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Homology
BLAST of mRNA_A-nodosum_M_contig1144.9.1 vs. uniprot
Match: A0A6H5KA78_9PHAE (TRASH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA78_9PHAE) HSP 1 Score: 294 bits (752), Expect = 1.360e-99 Identity = 155/174 (89.08%), Postives = 163/174 (93.68%), Query Frame = 2
Query: 50 MVRIEVCYFCSSKIYPGHGIVFVRNDSKVFRFCRSKCHKNFTRKRNPRKSKWTKAFRRAAGKEMAVDTTFDFEKRRNRPVKYDRETMGKTLLAMKKVKEVQAKREQRFFENRHRGAKTKEKAKIKADIKENIELLAPAATQDREKTLTTITDKAKQQKASAAASKARVTMETED 571
MVRIE+CYFCSS+IYPGHGIVF RNDSKVFRFCRSKCHKNFTRKRNPRKSKWTKAFRRAAGKEM+VDTTFDFEKRRNRPVKYDRE MGKTLLAMKKVKEVQAKRE+RFFENRH+GA KEKA IKA+IK+NIELLAPAA DREKTLT I+DKAKQ KASAAASKAR METED
Sbjct: 1 MVRIEICYFCSSRIYPGHGIVFARNDSKVFRFCRSKCHKNFTRKRNPRKSKWTKAFRRAAGKEMSVDTTFDFEKRRNRPVKYDREAMGKTLLAMKKVKEVQAKREKRFFENRHKGALAKEKAAIKAEIKDNIELLAPAAAVDREKTLTAISDKAKQ-KASAAASKARTLMETED 173
BLAST of mRNA_A-nodosum_M_contig1144.9.1 vs. uniprot
Match: A0A835Z8F8_9STRA (RL30, ribosomal protein 30 60S large ribosomal subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8F8_9STRA) HSP 1 Score: 226 bits (576), Expect = 1.100e-72 Identity = 113/167 (67.66%), Postives = 140/167 (83.83%), Query Frame = 2
Query: 50 MVRIEVCYFCSSKIYPGHGIVFVRNDSKVFRFCRSKCHKNFTRKRNPRKSKWTKAFRRAAGKEMAVDTTFDFEKRRNRPVKYDRETMGKTLLAMKKVKEVQAKREQRFFENRHRGAKTKEKAKIKADIKENIELLAPAATQDREKTLTTITDKAKQQKASAAASKAR 550
MVR+EVCYFCS +YPGHG+ FVRND+KVF+FCRSKCHKNF +KRNPRK KWTKA+R+AAGKEM VDTTFDFEKRRNRPVKYDRE MGKTLLAMKKV EVQA+RE+RFF+ RH+ +EKA I+ ++++NIELL PAA DREK L + + +Q+++ A ++A+
Sbjct: 1 MVRVEVCYFCSGPMYPGHGVQFVRNDAKVFKFCRSKCHKNFIKKRNPRKMKWTKAYRKAAGKEMTVDTTFDFEKRRNRPVKYDRELMGKTLLAMKKVTEVQAQREKRFFDVRHKDKAAREKAAIRTEVEQNIELLVPAAA-DREKALANVKEVIRQKESKNALTRAK 166
BLAST of mRNA_A-nodosum_M_contig1144.9.1 vs. uniprot
Match: D7FZ76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ76_ECTSI) HSP 1 Score: 201 bits (510), Expect = 2.640e-63 Identity = 118/174 (67.82%), Postives = 125/174 (71.84%), Query Frame = 2
Query: 50 MVRIEVCYFCSSKIYPGHGIVFVRNDSKVFRFCRSKCHKNFTRKRNPRKSKWTKAFRRAAGKEMAVDTTFDFEKRRNRPVKYDRETMGKTLLAMKKVKEVQAKREQRFFENRHRGAKTKEKAKIKADIKENIELLAPAATQDREKTLTTITDKAKQQKASAAASKARVTMETED 571
MVRIE+CYFCSS+IYPGHGIVF RNDSK DTTFDFEKRRNRPVKYDRE MGKTLLAMKKVKEVQAKRE+RFFENRH+GA KEKA IKA+IK+NIELLAPAA DREKTLT I+DKAKQ KASAAASKAR METED
Sbjct: 1 MVRIEICYFCSSRIYPGHGIVFARNDSK--------------------------------------DTTFDFEKRRNRPVKYDREAMGKTLLAMKKVKEVQAKREKRFFENRHKGALAKEKAAIKAEIKDNIELLAPAAAVDREKTLTAISDKAKQ-KASAAASKARALMETED 135
BLAST of mRNA_A-nodosum_M_contig1144.9.1 vs. uniprot
Match: A0A4D9CSX3_9STRA (TRASH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSX3_9STRA) HSP 1 Score: 202 bits (514), Expect = 3.530e-63 Identity = 98/154 (63.64%), Postives = 126/154 (81.82%), Query Frame = 2
Query: 53 VRIEVCYFCSSKIYPGHGIVFVRNDSKVFRFCRSKCHKNFTRKRNPRKSKWTKAFRRAAGKEMAVDTTFDFEKRRNRPVKYDRETMGKTLLAMKKVKEVQAKREQRFFENRHRGAKTKEKAKIKADIKENIELLAPAATQDREKTLTTITDKAK 514
