mRNA_A-nodosum_M_contig115.35.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig115.35.1 vs. uniprot
Match: A0A2S1PRV6_FUCSE (Putative dicer (Fragment) n=1 Tax=Fucus serratus TaxID=87148 RepID=A0A2S1PRV6_FUCSE) HSP 1 Score: 1847 bits (4785), Expect = 0.000e+0 Identity = 964/1120 (86.07%), Postives = 999/1120 (89.20%), Query Frame = 2
Query: 398 IDVPECNLVIAMDKIKNSRSLIHTRGRARSKGGKFVIMVEDQDQAEQERILQILRESESIKKFQLDFEKSSLRVPLRQAHPNMVHRIERSGAVVDMDMATCLLFKTLSAVGCDFHPLLVVEDSIQPGSYKCRLELPSFLDIGTIDTDSIPGERFSTKLEARSAVCYLALLKMLEKGYIDERLDPSPKSDRLAVENRKTFDPVVSSEFEVRESREKATLPVPRPIAMGILPTPAVDVEQARLAAWEKHAKRFLPDAEWGKSAIREKASQGGVDVIPSDDVIAGEGVETVAAARAAAAGGTVAFRASVIAPSGERAIHAGAEESTDREKGVSSASESAPPMTTGDDSTAAWEDAKTPRGCYEGVPGPKRRMRVYCFRSPPGELNGWVPSSNEPRVRRATARGYKRSASGKEEGEDKSGGAKGDEDNEALKGKPAEEDGEDGGDDEVNLPTFNPKLGVDVGQGPGIGLGPRLYVGLASAAPLPLTAAQADKVGIEDSFDVDLNPAQLAAIVQWHRETLGMVALYKIPHQLTRTPQMDPEKCPFRNAGEVGDKGVVAVPVEFVETSGGGGGAPRIDWAAIEAANAGMMQPSSDTDEEYARRILFARANHKTCRFYFVLERTSTTLGDYLQQRLESTMRPGAGVPYGTISHHPACKYGHARGSLAVVRGVHEHDYEAACKSQRLLLGVPVPALRHPFVQHLIRGERTMDPDAGVRRRVLLSQRAGSEKPGASIPEDEATNKPEGVPD--GVYREGYGVHTVHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAGVSTLKSNKHGVQTTRPVLLLEQYTQVVCMTRQVFVSVMHIVPRMFDLERQLLCFVLHEAVFLPALQASLWHRCPLLFSNASNDSDQTGTQADESPXXXXXXXL-GTQLIPDDASIGDGSATSMASPSPAQTSGKVIDASLEGDATRWDRKLSADTTEALPASPPADDSTVPSGAEAIHWPPNGVWNAPGGGGGIACGPVRTMTSDRGGDMGRGGEAKIEAAAVGVVQWQGGSEGAVADTLSLLDCSLRRPINERLETLGDAWLNFYAAFVIFQDKPVIKEEGMMTFLRKNIVCNARLIKCADGRGLREFIYPPRTILGRSFEMWLPSLLP 3748
IDVPECNLVIAMDKIKNSRSLIHTRGRARSKGGKFVIMVEDQDQAE+ERILQILRESE+IKKFQL EK SLRVPLRQAHPNMVHRIERSGAVVDMDMATCLLF+TLS GCDF PLLVVEDSIQP S+KCRLELPSFLD+GTIDTDSIPGERFSTK EARSA CYLALLKMLEKGY+DERL+PS KSDRLAVENRKTFDPVV E EVRESREKATLPVPRPIAMGILPTPAVDVEQARLAAWEKHAKRFLPDAE GKSA++EK QGGVDVIP DDV+ G+GV T A ARAAAAGG VAFRASVIA SG RA + G EESTDREK VSSASESAPPMTTGDDS AAWEDAK PRGCYEGVPGPKRRMRVYCFRSPP ELN WVPSSNEPR RRATA YKRSASGK EGED+SGGAKG ED+E LK +PAEEDG DGGDDE N PTFNPKLGVDVGQGPG GLGPRLYVGLASAAPLPLTA QADKVGIEDSFDVDLNPAQLA+IVQWHRETLGMVALYKIPHQLTRTPQMDPEKCPFR+AGEVGDKG+VAVPVEFVETS GGGGAPRIDW AIEAANAGMM PSSDTDEEYARRILFAR +HKTCRFYFVLERTSTTL DYLQ+RLES M+PGAGVPYGTISHHPACKYG+ARGSLAVVRG+HEHDY+AACKSQRLLLGVPVPALRH FVQHL+RGER MDPDAGVRRRVLLSQRAGSEKPGASIPEDEATNKPEG PD GVYREGYGVHTVH WAGVSTLKSNKHGVQTTR VLLLEQYTQVVCMTRQVFVSVMHIVPRMFDLERQLLCFVLHEAVFLPALQASLWHRCPLL NAS+DSDQTGT+ADESP G QLI DDASIGDGSATSM S PAQTSG VI ASLE D TRWDR LSAD TEA PAS PADDSTVPSGAEAI+WPPNGVWNAPGGG GIA GP RTMTSD GGD+GRG EAK+E AAVG VQWQGGSEG+VADTLSLLDCSLRRPINERLETLGDAWLNFYA FVIFQDKPV++EEGMMTFLRKNIV NARL+KCADGRGLREFIYPPRTILG+ FEMW PSLLP
