mRNA_A-nodosum_M_contig1145.14.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1145.14.1 vs. uniprot
Match: A0A6H5LBJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBJ9_9PHAE) HSP 1 Score: 596 bits (1537), Expect = 4.940e-192 Identity = 406/1077 (37.70%), Postives = 538/1077 (49.95%), Query Frame = 2
Query: 200 MPSLLRQHYLGLHKMRLGNIMCTEMVRTLSQPGLARVAQSIREVGWLDQFAPSIVIPREAVRDGEQLTAESALKATGRVLDGNHRVTVLKREFAEDDAFLMRIYRDFANPALERVIANSFNEATESMVERTLYDKLFFQNELQRAIMRQTNKKKEASPKELREMYQQVGVTPPSPSTLRYWQTGVNNLHQESFQVLKEICEDSSPKVESNAVTLLYLTRKEFAGYSPVKQALCLHLLTRYKSTFKKAPTSKEYESIAKHAGISEMLIKSTRQIVPEERWTPELKREINKLAFETHINCETWVRPHFEARKEEVDEFLKKVSTGGRETDPIRQLKASISSIVAVKPMTRVRRVLEMDATLSAHLTTWDEKYQAVVNHVNLIHIHGGVDGRGGYESENEAEADGEDAEESGDGGILDNLSAAEEENDDVGWNRGLCCPTCKPSRAAEYCCPKCSIRHMSECPNVKHSGDGRNKARRCRECPEPQVRGEEGGG-----SGSSSKGRKR-----------ARTELLRPS---PSSDGEAAVMEMCMGENTALHNGCPLDPTTTVSQRESILLRDAPKLAIVSIGAEPRLLKNEAAANTHMRVIVKELQSQLHPQGTMAFFVPHPWSVHSGRLYEALTATQLGLVVEEEMLVLTYKTRGGGRRAAGTENHLRYTADAIMLAHNGGTELGFTCNKRVTVDDIYGHGSDPSPPALAVMSDLDYPGAGIDIPPRAVNYLVNRYTNPGDTVLSLSAEKHSAVEVALGRGRRVEVFVSNVAAKEGVKERIKESFRQAYKNGMFKVSASLGKKSVVGPSRLPDGVAASDVLGRIQQAFDLTIRPEEGRALEGDGAVHDLARIMAKDLGYDLRPLERESSESAGMALFPIDGKNYDAGENDLPAWGDFVVFNSRSDAFRSLSLDERRKRYVRLLHVANNQQVKGMLSPGKEECKPGAELYLRVAATCPLFYTRWAEQADDAHMELKTDVPQHGSRADLLRPFDNDGSRERERFVTPVTAKVFKNLAARDYKKSPFLVRPGLMVVRSCGFEVRDSSEPDSLPSPSKKRKLPVEARGITKPT-RKMRRGAG 3370
M ++L +HYLG MRL NI CTEMVR LSQ GL + +SI+EVGW++ FAPS+VI R+ + D +LTAE+AL A LDGNHRVT LK+ + E FL+R+Y +F N A ER+IAN+ N+AT+S+V+RTLYDK++FQ+EL+ AI R+ K K V QA L+ K N+LA +V+PH + + +E L+KVST R + + QLK SIS++V P+ R+R V KCSI HM C N + + RRC +CP + G EG G +G KG+++ A +RPS S EA +M+ C ENT LH+ PLDPT S + + R+APKL IVSIGAE RLL+ A NTH+R ++ ++ ++HP GT+A VPHPWS H RL EA+ +GLVVE+ L+L Y R GGR ENHL+ D ++L HN G FTCNKRVTVDD +G GSD SP ++ +M+D++Y GA DI R +++L+NRYT+ GDTV SLSAE+H+ VE AL R RRVEVFV+N +KE V++ + SF +AYK G +K S SL ++ V+ PS LP G+ A+ + + + D T+ +EG A+ A +A +AK+ GY L E S S+ L P +Y +DLPAWG VFNSR +AF SLS+DER + VRLLHVANN Q+K ML PGKE C PGAELYLRVA TCPL+Y RW A +E + VPQ GSRA++L PF E F TP+ +VF+ + D +SP V PG VVRS GFEVR+S DS P+ +KRK P+ A G + RK+R GAG
