mRNA_A-nodosum_M_contig11487.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig11487.1.1 vs. uniprot
Match: A0A6H5KVS5_9PHAE (GUN4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVS5_9PHAE) HSP 1 Score: 144 bits (362), Expect = 1.090e-40 Identity = 62/72 (86.11%), Postives = 69/72 (95.83%), Query Frame = 2
Query: 95 RGDFENFCRRIGWTTTNSEVERKLRWFGANEFIYDVDKAPKGHLPLTSALRGTTLLKELMTHPVWDTE*QWK 310
+GDFENFCRRIGWTT ++EVERKLRWFGANEFIYDVD+AP+GHLPLTSALRGTTLLKELM HPVW+TE +WK
Sbjct: 186 KGDFENFCRRIGWTTMDAEVERKLRWFGANEFIYDVDRAPRGHLPLTSALRGTTLLKELMMHPVWETEWEWK 257
BLAST of mRNA_A-nodosum_M_contig11487.1.1 vs. uniprot
Match: A0A836C7C7_9STRA (GUN4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7C7_9STRA) HSP 1 Score: 130 bits (327), Expect = 8.850e-36 Identity = 55/70 (78.57%), Postives = 63/70 (90.00%), Query Frame = 2
Query: 89 RRRGDFENFCRRIGWTTTNSEVERKLRWFGANEFIYDVDKAPKGHLPLTSALRGTTLLKELMTHPVWDTE 298
R++GDFENFCR IGW T + E+ERKLRWFGANEFIYD ++APKGHLPLTSALRGT LLKEL+ HPVW+TE
Sbjct: 152 RKKGDFENFCRTIGWNTKSEEIERKLRWFGANEFIYDAERAPKGHLPLTSALRGTQLLKELLNHPVWETE 221
BLAST of mRNA_A-nodosum_M_contig11487.1.1 vs. uniprot
Match: A0A8J9TSA2_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TSA2_PHATR) HSP 1 Score: 123 bits (309), Expect = 2.330e-34 Identity = 52/72 (72.22%), Postives = 63/72 (87.50%), Query Frame = 2
Query: 95 RGDFENFCRRIGWTTTNSEVERKLRWFGANEFIYDVDKAPKGHLPLTSALRGTTLLKELMTHPVWDTE*QWK 310
+GDFE FCR+IGWT T+ E+ERK RWFGA+EFIYDV KAP+GHLPLTSALRGT+L+K+++ HPVWD E WK
Sbjct: 46 KGDFEAFCRKIGWTATDGEIERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKQILNHPVWDDE-DWK 116
BLAST of mRNA_A-nodosum_M_contig11487.1.1 vs. uniprot
Match: A0A1Z5KQ11_FISSO (GUN4 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQ11_FISSO) HSP 1 Score: 125 bits (314), Expect = 8.480e-34 Identity = 55/72 (76.39%), Postives = 63/72 (87.50%), Query Frame = 2
Query: 95 RGDFENFCRRIGWTTTNSEVERKLRWFGANEFIYDVDKAPKGHLPLTSALRGTTLLKELMTHPVWDTE*QWK 310
+GDFE FCR+IGWTTT+ EVERK RWFGA+EFIYDV KAP+GHLPLTSALRGT+L+K L+ HPVWD E WK
Sbjct: 154 KGDFEVFCRKIGWTTTDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKSLLKHPVWDNE-DWK 224
BLAST of mRNA_A-nodosum_M_contig11487.1.1 vs. uniprot
Match: A0A7R9YVG1_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YVG1_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.400e-33 Identity = 54/72 (75.00%), Postives = 64/72 (88.89%), Query Frame = 2
Query: 95 RGDFENFCRRIGWTTTNSEVERKLRWFGANEFIYDVDKAPKGHLPLTSALRGTTLLKELMTHPVWDTE*QWK 310
+GDFE FCR+IGWTTT+ EVERK RWFGA+EF YDV KAP+GHLPLTSALRGT+L+KEL+THPVW+ + WK
Sbjct: 158 KGDFEVFCRKIGWTTTDGEVERKKRWFGASEFTYDVKKAPEGHLPLTSALRGTSLIKELLTHPVWEND-DWK 228
BLAST of mRNA_A-nodosum_M_contig11487.1.1 vs. uniprot
Match: A0A7S1XQG5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQG5_9STRA) HSP 1 Score: 122 bits (305), Expect = 1.450e-32 Identity = 49/68 (72.06%), Postives = 62/68 (91.18%), Query Frame = 2
Query: 95 RGDFENFCRRIGWTTTNSEVERKLRWFGANEFIYDVDKAPKGHLPLTSALRGTTLLKELMTHPVWDTE 298
+G F+NFCR+IGW T + E+ERKL+WFGANEFIYD++KAPKGHLPLT+ALRGT LL+ L++HPVW+TE
Sbjct: 142 KGSFDNFCRKIGWNTKDGEIERKLKWFGANEFIYDLEKAPKGHLPLTAALRGTPLLERLISHPVWETE 209
