mRNA_A-nodosum_M_contig115.45.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig115.45.1 vs. uniprot
Match: D7G5K3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5K3_ECTSI) HSP 1 Score: 216 bits (549), Expect = 1.300e-70 Identity = 105/118 (88.98%), Postives = 111/118 (94.07%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKEVENGYPLRIEATDVQMVESDVKEDFVKNIAATLDWEALCKAASEVGMPEGSLPPALTPELLHDSSFIEALHRVLMDMHVVEGTLVCPETGRRFPITEGVPNLM 354
MRLLTHNVLRSPMK V GYPLRIEATDVQMVES+VKE+FVK++A TLDW ALCKAA+EVGMPEGSLPPALTPELL DSSF+EALHRVLMDMHVVEGTLVCPETGRRFPI EGVPNLM
Sbjct: 1 MRLLTHNVLRSPMKGVVEGYPLRIEATDVQMVESEVKEEFVKHMATTLDWGALCKAAAEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGTLVCPETGRRFPIAEGVPNLM 118
BLAST of mRNA_A-nodosum_M_contig115.45.1 vs. uniprot
Match: A0A836CHT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHT2_9STRA) HSP 1 Score: 154 bits (390), Expect = 2.490e-46 Identity = 74/118 (62.71%), Postives = 92/118 (77.97%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKEVENGYPLRIEATDVQMVESDVKEDFVKNIAATLDWEALCKAASEVGMPEGSLPPALTPELLHDSSFIEALHRVLMDMHVVEGTLVCPETGRRFPITEGVPNLM 354
MRLLTHNVLR +K VE GYPL IEA++VQM ES + DFVK+IA TL+W AL +A +VG+PE LP A++ LL D +F+ ALHRVLMD+HVV G LVCPE+GRRFPI G+P++M
Sbjct: 1 MRLLTHNVLRCAIKGVEEGYPLSIEASEVQMEESPFRPDFVKHIAPTLNWPALRQAVKQVGLPEDMLPEAVSDALLGDEAFLRALHRVLMDVHVVAGALVCPESGRRFPIAHGIPDMM 118
BLAST of mRNA_A-nodosum_M_contig115.45.1 vs. uniprot
Match: W7TQC2_9STRA (TRM112-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQC2_9STRA) HSP 1 Score: 127 bits (320), Expect = 4.130e-35 Identity = 59/118 (50.00%), Postives = 87/118 (73.73%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKEVENGYPLRIEATDVQMVESDVKEDFVKNIAATLDWEALCKAASEVGMPEGSLPPALTPELLHDSSFIEALHRVLMDMHVVEGTLVCPETGRRFPITEGVPNLM 354
MRL+THN+L+S +K V NG+PLRIEA V++ E++ +FV+N+ +DW AL A+ E+GM E LP + D SF++ +H++L+D+HV+EG+LVCPETGRRFPI G+PN++
Sbjct: 52 MRLITHNMLKSNVKGVINGFPLRIEAEKVEVKETEFNSEFVQNLLPKVDWPALRGASKELGMDE--LPEEMDEANKTDDSFLQLVHKLLLDVHVLEGSLVCPETGRRFPINNGIPNML 167
BLAST of mRNA_A-nodosum_M_contig115.45.1 vs. uniprot
Match: A0A2P6VL84_9CHLO (Multifunctional methyltransferase subunit TRM112 At1g22270 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VL84_9CHLO) HSP 1 Score: 124 bits (310), Expect = 2.960e-34 Identity = 56/118 (47.46%), Postives = 87/118 (73.73%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKEVENGYPLRIEATDVQMVESDVKEDFVKNIAATLDWEALCKAASEVGMPEGSLPPALTPELLHDSSFIEALHRVLMDMHVVEGTLVCPETGRRFPITEGVPNLM 354
M+LLTHN+L +K V+NG+P +IEA V++ E+D + DF+++I + W ALC+AA+ +G+ EG LP T E+L D +F++ H L+++H+ EG LVCPETGR+FP++ G+PNL+