Sbjct: 9 MSAVLSKHYLGEFMMRLCNITCTEMVRPLSQNGLQHLERSIQEVGWIESFAPSVVIQRDHLGDSRELTAEAALTAPAHTLDGNHRVTTLKKMYGESGVFLVRVYLEF-NQADERLIANALNDATQSVVQRTLYDKVYFQHELEEAIKREMKKDK-------------------------------------------------------------------------VTQADIRRRLSHAKP---------------------------------------------NQLAL--------YVKPHHKQQADEAKRLLEKVSTADRASTYVVQLKESISTVVPSMPLPRIRNV-------------------------------------------------------------------------------------------------KCSITHMGACANATFVTEEIAEERRCIKCPR-SLDGNEGAGEAEDKAGGVGKGKEKXXXXXXXXXXXASRGRVRPSLLGGPSGNEAVLMDKCRDENTTLHDIVPLDPTG--SDVDKLSFRNAPKLVIVSIGAEQRLLRTSEATNTHLRRVIDNVRGRMHPDGTIALVVPHPWSAHFHRLQEAVRDACVGLVVEDHPLMLNYSKRVGGRPPIRAENHLKNHLDMVLLIHNEGAT--FTCNKRVTVDDPFGFGSDASP-SMQLMTDVEYEGAATDIVMRPLHFLINRYTHAGDTVASLSAERHNVVEAALERSRRVEVFVANPNSKEEVRKNLLASFSRAYKAGKWKASTSLAQERVISPSCLPLGLEANVIPHEVHRFVDSTMN-QEGPAMGEAEASLRVATTLAKEFGYSLESPEGWRSGSSEALLLPRRDMDYHVNSHDLPAWGQLEVFNSRPEAFHSLSVDEREDQRVRLLHVANNVQLKRMLVPGKEVCGPGAELYLRVAPTCPLYYMRWTNDVKQATVEFTSKVPQSGSRAEVLGPFSQV---EGHAFATPMIGRVFRARSKTD-PRSPLNVLPGFAVVRSQGFEVRESDS-DSPPAAGRKRKRPLRATGGGRXKGRKLRNGAG 849
BLAST of mRNA_A-nodosum_M_contig1145.14.1 vs. uniprot
Match: A0A6H5KC60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC60_9PHAE) HSP 1 Score: 281 bits (718), Expect = 1.330e-79 Identity = 205/632 (32.44%), Postives = 281/632 (44.46%), Query Frame = 2
Query: 200 MPSLLRQHYLGLHKMRLGNIMCTEMVRTLSQPGLARVAQSIREVGWLDQFAPSIVIPREAVRDGEQLTAESALKATGRVLDGNHRVTVLKREFAEDDAFLMRIYRDFANPALERVIANSFNEATESMVERTLYDKLFFQNELQRAIMRQTNKKKEASPKELREMYQQVGVTPPSPSTLRYWQTGVNNLHQESFQVLKEICEDSSPKVESNAVTLLYLTRKEFAGYSPVKQALCLHLLTRYKSTFKKAPTSKEYESIAKHAGISEMLIKSTRQIVPEERWTPELKREINKLAFETHINCETWVRPHFEARKEEVDEFLKKVSTGGRETDPIRQLKASISSIVAVKPMTRVRRVLEMDATLSAHLTTWDEKYQAVVNHVNLIHIHGGVDGRGGYESENEAEADGEDAEESGDGGILDNLSAAEEENDDVGWNRGLCCPTCKPSRAAEYCCPKCSIRHMSECPNVKHSGDGRNKARRCRECPEPQVRGEEGGGSGSSS-----KGRK---------------RARTELLRPS---PSSDGEAAVMEMCMGENTALHNGCPLDPTTTVSQRESILLRDAPKLAIVSIGAEPRLLKNEAAANTHMRVIVKELQSQLHPQGTMAFFVPHPWSVHSGRL 2026
M ++L +HYLG KMRL NI CTEMVR LSQ GL + +SI+EVGW++ FAPS+VI R+ + D +LTAE+AL A LDGNHRVT LK+ + E FL+R+Y +F N A ER+IAN+ N+ATES+V+ TLYDK++FQ+EL+ AI R+ K K V QA + +K KK P +K+Y I K+AGI+ +++ ++VP + WTPEL+R L+ E +V+PH + + +E L++VST + + + QLK SIS++V P+ R+R V Y C +CSI HM C N + K RRC +CP + G EG G KG+ A +RPS S EA +M+ C EN LH+ PLDPT S + + R+APKL IVSIGAE RLLK A NTH+R ++ ++ ++HP GT+A VPHPWS H RL