Sbjct: 1 IDVPECNLVIAMDKIKNSRSLIHTRGRARSKGGKFVIMVEDQDQAERERILQILRESENIKKFQLGSEKPSLRVPLRQAHPNMVHRIERSGAVVDMDMATCLLFETLSTTGCDFQPLLVVEDSIQPASFKCRLELPSFLDMGTIDTDSIPGERFSTKSEARSAACYLALLKMLEKGYLDERLNPSQKSDRLAVENRKTFDPVVPLEVEVRESREKATLPVPRPIAMGILPTPAVDVEQARLAAWEKHAKRFLPDAERGKSAMQEKGFQGGVDVIPFDDVVVGQGVATAAEARAAAAGGAVAFRASVIASSGGRATNVGTEESTDREKCVSSASESAPPMTTGDDSAAAWEDAKRPRGCYEGVPGPKRRMRVYCFRSPPRELNAWVPSSNEPRTRRATAGDYKRSASGKVEGEDESGGAKGVEDDETLKEEPAEEDGGDGGDDEANFPTFNPKLGVDVGQGPGKGLGPRLYVGLASAAPLPLTATQADKVGIEDSFDVDLNPAQLASIVQWHRETLGMVALYKIPHQLTRTPQMDPEKCPFRDAGEVGDKGIVAVPVEFVETSAGGGGAPRIDWVAIEAANAGMMPPSSDTDEEYARRILFARTSHKTCRFYFVLERTSTTLDDYLQRRLESNMKPGAGVPYGTISHHPACKYGYARGSLAVVRGIHEHDYKAACKSQRLLLGVPVPALRHSFVQHLMRGERVMDPDAGVRRRVLLSQRAGSEKPGASIPEDEATNKPEGAPDDNGVYREGYGVHTVH--EVDETNEAEDDRDDGGGRKRAGGESIEGWAGVSTLKSNKHGVQTTRAVLLLEQYTQVVCMTRQVFVSVMHIVPRMFDLERQLLCFVLHEAVFLPALQASLWHRCPLLPPNASDDSDQTGTKADESPGTKADASSSGIQLILDDASIGDGSATSMTSLPPAQTSGGVIGASLESDPTRWDRNLSADATEAPPASTPADDSTVPSGAEAINWPPNGVWNAPGGGVGIAYGPGRTMTSDHGGDLGRGEEAKVEIAAVGAVQWQGGSEGSVADTLSLLDCSLRRPINERLETLGDAWLNFYAGFVIFQDKPVMREEGMMTFLRKNIVSNARLVKCADGRGLREFIYPPRTILGQPFEMWAPSLLP 1118
BLAST of mRNA_A-nodosum_M_contig115.35.1 vs. uniprot
Match: A0A6H5KQM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM7_9PHAE) HSP 1 Score: 924 bits (2388), Expect = 6.040e-291 Identity = 638/1362 (46.84%), Postives = 779/1362 (57.20%), Query Frame = 2
Query: 329 ESIHLFRVGELQVLVTTDACSEGIDVPECNLVIAMDKIKNSRSLIHTRGRARSKGGKFVIMVEDQDQAEQERILQILRESESIKKFQLDFEKSSLRVPLRQAHPNMVHRIERSGAVVDMDMATCLLFKTLSAVGCDFHPLLVVEDSIQP------------GSYKCRLELPSFLDIGTIDTDSIPGERFSTKLEARSAVCYLALLKMLEKGYIDERLDPSPKSDRLAVENRKTFDPVVSSEFEVRESREKATLPVPRPIAMGILPTPAVDVEQARLAAWEKHAKRFLPDAEWGKSAIREKASQGGVDVIPSDDVIAGEGVETVAAARAAAAGGTVAFRASVIAPSGERAIHAGAEESTDREKGVSSASESAPPMTTGDDSTAAWEDAKTPRGCYEGVPGPKRRMRVYCFRSPPGELNGWVPSSNEPRVRRATARGYKRSASGKEE---GEDKSGGAKGDEDN-------EALKGKPAEEDGEDGGDDEVNLPTFNPKLGVDVGQGPGIGLGPRLYVGLASAAPLPLTAAQADKVGIEDSFDVDLNPAQLAAIVQWHRETLGMVALYKIPHQLTRTPQMDPEKCPFRNAGEV-------------------------------------------GDKGVVAVPVEFVETSGGGGGAPRIDWAAIEAANAGMMQPSSDTDEEYARRILFARA----------------------NHKTCRFYFVLERTSTTLGDYLQQRLESTMRPGAGVPYGTISHHPACKYGHARGSLAVVRGVHEHDYEAACKSQRLLLGVPVPALRHPFVQHLIRGERTMDPDAGVRRRVLLSQRAGSEKPGASIPEDEATNKPEGVPDGVYREGYGVHT---------------------------------------------------VHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAGVSTLKSNKHGVQTTRPVLLLEQYTQVVCMTRQVFVSVMHIVPRMFDLERQLLCFVLHEAVFLPALQASLWHRCPLLFSNASNDSDQTGTQADESPXXXXXXXLGTQLIPDDASIGDGSATSMASPSPAQTSGKVIDASLEGDATRWDRKLSADTTEALPASPPADDSTVPS-GAEAIHWP------------------PNGVWNAPGGGGGIACGPVRTMTSDRGGD-MGRGG---------EAKIEAAAVGVVQWQGGSEGAVADTLSLLDCSLRRPINERLETLGDAWLNFYAAFVIFQDKPVIKEEGMMTFLRKNIVCNARLIKCADGRGLREFIYPPRTILGRSFEMWLPSLLPLPPAVEVNQKIIADVVEALLGAALVAGGNRSAAFLMEWLGLPTLEASNNPDKPLE 3913
++I++FR GE+Q+LVTTDACSEGIDVPECNLV++MDKIK SRSLIHTRGRARSKGGKFVIMVED D E++R+ +L ESE IK+FQL EK+S+RVPLR +HPNMVH IE SGAVVDMDMAT L+ + LSAVGCDFHPLL+ E+ P S+KCRLELPSF+ + TIDT + E F +K +AR+AV +LA+++MLEKGYIDERL+P+ DRL VE R+ +DPV+ E +E+R KA +P+PRP+AMGILPTP V+ + A +AAW A G A E T A A + P A+ G+E A WE A+T RGCYE PGPKRRMRVYCFRSP GE GWVP+ R RR+ G ++ +E+ GED++ +G E L EE+ + E ++ +F+PKL VD+G+GPG GLGPRL+VGLASAAPLPLTAAQA KVGI DSFDVDLNP Q+AAIVQWH+ET+GM ALY+IPHQ+T+TP DP K PFR G GDKGV+AVPV++ + G G +IDW AIEAANAG+ P TDE+Y RRILF+R +HKTCRFYF+LERT+TTL YL++ LES P AG+P TI+ H A + G +G LAV GV + DY+AA KSQRLLLGVP PAL+H F QHL+RGE+ MDPDAGVR RV + G + G ++ +E + P D E GV XXXXXXXXXXXXXXXXXXXXXXXX WAGVSTLK N H V +PVLL+EQY Q VC TR+VF+SV+H + L +A P+ + L P S A+ + XXXXXXX + A DA E D + A A PP +P GA P P+G+ +APG G GPV ++ RGG G+ G +A AAAVGV++W GG EGAV DT++LLDCSLRRP+NERLETLGDAWLN+YA FV DKPV+ EEGMMT LRKN+V NARL+KCADGRGLREF+YPPR+ILGR F+MW PSLLPLPP V+ ++K IADVVEALLGAALVAGGNRSAA++MEWLGLPTLE+SN+P+K E
Sbjct: 644 QTINMFRAGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMVEDGDDRERDRVSLMLMESEDIKRFQLGHEKASVRVPLRHSHPNMVHHIESSGAVVDMDMATPLMNQALSAVGCDFHPLLIAEEKSGPCEAPFGAMMYREPSFKCRLELPSFMGMPTIDTAVLVDEHFWSKSQARAAVSFLAVVQMLEKGYIDERLNPTRTKDRLVVEKRRGYDPVL---VEGKEARMKAKMPIPRPVAMGILPTPGVEFDAAWMAAWM---------AADGNGASNEXXXXXXXXXXXXXXXXXXXXXXTAATAGS---------------PPSTCAVGDGSEGGXXXXXXXXXXXXXXXXXXXA--GFAVWEGART-RGCYEDDPGPKRRMRVYCFRSPAGEAEGWVPTLKRVRKRRSELDGSEKILEEEEDEVQGEDRAAAKEGXXXXXXXXXXXEVL----VEEE-----EHEADIRSFHPKLKVDLGRGPGKGLGPRLFVGLASAAPLPLTAAQAAKVGIVDSFDVDLNPVQMAAIVQWHKETVGMAALYEIPHQMTQTPLNDPAKSPFRAGGSELPERARCSGRGAHTDTGDNLQTCSLVCLRLQQTRASLKETGVEGDKGVLAVPVDYGDDGPAGDGVVKIDWPAIEAANAGVHLPDK-TDEQYTRRILFSRVGKSSFAGRSLLVGKRFLGKAEVSHKTCRFYFILERTTTTLEVYLRRCLESDQGPYAGLPCETITSHDAGRMGRVKGVLAVGHGVRKPDYDAADKSQRLLLGVPAPALKHSFAQHLVRGEKVMDPDAGVRSRVKVDGAMGVTEKGENL--EEPGDAPSPAADAAGTEQQGVDAEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEARGWAGVSTLKLNNHKVGPGQPVLLVEQYCQPVCCTRRVFISVLHASSGQAVSAQGLAA---SDAAPAPSESSQLLRLSP---SGAAQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGA-------DAVAESDEAGGLLSVPEHDAAAADAWPPCGTWCIPGEGAGTXXXPGGSGCNADKPEEPSALGAPSGIMSAPGNG----LGPVSGDSATRGGKGAGKIGVEAAXXXXAQAAARAAAVGVIKWNGGEEGAVTDTMALLDCSLRRPVNERLETLGDAWLNYYAGFV---DKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLPLPPPVKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGLPTLESSNDPEKAKE 1943
BLAST of mRNA_A-nodosum_M_contig115.35.1 vs. uniprot
Match: D7FZW2_ECTSI (Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW2_ECTSI) HSP 1 Score: 874 bits (2257), Expect = 6.080e-283 Identity = 679/1767 (38.43%), Postives = 817/1767 (46.24%), Query Frame = 2
Query: 20 WAGKGEHLRCMVFVERRTTAMLLCEYLSHCLNGRLNCGFVVGRSNSRDSSFLRGNRDGHDAADEREEEGALDDRAGGLGTRKLDTSRGSVGEHDHKAKKNGVDESIHLFRVGELQVLVTTDACSEGIDVPECNLVIAMDKIKNSRSLIHTRGRARSKGGKFVIMVEDQDQAEQERILQILRESESIKKFQLDFEKSSLRVPLRQAHPNMVHRIERSGAVVDMDMATCLLFKTLSAVGCDFHPLLVVEDSIQPGSYKCRLELPSFLDIGTIDTDSIPGERFSTKLEARSAVCYLALLKMLEKGYIDERLDPSPKSDRLAVENRKTFDPVVSSEFEVRESREKATLPVPRPIAMGILPTPAVDVEQARLAAWEKHAKRFLPDAEWGKSAIREKASQGGVDVIPS--DDVIAGEGVETVAAARAAAAGGTVAFRASVIAPSGERAIHAGAEESTDREKGVSSASESAPPMTTGDDSTAAWEDAKTPRGCYEGVPGPKRRMRVYCFRSPPGELNGWVPSSNEPRVRRATARGYKRSASGKEEGEDKSGGAKGDEDNEALKGKPAEEDGEDGGDDEVNLPTFNPKLGVDVGQGPGIGLGPRLYVGLASAAPLPLTAAQADKVGIEDSFDVDLNPAQLAAIVQWHRETLGMVALYKIPHQLTRTPQMDPEKCPFRNAGEVGDKGVVAVPVEFVETSGGGGGAPRIDWAAIEAANAGMMQPSSDTDEEYARRILFARANHKTCRFYFVLERTSTTLGDYLQQRLESTMRPGAGVPYGTISHHPACKYGHARGSLAVVRGVHEHDYEAACKSQRLLLGVPVPALRHPFVQHLIRGERTMDPDAGVRRRVLLSQRA------GSEKPGASIPEDEATNKPEGVPDGVYREGYGVHTVHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAGVSTLKSNKHGVQTTRPVLLLEQYTQVVCMTRQVFVSVMHIVPRMFDLERQLLCFVLHEAVFLPALQASLWHRCPLLFSNASNDSDQTGTQADESPXXXXXXXLGTQLIPDDASIGDGSATSMASPSPAQTSGKVIDASLEGDATRWDRKLSADTTEALPASPPADDSTVPSGAEAIHWPPNGVWNAPGGGGGIACGPVRTMTSDRGGDMGRGGEAKIEAAAVGVVQWQGGSEGAVADTLSLLDCSLRRPINERLETLGDAWLNFYAAFVIFQDKPVIKEEGMMTFLRKNIVCNARLIKCADGRGLREFIYPPRTILGRSFEMWLPSLLPLPPAVEVNQKIIADVVEALLGAALVAGGNRSAAFLMEWLGLPTLEASNNPDKPLEQQQPREPEIDRDDDPGVADSDSSTRPSEPEGIKKGEDCGDEGNASDVARKLSAGVNMNRGASRRRAPLSDHAPEVHDKARPWLWKPPAYMRHVLEWGSTGFGDLDKPHERGVSRRNDRTGAGSRTTDCPGDRGTGRVVSSSDSSDSEGTVEPKATASRESDEVMASERRACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSPDAQQEPITRKDSPAGEGVSGEGEERRQEREHNTELLLEGLKGSARWPIRREPLMSVGFLVDTGVLPKVYMTTKPSARLMGSIGRLEQELSYTFKHPWLCIQAITHPSWTMFDRTWKHSIADDVVDQERAGGGSRAEPATVPAQDYQRLEFLGDAVLGWLVTAHLYFASSTFTPAELTIIK--ASCVCNSSLWLIAIKLNIHHVLRASPKILENIHAFIENQDSRNTWRYGKSSPPKHPADVLEALIGAVFLDSSCCM 5290