+RI CYFCS +YPGHG FVRND+KVF FCRSKCH+NF +KRNPRK++WTKA+R+AAGKEM VD TFDFEKRRNRPVKYDR+ +GKT+ AM+K++ +Q++RE+ F++ R R AK KEKA ++ ++KEN+ELLAPAA REK L + +K K
Sbjct: 1 MRILKCYFCSGPMYPGHGTTFVRNDAKVFNFCRSKCHRNFNKKRNPRKARWTKAYRKAAGKEMVVDATFDFEKRRNRPVKYDRDLVGKTVQAMQKIRTIQSRREEVFYQTRMREAKMKEKAALQVEVKENVELLAPAAA-SREKVLLNVREKVK 153
BLAST of mRNA_A-nodosum_M_contig1144.9.1 vs. uniprot
Match: A0A448YUA5_9STRA (TRASH domain-containing protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448YUA5_9STRA) HSP 1 Score: 201 bits (511), Expect = 6.830e-63 Identity = 99/155 (63.87%), Postives = 127/155 (81.94%), Query Frame = 2
Query: 53 VRIEVCYFCSSKIYPGHGIVFVRNDSKVFRFCRSKCHKNFTRKRNPRKSKWTKAFRRAAGKEMAVDTTFDFEKRRNRPVKYDRETMGKTLLAMKKVKEVQAKREQRFFENRHRGAKTKEKAKIKADIKENIELLAPAATQDREKTLTTITDKAKQ 517
+RIE CYFCSS YPGHGI FVRNDSK FRFCRSKCH+NF +KRNPRK WTKA+R+ GKEMAVD+TFDFEKRRNRPVKYDR+ MGKT+LAM++V+ ++ REQRFF+NR + +K ++K + + +I+++IELLAPA +RE+ + + D AKQ
Sbjct: 1 MRIEKCYFCSSPCYPGHGITFVRNDSKQFRFCRSKCHRNFNKKRNPRKVAWTKAYRKTRGKEMAVDSTFDFEKRRNRPVKYDRDLMGKTILAMRRVESIKKAREQRFFDNRVKDSKAEKKQQARVEIEKSIELLAPAVA-NREQVMRNVIDSAKQ 154
BLAST of mRNA_A-nodosum_M_contig1144.9.1 vs. uniprot
Match: A0A6U3SB39_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SB39_9STRA) HSP 1 Score: 201 bits (510), Expect = 1.220e-62 Identity = 99/159 (62.26%), Postives = 131/159 (82.39%), Query Frame = 2
Query: 53 VRIEVCYFCSSKIYPGHGIVFVRNDSKVFRFCRSKCHKNFTRKRNPRKSKWTKAFRRAAGKEMAVDTTFDFEKRRNRPVKYDRETMGKTLLAMKKVKEVQAKREQRFFENRHRGAKTKEKAKIKADIKENIELLAPAATQDREKTLTTITDKAKQQKAS 529
+RIE CYFCSS YPGHG+VFVRNDSK FRFCRSKCH+NF +KRNPRK WTKA+R+ GKE+A+D+TF+FEKRRNRPVKYDR MGKT+LAM++V+ ++ KRE+RFF NR + AK ++KA+ + +I++ IELLAPA +RE+ + + DKA+++ AS
Sbjct: 1 MRIEKCYFCSSPCYPGHGMVFVRNDSKQFRFCRSKCHRNFNKKRNPRKVAWTKAYRKTRGKELAIDSTFEFEKRRNRPVKYDRNLMGKTILAMQRVQAIKEKREERFFANRMKDAKKEQKAQARVEIEKGIELLAPAVA-NREEVMRNVVDKARERIAS 158
BLAST of mRNA_A-nodosum_M_contig1144.9.1 vs. uniprot
Match: W7T7Z2_9STRA (Ribosome biogenesis protein rlp24 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T7Z2_9STRA) HSP 1 Score: 202 bits (515), Expect = 2.700e-62 Identity = 98/155 (63.23%), Postives = 127/155 (81.94%), Query Frame = 2
Query: 53 VRIEVCYFCSSKIYPGHGIVFVRNDSKVFRFCRSKCHKNFTRKRNPRKSKWTKAFRRAAGKEMAVDTTFDFEKRRNRPVKYDRETMGKTLLAMKKVKEVQAKREQRFFENRHRGAKTKEKAKIKADIKENIELLAPAATQDREKTLTTITDKAKQ 517
+RI CYFCS +YPGHG FVRND+KVF FCRSKCH+NF +KRNPRK++WTKA+R+AAGKEM VD TFDFEKRRNRPVKYDR+ +GKT+ AM+K++ +Q++RE+ F++ R R AK KEKA ++ ++KEN+ELLAPAA REK L + +K K+
Sbjct: 77 MRILKCYFCSGPMYPGHGTTFVRNDAKVFNFCRSKCHRNFNKKRNPRKTRWTKAYRKAAGKEMVVDATFDFEKRRNRPVKYDRDLVGKTVQAMQKIRTIQSRREEVFYQTRMREAKMKEKAALQVEVKENVELLAPAAA-SREKALLNVREKVKE 230
BLAST of mRNA_A-nodosum_M_contig1144.9.1 vs. uniprot
Match: A0A1E7FH63_9STRA (60S ribosomal protein L24 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FH63_9STRA) HSP 1 Score: 199 bits (507), Expect = 3.700e-62 Identity = 99/154 (64.29%), Postives = 125/154 (81.17%), Query Frame = 2
Query: 53 VRIEVCYFCSSKIYPGHGIVFVRNDSKVFRFCRSKCHKNFTRKRNPRKSKWTKAFRRAAGKEMAVDTTFDFEKRRNRPVKYDRETMGKTLLAMKKVKEVQAKREQRFFENRHRGAKTKEKAKIKADIKENIELLAPAATQDREKTLTTITDKAK 514