Sbjct: 9 MSAVLSKHYLGEFKMRLCNITCTEMVRPLSQNGLQHLERSIQEVGWIESFAPSVVIQRDHLGDSRELTAEAALTAPAHTLDGNHRVTTLKKMYGESGVFLVRVYLEF-NQADERLIANALNDATESVVQPTLYDKVYFQHELEEAIKREMKKDK-------------------------------------------------------------------------VTQA---DIRRMFKFMNKKLPGAKDYADIDKNAGIAASFVENVLKLVPRDDWTPELRR----LSHEKPNQLALYVKPHHKQQVDEAKRLLEEVSTADKASSHVVQLKESISTVVPSMPLPRIRNV-----------------------------------------------------------------------------------------SVTSYICTECSITHMGACANATFVTEEIAKERRCIKCPR-SLDGNEGAGEAEDKARDVGKGKXXXXXXXXXXXXXXXXEASRGRVRPSLLGGPSGNEAVLMDKCRDENATLHDTVPLDPTG--SDVDKLSFRNAPKLVIVSIGAEQRLLKTSEATNTHLRRVIDNVRGRMHPDGTIALVVPHPWSAHFHRL 467
BLAST of mRNA_A-nodosum_M_contig1145.14.1 vs. uniprot
Match: A0A6H5KKL1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL1_9PHAE) HSP 1 Score: 237 bits (605), Expect = 2.000e-61 Identity = 239/853 (28.02%), Postives = 383/853 (44.90%), Query Frame = 2
Query: 332 GWLDQFAPSIVIPREAVRDGEQLTAESALKATGRVLDGNHRVTVLKREFAEDDAFLMRIYRDFANPALERVIANSFNEATESMVERTLYDKLFFQNELQRAIMRQTNKKKEASPKELREMYQQVGVTPPSPSTLRYWQTGVNNLHQESFQVLKEICEDS--SPKVESNAVTLLYLTRKEFAGY---SPVKQALCLHLLTRYKSTF--KKAPTSKEYESIAKHAGISEMLIKSTRQIVPEE-RWTPELKREINKLAFETHINCETWVRPHFEARKEEVDEFLKKVSTGGRETDPIRQLKASISSIVAVKPMTRVRRVLEMDAT--LSAHLTTWDEKYQAVVNHVNLIHIHGGVDGRGGYESENEAEAD-GEDAEESGDGGILDNLSAAEEEND----DVGWNRGLCCPTCKPSRAAEYCCPKCSIRHMSECPNVKHSGDGRNKARRCRECPEPQVRGEEGGGSGSSSKGRKRARTE-------LLRPSPSSDGEAAVMEMCMGENTALH---NGCPLDPTTTVSQRESILLRDAPKLAIVSIGAEPRLLKNEAAANTHMRVIVKELQ-SQLHPQGTMAFFVPHPWSVHSGRLYEALTATQLGLVVEEEMLVLTYKTRGGGRRAAGTENHLRYTADAIMLAH-------NGGTELGFTCNKRVTVDDIYGHG--SDPSPPALAVMSDLDYPGAGIDIPPRAVNYLVNRYTNPGDTVLSLSAEKHSAVEVALGRGRRVEVFVSNVAAKEGVKERIKESFRQAYKNGMFKVSASLGKKSVVGPSRLPDGVAASDVLGRIQQAFDLTI--RPEEGRALEGDGAVHDLARIMAKDLG-------YDLRPLERESSESAG 2758
G+L Q A ++ V G L+A +A K R+LDG HR + + + RIY DF P E V+A+ N +++V R ++D +FF N+L R+ S K +++ Y + GV+PP +T+R + V L +FQ L+ I E S P + ++T L F S QAL L + R++S KA T + IAK A + ++ T W+PEL + K A+ ET VRP + R ++ +E K+ R +D I A P+ R+ + + T + H T+ +++Q VV N+ + S+ E D G +A E+G EE +D DVG + VK +G+E G+ K R+ +R + LL P+P D +E CM + +H N LD ++ +I L KL ++++GA + A + + ++ ++ + + P+GTMAF VPHPW + L +ALTAT + +V+EE ML L Y + G GR A+ HL+++ DA+ML H N T+ GFT N++VT D++YG+ + SP ++++D+ +PG G+D P +A +LV RY+ DTVL AE ++ VE A+ GR+VE FV++ + V+ R + +F+ AY G+FK +A++ + + RLP + + IQ A + +PE L +A+ A +G YD L S+ES G