W + ++ RCMVFVERR TA +L +LSH L+GR CGFVVGR+N+R F R + + ++I++FR GE+Q+LVTTDACSEGIDVPECNLV++MDKIK SRSLIHTRGRARSKGGKFVIMVED D E++R+ +L ESE IK+FQL EK+S+RVPLR +HPNMVH IE SGAVVDMDMAT L+ + LSAVGCDFHPLL+ CRLELPSF+ + TIDT + E F +K +ARSAV +LA+++MLEKGYID+RL+P+ R KA PR + G +P ++A+ P+A+ A E A+ G P D GEG + P G A G+ A+ A A WE A+T RGCYE PGPKRRMRVYCFR+ E E L EE+ + E ++ +F+PKL VD+G+GPG GLGPRL+VGLASAAPLPLTA+QA KVGI DSFDVDLNPAQ+AAIVQWH+ET+GM ALY+IPHQ+ +TP DP K PFR + V+AVPV++ + G G +IDW AIEAANAG+ P TDE T+TTL YL++ LES P AG+P TI+ H A + G +G LAV GV + DY+AA KSQRLLLGVP PAL+H F QHL+RGE+ MDPDAGVR RV + + + + GA ++ + PE D T XXXXXXXXXXXXXXXXXXXXXXXXXXXXX + RP E + + IVPRMFDLERQLLCFVLHE++FLPALQ SL+HR P +SND K++ P+NERLETLGDAWLN+YA FV+FQDKPV+ EEGMMT LRKN+V NARL+KCADGRGLREF+YPPR+ILGR F+MW PSLLPLPP V+ ++K IADVVEALLGAALVAGGNRSAA++MEWLGL AS G D A P LP+VY+ TKPSARLMG+I LE+ L YTF++PWLC+QAITHPSWT+ D P TVPAQDYQRLEFLGDAVLGW+VTAHLYFASS FTPAELT IK +SCVCN+SLW+IA++L++HHVLRASPKIL +IHAFIEN T + PKHPADVLEALIGAVF+DSSCCM
Sbjct: 383 WGDEAKNFRCMVFVERRATARVLSAFLSHSLSGRFCCGFVVGRANARGDDFGR----------------------------------------------SRMAQTINMFRAGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMVEDGDDMERDRVSLMLMESEDIKRFQLGHEKASVRVPLRHSHPNMVHHIESSGAVVDMDMATPLMNQALSAVGCDFHPLLI-----------CRLELPSFMGMPTIDTAMLADEHFWSKSQARSAVSFLAVVQMLEKGYIDKRLNPT---------------------------RGKAAWLRPR--SGGGEGSPHQGQDEAK-----------SPEAD----APSETAATAGSPPFPGAFGDGSQGEGD---------------------VQPGGPGA------------PGIGPAAAGA--------GFAVWEGART-RGCYEDDPGPKRRMRVYCFRTSAKEGEXXXXXXXXXX--------------------------------EVL----VEEE-----EHEADMRSFHPKLKVDLGRGPGKGLGPRLFVGLASAAPLPLTASQAAKVGIVDSFDVDLNPAQMAAIVQWHKETVGMAALYEIPHQMMQTPLNDPAKSPFRVS-------VLAVPVDYGDDGPAGDGVVKIDWPAIEAANAGVHLPDK-TDE------------------------TTTTLEIYLRRCLESDQGPYAGLPCETITPHDAGRMGRVKGVLAVGHGVRKPDYDAADKSQRLLLGVPAPALKHSFAQHLVRGEKVMDPDAGVRSRVKVKRPSKKSLEDDGQVDGAMGVTEKGEDNPEERGDAPSPAADAAGTEQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVV------EAPVERPAASSESAAGEMAVEAA-------IVPRMFDLERQLLCFVLHESLFLPALQTSLYHRNPPGADKSSND-------------------------------------------------KLL-----------------------------------------------------------------------------------------------------------------PVNERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLPLPPPVKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGLAA-------------------------------------------------------ASXXXXXXXXG---------------------EDPAAP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLPEVYVATKPSARLMGNIRLLEKRLGYTFRYPWLCMQAITHPSWTIND----------------------IPPGTVPAQDYQRLEFLGDAVLGWMVTAHLYFASSAFTPAELTRIKVTSSCVCNASLWVIALRLDVHHVLRASPKILGHIHAFIENNGVSGT-----GTAPKHPADVLEALIGAVFIDSSCCM 1469