+RIE CYFCSS YPGHG+ FVRNDSK FRFCRSKCH+NF +KRNPRK WTKA+R+ GKEMAVD+TFDFEKRRNRPVKYDR+ MGKT+LAMK+V+ ++ RE+RFFENR AK ++K + + +I+++IELLAPA +RE+ + + D AK
Sbjct: 1 MRIEKCYFCSSPCYPGHGMTFVRNDSKQFRFCRSKCHRNFNKKRNPRKVAWTKAYRKTRGKEMAVDSTFDFEKRRNRPVKYDRDLMGKTILAMKRVETIKKAREERFFENRMSDAKAEKKKQARVEIEKSIELLAPAVA-NREQVMRNVIDSAK 153
BLAST of mRNA_A-nodosum_M_contig1144.9.1 vs. uniprot
Match: A0A7S2DM88_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DM88_9STRA) HSP 1 Score: 199 bits (506), Expect = 4.190e-62 Identity = 105/167 (62.87%), Postives = 129/167 (77.25%), Query Frame = 2
Query: 50 MVRIEVCYFCSSKIYPGHGIVFVRNDSKVFRFCRSKCHKNFTRKRNPRKSKWTKAFRRAAGKEMAVDTTFDFEKRRNRPVKYDRETMGKTLLAMKKVKEVQAKREQRFFENRHRGAKTKEKAKIKADIKENIELLAPAATQDREKTLTTITD----KAKQQKASAAA 538
MVR+E CYFCS +YPGHGI FVRND+KVF+FCRSKCHKNF RKRNPRK+ WTKAFRRA KEM VD+T DFEKRRNRPVKYDRE +G TL AM++VKE+ +RE+ F+ R + +KT ++ K ++KEN+E+LAPAA Q +EK L I D KA Q+ +AAA
Sbjct: 8 MVRVETCYFCSGPLYPGHGIQFVRNDAKVFKFCRSKCHKNFIRKRNPRKTAWTKAFRRARKKEMTVDSTLDFEKRRNRPVKYDRELVGTTLRAMQRVKEIHTRREEIFYAKRMKESKTIQRQAAKVELKENMEILAPAAAQ-KEKVLLNIADHARVKAAAQRRTAAA 173
BLAST of mRNA_A-nodosum_M_contig1144.9.1 vs. uniprot
Match: A0A7S0PX55_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PX55_9STRA) HSP 1 Score: 195 bits (496), Expect = 1.520e-60 Identity = 93/154 (60.39%), Postives = 125/154 (81.17%), Query Frame = 2
Query: 53 VRIEVCYFCSSKIYPGHGIVFVRNDSKVFRFCRSKCHKNFTRKRNPRKSKWTKAFRRAAGKEMAVDTTFDFEKRRNRPVKYDRETMGKTLLAMKKVKEVQAKREQRFFENRHRGAKTKEKAKIKADIKENIELLAPAATQDREKTLTTITDKAK 514
+R+E CYFCSS YPGHG++FVRNDSK FRFCRSKCH+NF +KRNPRK WTKA+R+ GKEMA+D+TF+FEKRRNRPVKYDR+ MGKT+LAM++V+ ++ RE+RFF NR + AK ++K + + +I+++IELLAPA RE+ + + D A+
Sbjct: 1 MRVEKCYFCSSPCYPGHGMMFVRNDSKTFRFCRSKCHRNFNKKRNPRKVAWTKAYRKTRGKEMAIDSTFEFEKRRNRPVKYDRDLMGKTILAMQRVQNIKENREERFFANRMKDAKAEKKQQARVEIEKSIELLAPAVA-SREQVMKNVVDSAR 153
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7FZ76 |
| Preferred name | RSL24D1 |
| PFAMs | Ribosomal_L24e |
| Model size | 574 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K02896 |
| KEGG Pathway | ko03010,map03010 |
| KEGG Module | M00177,M00179 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000027,GO:0001671,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008047,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030234,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032781,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043462,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0051336,GO:0051345,GO:0060589,GO:0060590,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 |
| Exons | 5 |
| Evalue | 1.66e-64 |
| EggNOG OGs | COG2075@1|root,KOG1723@2759|Eukaryota |
| Ec32 ortholog description | Ribosomal protein L24e-related |
| Ec32 ortholog | Ec-13_002830.1 |
| Description | assembly of large subunit precursor of preribosome |
| Cds size | 525 |
| COG category | J |