BLAST of mRNA_A-nodosum_M_contig11487.1.1 vs. uniprot
Match: A0A6S8ZHG1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZHG1_9STRA) HSP 1 Score: 120 bits (302), Expect = 6.610e-32 Identity = 51/68 (75.00%), Postives = 60/68 (88.24%), Query Frame = 2
Query: 95 RGDFENFCRRIGWTTTNSEVERKLRWFGANEFIYDVDKAPKGHLPLTSALRGTTLLKELMTHPVWDTE 298
+ DFE FCR+IGWTT + EVERK RWFGA+EFIYDV KAP+GHLPLTSALRGT+L+KEL+ HPVWD +
Sbjct: 160 KNDFEAFCRKIGWTTKDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKELLNHPVWDND 227
BLAST of mRNA_A-nodosum_M_contig11487.1.1 vs. uniprot
Match: A0A7S2P4E3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P4E3_9STRA) HSP 1 Score: 120 bits (301), Expect = 7.100e-32 Identity = 52/72 (72.22%), Postives = 61/72 (84.72%), Query Frame = 2
Query: 95 RGDFENFCRRIGWTTTNSEVERKLRWFGANEFIYDVDKAPKGHLPLTSALRGTTLLKELMTHPVWDTE*QWK 310
+GDFE FCR+IGWTT + EVERK RWFGA+EFIYDV KAP+GHLPLTSALRGT L+K L+ HPVW+ + WK
Sbjct: 151 KGDFEAFCRKIGWTTQDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTPLIKNLLNHPVWEND-DWK 221
BLAST of mRNA_A-nodosum_M_contig11487.1.1 vs. uniprot
Match: A0A7S2UF66_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UF66_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.230e-31 Identity = 51/72 (70.83%), Postives = 62/72 (86.11%), Query Frame = 2
Query: 95 RGDFENFCRRIGWTTTNSEVERKLRWFGANEFIYDVDKAPKGHLPLTSALRGTTLLKELMTHPVWDTE*QWK 310
+GDFE FC +IGWTT + +VERK RWFGA+EFIYDV KAP+GHLPLTSALRGT+LLK+++ HPVWD + WK
Sbjct: 159 KGDFEAFCSKIGWTTKDGDVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLLKQMLNHPVWDND-DWK 229
BLAST of mRNA_A-nodosum_M_contig11487.1.1 vs. uniprot
Match: A0A7S2R3S6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R3S6_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.490e-31 Identity = 51/72 (70.83%), Postives = 63/72 (87.50%), Query Frame = 2
Query: 95 RGDFENFCRRIGWTTTNSEVERKLRWFGANEFIYDVDKAPKGHLPLTSALRGTTLLKELMTHPVWDTE*QWK 310
+ DFE FCR+IGWTT + +VERK RWFGA+EFIYDV KAP+GHLPLTSALRGT+L+K+L+THPVW+ + WK
Sbjct: 167 KNDFEVFCRKIGWTTKDGDVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKQLLTHPVWEND-DWK 237 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11487.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig11487.1.1 >prot_A-nodosum_M_contig11487.1.1 ID=prot_A-nodosum_M_contig11487.1.1|Name=mRNA_A-nodosum_M_contig11487.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=107bp ARIWQLWKTCGSSTAMANSGTASRETFGVKTKGRLRKLLPSDRLDHHQLGback to top mRNA from alignment at A-nodosum_M_contig11487:4435..5277+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig11487.1.1 ID=mRNA_A-nodosum_M_contig11487.1.1|Name=mRNA_A-nodosum_M_contig11487.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=843bp|location=Sequence derived from alignment at A-nodosum_M_contig11487:4435..5277+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig11487:4435..5277+ >mRNA_A-nodosum_M_contig11487.1.1 ID=mRNA_A-nodosum_M_contig11487.1.1|Name=mRNA_A-nodosum_M_contig11487.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=321bp|location=Sequence derived from alignment at A-nodosum_M_contig11487:4435..5277+ (Ascophyllum nodosum dioecious)back to top |