Sbjct: 9 GFLQQHAILAMVEASNVPAGG-LSAAAATKLQLRILDGAHRTHCALQLYGREFVIPCRIYTDF-KPLEEAVVASGLNNVAQALVPRGVFDDVFFMNQLLDGF-RKMKGSVVPSVKMIQDAYLKGGVSPPGQTTIRRHKAAVYFLTTVAFQALQWIQERSHEDPSIHMASLTWTTLGHSAFGEVGRTSGAMQALMLEHMVRFRSRSDNSKALTVADLPDIAKLAHDAHDFMERTEAAFGARGEWSPELAVLVEKYAYVQSGALETIVRPWMQKRDDKANELSNKLPGDRRLSDD------HFHVISAASPLGRIHKAVTRRKTDPSATHYETFQKQFQEVVLAYNISELVADTSS-----SQGSTEGDTGVEATEAGVXXXXXXXXEGEESSDGEYGDVGGXXXXXXXXXXXXXXXXXXXGGTANETTPPTGKVKXXXXXXXXXXXX---XXXTAKGQENDNGGTVVKARQASRRKSTGHGGLLLTPAPVED-----VEECMAQKFVVHEEYNLLELDR----DEQAAIDLHSQAKLVLLNVGA----FQGCKADDDRLADLIYNVRHNMMCPRGTMAFLVPHPWFENGHHLQDALTATGMRMVIEENMLTLVYSSTGAGRPASAANVHLKFSQDAVMLVHLTSSSSSNSPTD-GFTVNEKVTTDELYGNSKAASVSPQCSSILTDIQHPGKGVDWPTKASMFLVKRYSRQCDTVLLFGAEHNTGVETAISSGRKVEAFVASPESAAKVEARTEIAFKTAYAQGVFKSTAAVTSQVTISTERLPCAIPGHNSPPAIQTACAEAVVEKPE----LSNKDRCLGVAQATAAKMGWAIEKDDYDEWVLSISSTESYG 826
BLAST of mRNA_A-nodosum_M_contig1145.14.1 vs. uniprot
Match: A0A6H5JDB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDB1_9PHAE) HSP 1 Score: 238 bits (608), Expect = 1.880e-60 Identity = 175/560 (31.25%), Postives = 265/560 (47.32%), Query Frame = 2
Query: 1502 CPTCKPSRAAEYC-CPKCSIRHMSECPNVKHSGDGRNKARRCRECPEPQVRGEEGGGSGSSSKGRKRARTELLRPSPSSDGEAAVMEMCMGENTALH-NGCPLDPTTTVSQRESILLRDAPKLAIVSIGAEPRLLKNEAAANTHMRVIVKELQSQLHPQGTMAFFVPHPWSVHSGRLYEALTATQLGLVVEEEMLVLTYKTRGGGRRAAGTENHLRYTADAIMLAHN-----GGTELGFTCNKRVTVDDIYGHGSDPSPPALAVMSDLDYP------GAGIDIPPRAVNYLVNRYTNPGDTVLSLSAEKHSAVEVALGRGRRVEVFVSNVAAKEGVKERIKESFRQAYKNGMFKVSASLGKKSVVGPSRLPDGVAASDVLGRIQQAFDLTIRPEEGRALEGDGAVHDLARIMAKDLGYDLR------PLERESSESAGMALFPIDGKNYDAGENDLPAWGDFVVFNSRSDAFRSLSLDERRKRYVRLLHVANNQQVKGMLSPGKEECKPGAELYLRVAATCPLFYTRWAEQADDAHMELKTDVPQHGSRADLLRPFDNDG 3124
C C PS ++ C KC I H+ C + GDG A C++C E G+ G ++ KR R P D V + M +T +H T T + + + PKLAIV + + L K+ A+ ++ V L L +GT A +P PW L A L ++ +V++Y++ GG + E R + +++ H GGT + FTCN+RV V D++GH P A V+ + P G+ PP A Y + R+TN GDTVL + E + E A+ RGRRVE +V++ + + ++ +I +F +A+ +GMF+ S GK+ VVGP+ LP G+ S V E A + +A+ +AK L+ L + A A + +D+P WG+ +V+ S A SL+ +E + YVRLL +A N Q++ ML PG E C P A LYLRVAATCP+F+ RW E A +++ D+PQ G RA++L F + G