Sbjct: 1 MKLLTHNMLACHIKGVQNGFPFKIEAEKVEVQEADFEPDFLQHIFPRIQWAALCEAAAAMGV-EG-LPAEATEEMLEDDAFMKKFHHALLEVHLQEGALVCPETGRKFPVSAGIPNLL 116
BLAST of mRNA_A-nodosum_M_contig115.45.1 vs. uniprot
Match: A0A1Y1INK2_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1INK2_KLENI) HSP 1 Score: 123 bits (309), Expect = 4.210e-34 Identity = 57/118 (48.31%), Postives = 82/118 (69.49%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKEVENGYPLRIEATDVQMVESDVKEDFVKNIAATLDWEALCKAASEVGMPEGSLPPALTPELLHDSSFIEALHRVLMDMHVVEGTLVCPETGRRFPITEGVPNLM 354
MRLLTHN+L +K V GYPL+IEAT + E+D F+++I LDW+AL +AA+ +G+ E LP + P L D F+ H VL+++H+ EG LVCPETGRRFP+++G+PN++
Sbjct: 1 MRLLTHNMLACNIKGVTKGYPLKIEATKTEEKETDFNAGFLRHIYPKLDWKALREAAASLGLEE--LPEQVEPSQLEDEDFLRRFHHVLLEIHLEEGALVCPETGRRFPVSKGIPNML 116
BLAST of mRNA_A-nodosum_M_contig115.45.1 vs. uniprot
Match: A0A5P1FB24_ASPOF (Uncharacterized protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FB24_ASPOF) HSP 1 Score: 122 bits (307), Expect = 8.470e-34 Identity = 57/118 (48.31%), Postives = 76/118 (64.41%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKEVENGYPLRIEATDVQMVESDVKEDFVKNIAATLDWEALCKAASEVGMPEGSLPPALTPELLHDSSFIEALHRVLMDMHVVEGTLVCPETGRRFPITEGVPNLM 354
MRLLTHN+L S +K V +GYPLRIEA E+D DF++N+ +DW AL AA +G G LP P +L F+ H L+++HV EG LVCPETGRRFP+ +G+PN++
Sbjct: 1 MRLLTHNMLASNIKGVTSGYPLRIEAHQSAAKEADFNADFLRNVFPKIDWPALVSAAKTLGY--GDLPEEAEPSMLESDEFLRRFHHALLEVHVEEGALVCPETGRRFPVNKGIPNML 116
BLAST of mRNA_A-nodosum_M_contig115.45.1 vs. uniprot
Match: UPI001425935F (multifunctional methyltransferase subunit TRM112-like protein n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425935F) HSP 1 Score: 122 bits (307), Expect = 1.110e-33 Identity = 57/118 (48.31%), Postives = 84/118 (71.19%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKEVENGYPLRIEATDVQMVESDVKEDFVKNIAATLDWEALCKAASEVGMPEGSLPPALTPELLHDSSFIEALHRVLMDMHVVEGTLVCPETGRRFPITEGVPNLM 354
M+LLTHN+L S +K V+NGYPL+IEA +V+ VE D DFV + L+W AL +AA + + G+LPP E + F++ +HRVL+++ VVEG LVCPE+GR+FP++ G+PN++
Sbjct: 9 MKLLTHNMLTSHVKGVKNGYPLKIEAQEVKTVEVDFNPDFVSRMIPKLEWRALFEAAQTLDLV-GALPPEPIAEFESNEDFLKEVHRVLLEIEVVEGNLVCPESGRKFPVSNGIPNML 125
BLAST of mRNA_A-nodosum_M_contig115.45.1 vs. uniprot
Match: I0Z8N2_COCSC (Trm112p-domain-containing protein n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z8N2_COCSC) HSP 1 Score: 122 bits (306), Expect = 1.200e-33 Identity = 54/118 (45.76%), Postives = 84/118 (71.19%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKEVENGYPLRIEATDVQMVESDVKEDFVKNIAATLDWEALCKAASEVGMPEGSLPPALTPELLHDSSFIEALHRVLMDMHVVEGTLVCPETGRRFPITEGVPNLM 354
M+LLTHN+L +K V+NG+P +IE V+ V++D DF+++I L+W+ALC+AA+ +G P LP ++ E+L D F+ + H L+++ + EG LVCPETGR+FP+ +GVPNL+