| BRITE | br01610,ko00000,ko00001,ko00002,ko03011 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680866549.6423416-UTR-A-nodosum_M_contig1144:104444..104493 | 1680866549.6423416-UTR-A-nodosum_M_contig1144:104444..104493 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1144 104445..104493 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680866549.6530588-CDS-A-nodosum_M_contig1144:104493..104577 | 1680866549.6530588-CDS-A-nodosum_M_contig1144:104493..104577 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1144 104494..104577 + |
| 1680866549.6635542-CDS-A-nodosum_M_contig1144:112808..112922 | 1680866549.6635542-CDS-A-nodosum_M_contig1144:112808..112922 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1144 112809..112922 + |
| 1680866549.6749706-CDS-A-nodosum_M_contig1144:113507..113597 | 1680866549.6749706-CDS-A-nodosum_M_contig1144:113507..113597 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1144 113508..113597 + |
| 1680866549.683318-CDS-A-nodosum_M_contig1144:114737..114917 | 1680866549.683318-CDS-A-nodosum_M_contig1144:114737..114917 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1144 114738..114917 + |
| 1680866549.7554882-CDS-A-nodosum_M_contig1144:116033..116090 | 1680866549.7554882-CDS-A-nodosum_M_contig1144:116033..116090 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1144 116034..116090 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1144.9.1 >prot_A-nodosum_M_contig1144.9.1 ID=prot_A-nodosum_M_contig1144.9.1|Name=mRNA_A-nodosum_M_contig1144.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=175bp
MVRIEVCYFCSSKIYPGHGIVFVRNDSKVFRFCRSKCHKNFTRKRNPRKS KWTKAFRRAAGKEMAVDTTFDFEKRRNRPVKYDRETMGKTLLAMKKVKEV QAKREQRFFENRHRGAKTKEKAKIKADIKENIELLAPAATQDREKTLTTI TDKAKQQKASAAASKARVTMETED* back to topmRNA from alignment at A-nodosum_M_contig1144:104445..116090+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig1144.9.1 ID=mRNA_A-nodosum_M_contig1144.9.1|Name=mRNA_A-nodosum_M_contig1144.9.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=11646bp|location=Sequence derived from alignment at A-nodosum_M_contig1144:104445..116090+ (Ascophyllum nodosum dioecious) TGGGTGTTGATCGGCCCTTCATTGTCAGCCACCACACCGAGGGTAAAGGA
TGGTCAGAATAGAGGTCTGCTACTTCTGCTCCAGCAAGATTTATCCAGGC
CATGGCATCGTCTTCGTTCGTAACGACTCAAAGGTAAGATCACGACTAGA
CTATATCTACGCTATTTCTGCTATTTTAGCCCGTGATTTGGAGGCTATGC
GTACAGCATTATGTATCTAAGAACATCGAGCGACCGCTCTGTGTGGTTGT
AGACTTCCGGTCCATAGTCGTACAACAACCCGCGACCTCCATGGATTCGT
TGGAGTCTAGAGGCCTGGAGCACCACCCACTCTCCATGTGTCATTTCTCA
CTCTCTGTATGTAGCAATTGGGTGGTTCTTCAGCATTGATTTGTCCGGTA
GTGGGGCCTACTGTACCATAGCATAGATTTTCGCTCGAGTAGAGTAGTGA
TAACCTCGCATGCCACTATCGTACGGAGTAGTATGTATCGTCACACATAC
AGCGAGAGCATGGATCAACCGGGTAAGGTTGCCAAGCCTGCTCGTGGTCA
GCTGAACGAGAAAAATAATTTTTTCCTTGTCCCTGTTGGCGCCTGTGAGA
ATTTGGTCTCCCGAGAAAGGTTCAGCCGTCCCGTCTCGCGTCAGCCTGCT
CATCCCCATACTCAGGCCGAATCTGGTGTCTACTTACGGGATTCCTCCCG
AGTTCCGCGGCGGCGTCTATTTATTTATTTTTTATGTTAAAACTATTTTA
GTGCGGAGCTCGGGGTTCGATTCTTAACAAAATCAGGATTTTATTTTCTG
GCTTCCGTAGTGTAGCGGAAAGCGTGCGAACGTGAGTAAGTGAAGTTCAC
TAATTTATTTAAACCGCCATGCGCCATCCCGTCAGTCCCGAATTCATCGG