Sbjct: 587 CDVCNPSPPSDGSKCAKCGILHLESCNFIVKEGDG---ALVCKDCTEDIDSGDVG------ARATKRRRKGDKVTLPEGDSTVEV-DTSMSRSTVVHAEELFASRTNTCTGGSPLKTHNRPKLAIVDLTRQDFLFKDTPASKNVLKNAVDGLTEVLDEKGTNACAIPRPWYFKGNLLVGAFKEFPDKLFIDPTPVVISYQSVSGGAQHKSHELLHRNQQEHVLMVHRAPPAAGGT-VNFTCNRRVVVSDVFGHSLGNIPQARHVIQLENLPAGAPNGGSRTFFPPTASQYFIARFTNAGDTVLGVGVESTTVAEDAISRGRRVEFYVTDESKRASLQAKISSTFHKAHSSGMFQ-SRRGGKEVVVGPNCLPAGLPPSTVXXXXXXXXXXXXEKEPDVLT----ASYTVAQTIAKTTHLTLQGDHHSPKLVMKKPRRASKAPKEV---------SDIPVWGELIVYPSPQAAKDSLTQEEVDEEYVRLLRIATNAQLQLMLEPGTERCTPEAALYLRVAATCPVFWVRW-ESKTKADLDISCDIPQRGLRANILASFSSSG 1120
BLAST of mRNA_A-nodosum_M_contig1145.14.1 vs. uniprot
Match: A0A6H5JEK0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEK0_9PHAE) HSP 1 Score: 218 bits (554), Expect = 6.330e-56 Identity = 203/684 (29.68%), Postives = 327/684 (47.81%), Query Frame = 2
Query: 560 NEATESMVERTLYDKLFFQNELQRAIMRQTNKKKEASPKELREMYQQVGVTPPSPSTLRYWQTGVNNLHQESFQVLKEICEDS--SPKVESNAVTLLYLTRKEF--AGY-SPVKQALCLHLLTRYKSTF--KKAPTSKEYESIAKHAGISEMLIKSTRQIV-PEERWTPELKREINKLAFETHINCETWVRPHFEARKEEVDEFLKKVSTGGRETDPIRQLKASISSIVAVKPMTRVRRVLEMDAT--LSAHLTTWDEKYQAVVNHVNLIHIHGGVDG-RGGYESENEAEADGEDAEESGDGGILDNLSAAEEENDDVGWNRGLCCPTCKPSRAAEYCCPKCSIRHMSECPNVKHSGDGRNKARRCRECPEPQVRGEEGGGSGSSSKGRKRARTE-------LLRPSPSSDGEAAVMEMCMGENTALHNGCPLDPTTTVSQRESILLRDAPKLAIVSIGAEPRLLKNEAAANTHMRVIVKELQ-SQLHPQGTMAFFVPHPWSVHSGRLYEALTATQLGLVVEEEMLVLTYKTRGGGRRAAGTENHLRYTADAIMLAH-------NGGTELGFTCNKRVTVDDIYGHGSDPSPPAL--AVMSDLDYPGAGIDIPPRAVNYLVNRYTNPGDTVLSLSAEKHSAVEVALGRGRRVEVFVSNVAAKEGVKERIKESFRQAYKNGMFKV 2527
N +++V R ++D +FF N+L R+ S K +++ Y + G++PP ST+RY + VN L E FQ L+ I E S P + ++T L+ F AG S QAL L + R++S+ KA T + +AK A + ++ T W+PEL + K A+ ET VRP + R +E +E K+ R +D I A KP+ R+ + T + H T+ +++Q V+ N+ + +G E +N EA G SG GG + ++ E+ DVG + + + +G+ + K R E G+ K R+ +R + LL P+ D +E CM +N +H L ++ +I LR KL ++++GA + A + + ++ ++ S + P+GTMAF VPHPW + L ALTA + +V+EE ML L Y + GR A+ HL+++ DA+ML H N T+ GFT N++VT DD+YG+ + S + ++++D+ +PG G+D P +A+ +LVNRY+ GDTVL AE ++ VE A+ RGR+VE FV++ A V+ R + +F+ AY G+FKV
