 1
Query: 40 DPLDWWRINAVKFPLLAALARRLLTIPASQAQSERVFSSAGQIVTQTRNRLSSENVELLVALK 228
DPL WW+ N K+P +A +AR L +P S SERVFS+AG IVT TR+ LS +NV++LV LK
Sbjct: 153 DPLTWWKSNECKYPHIATMARCYLAVPGSSVPSERVFSTAGDIVTATRSTLSPDNVDILVFLK 215
BLAST of mRNA_A-nodosum_M_contig1156.23.1 vs. uniprot
Match: UPI001963A909 (zinc finger BED domain-containing protein 4-like n=2 Tax=Polypterus senegalus TaxID=55291 RepID=UPI001963A909) HSP 1 Score: 73.2 bits (178), Expect = 1.060e-14 Identity = 34/62 (54.84%), Postives = 46/62 (74.19%), Query Frame = 1
Query: 43 PLDWWRINAVKFPLLAALARRLLTIPASQAQSERVFSSAGQIVTQTRNRLSSENVELLVALK 228
PL WWR N+ K+PLL+ L + L+IPA+ SERVFS+AG IVT R++L ENV++L+ LK
Sbjct: 76 PLTWWRENSSKYPLLSPLVKEYLSIPATSVPSERVFSTAGDIVTAQRSQLLPENVDMLIFLK 137
BLAST of mRNA_A-nodosum_M_contig1156.23.1 vs. uniprot
Match: UPI000C26C2C9 (zinc finger BED domain-containing protein 4-like n=3 Tax=Drosophila willistoni TaxID=7260 RepID=UPI000C26C2C9) HSP 1 Score: 73.6 bits (179), Expect = 1.080e-14 Identity = 34/63 (53.97%), Postives = 48/63 (76.19%), Query Frame = 1
Query: 40 DPLDWWRINAVKFPLLAALARRLLTIPASQAQSERVFSSAGQIVTQTRNRLSSENVELLVALK 228
DPLD+W+IN ++F LA A+++L IP S +SERVFS AG+IV+Q R+RL + V +L+ALK
Sbjct: 90 DPLDYWKINEIQFGQLAKCAKKILCIPGSSVESERVFSKAGEIVSQKRSRLKPKAVNMLLALK 152 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1156.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1156.23.1 >prot_A-nodosum_M_contig1156.23.1 ID=prot_A-nodosum_M_contig1156.23.1|Name=mRNA_A-nodosum_M_contig1156.23.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=78bp MEEAQESGKILYPDPLDWWRINAVKFPLLAALARRLLTIPASQAQSERVFback to top mRNA from alignment at A-nodosum_M_contig1156:197956..198189+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1156.23.1 ID=mRNA_A-nodosum_M_contig1156.23.1|Name=mRNA_A-nodosum_M_contig1156.23.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=234bp|location=Sequence derived from alignment at A-nodosum_M_contig1156:197956..198189+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1156:197956..198189+ >mRNA_A-nodosum_M_contig1156.23.1 ID=mRNA_A-nodosum_M_contig1156.23.1|Name=mRNA_A-nodosum_M_contig1156.23.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=234bp|location=Sequence derived from alignment at A-nodosum_M_contig1156:197956..198189+ (Ascophyllum nodosum dioecious)back to top |