GTCACGCAGTTACGACCGATGGCGTTTACTGCCGAGAGTCTGCCGGCACA
TGTCCAGCAGTTCTCCAGGTAATTCGAATATCGGGTGCTTCCTTTTCGTG
TATCACCGTGGATAGACCAATCAATTCGCGCCTCTCTTTTACTTTCAACA
TGCCCATTTCATACCAATAGTGGGTGTGGGAAAGAGAGGAGAATATTAAT
TGGTCCATGGTGATCTGCCAAGGCAGCACCCGTTCGGAACTACCTTGAGG
TTTACTGGTCCTGTGCCGGCGAACTCTCGGCAGTGAACGCCATCGGTACG
CAATTGCGTGACCCGATAAACTCGGAACTGGCCCGATGGCGTATGGCGGT
TTCATAAATGGACGCCGCCGCGGAACTCGGGAGGAATCCCGTAAGTAAGC
ACCAGATTCAGCCTGAGTATGGAGATGAGCAGGCTGACGCGGGACGGGAC
GGCTGAACCTGTCTCGCGAGACCAAATTCTCAGGCACGCACGGGGACAGG
GGAATATTCATTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCAACCT
TACCCGGTTGATCCATACTCTGCTATATGTGATGACCATACATACATACA
TACATTGGTATGAAGTGGGCATGTTGAAAATATCGGAAGCGGTAGGTGAG
ATTGGTAACCTATTTAGCACGTTGAGGCCCATCGGCCGTAAGCGAGATAC
TGTTTGTACAAATAAACAAAAAACACGACCATGTCAGTTCAACAACTCCA
ACTCCGACACTGATATTTGCACGAGGAGCTTTTCGCTTTCTTCATCTATG
TACACACATAGCAAGAGTATGGATCAACCGGATAAGGTTGTCAATCCTGC
ACGTGGTCAGCTGAACAAGGAAAATGAATATTTCCCTGTCCTCGTTCGCG
CCTGAGAATTTGGTCTCGCGAGACGGGTTCGGCAGTCCCGTCCCGCGTCA
GCCTGCTCATCTCTATACTCAGGCTGAATCTGGTGCTTACTTACGGGATT
CCTCCCGAGTTCCGCATAGGGCTACGAGTAGACTTTAAGTAGTACAAGAT
CTGGTCTACACGAAGGAAGTTCGGCATAGGGCACCTCGTCAACAAGTGAT
TTTGAAATCTGCGGTACGGACTAACGCCCGATCTATAAACGATTTTTCTG
TTCCAAAGTTTGGAATGGAAGTTTGGAAAAGTTCGGGAAAAAAATCGGGG
AAAAAAAGGTCGAAACGTGCATTGAGCTGGTTTGGAGACGCTTCCATCGT
CTTCACGGCCGGACCCGTCTCGCGAGACCAATTTCTCAGGCGCGAACGGC
GTCAGGGGAAAAATAATTTTGCCTGTTCAGCTGACCACGACCAGGATTGG
CAACCACACCCGACCGATCCATACTCTGCCAAAAAGTGCTGGCGATACAT
ACATATACCTTCAAAATACACACTCCGCTTGTTTCATATTTTTTCATTCC
GCTACGGTCCCCAATAATGGCTACTCTAGACCTCAAATAGATACGGCCCC
TTGTCTGACGGGCTCCACATTGATTGATTGATTGATTGAAATGATTGAAT
TCTCACACAAGCTGATGTCAAAAATCCAGCCCATGGTCACAAGGTAGAAA
AACACTATTCGGAAGGAAAAAACTTGTACTACGTACTCTACATACAAAGA
GAAAACGGTAATGGTACAAAAATACTCTGATAGGAAAAAGCGACATCTCC
AAGGAAACAGAAAAAAAGGAAGAAACAGAAACGAAAAAGGACGCAGACTG
TCGTAACGAAACAGAACAAACAAACGTAACACCATATAAAGACAACACGA
TATCCGCCTGGAGGATACAGATTCGCTCGACTTGTGGCTAATGAACTATG
GCGAGCGAACCAGCACGAGCCGGCTTGCTTTGGGCTATCTTTTCATTTGT
CCTTCCCGTCACGTTCGGGCATACTACTACTACTGCATGCCGTAGTCTAG
CCCTGGCTTTCTCTGTAGCGATCTATTTCGCCATGAAACGTCCTGCCCCT
TGTTCCGCCGTCCTGCGCCATTCCCCCTTGTCCTGGGCTGCAGTTGTCCA
CTGGTCGGCATTGATGCCGAAAGCTCTGAGGTCGTCCAGGAAACACCTCA
TCCACTCTTTTTCCTCGCCCCCCACGCAGCCTGGCCCCCCACCAATTCTC
CGAAAATTACGCACTTCGGCAAGTCTCGTATCCTCCATGCGCGCCACAAA
CCCCGCAAACAAGATCCGCCTCCTGCGTAAAGTCGCCCCGATGCTCTCAC
TTCCCGTCTTGACAAGCGTGTCCAGATAGAATATCGGGTGGTCGGCGCGA
TCGTTCTTTCGCCAACCGATGCAGCGAGTCAGAAAGCTGTGGTGGACTCG
GCGCAGCGTGTCGGAGTTGCACGCGCGCGGGCTCCACGTGACGCAGCCTT
ACAGTATTGTCTCGAGTACATCGGCTCCAAGCATCCGGATTTTGAGCTGG
AGAGGAGCGCTCGGTCGGTCGTACAGTTCGAGGGTATACTTCCGGAAGCT
GCACCATGCGTTGCGTATGCGCCGATTGACCTCGATGGACAGGTCAGCAT
TGTGGTTGACGTTCCCCCCGAGGTATACGAACTCGTTCGTTTGGTTGTAC
ACCTGGCCCGCGGCCTCTACGCTGAATGTGGCGGTGGACGCCGGCATCCC
CTTCGTGCGTTAACACATGATCTCAGTCTTGGCCTCCGATACGGTGAGGC
CAAACGCCGCGCACACGACCACGATCACCTCCATCATCTTCCTCAGCTGC
TCGGGGGATTGCGAGACGACCCCGGCATCATCAGCGTAAAGCATGCCCCA
CAGCAGCGTCGCCAGGACTGGCTCTCCGGCAGTTGCTTCCCCCTGCCCCC
TTTTTCTTCCTCGGGTGCACCAAAGCGTCCGTGATGTCTTTGTCCGCCTT