Sbjct: 8 NNVAQALVPRGVFDDVFFMNQLLDGF-RKMQGSLFPSAKMIQDAYVKGGLSPPRQSTVRYHKAAVNCLTTEGFQALQRIQERSHEDPSIHMASLTWTTLSHSAFGEAGQTSGAIQALMLEHMVRFRSSSDNSKALTGDDLPDVAKLAHDAHDFMERTEAAFGARSEWSPELAVLVEKYAYVQSGALETIVRPWMKKRDDEANELSSKLPGDRRLSDD------HFHVISAAKPLGRIHKAATKSKTEPSTTHYETFQKRFQEVMLAYNISELVADTSSSQGSTEGDNGVEATGTGVR-SGAGGGEEGEQTSDGEDGDVGGXXXXXXXXXXXDMXXXXXXXEGG--NGEDYDTTPRTGNVKGK-RXXXXXXXXXXXXXEKDNEGTVVKARQASRRKSTGHGGLLLTPATVED-----VEECMAQNFVVHEEYSLLDMDR-DEQAAIDLRRRAKLVLLNVGA----FQGCKADDDRLADLIYNVRHSMICPRGTMAFLVPHPWFENGHHLQAALTAKGMRVVIEEIMLTLVYSSPRAGRPASAANGHLKFSQDAVMLVHLTSFSSSNSPTD-GFTVNEKVTTDDLYGNSTAASVTSQCSSILTDIQHPGKGVDWP-KALMFLVNRYSRQGDTVLLFGAEHNTRVETAITRGRKVEAFVASPEAAVKVEARTEIAFQTAYAQGIFKV 668
BLAST of mRNA_A-nodosum_M_contig1145.14.1 vs. uniprot
Match: A0A6H5KBS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBS8_9PHAE) HSP 1 Score: 192 bits (487), Expect = 1.360e-51 Identity = 110/202 (54.46%), Postives = 132/202 (65.35%), Query Frame = 2
Query: 2786 NYDAGENDLPAWGDFVVFNSRSDAFRSLSLDERRKRYVRLLHVANNQQVKGMLSPGKEECKPGAELYLRVAATCPLFYTRWAEQADDAHMELKTDVPQHGSRADLLRPFDNDGSRERERFVTPVTAKVFKNLAARDYKKSPFLVRPGLMVVRSCGFEVRDSSEPDSLPSPSKKRKLPVEARGITKPT-RKMRRGAGDSASEE 3388
+Y +DLPAWG VFNSR +AFRSLS+DER + VRLLHVANN Q+K ML PGKE C PGAELYLRVA TCPL+Y RW A +E + VPQ GSRA++L PF E + F TPV +VF+ + D +SP V PG VVRS GFEVR+S DS P+ +KRK PV A G + RK R GAG S+S+E
Sbjct: 2 DYHVNSHDLPAWGQLEVFNSRPEAFRSLSVDEREDQRVRLLHVANNVQLKRMLVPGKEVCGPGAELYLRVAPTCPLYYMRWTNDVKQATVEFTSKVPQSGSRAEVLGPFSQV---EGQAFATPVIGRVFRARSKTD-PRSPLNVLPGFAVVRSQGFEVRESDS-DSPPAAGRKRKRPVRATGGGRGKGRKFRNGAGGSSSDE 198
BLAST of mRNA_A-nodosum_M_contig1145.14.1 vs. uniprot
Match: A0A6H5KE40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE40_9PHAE) HSP 1 Score: 187 bits (476), Expect = 5.180e-48 Identity = 120/367 (32.70%), Postives = 190/367 (51.77%), Query Frame = 2
Query: 2057 LVVEEEMLVLTYKTRGGGRRAAGTENHLRYTADAIMLAHN-----GGTELGFTCNKRVTVDDIYGHGSDPSPPALAVMSDLDYP------GAGIDIPPRAVNYLVNRYTNPGDTVLSLSAEKHSAVEVALGRGRRVEVFVSNVAAKEGVKERIKESFRQAYKNGMFKVSASLGKKSVVGPSRLPDGVAASDVLGRIQQAFDLTIRPEEGRALEGDGAVHDLARIMAKDLGYDLRPLERESSESAGMALFPIDGKNYDAGENDLPAWGDFVVFNSRSDAFRSLSLDERRKRYVRLLHVANNQQVKGMLSPGKEECKPGAELYLRVAATCPLFYTRWAEQADDAHMELKTDVPQHGSRADLLRPFDNDG 3124