BLAST of mRNA_A-nodosum_M_contig115.35.1 vs. uniprot
Match: A0A835Z3Y3_9STRA (Ribonuclease III domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Y3_9STRA) HSP 1 Score: 120 bits (301), Expect = 1.460e-24 Identity = 62/134 (46.27%), Postives = 90/134 (67.16%), Query Frame = 2
Query: 3485 LDCSLRRPINERLETLGDAWLNFYAAFVIFQDKPVIKEEGMMTFLRKNIVCNARLIKCADGRGLREFIYPPRTILGRSF-EMWLPSLLPLP-PAVEVNQKIIADVVEALLGAALVAGGNRSAAFLMEWLGLPTL 3880
++ ++RRP NERLETLGDAWL Y I Q +P+++EEG+++ R N+VCNARL K A L +++P R++LGR F E W+P+L+ P P +V K AD VEA+LG L+ GG + ++ ++GLPTL
Sbjct: 53 VEVAVRRPANERLETLGDAWLKAYMCLFIMQTRPILQEEGLISEFRSNLVCNARLTKEAVKCDLVSYMHPLRSMLGRPFLEHWMPALMAPPSPGPQVGWKTPADCVEAILGCCLILGGEAAPQAMLRFVGLPTL 186
BLAST of mRNA_A-nodosum_M_contig115.35.1 vs. uniprot
Match: A0A4D9CT29_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CT29_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.400e-17 Identity = 101/353 (28.61%), Postives = 157/353 (44.48%), Query Frame = 2
Query: 20 WAGKGEHLRCMVFVERRTTAMLLCEYLSHCLNGRLNCGFVVGRSNSRDSSFLRGNRDGHDAADEREEEGALDDRAGGLGTRKLDTSRGSVGEHDHKAKKNGVDESIHLFRVGELQVLVTTDACSEGIDVPECNLVIAMDKIKNSRSLIHTRGRARS-KGGKFVIMVEDQDQAEQERILQILRESESIKKFQLDFEKSSL-RVPLRQAH--PNMVHRIERSGAVVDMDMATCLLFKTLS-AVGCDFHPLL-VVEDSIQPGS-----YKCRLELPSFLDIGTIDTDSIPGERFSTKLEARSAVCYLALLKMLEKGYIDERLDPSPKSDRLAVENRKTFDP------VVSSEFEVR 1027
W E+ R +VFV+RRTT +L E+L+ + CGFV+G+++ A GL T L K +I F G+L++LV TD SEGIDVP+C+LV+A D + NS + + RGRAR GG FV+ DQ E ++ + + + +K D E S L R + AH P + + +GA + ++ + LL + C + LL VE S + S +KC L LP + ++ P KL AR+ Y A ++ G++D+ D +P + L +E + F P VV+ E++
Sbjct: 395 WQQDRENFRALVFVQRRTTCRVLYEFLNIWDSFAGLCGFVIGQAS-----------------------------ASGLTTFGL---------------KRKYKRAIEEFASGKLKILVATDVLSEGIDVPDCSLVVAFDTVANSTAFVQMRGRARQHNGGAFVLFASDQGGLE--KLFDLEQGAAIFEKDVDDMEMSYLERKDMSFAHSFPQFSYAVPATGATITLNNSISLLNQLCQWNKDCVSYQLLPTVEYSERVVSREGVMFKCLLTLPDVFGLPVFESSFFPA-----KLIARAVAAYHACIEFHRCGFVDD--DFNPVRESLQLEAYEHFVPEFYGSQVVNERLEIK 694
BLAST of mRNA_A-nodosum_M_contig115.35.1 vs. uniprot
Match: A0A819C2V1_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A819C2V1_9BILA) HSP 1 Score: 92.4 bits (228), Expect = 4.040e-17 Identity = 61/204 (29.90%), Postives = 101/204 (49.51%), Query Frame = 2
Query: 4766 SIGRLEQELSYTFKHPWLCIQAITHPSWTMFDRTWKHSIADDVVDQERAGGGSRAEPATVPAQDYQRLEFLGDAVLGWLVTAHLYFA-SSTFTPAELTIIKASCVCNSSLWLIAIKLNIH-HVLRASPKILENIHAFIENQD------------SRNTWRYGKSSPPKHPADVLEALIGAVFLDSSCCMETVSRVFWPLIAQYL 5335