GAAACGCGTGTAGGCCATGTTTATAACCACCGCGAAGAAGATGTTGAACA
GAAAGGGAGCACGCACGCACACTTGGCGAAGGCCCTGTTCCACAACGAAC
CACCCCAAGCACACCCTGTCATCGAGCCGCACGCATGGTCGCATACCATC
GTGGAATTGACAAATGACCAGAGATCATATTCTGGGGCACGCCAAAACGG
GCGAGTACTGTCCAGAGGAGGGTTCGATCAACGGAGACGTACGCTTTGGT
AGGGTCGATAAAGCATCCATACAACGTAATTTGTTTCTTTCGCACCAACT
CCTGTAACCGACGAATCACAAACATCATATCGGTGGTAGAACGGTTCGGT
TGGACACCACTCTGTTCCTCCGGCAGGATCCCCACGCGCTCGCAGTACTC
GCCGAGGCGGCGGCGATGATCTTCAGCAGTACCTTGCCGGCGTGCGCTAC
CAGCGAGAGGCCGCTGTAGTTGCCGCACTCTGCCCGATGCTTCTTTTTAT
GGAGCACCATGAGTATGGCATTTTCCCACTGCCGTGGCACCTCGCCCTCA
CTCCAAATACAAACGACGATATCGAGCAGTCTCCGGCGCAGGGCGGGATC
ACCGTTGAGGGTGATCTTGAACAGCTCAACGGAAACTCCGTCCGGTCCGA
CAGCCTTTCCGTTCGCCAACGAGCGGATGGCGCCTGTCAGCTTCTGCGTC
GTGGGCTAAACTTTTTGTGACATGTTCTCGGGCGACTGGCCAAGACCTTC
GGCGATGTTCGGGTCGAGCTTCGGTGACTTGGCGTTGAGGAAAGTGTGGA
ACCATCAGACCCGTTGTTCGCGGATGAGCTCAACGTCCCTCAGGAGTACA
CCATCCTCGTCTTTGGCGTACGTCGAGCTGCGGTCTCGCTTCCATTCCAG
ATTCATCGTCTTTAGATGCTTGTAGAAGCCGGCCTGGTCGCCTTCTCGAG
TGCGTGCTTCGAGTTTGCGGACGAAGTCCCAGAAGAAGCTCAGCACGGCA
GCCTTGCGAACGTTCCGGAGATTTTTCCAACCATCCTCAAGGCCTTTCGA
AGGTTGCTGTTGTGGGGTTCTGCGCGTAGGTGGCTCCTCGCCTCCTCTTT
CTGTTGCCATGCTGCGTTCATCTCAGCCTCCACACCGGGCCCTGCACACC
AACCCTGTGCTCCGCGCGGGCGCTTAAAACGCAGCGCCAGTTCGGCCGCA
GTGGAAAGCATGACGTCCGCCATGTTGGTAGCGATGTCACTGATGCAGGT
GCCATCGGGGATTGGTGGTCGGGCGGCAACCATCGCGTTTGCAACCTGGC
ATTGAAGGCTCGGGTCAGCCATCAACCGCCTGAGGTCGACCGTCTTCGGA
GTTTCCTTGGTACTGTTCCTCGTCCTCCGGTTTGGTGCGGACTTGCGTGG
GATGCGGATGTCTGACATGGGCTCCAAGAGTCAGCCCACGGCATAGACTG
TGGCTGGCGTGATGTCATCCCGCTCAAGGGAGTTTTCCCCCGAAAAGTGG
AGAAAATGGGACTCTCGGGATTATGCCGCTCGACCTCCAAACATGCTGCT
TTAGAATAGGATAACGTTCGCTGTGGAGCTCGTGGTGAGGCCAAACCTTA
AAGCCTTAAAGCGTGATTTAGAAAGGAAAGGCAACGAGACAAGCTTGCAG
CGGGCTTCGGACAATGGCACAGCGTATGGCTGCCTCGGTGATGATCCTTT
TGGTGTGGAGCAGTATGAGACGAGGTGTTCCAAGTAGGCCCAGGGAGGCG
TATTTTCCAAACTTTTTCAACTTTGGAATGGACGAAAAGGCTTGGAACGC
CCTGTTCTTGGCTTTGGAAGTGTTTCCGCGGGAGATTTTTTTTGGAAGTT
TCAGAAAAAGTTTGGACAAGCCCGGAAAATATTTTCTCGTTTTGCGTACG
ACGAAATCGTGCAGAAATCAAAAAGAAACCCTCGGACTTGTGTTGCAACC
CTGGCAAAGATGGCGGGAGATCCCAGCCACAAACAATCCCACTTTTCGGA
TCGTGGGAGCACTCTGGAGCTGGAGCTCACATCAGCCCTGCCCATGTAAA
AAAAGAGTTTGTATATTGTAAACAATGTTTTGCCATTTTTAACGCAAGCA
ACTTAAAAACCTCTACGATAGAAAAAATAAAATGATTATTAAAATCAGGA
AAAACTGTATTTTGTTCCAAGATTATGCTCGTAAATTATTTATTTTTTAT
TTATATTTTGGATTTGCAAAATCATTTTATTTTGGATTATGCCCACAATC
CCGAGATATGGCGTTTTGTTCTAGGGACCGCTCTGTACCAACCAGGGTCA
CAACTCGTCCTTTGCCTCCCGGAAAGTACCTGCGTGAGCAAGCTAGAGAC
CGGCAGACTTGACAGCACAGTACTGAGCTGTTCCGCACTGCGTCTGATGT
TTAGGTCAATGTGATGCCGCGTCATAATCTGGCCCTTGTCAACATGCCCA
TGCTTTTTGGCGGAACCTACCATAGAGCTCTATTCTTTTGTATATGTATG
TATGTACTGGGTGCCGGGTATGTATGCATGGTCATCACATATAGCAAGAG
TATGGATCAACCGGGTAAGGTTGCCAATCCTGCTCGTGGTCAGCTGAACA
GGGAAGATGAATATTTCCCTCTTCCCGTACGTGTCTGAGAATTTGGTCTC
GCGAGACGGGTTCAGCCTACCCGTCCCGCGCCAGCCTGCTTGTTCTCCAT
CCTCAGGCTGAATGTGGTGCTTACTCGCGGTATTCCTCCCGATTTCCGCG
GCGGTGTCCATTTTATTTATTTAAACCGCCATACGCCATCGGGTCAGTCC
CGAGTTTAACGGGTCACGCAATTGCGTACCGATGGTGTTCACTGCCGAGA
GTCCGCCGGCACAGGGCCAGTAAACCTCGAAGTTAGTTCCAAATGGGTGC
TGCCTTTGCAGGTCACCATGGACCAACTAATATGCGCCTCTCTTTCCCAC