L ++ +V++Y++ GG + E R + +++ H GGT + FTCN+RV V D++GH P A V+ + P G+ PP Y + R+TN GDTVL + E + E A+ RGRRVE +V++ + + ++ +I +F +A+ +GMF+ S GK+ VVGP+ P G+ S V R+ +A + E H +++ K +P R +S+ +D+P WG+ +V+ S A SL+ +E + YVRLL +A N Q++ ML PG E C P A LYLRVAATCP+F+ R +E A +++ D+PQ G RA++L + G
Sbjct: 12 LFIDPTPVVISYQSVSGGAQHKSHELLHRNQQEHVLMVHRAPPAAGGT-VNFTCNRRVVVSDVFGHSRGNIPHARHVIQLENLPAGAPNGGSRTVFPPTDSQYFIARFTNAGDTVLGVGVESTTVAEDAISRGRRVEFYVTDESKRASLQAKISSTFHKAHSSGMFQ-SRRGGKEVVVGPNCSPAGLPPSTVPERVSEALKAALEKEPDVLTASYTGDHHSPKLVTK------KP--RRASKVPKEV-------------SDIPVWGELIVYPSPQAAKDSLTQEEVDEEYVRLLQIATNAQLQLMLKPGTERCTPEAALYLRVAATCPVFWVR-SESKTKADLDISCDIPQRGLRANILETLSSSG 354
BLAST of mRNA_A-nodosum_M_contig1145.14.1 vs. uniprot
Match: A0A6H5KEK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK0_9PHAE) HSP 1 Score: 171 bits (434), Expect = 1.310e-44 Identity = 100/202 (49.50%), Postives = 126/202 (62.38%), Query Frame = 2
Query: 2786 NYDAGENDLPAWGDFVVFNSRSDAFRSLSLDERRKRYVRLLHVANNQQVKGMLSPGKEECKPGAELYLRVAATCPLFYTRWAEQADDAHMELKTDVPQHGSRADLLRPFDNDGSRERERFVTPVTAKVFKNLAARDYKKSPFLVRPGLMVVRSCGFEVRDSSEPDSLPSPSKKRKLPVEAR-GITKPTRKMRRGAGDSASEE 3388
+Y +DL AWG VFNSR +AF SLS+D+R+ + VRLLHVANN Q+K ML PGKE C PGAELYLRVA TCPL+YTRW A +E + VPQ GSRA+ + E + F TP+ +V + + D +SP V PG VVRS GF+VR+S D P+ +KRK P+ A G RK+R GAG S+S E
Sbjct: 2 DYHVNSHDLTAWGQLEVFNSRPEAFHSLSVDKRQDQRVRLLHVANNVQLKRMLVPGKEVCGPGAELYLRVAPTCPLYYTRWTNDVKQATVEFTSKVPQSGSRAEFSQV-------EEKAFATPMIGRVVRARSKSD-PRSPLNVLPGFAVVRSQGFQVRESDS-DYSPAAGRKRKRPLRATDGGRGKGRKLRNGAGGSSSNE 194
BLAST of mRNA_A-nodosum_M_contig1145.14.1 vs. uniprot
Match: A0A6H5KEI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEI5_9PHAE) HSP 1 Score: 174 bits (442), Expect = 3.470e-42 Identity = 115/340 (33.82%), Postives = 179/340 (52.65%), Query Frame = 2
Query: 2141 RYTADAIMLAHNGGTELGFTCNKRVTVDDIYGHGSDPSPPALAVMSDLDYP------GAGIDIPPRAVNYLVNRYTNPGDTVLSLSAEKHSAVEVALGRGRRVEVFVSNVAAKEGVKERIKESFRQAYKNGMFKVSASLGKKSVVGPSRLPDGVAASDVLGRIQQAFDLTIRPEEGRALEGDGAVHDLARIMAKDLGYDLR------PLERESSESAGMALFPIDGKNYDAGENDLPAWGDFVVFNSRSDAFRSLSLDERRKRYVRLLHVANNQQVKGMLSPGKEECKPGAELYLRVAATCPLFYTRWAEQADDAHMELKTDVPQHGSRADLLRPFDNDG 3124