+ +E ++ Y F++ I A THPS + ++ ++D Y+RLEFLGDA+L +LVT H++ + TP +T I+ + N L I + +H +L SP + + I ++I N++ ++N ++ S+ PK ADV EAL+GA+F DS +ETV +V PL+ +YL
Sbjct: 31 AFNEIETKIQYVFQNKAYLIAAFTHPS----------NFSNPIIDS------------------YERLEFLGDAILDFLVTRHVFVNYNENMTPGRVTNIRQDLLNNDRLAYILVACGLHTKILHNSPNLFDEISSYIHNENLFSKNQSTDQYLNKNLDQWADSTAPKALADVFEALVGAIFFDSGNSLETVWQVIEPLLRKYL 206
BLAST of mRNA_A-nodosum_M_contig115.35.1 vs. uniprot
Match: A0A654H4D7_9CEST (Uncharacterized protein n=1 Tax=Sparganum proliferum TaxID=64606 RepID=A0A654H4D7_9CEST) HSP 1 Score: 99.4 bits (246), Expect = 7.560e-17 Identity = 71/239 (29.71%), Postives = 103/239 (43.10%), Query Frame = 2
Query: 4778 LEQELSYTFKHPWLCIQAITHPSWTMFDRTWKHSIADDVVDQERAGGGSRAEPATVPAQDYQRLEFLGDAVLGWLVTAHLYFASSTFTPAELTIIKASCVCNSSLWLIAIKLNIHHVLRAS-PKILENIHAFIENQ----------------DSRNTWRYGKSSPPKHPA--------------------------------------DVLEALIGAVFLDSSCCMETVSRVFWPLIAQ 5329
LE+ + Y FK+P L +QA THPS+ R ++ P T + YQRLEFLGDAVL +L+T L+ S +P LT ++++ V N+ + +++ +H LRAS P + I AF+ Q + + T G S PP P D+ E+L GAVF+DS C+ TV RVF+PLI +
Sbjct: 1912 LEKMIGYKFKNPLLLLQACTHPSYYQLRRPMYSP-------EDFTSADCELPPQTTDVECYQRLEFLGDAVLDYLITRFLFEDSHNHSPGVLTDLRSALVNNNIFAALTVRIGLHRFLRASSPSLFHAIDAFVRFQKEIANDDLDFITSQDIEIKETPAIGSSGPPSAPVTEDDGAGAAGAVNADASSGPFVPGARPLDEVEIPKALGDIFESLAGAVFIDSDLCLNTVWRVFYPLIKE 2143
BLAST of mRNA_A-nodosum_M_contig115.35.1 vs. uniprot
Match: A0A226DKF2_FOLCA (Endoribonuclease Dcr-1 n=2 Tax=Folsomia candida TaxID=158441 RepID=A0A226DKF2_FOLCA) HSP 1 Score: 97.1 bits (240), Expect = 3.600e-16 Identity = 77/241 (31.95%), Postives = 116/241 (48.13%), Query Frame = 2
Query: 4658 RWPIRREPLMSVGF--LVDTGVLPKVYMTTKPSARLMG-SIGRLEQELSYTFKHPWLCIQAITHPSWTMFDRTWKHSIADDVVDQERAGGGSRAEPATVPAQDYQRLEFLGDAVLGWLVTAHLYFASSTFTPAELTIIKASCVCNSSLWLIAIKLNIHHVL-RASPKILENIHAFIENQDSRNTWRYGKS---------------SPPKHPADVLEALIGAVFLDSSCCMETVSRVFWPLI 5323
R P +P+ + + + D L VY +P + G S+ LEQ L Y FK+ W+ ++A THPS+T H+ G + A YQRLEFLGDAVL +LVT H+Y T LT ++++ V N + A++ H +L + SP++ E+I F++ Q+ RN S PK D+ E+L GAVF+DS ++TV VF+ L+
Sbjct: 1522 RAPTNEKPVNQIMYQNIKDLPRLKNVY-PKEPQNLIYGPSVDYLEQVLDYKFKNKWIIVEAFTHPSYT-------HN------------GSTNA---------YQRLEFLGDAVLDFLVTHHIYNTQKKVTAGSLTDLRSALVNNVTFGSQAVRYGFHKLLLQFSPRLQESIDKFVKYQE-RNNHEVSDSFELLTDNDCVMAEDIDVPKALGDIFESLAGAVFIDSGMSLDTVWTVFYRLM 1732
BLAST of mRNA_A-nodosum_M_contig115.35.1 vs. uniprot
Match: A0A183QKW4_9TREM (Uncharacterized protein n=1 Tax=Schistosoma rodhaini TaxID=6188 RepID=A0A183QKW4_9TREM) HSP 1 Score: 96.7 bits (239), Expect = 3.860e-16 Identity = 74/243 (30.45%), Postives = 115/243 (47.33%), Query Frame = 2