ACCCACTAGCTCTATTGGATATGAAGTGGGCATGTTGAAAGTACCGGCGG
CTATAAAGGTAAAATAAGCAACAGTAATAACGATTAATAGACTATAGCAC
TTTGTACTACAAATTAGTATACCTGGTACTGCAGTACTATGTAGTATTAA
TAGGCTCTGTATAGGTATTATAGTTTTAACATTGATAGCATCATGTATTA
TTGCAGCTTTGACGAATAATGCCTATTTCTATATTAATATTACAGTGTTA
TGAGTGTCACCTCCGCATCCCACGATATGTTGCCAATCTTGTGTAAAGAG
TTCGGTACGATTGGAGGGTTGGAGGCGCTGAGGCACGCCAAGAACAAAGC
CTGGGAGGAAACTGACTCCTGGTGTGTTCTTCCATAATGTCCGCCTTCTT
TCAACATGCCCACCTGATACCAATGGTGGGTGTCGGACAAGAGAGGCGCA
TATTAATTGGTCCATGGTAACCTGTAAAATGGTAGCACCTGTTGCTGGAA
CTACCTTGAGGACTACTGGCCCTGTGCCGGCGGACTCTCGGCAGTGAACG
TCGTTGGTACGCAATTGTGTGACCCGATAAAGTCGGCACTGACCCAATGG
CGTATGATGGTTTAAATAAATAAATGGACGCCACAGCGGAAATCGGGAGG
AATCCCGTGAGTAAGGACCAGATTCAGCCTGAGTGTGGAGAATGAGCAGG
CTGACGCGGGACGAGACTGCCGAACCCGTCTCGCGAGACCAAATTCTCAG
ACACGAACGGGGACAGGAAAATTTAATCTTCCCTGTTCAGATGACCACGA
GCAGGATTGGCAACCTTACCCGGTTGATCCATGCTCTGCTATATGCGATC
ACCAATTTATTTCCCGTTACGTTTTCGGACCATAATCCTTTTTTTTCTGA
CCAGTTGCAACCTGGGTGCTCGAGATACGGAGCACCCATCCTGTCCCCCA
CGCCACCTCGTTTTTATTTATTTACTGGTATGTATGCCGCTCGGGTGCCC
GCCCCTGTTTTTCAAACATAATCTTCACAAAACTTGCACAAGGTTCTTTA
AAAAAAAACAAAAAAAACGGGACGACGGCCCTTTTCTTTTTGTTCATCTG
CCCCTTCTTTGGGATGCAGCTAATGCAGACATTGTTATTGATACATTGGT
GTTGATATTGATATATTGTTATTGATACAGTACAGTTGCCGGTCGCCCCG
GTGGTTCGGTTGGTAACCTCGAAACCTTCTGACGTTGGGATGTGAGCTCG
AACCTCGGCGCAGTCCCACGAACTGGGATTTTTCCTCATCATGCCCAACA
AGTGGAGAGCGATTATTTCGTGGGTACATGAAATTGGACTTGACGGTTGA
GGAGGGAAAGGGACGGCTGAATCCTTCTCGAGATCAGAAGTAAGGCAAGC
ACCGCAGAAGGAAGGTGGAGAAATACTGTGTGACCCCGGCGGGTGCGTCT
ACAAGCCTGACGTCCAGAATAAATGGGATGACAACACACACACACATCAC
TCATTATATATACAGCGTGGTCATCACCCTACGGACAAGGGTTAATGCTG
ACCGTAGCCTGCCGCGATCGTCCCCGTTCGTTTCCTCGCCTGGGACACAC
ACACGCAAATACAGGTGTTTCGATTCTGCAGATCCAAGTGCCACAAGAAC
TTCACGAGGAAGCGGAATCCTCGAAAGTCCAAGTGGACGAAGGCGTTTCG
GCGAGCGGCGGGCAAGGAGATGGCGGTGGTGAGCGCCCTCGCCGCCACAC
GTGTTTGCGACACACGCAGACCTTGGAAAAGTATTGTCCTCGTGTATTCA
TGGCATGATCTGGCTGTTTGCTTGTTGCTCTGTTCTATGCGGGCTTGTGA
AGATGTAAAGTGACACTCGAAGCTTTGTGTCTTATCCTTTGAGAATGTCT
CATTTACCCCCGGGGACCGAAACAACCCACCCCCCTTCTGTCACACCCCT
CCGCTCACCGACGCGACTCTCCTCTCTCTCGCTTTCTCTCAATAATACAA
ACTGTATTCTATTAGTAGGGCATTGGATAAAGATCCAGCCAATAACCGTG
TAGACTCTGCGATGCGTACAAAGGTGGCGGAGAGGAGAAATGTTGTGGAG
GAAGGCGTTATTGCCCGACCGTTACGTCAAGCTGTGTATCATTCACTCTG
TTGTGTGTTCCCAACGCCCATCGCTAGCGATGAAGCAAGCACCTGGTGCC
TCGAACGCAAGATAGAGGGATAGCGAATCGGCTCTTCGTTCCGTGCCGCT
CTTGTCTCTACCCTGATTGGCTGATTGGCTCTCCTCTACTTCGCCTCGTG
CTTACTTTTGCAGGACACCACCTTCGACTTCGAAAAGCGGCGCAATCGTC
CGGTGAAGTACGACCGCGAGACGATGGGGAAGACGCTCCTCGCCATGAAG
AAGGTGGGCCAATCTAAGATGCAGCGTGTGCAGTTGCTCGGGCGGGAACC
AGCCAGTCAGAACCGAGCGGCGTGTCAGATGTCCCTGGTTGTTTCGTGGA
TTCGGCCCGTAGATTGGTTCTTCCCAGTTGCCGCTCGCTCTTGTTTTGGT
ATTTAGTATTGTTTTGGAGGTGAGGCGGCAGAGGGGGCGCAGTGTCTAGT
GGGAAAGGTCTACATTCCGTACAGAAGCACGCTTTCCCCTAGACAAACAT
GCTGGGTTTCCAAGGCCCGGACAGAAGCTTCTCGAGTTTCTGTTTGCTCC
GAGCTCAATTGATTGAGACGTGGGCGCTTAACAAACCGTGGGGTATTGCG
AACGAAAAGGTCTTACTATCGCTTTAGTTTGTTATTAAGGGAGTGCGCAT
GACGTGCCCATCCCGTACAGAACCTCAAGCAGCAGGTACCAGCAGGGAAA
ACGTCTTCATGTTCATCTCTTAGATGTGGCATAACGTGTTTGGTACAATT