R A+ + L G + + + RV V D++GH P A V+ + P G+ PP A Y + R+TN GDTVL + E + E A+ RGRRVE +V++ + + ++ +I SF +A+ +GMF+ S GK+ VVGP+ LP G+ S+V R+ A T++ + + A + +A+ +AK L+ L + A A + +D+P WG+ +V+ S A SL+ +E + YVRLL +A N Q++ ML PG E C P A LYLRVAATCP+F+ R +E A +++ D+PQ G RA++L + G
Sbjct: 187 RRKAEKVTLPE-GESTVEVDTSIRVVVSDVFGHSLGYIPHARHVIQLENLPAGAPNGGSRTFFPPTASQYFIARFTNAGDTVLGVGVESTTVAEDAISRGRRVEFYVTDESKRASLQAKISSSFHKAHSSGMFQ-SRRGGKEVVVGPNCLPAGLPPSNVPERVSVAAHSTLKAALEKEPDVLTASYTVAQTIAKTTHLTLQGDHHSPKLVMKKPRRASKAPKEV---------SDIPVWGELIVYPSPQAAKDSLTQEEVDEEYVRLLRIATNAQLQLMLEPGTERCTPEAALYLRVAATCPVFWVR-SESKTKADLDISCDIPQRGLRANILETVSSSG 514
BLAST of mRNA_A-nodosum_M_contig1145.14.1 vs. uniprot
Match: A0A6H5JUE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUE7_9PHAE) HSP 1 Score: 149 bits (376), Expect = 3.650e-38 Identity = 75/130 (57.69%), Postives = 89/130 (68.46%), Query Frame = 2
Query: 2786 NYDAGENDLPAWGDFVVFNSRSDAFRSLSLDERRKRYVRLLHVANNQQVKGMLSPGKEECKPGAELYLRVAATCPLFYTRWAEQADDAHMELKTDVPQHGSRADLLRPFDNDGSRERERFVTPVTAKVFK 3175
+Y +DLPAWG VFNSR +AFRSLSLDER + VRLLHVANN Q+K ML PGKE C PGAELYLRVA TCPL+Y RW A +E + VPQ GSRA++L PF E + F TP+ +VF+
Sbjct: 2 DYHVNSHDLPAWGQLEVFNSRPEAFRSLSLDEREDQRVRLLHVANNVQLKRMLVPGKEGCGPGAELYLRVAPTCPLYYMRWTNDVKQATVEFTSKVPQSGSRAEVLGPFSRV---EGQAFATPMIGRVFR 128 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1145.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1145.14.1 >prot_A-nodosum_M_contig1145.14.1 ID=prot_A-nodosum_M_contig1145.14.1|Name=mRNA_A-nodosum_M_contig1145.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1137bp MMPLTDTDAHGSKALGSSNAKGSMPSLLRQHYLGLHKMRLGNIMCTEMVRback to top mRNA from alignment at A-nodosum_M_contig1145:86030..99717+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1145.14.1 ID=mRNA_A-nodosum_M_contig1145.14.1|Name=mRNA_A-nodosum_M_contig1145.14.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=13688bp|location=Sequence derived from alignment at A-nodosum_M_contig1145:86030..99717+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1145:86030..99717+ >mRNA_A-nodosum_M_contig1145.14.1 ID=mRNA_A-nodosum_M_contig1145.14.1|Name=mRNA_A-nodosum_M_contig1145.14.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=3411bp|location=Sequence derived from alignment at A-nodosum_M_contig1145:86030..99717+ (Ascophyllum nodosum dioecious)back to top |