Query: 4751 ARLMGSIGRLEQELSYTFKHPWLCIQAITHPSWTMFDRTWKHSIADDVVDQERAGGGSRAEPATVPAQDYQRLEFLGDAVLGWLVTAHLYFASSTFTPAELTIIKASCVCNSSLWLIAIKLNIHHVLRAS-PKILENIHAFI------------------ENQDSR--------NTWRYGKSSP-----------------------PKHPADVLEALIGAVFLDSSCCMETVSRVFWPLIAQ 5329
ARL+ LE L+YTFK P L IQA THPS+ S +++ DQ + YQRLEFLGDAVL +++T LY S +P LT ++++ V N+ +A+++ +H RAS P++L I F+ ENQ S+ + + GKS+ PK +D+ E+L GA+FLDS+ ++TV ++F+P++ +
Sbjct: 809 ARLVWRFDELESSLNYTFKDPSLLIQAFTHPSYHQLRVL---STTNNLSDQSNL-------MFSTDLDCYQRLEFLGDAVLDYVITRFLYEDSKQHSPGVLTDLRSALVNNNIFAALAVRIGLHKYFRASSPQLLHTIDVFVRYQKDVAKDDLDFITNESENQSSKPQHQTYEQHLSKSGKSNNANNTIPTNTGHLTTNRLSDDVEIPKALSDIFESLAGAIFLDSNFSLDTVWQIFYPIMKE 1041
BLAST of mRNA_A-nodosum_M_contig115.35.1 vs. uniprot
Match: A0A817GAM0_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817GAM0_9BILA) HSP 1 Score: 90.5 bits (223), Expect = 4.970e-16 Identity = 54/139 (38.85%), Postives = 78/139 (56.12%), Query Frame = 2
Query: 4958 YQRLEFLGDAVLGWLVTAHLYFASSTFTPAELTIIKASCVCNSSLWLIAIKLNIH-HVLRASPKILENIHAF------------IENQDSRNTWRYGKSSPPKHPADVLEALIGAVFLDSSCCMETVSRVFWPLIAQYL 5335
Y+RLEFLGDAVL +LVT H++ ++ TP +T I+ N L I + +H +L SP + I + I NQ S++ ++ S+ PK ADV EAL+GA+FLDS C++TV V PL+ QY+
Sbjct: 36 YERLEFLGDAVLDFLVTRHIFVNNTNITPGLVTDIRQDLSNNGRLAYILVAYRLHTKILHNSPDLFGKISVYAGDNDLFPKDSSIYNQLSKDIDQWADSTAPKALADVFEALVGAIFLDSDKCLQTVWNVIKPLLQQYI 174 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig115.35.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig115.35.1 >prot_A-nodosum_M_contig115.35.1 ID=prot_A-nodosum_M_contig115.35.1|Name=mRNA_A-nodosum_M_contig115.35.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1774bp MVFVERRTTAMLLCEYLSHCLNGRLNCGFVVGRSNSRDSSFLRGNRDGHDback to top mRNA from alignment at A-nodosum_M_contig115:330600..372792+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig115.35.1 ID=mRNA_A-nodosum_M_contig115.35.1|Name=mRNA_A-nodosum_M_contig115.35.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=42193bp|location=Sequence derived from alignment at A-nodosum_M_contig115:330600..372792+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig115:330600..372792+ >mRNA_A-nodosum_M_contig115.35.1 ID=mRNA_A-nodosum_M_contig115.35.1|Name=mRNA_A-nodosum_M_contig115.35.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=5322bp|location=Sequence derived from alignment at A-nodosum_M_contig115:330600..372792+ (Ascophyllum nodosum dioecious)back to top |