TTTAATTTATTTTAGTTTTTTATTGCGATGCAAGTTCAGCACTCTTACAA
CTCATCAACCAATGGTTGGATTTTACATACTCATGCTTTCTGCTACGTTG
GGACGTGGGGATTTTCTCCAGAATACAAAACCAAAAAAAATCCTGCGATT
GATTCAAAGAATCGACTTCAACTCACGAGGGACTTCTGCACGACAGAATC
AAAGCACCGCAGAAGGAAGGTGGATTAAAAATCCTGTGTGACCTTCCTCC
TGTGTGGTGTGATGTCAGAATGGATGGCTACCCACTATTTTTAATAATAG
ACCATTCGGGCTGTTAACGGGTGCCTGGTACATGAATAGCCTTGACCACG
GTTGTGTCCCAGATGTCTCCCTGTAGCACGTTACGTCTCTCCGACAGCCC
AACGCTCTTCGGCAACTGCGGGAGTCACAATTTACAAAGAGGCAACAGAT
TTGTATTTTGTTCCATCTCATCTCGGGTTTTTGAACAAAAATTCAACCCC
TTCCAGCCCTCCCCCCGAAAAAAAGCCTCTCTACAAAGAAGACCCCCAAC
CCGAAAACAAAACTAAACAAAGAAACACACAAGAAAGAAAATACCAAGAA
CGTTCTTGATGTATTTGCCCTGGCGCGCTTTTTTTTTTTAAAGGTGAAAG
AGGTGCAGGCAAAGCGGGAGCAGCGGTTCTTCGAAAACCGACACCGCGGC
GCGAAGACCAAGGAGAAGGCGAAGATCAAGGCCGACATCAAGGAAAACAT
CGAGTTGCTCGCCCCCGCGGCGACTCAGGACCGCGAGAAGACGCTCACGA
CCATCACGGACAAGGCCAAGCAGGTGATGTGGAAAACCTTGACACTCTCC
CCCGCGCCTTAGAAGCGGCAAGTTCCGTCACCCCCTGCCTGCGTTGGCGG
CGTGGCAAAGCTGCAGGGAAATACAGAAGGGTGTTATGTATCCCTCACCC
CACCCTACTGTGTTCGAGGTTACCGTGCCTTGTGAAGTGTTGGTTTCGCG
CTCTGTGGTGGCGATGGATTTGTTGCCTTGTTGAGGTCGGGAGAAGAACG
CGAGGGGTCTGGCGGACGAGAATTGAATCAATGAATTGAATGAAGCGGAA
AGATGAAGGGAGTGAATCTTGGATCGAGGAGTAATTGGCCCCTCCTAGCC
GCCGGTACTTTCAACATGCCCACTTTGTAACAATAGTGGGTGTGGAAAGA
GAGGCGCATATTAATTGGTCCATGGTGACCTGCCAAGGCAGCACTCGTTC
GAAACTATCTTGAGGTTTACTGGCCCTGTGCCAGCGGACTCTCGGCAGTG
AACGCTACGGTACGCAATTGCGTGACCCCATAAACTCGCGACTGACCCGA
TGGCGTATGGCGGTTTCATAAATGGACGCCGCCGCGGAACTCGGGAGGAA
TCCTGTAAGTAAGCACCAGAATCAGTCTGAGTATGGAGATAAGCAGGCTG
ACACGGGCGGGACTGCCGAACCCGTCTCTCTACCAAATTACCAGTCCCGA
ACGAGGGCAGCGAAATTTTCATTTTTCCTGTTCAGCTGACCACGTGCAGG
ATTGGCAGCCTTACCCGGTTGATCCATACTCGGCTGAACCCGTCACACAA
GACCAAATTCTCAGGCACGCACGGGGAGAGGGGGATATTATTTTCCCTGT
TCAGCTGACCACGAGCAGGATTGGCAACCTTACCCGGTTGATCCATACTC
TGCTACATGTGATGACCATACATACACACATACACATATGTGTGACCATA
CGTACATAAAGAGAGCTGCTCCGCCTCCTTAGATCATGAGAATATATGGA
ACACACATCAAATAGAGACATTACAGAGACAAAAAGTGACCGCATTTGCC
TCTTACGCCTGTTGTACATGTTCCGTGTTTTGCCTCTTACGCCTGACCAA
TCCCCCCCCCCCCCACTCCACGCTCCCTTAATAATCGAGCAGAAAGCCTC
CGCAGCAGCATCGAAAGCCAGGGTGACGATGGAGACGGAAGACTGA back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig1144:104445..116090+ >mRNA_A-nodosum_M_contig1144.9.1 ID=mRNA_A-nodosum_M_contig1144.9.1|Name=mRNA_A-nodosum_M_contig1144.9.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=525bp|location=Sequence derived from alignment at A-nodosum_M_contig1144:104445..116090+ (Ascophyllum nodosum dioecious) ATGGTCAGAATAGAGGTCTGCTACTTCTGCTCCAGCAAGATTTATCCAGG CCATGGCATCGTCTTCGTTCGTAACGACTCAAAGGTGTTTCGATTCTGCA GATCCAAGTGCCACAAGAACTTCACGAGGAAGCGGAATCCTCGAAAGTCC AAGTGGACGAAGGCGTTTCGGCGAGCGGCGGGCAAGGAGATGGCGGTGGA CACCACCTTCGACTTCGAAAAGCGGCGCAATCGTCCGGTGAAGTACGACC GCGAGACGATGGGGAAGACGCTCCTCGCCATGAAGAAGGTGAAAGAGGTG CAGGCAAAGCGGGAGCAGCGGTTCTTCGAAAACCGACACCGCGGCGCGAA GACCAAGGAGAAGGCGAAGATCAAGGCCGACATCAAGGAAAACATCGAGT TGCTCGCCCCCGCGGCGACTCAGGACCGCGAGAAGACGCTCACGACCATC ACGGACAAGGCCAAGCAGCAGAAAGCCTCCGCAGCAGCATCGAAAGCCAG GGTGACGATGGAGACGGAAGACTGA back to top
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