Sbjct: 1 MKLLTHNMLSCHIKGVQNGFPFKIEPVKVEQVDADYDPDFLRHIYPRLEWKALCEAAATMGAP--GLPEEVSEEMLQDDDFLRSFHHALLELVLEEGALVCPETGRQFPVHKGVPNLL 116
BLAST of mRNA_A-nodosum_M_contig115.45.1 vs. uniprot
Match: A7RGF4_NEMVE (Multifunctional methyltransferase subunit TRM112-like protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RGF4_NEMVE) HSP 1 Score: 122 bits (306), Expect = 1.240e-33 Identity = 56/118 (47.46%), Postives = 82/118 (69.49%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKEVENGYPLRIEATDVQMVESDVKEDFVKNIAATLDWEALCKAASEVGMPEGSLPPALTPELLHDSSFIEALHRVLMDMHVVEGTLVCPETGRRFPITEGVPNLM 354
MRLLTHN+L+S +K V+NG+PL IEA DVQ+ E D +F+ + L+WEAL +AA ++G + LP L D+ F++ H VL+++ V EG L+CPETGR+FP+T G+PN++
Sbjct: 1 MRLLTHNMLKSHVKGVKNGFPLAIEAQDVQVCEVDFNPEFISRMIPKLEWEALVQAAQQIGHGQ-DLPTQLAEGYESDNDFLKKAHHVLLEVEVQEGQLICPETGRKFPVTNGIPNML 117
BLAST of mRNA_A-nodosum_M_contig115.45.1 vs. uniprot
Match: UPI001CF2BFAF (multifunctional methyltransferase subunit TRM112-like protein n=3 Tax=Acropora TaxID=6127 RepID=UPI001CF2BFAF) HSP 1 Score: 122 bits (306), Expect = 1.240e-33 Identity = 56/118 (47.46%), Postives = 84/118 (71.19%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKEVENGYPLRIEATDVQMVESDVKEDFVKNIAATLDWEALCKAASEVGMPEGSLPPALTPELLHDSSFIEALHRVLMDMHVVEGTLVCPETGRRFPITEGVPNLM 354
MRLLTHN+L+S +K V+NGYPL IE ++V + E D +F+ + ++W AL +AA +VG EG LP + P+ +D F++ +H VL+++ V EG+LVCPETGR+FPI G+PN++
Sbjct: 1 MRLLTHNMLKSHVKGVKNGYPLAIEVSNVVVNEVDFNPEFISRMIPKVEWAALLQAAEQVGRSEG-LPAEVIPDYENDQEFLKKVHHVLLEVQVEEGSLVCPETGRKFPIKNGIPNML 117 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig115.45.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig115.45.1 >prot_A-nodosum_M_contig115.45.1 ID=prot_A-nodosum_M_contig115.45.1|Name=mRNA_A-nodosum_M_contig115.45.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=119bp MRLLTHNVLRSPMKEVENGYPLRIEATDVQMVESDVKEDFVKNIAATLDWback to top mRNA from alignment at A-nodosum_M_contig115:540482..545669- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig115.45.1 ID=mRNA_A-nodosum_M_contig115.45.1|Name=mRNA_A-nodosum_M_contig115.45.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5188bp|location=Sequence derived from alignment at A-nodosum_M_contig115:540482..545669- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig115:540482..545669- >mRNA_A-nodosum_M_contig115.45.1 ID=mRNA_A-nodosum_M_contig115.45.1|Name=mRNA_A-nodosum_M_contig115.45.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=357bp|location=Sequence derived from alignment at A-nodosum_M_contig115:540482..545669- (Ascophyllum nodosum dioecious)back to top |